Lsi05G003210 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G003210
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Major latex protein
Location	chr05 : 4090919 .. 4092354 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCTAAGATATCAGAACAGCTGCAGCTGAAATGTTCTGGTGAAAAGTTCTATGAGCTTTTTAAGAACAAAATGGAATGTTTTTGTCAAATGTTCCCCAAAAACATTCAAATCTATAAAGTTGTGGAGGGAAATGGTTTTGCTCATGGCAGCATTGTCGACTGTAAATATGACCTCGGTCAGATTCTAAACCCTAAACTCTAAACCCTAATTCAACCGTATATCTAACTTCCTTTCTCTATTATATTCAAAATATTGTTTAAGCTTTACTTCTTATAATTTTCGAAAATTATTATAAATAGAAAAAAAAATATCAAACTATTTATAAATATAGAAAAATTTTACTGTCTATCAGTAATAGACTGCGATAGACCGCAATAGACTTCTATCACTGAGCAATAGAAGTTTATCGCACTATAAAACTTTTCTATATCTATAAATATTTTGACTCATTTTTCTATACTTGAAAACAACCCTATAACTTTTCTAGAATTCATTACTACTATTGTTTGGTTATTACAAAACATTTCATGTATCCATGATCAAGTTTGGAACATGAATCTAATATTACTTGGTTGTGACAATAAACTATCTATCTCTAAATAATAATATACTTCATCTTGTTTAGGTTCTAGTACATTAAATACTATTTCTAGGCACTTCATATTAATGAAGATACCATCTAATAAATTAAACTTGCCACCAAAATATTTAATTTGTTTTCACAATTTTGTAATCAACTCTCTTTAGTGTTTTTATACATAAAAAAATCGAATATACAAATTATTAGATAACATGGGTTCCATCTCAAAACTAATTAATAATGGGAGAGGAGTAGTCTCTATACGTCTTCTAAAGATATTGTGAGGAGGTTCCCTTAATTTTTGTAAAATGTGTAATCTTCCACATGCCATCTCAAAATGGTATTATTCTCATATTAGATTCCAATTTTTTGTTTGGACCGAATGTCTGTTTAAACTTCATGGTCTCTAATACCACATTAGATAACATGAGGTGTTGATTAAGATTAATATAGCTCATGTGTAGGGCTTTGCTTCGTAAATTAGATTAAATATATCTACGCTATAAGGCTTAAATAATCAACTCAAGCTTTTAGATTCCGTGACGATTCTAAGTATTATTATTTTTAATTTCTTTGGAACACAGGTATCCCACTAAAAGCAAAGCAGAAGCTACATATGGATGACCCTAATAAGACAATAATTCTAGAATTTATTGAAGGAGATTTGCTTAGAGACTTTGAGATGTTGCAAGTGAAAGGACAAGTTACTGATGGTGGAACCAAAGGCTCAGTTAAATGGTCAGTGGAATTTGTGAAGGCAAATGAAGATGTTGCTACACCACATAACTATCTCCAATTTGCACTTGAAGTGACCAAAGGAATTCAGGCTAATTACCTTTGCAACAATAATTGA

mRNA sequence

ATTTCTAAGATATCAGAACAGCTGCAGCTGAAATGTTCTGGTGAAAAGTTCTATGAGCTTTTTAAGAACAAAATGGAATGTTTTTGTCAAATGTTCCCCAAAAACATTCAAATCTATAAAGTTGTGGAGGGAAATGGTTTTGCTCATGGCAGCATTGTCGACTGTAAATATGACCTCGGTATCCCACTAAAAGCAAAGCAGAAGCTACATATGGATGACCCTAATAAGACAATAATTCTAGAATTTATTGAAGGAGATTTGCTTAGAGACTTTGAGATGTTGCAAGTGAAAGGACAAGTTACTGATGGTGGAACCAAAGGCTCAGTTAAATGGTCAGTGGAATTTGTGAAGGCAAATGAAGATGTTGCTACACCACATAACTATCTCCAATTTGCACTTGAAGTGACCAAAGGAATTCAGGCTAATTACCTTTGCAACAATAATTGA

Coding sequence (CDS)

