Lsi05G002810 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002810
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	MADS-box transcription factor family protein
Location	chr05 : 3677601 .. 3678353 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGAAAATTGAGTTTGAATCTGATTCCGAATCGGGAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCCACGCTTTGTGACGTTCGAACCTGCCTTCTCATCCATGGCCCTGCTTCTTCCCCAACTGAAGATCCTTCTCAATCCGACCTGGAATTTCACACTTGGCCTTTCAATCGCACTGACCTTGAAGCTATGATCCGAGCCTACAAGATCACCTCCTCCGGTAATTTCCAGAAACGCAAGTGTTACGGTTTGACTGATTTTTTCTCGGATCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTGAGAAAGTTGAGGAAGTTATGTGCCCTAAGTGGGACGAGCGGCTTGAGCGTTTGTCGGAATACGAATTGAGAGAGTTCATGGAAGGACTGGATGCGAAAATTGAAGCCGCTAATGGAATGATCGATTTCATGGAATTAGCCGATTACGAAGATCTGTTTGGCGAGCTATGTTCGGAAAATACAGTCAATCCTCCTCCTCCTCCTCCTCCAGTACTGAATCGGACTAGCCCTAATGAAGAAGATGTGGCGATGGATGAATTCTACAATATTAGGTATCTTCAAATGGTGTTGGGGGAAGAGGAAGAAGATAAGTACATGGCTCATTACGCAAATCTGATGAAGGATGAGTTTGATTATTGCAATAATATTGAGCATTTGATGATGCCCATCGGTAACTTCTAA

mRNA sequence

ATGGGAAGAGGAAAATTGAGTTTGAATCTGATTCCGAATCGGGAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCCACGCTTTGTGACGTTCGAACCTGCCTTCTCATCCATGGCCCTGCTTCTTCCCCAACTGAAGATCCTTCTCAATCCGACCTGGAATTTCACACTTGGCCTTTCAATCGCACTGACCTTGAAGCTATGATCCGAGCCTACAAGATCACCTCCTCCGGTAATTTCCAGAAACGCAAGTGTTACGGTTTGACTGATTTTTTCTCGGATCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTGAGAAAGTTGAGGAAGTTATGTGCCCTAAGTGGGACGAGCGGCTTGAGCGTTTGTCGGAATACGAATTGAGAGAGTTCATGGAAGGACTGGATGCGAAAATTGAAGCCGCTAATGGAATGATCGATTTCATGGAATTAGCCGATTACGAAGATCTGTTTGGCGAGCTATGTTCGGAAAATACAGTCAATCCTCCTCCTCCTCCTCCTCCAGTACTGAATCGGACTAGCCCTAATGAAGAAGATGTGGCGATGGATGAATTCTACAATATTAGGTATCTTCAAATGGTGTTGGGGGAAGAGGAAGAAGATAAGTACATGGCTCATTACGCAAATCTGATGAAGGATGAGTTTGATTATTGCAATAATATTGAGCATTTGATGATGCCCATCGGTAACTTCTAA

Coding sequence (CDS)

ATGGGAAGAGGAAAATTGAGTTTGAATCTGATTCCGAATCGGGAATCTCGAATCTCAACCTTCAAGAAGAGGAAGAACAGTTTGATGAAGAAGGCTTACGAGCTCTCCACGCTTTGTGACGTTCGAACCTGCCTTCTCATCCATGGCCCTGCTTCTTCCCCAACTGAAGATCCTTCTCAATCCGACCTGGAATTTCACACTTGGCCTTTCAATCGCACTGACCTTGAAGCTATGATCCGAGCCTACAAGATCACCTCCTCCGGTAATTTCCAGAAACGCAAGTGTTACGGTTTGACTGATTTTTTCTCGGATCGGAAGAGGAAAATCGAATCGGAGACGTGTAAGCTTCGTGAGAAAGTTGAGGAAGTTATGTGCCCTAAGTGGGACGAGCGGCTTGAGCGTTTGTCGGAATACGAATTGAGAGAGTTCATGGAAGGACTGGATGCGAAAATTGAAGCCGCTAATGGAATGATCGATTTCATGGAATTAGCCGATTACGAAGATCTGTTTGGCGAGCTATGTTCGGAAAATACAGTCAATCCTCCTCCTCCTCCTCCTCCAGTACTGAATCGGACTAGCCCTAATGAAGAAGATGTGGCGATGGATGAATTCTACAATATTAGGTATCTTCAAATGGTGTTGGGGGAAGAGGAAGAAGATAAGTACATGGCTCATTACGCAAATCTGATGAAGGATGAGTTTGATTATTGCAATAATATTGAGCATTTGATGATGCCCATCGGTAACTTCTAA

