Lsi05G003230 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAATTGCAGCTCAAGTCTTCTGCTCACAAGTTCTATGAATTTTTCAAGAACAAAATGGACTGTTTCATTCAAATGTTCCCTCACATTTTTACAAGCTACAAAATTGTCGAAGGAAATGGTTTTTCTCATGGCAGCGTCATCCACGTAAAATATAACTTAGGTGAGGATATTTTATTTACCATCATTTTTCCAACTTTTATTTTATTTTGGTTCGTAAACTTTCAAATACTCTATTTTCATGTTTCAACTTTGAACGTGATTTAATTTTAAGCCCTTATACATATTCACTACACTCGCTATTATTTGTATGTATGTATGATCAAAGTTTAGGATATCTTGCTTCTTCTTTTTTCGAATTCAACAAATATGCGTGAGAATCAAGCTTTCAATCTTACACGAATGTATAAATGTCTTAACCTGTAGAATTATATACACATGATGGTGAATCTAATACTACATATTGAGAGAATGAAATTGTTTATATCTACACATTTAAATAAAATATATTTTTGGTTCAATTACATAAATTATTCAAATAATTATTATCCAAAATATATAGCAAAATTTTCACAAATAGAAAAAATGTCAAAGCATTTACATAAAATAGCAAAAAAAAAAAAAAAAAAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACACTGATAGACATTGATAGACTTCTATCAGCATCTATTAGTGATAGACTTCTATTATTTCTATCACTGATAGACCTTGATAGACTTCTATCAGCGTCTATCCCAACTATCTAAAAATTTTGCTATTTTGTGTAAATAATTTTCCTTATTTTTCCATTTTTTAAATTTGCCCAAATATATATGTACCAATAGCTTTCTTTATTCAAGCTTTTAAGTTCCTTAATAGATTTAGAGTCCTCTTTAGAATACCTTCATATTTTAAGCAAAATTTCTTAAATGTTTTAAATAAAATTTTGTTTATTTCTTACATTATTTTAAGATCATCACATTTTAATTACAAGTATATTTTGTTTCTTACTATATCTTTGAAAACAAATCAGATAATCACATAAAAGTCATTAAGTGTTTTCAAAATTAGCTTTTAAATTAATTCAAAAATTTATAAGTGCTTATTTATTGAGATTAAGAAAAAAACACTATTGACTATCTAAAATAATTATATTATATTTAAATTATAAAAATTGATTTTTGTCTAGAAAGCATTTTTGTTCAAAATTATTCCAAACAAACCACTAACACTATATGATACAACAAAAAACAGATTATAACTTGAGATCGTTTTCTCCGCCCCTCGTATTTAATCTAATACCTTTGCCAAATAAAAAAAAAAAACTTACACGACATCATATTATTCTTGTTTATATATATATATATATATATATATATATATTTGAGTTCAACCTTAGGTGTGAGATTTGGTAGGAAATTTGAAAACATAATTTTAAAATGAAGAGATACAATGAAAATATAAATGTATTTCATGCCTTCAATATGTGTTTAGTATAATGGATTCAAAAATTAAATTCCAATTGAAACAAATTTTCAAAATATGTTTGATAATATATCTATAAACCATAAAACTAATTATAATTACTCACTAAATATTAGGTTGAATATAAACTATTATTGATAATATATGAACTTGTTTTATGTTAAAAATTTTGTATAATTTTAATTTAACAAAAATAATTGAGTTTATAGCATGAAGTACTATTATTGTTGTTGTTTTTATCTTTTCTATTATAATTCTCTACATTTCAAAATTTGAAATTGAAATCTGGATACACAAAAGAGATAAAAATATCGTTTTCAGAATTTGCACTGTTTGGATTATAAAATGCAAAAACAATTTTCGAAAACAGAATTCGAACGGCCTACCAAATGCAGATTTGTCGAACTCAATGAAACTGAAAACATAAAGTAGAATCTAAATTGCCTATATTTGCAAATTAGAATATTTTGTATAAATATAGCAAAATGGCAATAATTTCATATATAGATTATACTTTGTATGAATTGGCCATTTAGATATACTTGTTATATCAATTTTCATATATAGATTGTTATAGAAAAATTATAAAAGATATTTTCATATATAGCAAAATGGCCAACTTATTTACAAATATAACAAAATAGTAAAAAGTTTCCTCATATGAAAACATACTATTTTGCTATATTTGAAAATATTTCCACAAATTTGTCATTTAAAACAACTTCTCTAATAAAAAAAATGAAAAATGAGATTTAAATTTTTTTCCCTATATTTCCAATTTTTAAAAACCATTGCTCTAGCTTTGCTTATACCTTTTTTTTTCTCTCTCTCTCTCTTGTTACCTATTACAATTTCCCTATTACTTATTATATATTGTATACACACCCTTTACAACTTACTATCCATCCAAGCTTTTTGGACTTCAATTCTTACCCTCTTTTTCTTGTTGTATGGAAATTACATAGGTAGCCCAGCAGAGGCAAAGGAGAGGCTAGCCATTGATGATGCTAACAAATCAATAACTTTTGAATTCCTTGAGGGAGATCTATTCAAAGATTTTGAAGTGTTCAAAATGAAAATTCAAGTTTTTGAGAATGGTAGCAATGGAAGCTCAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTCCACCACAAAACTATCTCCTTTTTGCAGCTAAAACCAGCAAAAGCCTTGATGATTACCTTTGCAACAAC