Lsi05G003170 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G003170
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionMajor latex-like protein
Locationchr05 : 4047651 .. 4054838 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTTGTCCGTCATTAATTGTTCGATATAAAAGGTGATCACCCCACTTTAAAAAAACGCGTTTTTTATGTCAAATGTTTCAAAATGTTTAATCCGTTTTTAATCTTGGTCTGAGAATTAAAAAGTGTCATTAAATGTCCCATTTTTATGTCAGGAAATGTCCGTCATAGCATTTTATAACAATATAAAAAAATGCATGCTTCCGTAGTAAACTAGCAATATTTCTCTTCCACCTATAAATGCACAAACACAACCTATAATAATATAATACACTAACATAAAAGTAAAAACAAAGTTTGTAATTAATGAGACAACTTATACGTGATTTTAGTACATAACTCCATCAACATGTTAATACAAACTCAAGGTATTATTAAGATTAAAATCGTTGCTATAATTATATTTTAAATTCAATGACTATTTTAAATTAAATATATATATATTTTGATAGACATTTTAATGTTAGGGCCAAAATGAAATTTAAATCAACAATAAGACAATTATCAGAAAGTGGATTGAGAGCCAAAGCCACCAAGAAACAAACAACATTATTTTACACATGCATCTTGCTTATCTGAAACAGATAACAACTCTAATAACTTGATTTAAAATACTGTTGAGTGGAGGAAAAATAAATTAATTAATTAAAGTGTGTAGAGTGTATTAAAAAAACGATAAAAAGTTTGGCGAAATTATTGAGTGGTTGTTCAAATCATACCTAAAACAGTAACCAAAATTTACTATGAAATCCCTCCTTAACTTAAAAGTTTTTATTACATAAAAAGAAATGAGCTAATGTGGAAGTGATTCTAAAATAGTTAAAATTACTTTTGTCATTTTTAAAAGTACAGCATTACAAAGTGAAGTTTTAAGATGATTCGTCGCACAGATCACTGACATCACACAAGATGTCTTGACTAATTTAGAGACAACAAACGAATAACAAACAGTAAATTAAAAATGAACACACAGAGTTTGGTAACCCAGTTCGGCGATATACCACCTACGTCTGGAGGCAGTGGGAGCCCGTGGAAAGATACTTTTACTAACAGAAAATCAAGCAATTACAACGTTGTATTTTTTGTAAATCTATGGCAAATACAGTAACATACGAAACGCTCGACTCAATGAATGTTCACTTAGGCTCCTCTTAAGTGTGAGACTCTCTCTCAATGAAATTTAGGCTTCCACTAAGTATGAGAATATTAGTAAAGAAACACTTAGACTCCCTATAAGTGTGAGACTCTTTCTCAAATGTAATCTTTCCACCTTCTTGTAAATGCACCTTCACTTGAAGAATTTAGGCTCCCTCTAAATTTAAGAACTCCTTCACAAGTAATGATGTCTTAAGCTCCCTTTAAGACCGAGACAATCTTCTTTTAGCAAAAGCTTCAACGATGAATTACAACAACAACTTCAAGATCAATGATAATTCAAAATCGAAGTTGTAACATTCAGTCACCAAAATCAAAAGGTCACACAACAATGTAAAAACAACAACCTTAAGAAGAACACAACTTGCTCTTAAATATGCACAACAAAAATTAGGAAAATAGCCTCATTCAAAATTTACAAAGCTTAAACAAGGAAAGAATCCAGAAAAAATAATTCTACAGAATTTTCCAGACAAGAAAAAAATAAAGTGCAGGATTGACATGTTCTGTGACAACTTTTGCGACATCACCAAAACAGCCCAAGAATCAAACTCAAGCAACCTTAAAAAAATATATAGCCAATTCCAAATCTTTAACAAACTCCCCCATTGGCTATTATTTTTAAAGTCAGAACAACCAAAGTTTTTACCCAACAAACAATAAAGAGACAACCAGTGAAACAACCCAAATGAAAAAAGTCAAACAATCTTAAACAAATATAGCCAACACCAAATCTCTAACACAAAGCTTTAGAGTGTGTTTAAGCTACAAAAATGTGTGAAAGAGTGAGGGAATTGCTTGGAGGTTGTTCGTTGATTTAAGGGTGATAATTAAGGAGTTTTCAATGTCTTCCATCAACAGGATTCATGACGGAAGTAGTGTTTCCCTATTTCCTTTACTTTTCATTCTTTGTATGTTTGTTAGAATGTATGAGAACATGTTTCTAACAAGTATGGGTGGTTCAACATTGTAGTTTCTAAGGTGTTGATGAACTTCTCTATGTATTTAAGTTAATGTTTAATATTTTCTATGAATGTTGTGGATTTGATTGTTTTCCATTACTATTGTGCTCCTTACATAGATTGATCATTGATGCATGCGAAATTAAATATTCAGTTAGAAAGATTGTATGTTTAATTGGATCATTATCTAATCTATCATGAAAAAATTAAGTTGATAATGAAAGTTGATCATGACTATGCTTAATGCCATGCTTCTTAATTCAGCTTCAAGAAATTAGTAATCATTTATGTTTTCATGAGAAAATGTTATTGCCGAAAGATAATAATCCGAAAAATAGTTTCTAAACTTAAACATATCATTGACACAATATTTCATAGAACCTTTGTATGACTTAATGAACTAATTAAGAAAATCAACACCCTTAAACGCCTTTGTCTCTTGAATTTTAACTTTTATTTCACCTTTGTTTGTTTGTTTTTTTTTTTTACTTTAAAAATCACATCATCTAGATTTCAATCCCTAAATAAAAAAAACATGATTCTAGAATAGATAAATTTAATCTGGGTATTTGATCTCGAGAGAACAATAATCGATCTCTCAAGACGTTTTACTATATTACATTTGATACATGGCGCTTGTGTACCACATCAATATGTTCAACTAATACTTGACCTTGAAATCCAATAAAGAAAAGGCCAATTATTTCAAATGGTAAAATCAGCCTAATTATAAAATTTCTTAAAGTTATTACAAATGTAGCAAATTAAATTTGATTTTGTTTCTATTCCAGTTTTGCCATTTCAGAGAACATGCGAAAGGAAGGTGGGAGCGCTCTATAATTTAAATCTAGAGTTGATTAATTAAAACCAAAATTTTCCTTTTTCCTACTTAAACTACATATCTTTCAAAAATTTCAAATCTTTTATTAAATAATTAGATAAAAAAATTTACTTAATTATCTTCTCAAATTAATTCAATTTTAGCTCTAAAAATTTAAAATTAAAGAAAATAAAACCGATAATTTAAGATAATTAACTTAAATTTACTTGAAACTTCCTACCTTACTTGAACGAGACACGTTCCATAGATTTGCTGACATTTGAGATATGCTAAGAGTGTTTATTTTTCTTCTCTTTCAAAAACTATTTCCATATTATCAAAATCCTAATATAATTGCTATATTTGTATATATAGAAATGTGAAATTTCCAAACCATTAATAAAAATTTCCAAAAATATTTATAAAATTGCTATTTAAGAGATGTATAGCTTCTGCTTGTTTCATCTCCTTTTAGTTTATATATACATGCTTTGTTTCAAGAAGCAAAAGTGATCATTTTGGGTGTTGGTCCATGAGACATGCGTAAAATTTCTTTAGCTATTAATCGTAGTTTCAATTTTAGGTGAAACATCATTTAAAGTGAATGTTTAGGTGAGAAATAACATTGCATATAAAATTATGAAAACTTTTGAAGGATAGAAACAATTGAATTATACATACATTGTCCCGTGAGATTAGTCGAGGTGCGCGTAAGCTGGTCCGGACACTCACGGATATCAAAAAAAAAAAATATTGAATTATTGTGAATAACTTTGTATCAAAACTTATTTGTATTAGATAATCCAAACTTTTGATAGTGGCTTTTGTATTATATAACTTAATTATATTTAAACTATAAATAAGAGATAAAATAATAAAGGGAAAAAACAAGAAATTGTTAAATAATTGGGATTTAAAATACAATCGGTGGGGAAAAAAGTGTGCAAGCATCCATGAACACCCACAAGAGTAATAAAAATTATAGTTAAAATTTAGCAAAATATTGTTGATCAAGTGGTGCTTTAAATCATACATAAAATATCCACTCAAAATTGAGTATAAAATCCCCTCTTAGCTTGTAGTTTTATCACATCAAAAGAAAATGAGCCAAAGTGATAGCATTGTGGGAAGGGTTGAGCTAAAATCTCCCATCGAGAAGTTCTATGGCTTCTACAGGAACCATTTTGGGAGATTTGATCAATCTATTTCCTGAGTTGTTCCAGAGCATTCACCTTGTAGAAGGAGAACATTTTTCTGCTGGCTGTGTTATGCTATTTATATACCATCTTGGTGAGAGATTTACTTCTTCTCTTTTATTCTTCTCCTAACTAATACATTCAAATTCCACATTATGTTCCATTTCATTTACGTATTTTGTTTTTCTTTAGATTCTTATAGTAAATGGTTATTATAGTTCATCATTAATAATTTATAGTTATAATATAGTCTGTGTTTGGGGTGTAAACTATTTTAGTTTGGATAGGAAATAGTAAACACTATAACATAATGAGAGAAAGAGAATATGAGTAGGAAATAATAAACACTATATAACAAAGAGGGATTTGAAATAGTAATACCGTAGATAAAATAGTAGGTTATAAATAGTTGTAAACACAACTAGTATATTTGGAGCCCCAACACATGGAGTGGGCTATTCCACCAACTTCAAGTTTGGGGAACACTCCTTAAGAAATAACTATTTTAGTCTATGTACTTTATTGACATATTATAAAGGGCTAAGGGAGAATTAATTCAATCCATGGTGACAATCTACCTGAGATTTAATATCCTACGAGTTTTATTGACACTCATTAGTCTAGGTGCAAGTAAGTTGGCAAGGACACTCACAAATATATATACTTTTGTATATATATATAATTATAAACATTTTTAAATAATTGTAAATATAATAATCTATGAGTGATAGACTTTATTGGGTTGATAGACTCATATCATTGATAAACTCCATTCTTAATACCGTTGATAGACTACGAAAGTTTAATCTAAATTTTCTTATACCTACAAATTCTGCATTTTGCTATCTCGACTAATATTTTGGTATTATTATTATTATTATTATTATTATTATGTATTTAAGGTAAATTAATGGCAGTTAAATTATAAGTACAATCATTTGTAGTAGGTTCCTAAAACTTTAAATTCTGTGTCTAATATTGGACTCAAAACTTTCGATTATAAGTCCAATGGATTCTTAACAAAACATATATATATATATATATATTAAATTAGTCCATCCATTAGTTATGATTCATGGCGTTAAAACTTTTAATTTTGTGCCTAATAAGGTTTAATTTGAAATTGTTTAACTTTTAAAATAATTGTTGGCAATTGTGCTTTTAGAAAAATCAACTATATTATGAAGCAAATTAGTGTTTGATAAATTTAAGCTTTAAATCTGAACAAATTTGGTTACAATTTTTGGTATATAAATACTATATTATTGTGTTTTACATATAATATAACTAAATAAACTTACTATCCAAATAATTTTTTTTAATAATTTATAATATCTAAATAAACCCACTTTCAAAATATTTAAATAATTATTTAAAATGTTATACTTTCTTAATTTTTTAAGTATATAAGGAAAAACTTTAATTTTCTTTTTAAAAAATCAATATGATATGATTTAAAAAAAAGGAAATGTATTATATGAAAAATGATAGTTATGTGAGGAAGATACTAGATATATAATCTAAATCTTAATTTTGAATGATAAAATTAAAAATTAAAAATTAAAAATTTATTAAAAAAAAAATCTAAAAGCTAATAGAGAAATGTTCTAAAAATGATGTGAAATGAATGTGGGTTGTAAAAATGATTTTAGTAGATTTAATAAAAAAAAATCATCTTATCAAATTCAAAGTACTCTTAACACACCACCCTAGATCCATAAATTCTAAAAAAATTGAAGAAATAGCTAAATTAATTTGTAATTTTGAAAGTTTGGTTCAAGGATCAAATAGACATAAACTTACGTTTCACCAAAAGAAGTTGTTGAACCTTGATTGCTTTATTCTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATAATTTTGAAAGTTATTTAACATTGATTGGTTTAGAATTAGAGTACAAATTCAACAACTTATGACAATTACTTCAAATGGAGATATATAATAAAGGGAGGGTTATTTTATTTATTTATTATTTTTTTTTTGAATTTAATGATAAAAAACAGGACATTAAGTTGTATCAGAAAAATGGTCAATGAAAGTTGTGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGATTGAAGCTGTTAACTATGGAGGGTTAAGCAAAGTAGGAGGAAGCTTTGCAAAATGGACTTTTGAGTATGAAAAGGCTTATGAAAATGTTCCTGAACTAGCAAACTACATGGAATTGTTTCTCAAAGTTGCCAAAGGTGTTGATGCTTATCTTTCTAAACAACACTAAAACCCTAAAAACACAATATTTAATAAGTGTGTATGAGACCTAAACTCTCTCTGTGAAATACTTTTGGTTTGTTCTCAAATAAGAAATTGTGTGTGTAATAATGTGATATATATTAAGAAGGAATTTGGTCAAATGTGTATCTTATACATAATATGTAATATTTTCTAGATGAAAATCTATCTACCTATGTTGTTATAA