ATTTCTAAGATATCAGAACAGCTGCAGCTGAAATGTTCTGGTGAAAAGTTCTATGAGCTTTTTAAGAACAAAATGGAATGTTTTTGTCAAATGTTCCCCAAAAACATTCAAATCTATAAAGTTGTGGAGGGAAATGGTTTTGCTCATGGCAGCATTGTCGACTGTAAATATGACCTCGGTATCCCACTAAAAGCAAAGCAGAAGCTACATATGGATGACCCTAATAAGACAATAATTCTAGAATTTATTGAAGGAGATTTGCTTAGAGACTTTGAGATGTTGCAAGTGAAAGGACAAGTTACTGATGGTGGAACCAAAGGCTCAGTTAAATGGTCAGTGGAATTTGTGAAGGCAAATGAAGATGTTGCTACACCACATAACTATCTCCAATTTGCACTTGAAGTGACCAAAGGAATTCAGGCTAATTACCTTTGCAACAATAATTGA

Protein sequence

ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLGIPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKGSVKWSVEFVKANEDVATPHNYLQFALEVTKGIQANYLCNNN

Homology

[Close]

BLAST of Lsi05G003210 vs. Swiss-Prot
Match: MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-16
Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 1


Query: 4   ISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DLGIP 63
           +  ++++K S EKF+ +F  K     +  P NIQ   + EG+    GSIV   Y   G  
Sbjct: 169 LETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEA 228

Query: 64  LKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKAN 123
             AK+++   DP K +I    IEGDL+++++   +  QVT   GG+   V W  E+ K N
Sbjct: 229 KVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKIN 288

Query: 124 EDVATPHNYLQFALEVTKGIQANYL 145
           E+VA P   LQFA+EV+K I  + L
Sbjct: 289 EEVAHPETLLQFAVEVSKEIDEHLL 313

[Close]

BLAST of Lsi05G003210 vs. Swiss-Prot
Match: KIRO_ACTDE (Kirola OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 1.2e-15
Identity = 43/144 (29.86%), Postives = 78/144 (54.17%), Query Frame = 1


Query: 3   KISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLGIP 62
           K+ +Q+++   G  FYE+F+ ++    +M P NIQ   ++EGN    GS++  KY +   
Sbjct: 6   KMVKQVEILSDGIVFYEIFRYRLYLISEMSPVNIQGVDLLEGNWGTVGSVIFFKYTIDGK 65

Query: 63  LKAKQKL--HMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKGSVKWSVEFVKANE 122
            K  + +   +D+  K++  + +EGDL+  ++   +  QV   G   SV W+  + K  E
Sbjct: 66  EKTAKDIVEAIDEETKSVTFKIVEGDLMELYKTFIIIVQVDTKGEHNSVTWTFHYEKLKE 125

Query: 123 DVATPHNYLQFALEVTKGIQANYL 145
           DV  P+  + F +E+TK I+  +L
Sbjct: 126 DVEEPNTLMNFCIEITKDIETYHL 149

[Close]

BLAST of Lsi05G003210 vs. Swiss-Prot
Match: MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.5e-15
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           + K+   +++K S EKF+ +F  K     +  P NIQ   + EG+    GSIV   Y   
Sbjct: 185 VGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYVHD 244

Query: 61  IPLK-AKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFV 120
              K AK+++   +PNK +I    I+GDL+++++   +  QVT   GG    V W +E+ 
Sbjct: 245 REAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYE 304

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYL 145
           K +E+VA P   LQF +EV+K I  + L
Sbjct: 305 KISEEVAHPETLLQFCVEVSKEIDEHLL 332

[Close]

BLAST of Lsi05G003210 vs. Swiss-Prot
Match: MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2)

HSP 1 Score: 75.1 bits (183), Expect = 7.2e-13
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 3   KISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DLGI 62
           K+   +++K S  KF+ +F  +     +  P  IQ  ++ EG+    GSIV   Y   G 
Sbjct: 23  KLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGE 82

Query: 63  PLKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKA 122
              AK+++   +P K +I    IEGDLL++++   +  QVT   GG    V W VE+ K 
Sbjct: 83  AKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKI 142

Query: 123 NEDVATPHNYLQFALEVTKGIQANYL 145
           ++ VA P  +L F +EV+K I  + L
Sbjct: 143 DDKVAHPETFLDFCVEVSKEIDEHLL 168

[Close]