AAGCTTGAAAATGGCTCAGATTGCTAAGATCTCAGAGCAATTGCAGCTCAAGTCTTCTGCTCACAAGTTCTATGAATTTTTCAAGAACAAAATGGACTGTTTCATTCAAATGTTCCCTCACATTTTTACAAGCTACAAAATTGTCGAAGGAAATGGTAGCCCAGCAGAGGCAAAGGAGAGGCTAGCCATTGATGATGCTAACAAATCAATAACTTTTGAATTCCTTGAGGGAGATCTATTCAAAGATTTTGAAGTGTTCAAAATGAAAATTCAAGTTTTTGAGAATGGTAGCAATGGAAGCTCAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTCCACCACAAAACTATCTCCTTTTTGCAGCTAAAACCAGCAAAAGCCTTGATGATTACCTTTGCAACAAC ATGGCTCAGATTGCTAAGATCTCAGAGCAATTGCAGCTCAAGTCTTCTGCTCACAAGTTCTATGAATTTTTCAAGAACAAAATGGACTGTTTCATTCAAATGTTCCCTCACATTTTTACAAGCTACAAAATTGTCGAAGGAAATGGTAGCCCAGCAGAGGCAAAGGAGAGGCTAGCCATTGATGATGCTAACAAATCAATAACTTTTGAATTCCTTGAGGGAGATCTATTCAAAGATTTTGAAGTGTTCAAAATGAAAATTCAAGTTTTTGAGAATGGTAGCAATGGAAGCTCAGTTAATTGGTCTATAGAATTTGTGAAGGCAAATGAAGATGTGGCTCCACCACAAAACTATCTCCTTTTTGCAGCTAAAACCAGCAAAAGCCTTGATGATTACCTTTGCAACAAC MAQIAKISEQLQLKSSAHKFYEFFKNKMDCFIQMFPHIFTSYKIVEGNGSPAEAKERLAIDDANKSITFEFLEGDLFKDFEVFKMKIQVFENGSNGSSVNWSIEFVKANEDVAPPQNYLLFAAKTSKSLDDYLCNN
BLAST of Lsi05G003230 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 2.1e-14 Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 1
BLAST of Lsi05G003230 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 1
BLAST of Lsi05G003230 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2) HSP 1 Score: 73.9 bits (180), Expect = 1.5e-12 Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 1
BLAST of Lsi05G003230 vs. Swiss-Prot
Match: MLP15_PAPSO (Major latex protein 15 OS=Papaver somniferum GN=MLP15 PE=2 SV=2) HSP 1 Score: 72.8 bits (177), Expect = 3.3e-12 Identity = 42/147 (28.57%), Postives = 72/147 (48.98%), Query Frame = 1
BLAST of Lsi05G003230 vs. Swiss-Prot
Match: ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum GN=MLP146 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.1e-11 Identity = 41/147 (27.89%), Postives = 73/147 (49.66%), Query Frame = 1
BLAST of Lsi05G003230 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 3.0e-52 Identity = 112/151 (74.17%), Postives = 118/151 (78.15%), Query Frame = 1
BLAST of Lsi05G003230 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 3.3e-51 Identity = 109/151 (72.19%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Lsi05G003230 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 1.4e-46 Identity = 99/151 (65.56%), Postives = 113/151 (74.83%), Query Frame = 1