mRNA sequence

ATGAGGACATTAAGTTGTATCAGAAAAATGGTCAATGAAAGTTGTGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGATTGAAGCTGTTAACTATGGAGGGTTAAGCAAAGTAGGAGGAAGCTTTGCAAAATGGACTTTTGAGTATGAAAAGGCTTATGAAAATGTTCCTGAACTAGCAAACTACATGGAATTGTTTCTCAAAGTTGCCAAAGGTGTTGATGCTTATCTTTCTAAACAACACTAAAACCCTAAAAACACAATATTTAATAAGTGTGTATGAGACCTAAACTCTCTCTGTGAAATACTTTTGGTTTGTTCTCAAATAAGAAATTGTGTGTGTAATAATGTGATATATATTAAGAAGGAATTTGGTCAAATGTGTATCTTATACATAATATGTAATATTTTCTAGATGAAAATCTATCTACCTATGTTGTTATAA

Coding sequence (CDS)

ATGAGGACATTAAGTTGTATCAGAAAAATGGTCAATGAAAGTTGTGGAGATATGCAAAAATATTACAAAGTGCTGAGAGCAAAGATTGAAGCTGTTAACTATGGAGGGTTAAGCAAAGTAGGAGGAAGCTTTGCAAAATGGACTTTTGAGTATGAAAAGGCTTATGAAAATGTTCCTGAACTAGCAAACTACATGGAATTGTTTCTCAAAGTTGCCAAAGGTGTTGATGCTTATCTTTCTAAACAACACTAA

Protein sequence

MRTLSCIRKMVNESCGDMQKYYKVLRAKIEAVNYGGLSKVGGSFAKWTFEYEKAYENVPELANYMELFLKVAKGVDAYLSKQH
Homology
[Close]
BLAST of Lsi05G003170 vs. TrEMBL
Match: A0A0A0LA34_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 9.4e-17
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVGGSFAKWTFEYEKAYENVPELANYMELFLKVAKGV 75
           GD+ K+YKV RAK+EAVN GGL+KVGG+FAKWT EY+KA ENVP    YMEL +KV+KG+
Sbjct: 89  GDVLKHYKVFRAKLEAVN-GGLNKVGGNFAKWTIEYQKANENVPSPETYMELAVKVSKGL 148

Query: 76  DAYLSK 82
           DAY+ K
Sbjct: 149 DAYIFK 153

[Close]
BLAST of Lsi05G003170 vs. TrEMBL
Match: A0A0A0LAY7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-15
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD+QKYYKVLRAK+E V +G  SK+G GSFAKWT E+EKA ENVP   ++ME+F+K++KG
Sbjct: 91  GDLQKYYKVLRAKLEVV-HGRSSKIGRGSFAKWTIEFEKANENVPSPDSHMEIFVKISKG 150

Query: 76  VDAY-LSKQ 83
           VDAY LSKQ
Sbjct: 151 VDAYCLSKQ 158

[Close]
BLAST of Lsi05G003170 vs. TrEMBL
Match: N0DKL1_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.8e-13
Identity = 43/67 (64.18%), Postives = 51/67 (76.12%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD  K +KVLRAK E VN GGLSKV  G+F KWT E+EKA +NV    NY+ELF+K++KG
Sbjct: 90  GDPLKEFKVLRAKFEVVN-GGLSKVRRGNFTKWTVEFEKANQNVASPQNYLELFVKISKG 149