BLAST of Lsi05G003210 vs. Swiss-Prot
Match: MLP43_ARATH (MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.2e-12
Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DL 60
           + K+  ++++K S +KF+ +F  +     +  P  I   ++ EG+    GSIV  KY   
Sbjct: 8   VGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYVHD 67

Query: 61  GIPLKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTDG-GTKGSVK-WSVEFV 120
           G     K K+   DP K +I  + +EGDL+ +++      QVT   G  GS+  W +E+ 
Sbjct: 68  GKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYE 127

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYL 145
           K +E+VA P   LQF +E++K I  + L
Sbjct: 128 KISEEVAHPETLLQFCVEISKEIDEHLL 155

[Close]

BLAST of Lsi05G003210 vs. TrEMBL
Match: A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.2e-40
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KISEQ+QLKCSG KFY+ F NKM+   QMFP  +  YK++EGNGFAHGS++  KY++G
Sbjct: 18  IAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIG 77

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKA 120
            P + K++L  DD NK+I  E  EGDL RDFE+ ++K QV +  G    SV WS+EFVK 
Sbjct: 78  GPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWSIEFVKE 137

Query: 121 NEDVATPHNYLQFALEVTKGIQANYLCNN 148
           NEDVA PH+YL  A + +K +  +YLCNN
Sbjct: 138 NEDVAAPHHYLTIAAQTSKTLD-DYLCNN 165

[Close]

BLAST of Lsi05G003210 vs. TrEMBL
Match: A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.2e-38
Identity = 83/149 (55.70%), Postives = 106/149 (71.14%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KISEQLQLK S  KFY+ F NKM+   QMFP     YK++EGNGFAH S++  KY++G
Sbjct: 4   IAKISEQLQLKSSAHKFYDFFTNKMDSLIQMFPHIFTSYKILEGNGFAHASVIHIKYNIG 63

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQV-TDGGTKGS-VKWSVEFVKA 120
            P + K++L  DD NK+I  E  EGDLLRDFE+ ++K QV  + G+ GS V WS+EFVKA
Sbjct: 64  GPAEMKERLAFDDANKSIAFEVFEGDLLRDFEVFKMKMQVNNEKGSNGSLVNWSIEFVKA 123

Query: 121 NEDVATPHNYLQFALEVTKGIQANYLCNN 148
           NEDVA PH YL  A + +K +  +YLCNN
Sbjct: 124 NEDVAAPHQYLTIAAQTSKTLD-DYLCNN 151

[Close]

BLAST of Lsi05G003210 vs. TrEMBL
Match: A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-36
Identity = 80/149 (53.69%), Postives = 109/149 (73.15%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKME-CFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDL 60
           I +ISEQ+ +K S  KFY+ FKNKM+  F QMFP+  +  KVVEGNGF+ GSI+  K++ 
Sbjct: 4   ICEISEQVNIKSSAHKFYQFFKNKMDYVFVQMFPEIYKSCKVVEGNGFSDGSIIHLKFNA 63

Query: 61  GIPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTK-GSVKWSVEFVKA 120
           G P + K++L +DD NK+I  E +EGD LR+FE+L++K QV + G   G+V WS+EFVKA
Sbjct: 64  GKPEEVKERLAIDDANKSITFECLEGDPLRNFEVLKLKFQVLENGNNGGTVNWSIEFVKA 123

Query: 121 NEDVATPHNYLQFALEVTKGIQANYLCNN 148
           NEDVA+PH+YL    +V KG+  +YLCNN
Sbjct: 124 NEDVASPHHYLLCVTKVAKGLD-DYLCNN 151

[Close]

BLAST of Lsi05G003210 vs. TrEMBL
Match: A0A0A0L7N6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.2e-36
Identity = 78/151 (51.66%), Postives = 108/151 (71.52%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KIS+Q+QLKC G+KFY+ FKNKM+   ++FP+  + YK+VEGN   HGS+   KYD G
Sbjct: 4   IAKISDQVQLKCCGKKFYDFFKNKMDHLPRVFPQYFESYKLVEGNSLTHGSVSFWKYDFG 63

Query: 61  I--PLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKG--SVKWSVEFV 120
               ++ K K+ +D+PNKTII E +EGDL +DF++  VK +V DGG  G  SV W +E+V
Sbjct: 64  FGSSIEVKMKVLVDEPNKTIIYECLEGDLFKDFDIFNVKIKVNDGGNNGNSSVNWCLEYV 123

