Lsi05G003090 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTCCTTCCAAGTTCCAACTAGTGAAACTAACAAAACTTTCCTCAAAAAAAGGGAAGAAAAAAGGGACTAATCAAAAGGAGAAATTCAACTTTCAAGTCGAGAAAAAAAAATAAAAAAATAGAAAAGAGAGAGGCAAACCGTGATATCGTTCTAATCAGAAGCGTTCTTCTTTTCTCAGAATCTGAGAATCAATGGCGACAAAGATCGACGGAATCGAAGAGGAAGGAATTTCAAAGCTCGAAGAAGGCACTCTCGTTTCCGCCGTCACCCGTCTCTGTCCCTCGACTTCGGTCGTAATCATCCAAAAGGTACCACTCCTCAACTGCATGCCTCTCTGTTCTTTTTCTCTTCTGCGCATCAATCAATCGATTGTATGATAAATACGTCTTTGTTTCTACGGAAAAAACTGCGGCACATTAATCAATCGACTGTATAATACTTGTTTGTTTCTCTGGAAAAGTCTGGCTTATGAATCAATCGACTGTATGAAACTTGTTTGTTTCTCTGGAAAATCTGGCTTATGTATCAATCGACTGTATAGAATTTGTTTGTTTCTGTGGAAATTTTGATGCATGAATCTGATCGATCGAGTGTATAAAAACATGTTTCGTTCTCGGGAAAAATTTGTGGCAGGTTATCGCGGAGGTGATCGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGCGGTGAACAAAATATACGGATCAGTGACGTTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTGATGGTAATGGTGTATTCGGTGGGACACATCTCTGGAGCGCACTTCAATCCTGCTGTTACTCTCACCTTCGCACTTTTTCGTCGCTTCCCCTTCTGCCAGGTTTTTTTTTTTTTTTTTCTTTTTCTTATGAATATTTCCATATTGCAAACGAGGAGAGTGAGAACTCAAACCTCTGTGGATCCGGTACACACGATTATTTATGTTAGTGTTTGGACAAGGAGTGGAGTTGTGAACTCCAAAGAATTATGAAATATTAAGAGTTGTGAACTGATCTAATGTGTAGGAAGTTAATAAAACATTGATGATTTTTAGTTGTGGACCCCCTAAGTAAGAGAATCCATTTCCAAGTTACGGTAGCGATTCACTAAGATCTAGAGAACCACTCAATATCGATAGTACTAAAAGGTTCATAATCACAAGGATTGACACAAGAAAAATCTTCTTTCCGAACACAAACAACACCAACGGCTCAAAGATATATCTCTAAAGTCTTGGCCCTAAATCACATCAAACAGCCCATAAATATGCACGACATAAAAGAATAGACAATCCAAAGTCAACAAGTCGAGCTCAAAGAAGGAAAGAATGATTTAGGAATAATCACTCAGAATTTTCCAGAAAAAGAAAAAAAATAAATAGACAGAATCACAGAAACAACATTTCACAAGACGTCTTAAAAAGAACAGAATAGCAGGCATCTCGTGGAACAAGGAGAAGCACAAGGTTACCAACAACTACAACACACCTAAAAAATGTAGCCAACACCAATTCTCTAATAGTTGTCCCTAACATATCCAACATTCAATTCAAAAAAAAAAGTTTGGATCCAATCGAAGAATGGTGAATCCAAAGAGACACCAATTTGAAGGGACACACATGAGAATCCCACACTGTAAAAGTTAAGAGATATTACAATGCTTGTCAGATAAATGGACTATTTCTCCTATTGTCAATTAGTTTTAAGATAAAATTTTATGTTTATCTAATATTTTAATAGACTCACGACAACAAATAGTTGTGAGTTAAACAGTTATATATGTTTTGTTTTGTTTGATAATATATGTTTGGGAATGATAATGTCATCGATATATTATGGAATGATTTGTAGGTACCAATATACATAGGAGCTCAAGTAATGGGGTCCCTTCTGGCAAGCTGCACATTGGATCTAATGCTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATCTCCAATCTTTGGTTCTTGAAATTATCATAACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTAAGTTATCCTAAAACCTTAAAACACTAATTCTTTACTTTTGAATTATTGGCCATCCTCTAAAAATAGTGAGGAATCTTTTAAGAGTTTTTTTTTTTCCTTTTAATCTTTTTGAAAATTTGGTTTGAATTTTGAGAATGTGCTCTAATTTCTAAGAGGTAGAGGAATAGGTTGGGAAAAAATGAACAAAAAAAAGTCAAGTGAGTGAATTATTATCTTTTTTTCTTTCTAAAAATATTAAAAATAAAAGGGTTAAGGTAGAGTAGAGTAGTAAAAAATGAATAAAAGGGTTTAGGTTGGGAAAGATGAAAGGGTTTGTTGTTTTTTTTAAAAAAGTTTGTTGAAGGTATGTGTTTTAAACTTTGATCAATGCTCAAAATTCTATTGAAAGTAAGGTAGAATAGTATGCATAAATAGTTAGTAAATCAGTTGTTCGGGTATATTTTTTAAATAAAGTATTTAATCAAACTTTTTATTTTTTGATGTTTGTTAATAATGTGTATTGGTATAGCTAACCTTAGAGATTACTGTTGTTAGATTAGTATAGCTATCTTTAATTGATTAATTAGGGGTAATGTTTTCGTTTATTTTGAAACATATTAATTAAGGAGAATGTTAAAACCATAATTACCTTATAAATAGTAGTATTCATCTATTTTTTAACTCAGGTAGGAGAATTGGCCGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGTAACTCTACATTTCATTTTACTAACTTTTAGTTAATGTTTTTTTTAGAATTATAAAGAATTAAAAAAAATTGAGCTCATAGTTTAAATTCAGGGTGACCATCTAATCTAGGATTTAATATCCTAAAAGTTTCCTCAACACTTAAATATTGTAGGGTCAGACGGATTGTCCTGTGACCGATTAGACAAGGTGCGTGTTAGTTGGACCGAACACTCACGAATACCAAAAAAAAAAAAATTAAAAAGTTCAAAATTTTTAAAATCACTAAAACTATAGTTTACAATATTATTTTAAAAGTCATCTCGATTCTCAAATTCACTTGTAATTAATTTTAGGAAAATGATTACCTCTAAGTTGCACATATTTCTATGCCATCCTCATTTTTTACATGGTAGAAAAAGAACCATTTGATTTTTTAACTAAAATTGAACAAATTTTAAAATATACCGGAAGCAAAATGATAGTATTTTAACCTAATTTGAATTATTCATCATAGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCATTGGACCAGCAATAGTGAAACGGCAGTTCAAAGGATTATGGGTTTACATAGTAGGACCGTTGATCGGAGCGGTCACCGGAGGATTTGCCTATAACCTAATTAGATTCACAGACAAACCACTGCGGGAGATCGCCAAAAGTAGCTCATTCCTCACCGGCAGCCAGAAATCATAACTGCCGGCCGACGACTCTTCACCACCACCATCTTTTAAAGACTTTAACTTACAGAAGCAGCCAAGTCAAGCTTGTGAGTGTGTTCATCATTCATTTATGTGTATAATTTGTTAACTCAATTTATCATTCATTTAAAAATCTTTTACCATTTAGCCAAACCATTATTTGTTTGATTAAATATATTGATGCTTAGTGTTAGGACTTTTTGTTCTTTAGCCATTGAATTGGATTTGTTCCCTACTGTTTGAGAGTAATTTTATAATAGTTAAAATTA GTTCCTTCCAAGTTCCAACTAGTGAAACTAACAAAACTTTCCTCAAAAAAAGGGAAGAAAAAAGGGACTAATCAAAAGGAGAAATTCAACTTTCAAGTCGAGAAAAAAAAATAAAAAAATAGAAAAGAGAGAGGCAAACCGTGATATCGTTCTAATCAGAAGCGTTCTTCTTTTCTCAGAATCTGAGAATCAATGGCGACAAAGATCGACGGAATCGAAGAGGAAGGAATTTCAAAGCTCGAAGAAGGCACTCTCGTTTCCGCCGTCACCCGTCTCTGTCCCTCGACTTCGGTCGTAATCATCCAAAAGGTTATCGCGGAGGTGATCGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGCGGTGAACAAAATATACGGATCAGTGACGTTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTGATGGTAATGGTGTATTCGGTGGGACACATCTCTGGAGCGCACTTCAATCCTGCTGTTACTCTCACCTTCGCACTTTTTCGTCGCTTCCCCTTCTGCCAGGTACCAATATACATAGGAGCTCAAGTAATGGGGTCCCTTCTGGCAAGCTGCACATTGGATCTAATGCTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATCTCCAATCTTTGGTTCTTGAAATTATCATAACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTAGGAGAATTGGCCGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCATTGGACCAGCAATAGTGAAACGGCAGTTCAAAGGATTATGGGTTTACATAGTAGGACCGTTGATCGGAGCGGTCACCGGAGGATTTGCCTATAACCTAATTAGATTCACAGACAAACCACTGCGGGAGATCGCCAAAAGTAGCTCATTCCTCACCGGCAGCCAGAAATCATAACTGCCGGCCGACGACTCTTCACCACCACCATCTTTTAAAGACTTTAACTTACAGAAGCAGCCAAGTCAAGCTTGTGAGTGTGTTCATCATTCATTTATGTGTATAATTTGTTAACTCAATTTATCATTCATTTAAAAATCTTTTACCATTTAGCCAAACCATTATTTGTTTGATTAAATATATTGATGCTTAGTGTTAGGACTTTTTGTTCTTTAGCCATTGAATTGGATTTGTTCCCTACTGTTTGAGAGTAATTTTATAATAGTTAAAATTA ATGGCGACAAAGATCGACGGAATCGAAGAGGAAGGAATTTCAAAGCTCGAAGAAGGCACTCTCGTTTCCGCCGTCACCCGTCTCTGTCCCTCGACTTCGGTCGTAATCATCCAAAAGGTTATCGCGGAGGTGATCGGAACGTACTTCGTGATCTTCACCGGATGTGGAGCGGTGGCGGTGAACAAAATATACGGATCAGTGACGTTTCCGGGAATCTGTGTGGTTTGGGGATTGATTGTGATGGTAATGGTGTATTCGGTGGGACACATCTCTGGAGCGCACTTCAATCCTGCTGTTACTCTCACCTTCGCACTTTTTCGTCGCTTCCCCTTCTGCCAGGTACCAATATACATAGGAGCTCAAGTAATGGGGTCCCTTCTGGCAAGCTGCACATTGGATCTAATGCTTGAAGTGACCCCGGAAGCCTTCTTTGGGACAGTGCCCGTTGGATCCAATCTCCAATCTTTGGTTCTTGAAATTATCATAACATTTCTCTTGATGTTTGTCATCTCTGGCGTCTCCACTGATAACAGAGCCGTAGGAGAATTGGCCGGAATTGTGGTTGGAATGACCATTCTCTTGAATGTTTTCGTCGCCGGGCCGATTTCGGGAGCTTCTATGAATCCAGCTAGGAGCATTGGACCAGCAATAGTGAAACGGCAGTTCAAAGGATTATGGGTTTACATAGTAGGACCGTTGATCGGAGCGGTCACCGGAGGATTTGCCTATAACCTAATTAGATTCACAGACAAACCACTGCGGGAGATCGCCAAAAGTAGCTCATTCCTCACCGGCAGCCAGAAATCATAA