Protein sequence

MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQSDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKVEEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELADYEDLFGELCSENTVNPPPPPPPVLNRTSPNEEDVAMDEFYNIRYLQMVLGEEEEDKYMAHYANLMKDEFDYCNNIEHLMMPIGNF

Homology

[Close]

BLAST of Lsi05G002810 vs. Swiss-Prot
Match: AGL82_ARATH (Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 1.4e-13
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 1


Query: 6   LSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQSDLEF 65
           + L  I N ++RI+T+KKRK SL KKA E STLC V TCL+++GP  +     S+ ++  
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEI-- 65

Query: 66  HTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKVEEVMC 125
             WP + T + A+IR YK T S + +K     +  F +D  +  E  T K R K  E   
Sbjct: 66  --WPKDETKVRAIIRKYKDTVSTSCRKET--NVETFVNDVGKGNEVVT-KKRVK-RENKY 125

Query: 126 PKWDERLERLSEYELREFMEGLDAKIEAA 155
             W+E+L++ S  +L      +D+K+  A
Sbjct: 126 SSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Lsi05G002810 vs. Swiss-Prot
Match: AGL19_ARATH (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.8e-08
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           M RGK  +  I N  SR  TF KR+N L+KKA+ELS LCD    L+I  P S        
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSK------- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAY--KITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLRE 120
                  + F+ + + A I  Y  +I   GN  KR         +D  ++   ET  L +
Sbjct: 61  ------LYEFSSSSIAATIERYQRRIKEIGNNHKR---------NDNSQQARDETSGLTK 120

Query: 121 KVEEVMCPK---WDERLERLSEYELREFMEGLDAKI 152
           K+E++   K     E ++  S  EL++    LD  +
Sbjct: 121 KIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSL 134

[Close]

BLAST of Lsi05G002810 vs. Swiss-Prot
Match: AGL80_ARATH (Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1


Query: 1  MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGP-ASSPTEDPS 60
          M R K+ L  I N  SR +TFKKRK  LMKK +ELSTLC +  C +I+ P  ++P   PS
Sbjct: 1  MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61 QSDL-----EFHTWP 70
           S +     EF T P
Sbjct: 61 NSGVQRVVSEFRTLP 75

[Close]

BLAST of Lsi05G002810 vs. Swiss-Prot
Match: AGL92_ARATH (Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana GN=AGL92 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 2.6e-07
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 1


Query: 3  RGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQSD 62
          R K  L LIP+R  R +TF+KR   + KK +EL+TLCD++ C +I+ P  +PT  PS   
Sbjct: 2  RTKTKLVLIPDRHFRRATFRKRNAGIRKKLHELTTLCDIKACAVIYSPFENPTVWPSTEG 61

Query: 63 LE 65
          ++
Sbjct: 62 VQ 63

[Close]

BLAST of Lsi05G002810 vs. Swiss-Prot
Match: MADS5_ORYSJ (MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 4.5e-07
Identity = 28/47 (59.57%), Postives = 33/47 (70.21%), Query Frame = 1


Query: 1  MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLI 48
          MGRGK+ L  I N+ SR  TF KR+N L+KKAYELS LCD    L+I
Sbjct: 1  MGRGKVELKRIENKISRQVTFAKRRNGLLKKAYELSVLCDAEVALII 47

[Close]

BLAST of Lsi05G002810 vs. TrEMBL
Match: A0A0A0LME6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.1e-34
Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRGKLS+ LI N +SR +TF KRK SL++KAYELSTLCDVR C+++HG    P +   Q
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHG----PNQSNDQ 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
           S L+ HTWP +  ++  MI +YK T+    + RK +GL DFFS+RK+K+E++  KLR+ V
Sbjct: 61  SPLQLHTWPPSADEVNNMIASYK-TNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDV 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELADY 167
            E   P WDERL+ L E +LR  M  LD+KIE A   I+     +Y
Sbjct: 121 SEERFPSWDERLDHLLEDQLRVLMVELDSKIEIAKKRIEIATENNY 161

[Close]

BLAST of Lsi05G002810 vs. TrEMBL
Match: A0A0A0LAL9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258140 PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 8.4e-29
Identity = 101/228 (44.30%), Postives = 125/228 (54.82%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRG LSL LIPN +SR +TF KRK SL+KKAYELSTLCDV+TCL I         DPS 
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDC-----DPS- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQK-RKCYGLTDFFSDRKRKIESETCKLREK 120
               F TWP N   +  MIR+YK   S +F K    Y L  FFSDRK KI + T KL   
Sbjct: 61  --THFETWPPNHHQIHQMIRSYK---SHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHN 120