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYLCNN 148
           KANE+V  P+NYLQF L++ K + A +L NN
Sbjct: 124 KANENVDPPNNYLQFGLKLCKNVDA-FLGNN 153

[Close]

BLAST of Lsi05G003210 vs. TrEMBL
Match: A0A0A0L771_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-33
Identity = 77/152 (50.66%), Postives = 108/152 (71.05%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQI-YKVVEGNGFAHGSIVDCKYDL 60
           I  ISE+++LK  G+KFY  F  KM+   QMFP+NI   Y+ VEGN F HG+++  KYD 
Sbjct: 4   ICSISEEVKLKACGQKFYHFFLTKMDVLNQMFPQNINCTYEFVEGNSFTHGTVIHWKYDF 63

Query: 61  GIPLK-AKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKG--SVKWSVEFV 120
           G  L+ +K +L +D+PNK+I +E +EGD+L++F++ +VK QV D    G  SVKW VEFV
Sbjct: 64  GGGLEESKVRLTVDEPNKSIAMECLEGDVLKEFQVFKVKVQVKDSDVVGVNSVKWCVEFV 123

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYLCNNN 149
           KANEDVA P+N+L+  ++V K + A YLCNN+
Sbjct: 124 KANEDVAPPNNHLKCGIKVCKDLDA-YLCNNS 154

[Close]

BLAST of Lsi05G003210 vs. TAIR10
Match: AT1G70850.1 (AT1G70850.1 MLP-like protein 34)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 53/145 (36.55%), Postives = 79/145 (54.48%), Query Frame = 1


Query: 4   ISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DLGIP 63
           +  ++++K S EKF+ +F  K     +  P NIQ   + EG+    GSIV   Y   G  
Sbjct: 169 LETEVEIKASAEKFHHMFAGKPHHVSKATPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEA 228

Query: 64  LKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKAN 123
             AK+++   DP K +I    IEGDL+++++   +  QVT   GG+   V W  E+ K N
Sbjct: 229 KVAKERIEAVDPEKNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKIN 288

Query: 124 EDVATPHNYLQFALEVTKGIQANYL 145
           E+VA P   LQFA+EV+K I  + L
Sbjct: 289 EEVAHPETLLQFAVEVSKEIDEHLL 313

[Close]

BLAST of Lsi05G003210 vs. TAIR10
Match: AT1G70830.1 (AT1G70830.1 MLP-like protein 28)

HSP 1 Score: 82.8 bits (203), Expect = 1.9e-16
Identity = 51/148 (34.46%), Postives = 80/148 (54.05%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           + K+   +++K S EKF+ +F  K     +  P NIQ   + EG+    GSIV   Y   
Sbjct: 185 VGKLETDVEIKASAEKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWGQVGSIVFWNYVHD 244

Query: 61  IPLK-AKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFV 120
              K AK+++   +PNK +I    I+GDL+++++   +  QVT   GG    V W +E+ 
Sbjct: 245 REAKVAKERIEAVEPNKNLITFRVIDGDLMKEYKSFLLTIQVTPKLGGPGSIVHWHLEYE 304

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYL 145
           K +E+VA P   LQF +EV+K I  + L
Sbjct: 305 KISEEVAHPETLLQFCVEVSKEIDEHLL 332

[Close]

BLAST of Lsi05G003210 vs. TAIR10
Match: AT5G28010.1 (AT5G28010.1 Polyketide cyclase/dehydrase and lipid transport superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.3e-15
Identity = 45/148 (30.41%), Postives = 78/148 (52.70%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DL 60
           + K+  ++++K     FY ++  +     +  P+N+Q   + +G     GSIV   Y   
Sbjct: 16  LGKLEVEVEIKAPAAIFYHIYAGRPHHVAKATPRNVQSCDLHDGEWGTVGSIVYWNYVHE 75

Query: 61  GIPLKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVT--DGGTKGSVKWSVEFV 120
           G    AK+++ + +P K +I    IEGD++ +++   +  QVT  +GGT   VKW +E+ 
Sbjct: 76  GQAKVAKERIELVEPEKKLIKFRVIEGDVMAEYKSFLITIQVTPKEGGTGSVVKWHIEYE 135

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYL 145
           K +E+V  P N L F  E+TK I  + L
Sbjct: 136 KIDENVPHPENLLPFFAEMTKEIDEHLL 163

[Close]