MATKIDGIEEEGISKLEEGTLVSAVTRLCPSTSVVIIQKVIAEVIGTYFVIFTGCGAVAVNKIYGSVTFPGICVVWGLIVMVMVYSVGHISGAHFNPAVTLTFALFRRFPFCQVPIYIGAQVMGSLLASCTLDLMLEVTPEAFFGTVPVGSNLQSLVLEIIITFLLMFVISGVSTDNRAVGELAGIVVGMTILLNVFVAGPISGASMNPARSIGPAIVKRQFKGLWVYIVGPLIGAVTGGFAYNLIRFTDKPLREIAKSSSFLTGSQKS
BLAST of Lsi05G003090 vs. Swiss-Prot
Match: NIP1_NICAL (Probable aquaporin NIP-type OS=Nicotiana alata PE=2 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 1.2e-101 Identity = 194/266 (72.93%), Postives = 227/266 (85.34%), Query Frame = 1
BLAST of Lsi05G003090 vs. Swiss-Prot
Match: NIP41_ARATH (Putative aquaporin NIP4-1 OS=Arabidopsis thaliana GN=NIP4-1 PE=3 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 2.0e-98 Identity = 186/269 (69.14%), Postives = 224/269 (83.27%), Query Frame = 1
BLAST of Lsi05G003090 vs. Swiss-Prot
Match: NIP42_ARATH (Probable aquaporin NIP4-2 OS=Arabidopsis thaliana GN=NIP4-2 PE=2 SV=2) HSP 1 Score: 357.5 bits (916), Expect = 1.3e-97 Identity = 184/269 (68.40%), Postives = 222/269 (82.53%), Query Frame = 1
BLAST of Lsi05G003090 vs. Swiss-Prot
Match: NIP11_ORYSJ (Aquaporin NIP1-1 OS=Oryza sativa subsp. japonica GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.4e-83 Identity = 158/232 (68.10%), Postives = 190/232 (81.90%), Query Frame = 1
BLAST of Lsi05G003090 vs. Swiss-Prot
Match: NIP11_MAIZE (Aquaporin NIP1-1 OS=Zea mays GN=NIP1-1 PE=2 SV=1) HSP 1 Score: 309.7 bits (792), Expect = 3.2e-83 Identity = 160/256 (62.50%), Postives = 198/256 (77.34%), Query Frame = 1
BLAST of Lsi05G003090 vs. TrEMBL
Match: A0A0A0LA39_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G345890 PE=3 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.6e-126 Identity = 235/269 (87.36%), Postives = 252/269 (93.68%), Query Frame = 1
BLAST of Lsi05G003090 vs. TrEMBL
Match: U5FKD0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s03060g PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 2.8e-102 Identity = 200/276 (72.46%), Postives = 228/276 (82.61%), Query Frame = 1
BLAST of Lsi05G003090 vs. TrEMBL
Match: A0A061EGH1_THECC (NOD26-like intrinsic protein 4,1 OS=Theobroma cacao GN=TCM_019213 PE=3 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 3.1e-101 Identity = 192/268 (71.64%), Postives = 225/268 (83.96%), Query Frame = 1
BLAST of Lsi05G003090 vs. TrEMBL
Match: A0A087GTR9_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA6G353400 PE=3 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 1.4e-98 Identity = 188/267 (70.41%), Postives = 228/267 (85.39%), Query Frame = 1