BLAST of Lsi05G003230 vs. TrEMBL
Match: A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 2.5e-35 Identity = 81/153 (52.94%), Postives = 105/153 (68.63%), Query Frame = 1
BLAST of Lsi05G003230 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1) HSP 1 Score: 139.0 bits (349), Expect = 4.2e-30 Identity = 77/153 (50.33%), Postives = 97/153 (63.40%), Query Frame = 1
BLAST of Lsi05G003230 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34) HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15 Identity = 49/144 (34.03%), Postives = 77/144 (53.47%), Query Frame = 1
BLAST of Lsi05G003230 vs. TAIR10
Match: AT1G70830.1 (AT1G70830.1 MLP-like protein 28) HSP 1 Score: 73.9 bits (180), Expect = 8.3e-14 Identity = 46/147 (31.29%), Postives = 74/147 (50.34%), Query Frame = 1
BLAST of Lsi05G003230 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31) HSP 1 Score: 73.9 bits (180), Expect = 8.3e-14 Identity = 45/147 (30.61%), Postives = 76/147 (51.70%), Query Frame = 1
BLAST of Lsi05G003230 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43) HSP 1 Score: 69.3 bits (168), Expect = 2.0e-12 Identity = 41/147 (27.89%), Postives = 74/147 (50.34%), Query Frame = 1
BLAST of Lsi05G003230 vs. TAIR10
Match: AT1G23120.1 (AT1G23120.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 67.8 bits (164), Expect = 6.0e-12 Identity = 38/144 (26.39%), Postives = 71/144 (49.31%), Query Frame = 1
BLAST of Lsi05G003230 vs. NCBI nr
Match: gi|778680249|ref|XP_011651277.1| (PREDICTED: major latex protein 146-like [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 4.2e-52 Identity = 112/151 (74.17%), Postives = 118/151 (78.15%), Query Frame = 1
BLAST of Lsi05G003230 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 4.7e-51 Identity = 109/151 (72.19%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Lsi05G003230 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus]) HSP 1 Score: 209.1 bits (531), Expect = 4.7e-51 Identity = 109/151 (72.19%), Postives = 117/151 (77.48%), Query Frame = 1
BLAST of Lsi05G003230 vs. NCBI nr
Match: gi|659114440|ref|XP_008457055.1| (PREDICTED: MLP-like protein 34 [Cucumis melo]) HSP 1 Score: 196.4 bits (498), Expect = 3.1e-47 Identity = 100/151 (66.23%), Postives = 114/151 (75.50%), Query Frame = 1
BLAST of Lsi05G003230 vs. NCBI nr
Match: gi|449464138|ref|XP_004149786.1| (PREDICTED: kirola [Cucumis sativus]) HSP 1 Score: 193.7 bits (491), Expect = 2.0e-46 Identity = 99/151 (65.56%), Postives = 113/151 (74.83%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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