Query: 121 VEEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELADYEDLFGELCSENTV 180
           V           ++  SE++L E ++ LD+KI  AN MI+FME ADY+ L  +    +T 
Sbjct: 121 V-----------VDHQSEHQLMELLDALDSKIRVANDMIEFME-ADYDHLIDQAIGMDT- 180

Query: 181 NPPPPPPPVLNRTSPNEEDV--AMDEF--YNIRYLQMVLGEEEEDKYM 224
             PP        T  N  D+    DEF  YN+   Q +L    EDK++
Sbjct: 181 --PPSQTEDEETTQFNVSDLFNEPDEFEEYNVEGFQSLL----EDKFL 198

[Close]

BLAST of Lsi05G002810 vs. TrEMBL
Match: A0A022RU25_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026432mg PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.1e-23
Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRGKL + LI N + R + F+KRK  ++K A ELSTLC V+  ++I+        +P Q
Sbjct: 1   MGRGKLRMELIKNEKVRNAAFEKRKKGIVKSANELSTLCGVQIGMIIN--------EPGQ 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
           ++ E   WP NR  +  +I +YK  S+GN  +   Y L  FF ++  KIE E  KLR++ 
Sbjct: 61  NNNEPTIWPANREVITKLIDSYKSKSAGNDCRYGTYNLPAFFKNQTEKIEDEVNKLRKRT 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMID 160
            EV  PKWDERL+  SE EL++F   L AKIE+A   I+
Sbjct: 121 REVKYPKWDERLDTCSEDELKDFAGKLTAKIESARVRIN 151

[Close]

BLAST of Lsi05G002810 vs. TrEMBL
Match: M5XI05_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027181mg PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.4e-23
Identity = 62/153 (40.52%), Postives = 93/153 (60.78%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRG+L + LI N  +R +TF+KR+  +MKKAYE STLC++  C++I+GP    T+ P  
Sbjct: 1   MGRGRLKMELIANERARKTTFQKRRKGMMKKAYEFSTLCELDVCMIIYGP--KQTDRPP- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
              E HTWP NR +++ +I  YK  S      +K + L+D   DRK K+  +  + R+++
Sbjct: 61  ---ELHTWPENRDEVDRIINKYK-ASIMRKPAKKTFDLSDLLRDRKTKVHVDIYRARKEM 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEA 154
            E   P WDER+E  SE +L   +  LD K+E+
Sbjct: 121 YEAKYPTWDERIESFSENQLEALLNTLDTKLES 146

[Close]

BLAST of Lsi05G002810 vs. TrEMBL
Match: M5X3X5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.4e-23
Identity = 63/153 (41.18%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRG+L + LI N  SR +TF+KR   +MKKAYE STLC+V  C++I+GP    T+ P  
Sbjct: 1   MGRGRLKMELIANERSRKTTFQKRSKGMMKKAYEFSTLCEVDVCIIIYGP--KLTDRPP- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
              E  TWP N   ++ +I  YK  S+ +   +K + L+D   DRK K+ ++  + R+++
Sbjct: 61  ---ELQTWPQNSEQVDRIINKYK-ASTMSKPAKKTFDLSDLLMDRKNKVYADIYRARKEM 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEA 154
            E   P WDER+E  SE +L   ++ LDAK+E+
Sbjct: 121 YEAKYPTWDERIESFSENQLEALLDKLDAKLES 146

[Close]

BLAST of Lsi05G002810 vs. TAIR10
Match: AT5G58890.1 (AT5G58890.1 AGAMOUS-like 82)

HSP 1 Score: 78.2 bits (191), Expect = 8.1e-15
Identity = 54/149 (36.24%), Postives = 82/149 (55.03%), Query Frame = 1


Query: 6   LSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQSDLEF 65
           + L  I N ++RI+T+KKRK SL KKA E STLC V TCL+++GP  +     S+ ++  
Sbjct: 6   VDLQRIANDKTRITTYKKRKASLYKKAQEFSTLCGVETCLIVYGPTKATDVVISEPEI-- 65

Query: 66  HTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKVEEVMC 125
             WP + T + A+IR YK T S + +K     +  F +D  +  E  T K R K  E   
Sbjct: 66  --WPKDETKVRAIIRKYKDTVSTSCRKET--NVETFVNDVGKGNEVVT-KKRVK-RENKY 125