BLAST of Lsi05G003210 vs. TAIR10
Match: AT1G70840.1 (AT1G70840.1 MLP-like protein 31)

HSP 1 Score: 75.1 bits (183), Expect = 4.1e-14
Identity = 48/146 (32.88%), Postives = 76/146 (52.05%), Query Frame = 1


Query: 3   KISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DLGI 62
           K+   +++K S  KF+ +F  +     +  P  IQ  ++ EG+    GSIV   Y   G 
Sbjct: 23  KLETDIEIKASAGKFHHMFAGRPHHVSKATPGKIQGCELHEGDWGKVGSIVFWNYVHDGE 82

Query: 63  PLKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKA 122
              AK+++   +P K +I    IEGDLL++++   +  QVT   GG    V W VE+ K 
Sbjct: 83  AKVAKERIEAVEPEKNLITFRVIEGDLLKEYKSFVITIQVTPKRGGPGSVVHWHVEYEKI 142

Query: 123 NEDVATPHNYLQFALEVTKGIQANYL 145
           ++ VA P  +L F +EV+K I  + L
Sbjct: 143 DDKVAHPETFLDFCVEVSKEIDEHLL 168

[Close]

BLAST of Lsi05G003210 vs. TAIR10
Match: AT1G70890.1 (AT1G70890.1 MLP-like protein 43)

HSP 1 Score: 74.3 bits (181), Expect = 6.9e-14
Identity = 47/148 (31.76%), Postives = 78/148 (52.70%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKY-DL 60
           + K+  ++++K S +KF+ +F  +     +  P  I   ++ EG+    GSIV  KY   
Sbjct: 8   VGKLETEVEIKASAKKFHHMFTERPHHVSKATPDKIHGCELHEGDWGKVGSIVIWKYVHD 67

Query: 61  GIPLKAKQKLHMDDPNKTII-LEFIEGDLLRDFEMLQVKGQVTDG-GTKGSVK-WSVEFV 120
           G     K K+   DP K +I  + +EGDL+ +++      QVT   G  GS+  W +E+ 
Sbjct: 68  GKLTVGKNKIEAVDPEKNLITFKVLEGDLMNEYKSFAFTLQVTPKQGESGSIAHWHLEYE 127

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYL 145
           K +E+VA P   LQF +E++K I  + L
Sbjct: 128 KISEEVAHPETLLQFCVEISKEIDEHLL 155

[Close]

BLAST of Lsi05G003210 vs. NCBI nr
Match: gi|778680834|ref|XP_011651403.1| (PREDICTED: major latex protein 15-like [Cucumis sativus])

HSP 1 Score: 187.2 bits (474), Expect = 2.1e-44
Identity = 85/143 (59.44%), Postives = 108/143 (75.52%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I  ISE+++L C G+KFY+ F NKM+C+  +FP+N+Q YK VEGN F HGS+   KYD G
Sbjct: 4   ICNISEEVKLNCCGDKFYDFFVNKMDCYTHLFPQNLQSYKFVEGNRFTHGSVTHWKYDFG 63

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKG--SVKWSVEFVKA 120
           IP + K +L +D+PNK +I E +EGDLL+DFEM QVK +V DGG  G  SVKWSV F+KA
Sbjct: 64  IPAEVKTRLLVDEPNKAVIFECVEGDLLKDFEMFQVKVEVRDGGKNGVSSVKWSVGFMKA 123

Query: 121 NEDVATPHNYLQFALEVTKGIQA 142
           NEDVA PHNYLQF ++V KG+ A
Sbjct: 124 NEDVAPPHNYLQFGVKVCKGLDA 146

[Close]

BLAST of Lsi05G003210 vs. NCBI nr
Match: gi|659114442|ref|XP_008457056.1| (PREDICTED: kirola-like [Cucumis melo])

HSP 1 Score: 186.4 bits (472), Expect = 3.5e-44
Identity = 85/143 (59.44%), Postives = 108/143 (75.52%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I  ISE+++L C G+KFY+ F NKM+ +  +FP+N+Q YK VEGNGF HGS+   KYD G
Sbjct: 4   ICNISEEVKLNCCGDKFYDFFLNKMDSYIHLFPQNLQSYKFVEGNGFTHGSVTHWKYDFG 63