BLAST of Lsi05G003090 vs. TrEMBL
Match: A0A067FMQ8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g040755mg PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 4.1e-98 Identity = 183/242 (75.62%), Postives = 212/242 (87.60%), Query Frame = 1
BLAST of Lsi05G003090 vs. TAIR10
Match: AT5G37810.1 (AT5G37810.1 NOD26-like intrinsic protein 4;1) HSP 1 Score: 360.1 bits (923), Expect = 1.1e-99 Identity = 186/269 (69.14%), Postives = 224/269 (83.27%), Query Frame = 1
BLAST of Lsi05G003090 vs. TAIR10
Match: AT5G37820.1 (AT5G37820.1 NOD26-like intrinsic protein 4;2) HSP 1 Score: 357.5 bits (916), Expect = 7.4e-99 Identity = 184/269 (68.40%), Postives = 222/269 (82.53%), Query Frame = 1
BLAST of Lsi05G003090 vs. TAIR10
Match: AT4G18910.1 (AT4G18910.1 NOD26-like intrinsic protein 1;2) HSP 1 Score: 295.8 bits (756), Expect = 2.7e-80 Identity = 151/241 (62.66%), Postives = 189/241 (78.42%), Query Frame = 1
BLAST of Lsi05G003090 vs. TAIR10
Match: AT4G19030.1 (AT4G19030.1 NOD26-like major intrinsic protein 1) HSP 1 Score: 275.0 bits (702), Expect = 4.9e-74 Identity = 136/241 (56.43%), Postives = 180/241 (74.69%), Query Frame = 1
BLAST of Lsi05G003090 vs. TAIR10
Match: AT1G31885.1 (AT1G31885.1 NOD26-like intrinsic protein 3;1) HSP 1 Score: 245.0 bits (624), Expect = 5.4e-65 Identity = 125/237 (52.74%), Postives = 166/237 (70.04%), Query Frame = 1
BLAST of Lsi05G003090 vs. NCBI nr
Match: gi|659114474|ref|XP_008457069.1| (PREDICTED: probable aquaporin NIP-type [Cucumis melo]) HSP 1 Score: 473.8 bits (1218), Expect = 2.0e-130 Identity = 243/269 (90.33%), Postives = 257/269 (95.54%), Query Frame = 1
BLAST of Lsi05G003090 vs. NCBI nr
Match: gi|449464154|ref|XP_004149794.1| (PREDICTED: probable aquaporin NIP-type [Cucumis sativus]) HSP 1 Score: 460.3 bits (1183), Expect = 2.3e-126 Identity = 235/269 (87.36%), Postives = 252/269 (93.68%), Query Frame = 1
BLAST of Lsi05G003090 vs. NCBI nr
Match: gi|729306309|ref|XP_010528527.1| (PREDICTED: putative aquaporin NIP4-1 [Tarenaya hassleriana]) HSP 1 Score: 381.7 bits (979), Expect = 1.0e-102 Identity = 194/266 (72.93%), Postives = 226/266 (84.96%), Query Frame = 1
BLAST of Lsi05G003090 vs. NCBI nr
Match: gi|566211041|ref|XP_006372594.1| (hypothetical protein POPTR_0017s03060g [Populus trichocarpa]) HSP 1 Score: 379.8 bits (974), Expect = 4.0e-102 Identity = 200/276 (72.46%), Postives = 228/276 (82.61%), Query Frame = 1
BLAST of Lsi05G003090 vs. NCBI nr
Match: gi|1009126559|ref|XP_015880221.1| (PREDICTED: probable aquaporin NIP-type [Ziziphus jujuba]) HSP 1 Score: 377.9 bits (969), Expect = 1.5e-101 Identity = 192/270 (71.11%), Postives = 229/270 (84.81%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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