Query: 76  VDAYLSK 82
           VDAY SK
Sbjct: 150 VDAYFSK 155

[Close]
BLAST of Lsi05G003170 vs. TrEMBL
Match: A0A0A0LCN2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-12
Identity = 40/67 (59.70%), Postives = 50/67 (74.63%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVGG-SFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD+ K YKV   ++E VN G LSKVGG SFAKWT ++ KA ENVP   NY+E+F+ ++KG
Sbjct: 91  GDVLKNYKVFTTRLEVVN-GSLSKVGGGSFAKWTIDFVKANENVPSPENYLEMFINMSKG 150

Query: 76  VDAYLSK 82
           VDAY SK
Sbjct: 151 VDAYFSK 156

[Close]
BLAST of Lsi05G003170 vs. TrEMBL
Match: N0DK19_CUCPE (Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.1e-12
Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD  K +KVLRAK E VN GGLSKV  G+F KWT E+EKA +NV    NY+ELF+K++KG
Sbjct: 90  GDPLKEFKVLRAKFEVVN-GGLSKVRRGNFTKWTVEFEKANQNVASPQNYLELFVKISKG 149

Query: 76  VDAYLS 81
           VDAY S
Sbjct: 150 VDAYFS 154

[Close]
BLAST of Lsi05G003170 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo])

HSP 1 Score: 98.2 bits (243), Expect = 7.1e-18
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVGGSFAKWTFEYEKAYENVPELANYMELFLKVAKGV 75
           GD+ KYYKV RAK+EAVN GGL+KVGG+FAKWT EY+KA ENVP   NYMEL +KV+KG+
Sbjct: 89  GDVLKYYKVFRAKLEAVN-GGLNKVGGNFAKWTIEYQKANENVPSPENYMELAVKVSKGL 148

Query: 76  DAYLSK 82
           DAY+ K
Sbjct: 149 DAYIFK 153

[Close]
BLAST of Lsi05G003170 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus])

HSP 1 Score: 94.0 bits (232), Expect = 1.3e-16
Identity = 45/66 (68.18%), Postives = 55/66 (83.33%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVGGSFAKWTFEYEKAYENVPELANYMELFLKVAKGV 75
           GD+ K+YKV RAK+EAVN GGL+KVGG+FAKWT EY+KA ENVP    YMEL +KV+KG+
Sbjct: 89  GDVLKHYKVFRAKLEAVN-GGLNKVGGNFAKWTIEYQKANENVPSPETYMELAVKVSKGL 148

Query: 76  DAYLSK 82
           DAY+ K
Sbjct: 149 DAYIFK 153

[Close]
BLAST of Lsi05G003170 vs. NCBI nr
Match: gi|778688605|ref|XP_004149788.2| (PREDICTED: kirola-like [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-15
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD+QKYYKVLRAK+E V +G  SK+G GSFAKWT E+EKA ENVP   ++ME+F+K++KG
Sbjct: 91  GDLQKYYKVLRAKLEVV-HGRSSKIGRGSFAKWTIEFEKANENVPSPDSHMEIFVKISKG 150

Query: 76  VDAY-LSKQ 83
           VDAY LSKQ
Sbjct: 151 VDAYCLSKQ 158

[Close]
BLAST of Lsi05G003170 vs. NCBI nr
Match: gi|700202699|gb|KGN57832.1| (hypothetical protein Csa_3G342350 [Cucumis sativus])

HSP 1 Score: 90.1 bits (222), Expect = 1.9e-15
Identity = 47/69 (68.12%), Postives = 58/69 (84.06%), Query Frame = 1 

Query: 16  GDMQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKG 75
           GD+QKYYKVLRAK+E V +G  SK+G GSFAKWT E+EKA ENVP   ++ME+F+K++KG
Sbjct: 91  GDLQKYYKVLRAKLEVV-HGRSSKIGRGSFAKWTIEFEKANENVPSPDSHMEIFVKISKG 150

Query: 76  VDAY-LSKQ 83
           VDAY LSKQ
Sbjct: 151 VDAYCLSKQ 158

[Close]
BLAST of Lsi05G003170 vs. NCBI nr
Match: gi|659114453|ref|XP_008457060.1| (PREDICTED: uncharacterized protein LOC103496829 [Cucumis melo])

HSP 1 Score: 87.8 bits (216), Expect = 9.6e-15
Identity = 44/66 (66.67%), Postives = 54/66 (81.82%), Query Frame = 1 