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKG--SVKWSVEFVKA 120
           IP + K +L +D+PNK +I E +EGDLL+DFEM QVK +V DGG  G  SVKWSV F+KA
Sbjct: 64  IPAEVKTRLLVDEPNKAVIFECVEGDLLKDFEMFQVKVEVRDGGKNGVSSVKWSVGFMKA 123

Query: 121 NEDVATPHNYLQFALEVTKGIQA 142
           NEDVA PHNYLQF ++V KG+ A
Sbjct: 124 NEDVAPPHNYLQFGVKVCKGLDA 146

[Close]

BLAST of Lsi05G003210 vs. NCBI nr
Match: gi|778680829|ref|XP_004151203.2| (PREDICTED: major latex protein 149-like [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KISEQ+QLKCSG KFY+ F NKM+   QMFP  +  YK++EGNGFAHGS++  KY++G
Sbjct: 4   IAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIG 63

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKA 120
            P + K++L  DD NK+I  E  EGDL RDFE+ ++K QV +  G    SV WS+EFVK 
Sbjct: 64  GPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWSIEFVKE 123

Query: 121 NEDVATPHNYLQFALEVTKGIQANYLCNN 148
           NEDVA PH+YL  A + +K +  +YLCNN
Sbjct: 124 NEDVAAPHHYLTIAAQTSKTLD-DYLCNN 151

[Close]

BLAST of Lsi05G003210 vs. NCBI nr
Match: gi|700202691|gb|KGN57824.1| (hypothetical protein Csa_3G331340 [Cucumis sativus])

HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40
Identity = 82/149 (55.03%), Postives = 107/149 (71.81%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KISEQ+QLKCSG KFY+ F NKM+   QMFP  +  YK++EGNGFAHGS++  KY++G
Sbjct: 18  IAKISEQVQLKCSGHKFYDFFTNKMDSVIQMFPHIVTSYKILEGNGFAHGSVIHLKYNIG 77

Query: 61  IPLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTD--GGTKGSVKWSVEFVKA 120
            P + K++L  DD NK+I  E  EGDL RDFE+ ++K QV +  G    SV WS+EFVK 
Sbjct: 78  GPAEIKERLAFDDANKSIAFEVFEGDLFRDFEVFKMKMQVINEKGSNGSSVNWSIEFVKE 137

Query: 121 NEDVATPHNYLQFALEVTKGIQANYLCNN 148
           NEDVA PH+YL  A + +K +  +YLCNN
Sbjct: 138 NEDVAAPHHYLTIAAQTSKTLD-DYLCNN 165

[Close]

BLAST of Lsi05G003210 vs. NCBI nr
Match: gi|659131188|ref|XP_008465556.1| (PREDICTED: MLP-like protein 28 [Cucumis melo])

HSP 1 Score: 172.2 bits (435), Expect = 6.9e-40
Identity = 86/151 (56.95%), Postives = 114/151 (75.50%), Query Frame = 1


Query: 1   ISKISEQLQLKCSGEKFYELFKNKMECFCQMFPKNIQIYKVVEGNGFAHGSIVDCKYDLG 60
           I+KI+E++QLK SGEKF+E FKNK + F +MFP NI+ YK VEGN F+HGS+   KYDLG
Sbjct: 4   IAKIAEKVQLKSSGEKFFEFFKNKADYFPRMFPGNIKSYKFVEGNSFSHGSVSIWKYDLG 63

Query: 61  I--PLKAKQKLHMDDPNKTIILEFIEGDLLRDFEMLQVKGQVTDGGTKG--SVKWSVEFV 120
               ++ K KL +D+ NKTII E +EGDL +DF+M +VK +VTDGG+ G  SV W +EFV
Sbjct: 64  FGRAVEVKVKLLLDEANKTIIYECLEGDLFKDFDMFKVKIEVTDGGSSGNSSVNWCLEFV 123

Query: 121 KANEDVATPHNYLQFALEVTKGIQANYLCNN 148
           K+NE+VA P++YLQF  ++ K + A YLCNN
Sbjct: 124 KSNENVAPPNDYLQFGAKICKDVDA-YLCNN 153

The following BLAST results are available for this feature:

BLAST of Lsi05G003210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MLP34_ARATH	3.1e-16	36.55	MLP-like protein 34 OS=Arabidopsis thaliana GN=MLP34 PE=2 SV=1	[more]
KIRO_ACTDE	1.2e-15	29.86	Kirola OS=Actinidia deliciosa PE=1 SV=1	[more]
MLP28_ARATH	3.5e-15	34.46	MLP-like protein 28 OS=Arabidopsis thaliana GN=MLP28 PE=1 SV=1	[more]
MLP31_ARATH	7.2e-13	32.88	MLP-like protein 31 OS=Arabidopsis thaliana GN=MLP31 PE=2 SV=2	[more]
MLP43_ARATH	1.2e-12	31.76	MLP-like protein 43 OS=Arabidopsis thaliana GN=MLP43 PE=1 SV=1	[more]

BLAST of Lsi05G003210 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LA22_CUCSA	2.2e-40	55.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331340 PE=4 SV=1	[more]
A0A0A0L9D7_CUCSA	1.2e-38	55.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G219190 PE=4 SV=1	[more]
A0A0A0LCM8_CUCSA	4.2e-36	53.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G333840 PE=4 SV=1	[more]
A0A0A0L7N6_CUCSA	4.2e-36	51.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G331330 PE=4 SV=1	[more]
A0A0A0L771_CUCSA	1.2e-33	50.66	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G337350 PE=4 SV=1	[more]

BLAST of Lsi05G003210 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70850.1	1.8e-17	36.55	MLP-like protein 34	[more]
AT1G70830.1	1.9e-16	34.46	MLP-like protein 28	[more]
AT5G28010.1	6.3e-15	30.41	Polyketide cyclase/dehydrase and lipid transport superfamily protein	[more]
AT1G70840.1	4.1e-14	32.88	MLP-like protein 31	[more]
AT1G70890.1	6.9e-14	31.76	MLP-like protein 43	[more]

BLAST of Lsi05G003210 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680834\|ref\|XP_011651403.1\|	2.1e-44	59.44	PREDICTED: major latex protein 15-like [Cucumis sativus]	[more]
gi\|659114442\|ref\|XP_008457056.1\|	3.5e-44	59.44	PREDICTED: kirola-like [Cucumis melo]	[more]
gi\|778680829\|ref\|XP_004151203.2\|	3.1e-40	55.03	PREDICTED: major latex protein 149-like [Cucumis sativus]	[more]
gi\|700202691\|gb\|KGN57824.1\|	3.1e-40	55.03	hypothetical protein Csa_3G331340 [Cucumis sativus]	[more]
gi\|659131188\|ref\|XP_008465556.1\|	6.9e-40	56.95	PREDICTED: MLP-like protein 28 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009607	response to biotic stimulus
GO:0006952	defense response

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR000916	Bet_v_I/MLP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G003210.1	Lsi05G003210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000916	Bet v I/Major latex protein	PFAM	PF00407	Bet_v_1	coord: 3..142 score: 1.3
IPR000916	Bet v I/Major latex protein	SMART	SM01037	Bet_v_1_2	coord: 3..146 score: 5.3
IPR023393	START-like domain	GENE3D	G3DSA:3.30.530.20		coord: 2..145 score: 1.1
None	No IPR available	PANTHER	PTHR31907	FAMILY NOT NAMED	coord: 1..148 score: 2.6
None	No IPR available	unknown	SSF55961	Bet v1-like	coord: 2..32 score: 4.64E-21coord: 65..142 score: 4.64

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G003210	CmaCh14G008400	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G003210	Cla013183	Watermelon (97103) v1	lsiwmB361
Lsi05G003210	MELO3C020271	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G003210	CsGy3G020890	Cucumber (Gy14) v2	cgyblsiB199

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G003210	Silver-seed gourd	carlsiB464
Lsi05G003210	Silver-seed gourd	carlsiB700
Lsi05G003210	Cucumber (Chinese Long) v3	cuclsiB231
Lsi05G003210	Watermelon (97103) v2	lsiwmbB329
Lsi05G003210	Wax gourd	lsiwgoB447
Lsi05G003210	Cucumber (Gy14) v1	cgylsiB607
Lsi05G003210	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G003210	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G003210	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G003210	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G003210	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G003210	Wild cucumber (PI 183967)	cpilsiB210
Lsi05G003210	Cucumber (Chinese Long) v2	culsiB212
Lsi05G003210	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G003210	Cucumber (Gy14) v2	cgyblsiB192
Lsi05G003210	Melon (DHL92) v3.6.1	lsimedB384