Query: 18 MQKYYKVLRAKIEAVNYGGLSKVG-GSFAKWTFEYEKAYENVPELANYMELFLKVAKGVD 77
          MQKYYKVLR K+E VN    SK+G GSFAKWT E+EKA ENVP   ++ME+F+K++KG+D
Sbjct: 1  MQKYYKVLRTKLEVVNRRS-SKIGKGSFAKWTVEFEKANENVPSPDSHMEIFVKISKGID 60

Query: 78 AYLSKQ 83
          AYLSKQ
Sbjct: 61 AYLSKQ 65

The following BLAST results are available for this feature:
BLAST of Lsi05G003170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi05G003170 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA34_CUCSA9.4e-1768.18Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342860 PE=4 SV=1[more]
A0A0A0LAY7_CUCSA1.4e-1568.12Uncharacterized protein OS=Cucumis sativus GN=Csa_3G342350 PE=4 SV=1[more]
N0DKL1_CUCPE2.8e-1364.18Major latex-like protein OS=Cucurbita pepo subsp. ovifera GN=MLP-PG1 PE=2 SV=1[more]
A0A0A0LCN2_CUCSA1.1e-1259.70Uncharacterized protein OS=Cucumis sativus GN=Csa_3G340350 PE=4 SV=1[more]
N0DK19_CUCPE1.1e-1263.64Major latex-like protein OS=Cucurbita pepo subsp. pepo GN=MLP-GR1 PE=2 SV=1[more]
BLAST of Lsi05G003170 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Lsi05G003170 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659114461|ref|XP_008457062.1|7.1e-1871.21PREDICTED: MLP-like protein 423 [Cucumis melo][more]
gi|449464144|ref|XP_004149789.1|1.3e-1668.18PREDICTED: MLP-like protein 34 [Cucumis sativus][more]
gi|778688605|ref|XP_004149788.2|1.9e-1568.12PREDICTED: kirola-like [Cucumis sativus][more]
gi|700202699|gb|KGN57832.1|1.9e-1568.12hypothetical protein Csa_3G342350 [Cucumis sativus][more]
gi|659114453|ref|XP_008457060.1|9.6e-1566.67PREDICTED: uncharacterized protein LOC103496829 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009607response to biotic stimulus
GO:0006952defense response
Vocabulary: INTERPRO
TermDefinition
IPR023393START-like_dom_sf
IPR000916Bet_v_I/MLP
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G003170.1Lsi05G003170.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 16..81
score: 1.
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 16..82
score: 2.2
NoneNo IPR availablePANTHERPTHR31907FAMILY NOT NAMEDcoord: 16..83
score: 1.2
NoneNo IPR availablePANTHERPTHR31907:SF2SUBFAMILY NOT NAMEDcoord: 16..83
score: 1.2
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 16..81
score: 4.95

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G003170Silver-seed gourdcarlsiB464
Lsi05G003170Silver-seed gourdcarlsiB700
Lsi05G003170Cucumber (Chinese Long) v3cuclsiB231
Lsi05G003170Watermelon (97103) v2lsiwmbB329
Lsi05G003170Wax gourdlsiwgoB447
Lsi05G003170Cucumber (Gy14) v1cgylsiB322
Lsi05G003170Cucumber (Gy14) v1cgylsiB607
Lsi05G003170Cucurbita maxima (Rimu)cmalsiB249
Lsi05G003170Cucurbita maxima (Rimu)cmalsiB440
Lsi05G003170Cucurbita moschata (Rifu)cmolsiB237
Lsi05G003170Cucurbita moschata (Rifu)cmolsiB430
Lsi05G003170Cucurbita pepo (Zucchini)cpelsiB470
Lsi05G003170Cucurbita pepo (Zucchini)cpelsiB511
Lsi05G003170Wild cucumber (PI 183967)cpilsiB210
Lsi05G003170Cucumber (Chinese Long) v2culsiB212
Lsi05G003170Melon (DHL92) v3.5.1lsimeB368
Lsi05G003170Watermelon (Charleston Gray)lsiwcgB332
Lsi05G003170Watermelon (97103) v1lsiwmB361
Lsi05G003170Cucumber (Gy14) v2cgyblsiB192
Lsi05G003170Cucumber (Gy14) v2cgyblsiB199
Lsi05G003170Melon (DHL92) v3.6.1lsimedB384