Query: 126 PKWDERLERLSEYELREFMEGLDAKIEAA 155
             W+E+L++ S  +L      +D+K+  A
Sbjct: 126 SSWEEKLDKCSREQLHGIFCAVDSKLNEA 146

[Close]

BLAST of Lsi05G002810 vs. TAIR10
Match: AT5G55690.1 (AT5G55690.1 MADS-box transcription factor family protein)

HSP 1 Score: 75.5 bits (184), Expect = 5.3e-14
Identity = 47/154 (30.52%), Postives = 81/154 (52.60%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGR  + +  I N ++RI+T+KKRK  L KKA E STLC V TC++++GP+ +  E   +
Sbjct: 1   MGRKMVKMTRITNEKTRITTYKKRKACLYKKASEFSTLCGVDTCVIVYGPSRAGDEMVME 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
            +L    WP + + +  ++  Y+ T+S +    K Y + +       K+E  T   +   
Sbjct: 61  PEL----WPKDGSKVREILTKYRDTASSSC--TKTYTVQECLEKNNTKVEKPTIATK--- 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAA 155
                P WD++L++ S  +L      ++ KI+ A
Sbjct: 121 ----YPTWDKKLDQCSLNDLYAVFMAVENKIQEA 141

[Close]

BLAST of Lsi05G002810 vs. TAIR10
Match: AT4G22950.1 (AT4G22950.1 AGAMOUS-like 19)

HSP 1 Score: 61.2 bits (147), Expect = 1.0e-09
Identity = 49/156 (31.41%), Postives = 71/156 (45.51%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           M RGK  +  I N  SR  TF KR+N L+KKA+ELS LCD    L+I  P S        
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSK------- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAY--KITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLRE 120
                  + F+ + + A I  Y  +I   GN  KR         +D  ++   ET  L +
Sbjct: 61  ------LYEFSSSSIAATIERYQRRIKEIGNNHKR---------NDNSQQARDETSGLTK 120

Query: 121 KVEEVMCPK---WDERLERLSEYELREFMEGLDAKI 152
           K+E++   K     E ++  S  EL++    LD  +
Sbjct: 121 KIEQLEISKRKLLGEGIDACSIEELQQLENQLDRSL 134

[Close]

BLAST of Lsi05G002810 vs. TAIR10
Match: AT5G26580.1 (AT5G26580.1 AGAMOUS-like-34)

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-09
Identity = 29/50 (58.00%), Postives = 36/50 (72.00%), Query Frame = 1


Query: 1  MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGP 51
          MG  K+ L+LI N  SR ++F KRKN +MKK YELSTLC V+ C LI+ P
Sbjct: 1  MGMKKVKLSLIANEISRETSFMKRKNGIMKKLYELSTLCGVQACTLIYSP 50

[Close]

BLAST of Lsi05G002810 vs. TAIR10
Match: AT5G48670.1 (AT5G48670.1 AGAMOUS-like 80)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 35/75 (46.67%), Postives = 44/75 (58.67%), Query Frame = 1


Query: 1  MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGP-ASSPTEDPS 60
          M R K+ L  I N  SR +TFKKRK  LMKK +ELSTLC +  C +I+ P  ++P   PS
Sbjct: 1  MTRKKVKLAYISNDSSRKATFKKRKKGLMKKVHELSTLCGITACAIIYSPYDTNPEVWPS 60

Query: 61 QSDL-----EFHTWP 70
           S +     EF T P
Sbjct: 61 NSGVQRVVSEFRTLP 75

[Close]

BLAST of Lsi05G002810 vs. NCBI nr
Match: gi|778674258|ref|XP_011650173.1| (PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus])

HSP 1 Score: 152.9 bits (385), Expect = 7.3e-34
Identity = 83/166 (50.00%), Postives = 111/166 (66.87%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRGKLS+ LI N +SR +TF KRK SL++KAYELSTLCDVR C+++HG    P +   Q
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVVVHG----PNQSNDQ 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
           S L+ HTWP +  ++  MI +YK T+    + RK +GL DFFS+RK+K+E++  KLR+ V
Sbjct: 61  SPLQLHTWPPSADEVNNMIASYK-TNCLYKRVRKSFGLIDFFSERKKKVETDMSKLRKDV 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELADY 167
            E   P WDERL+ L E +LR  M  LD+KIE A   I+     +Y
Sbjct: 121 SEERFPSWDERLDHLLEDQLRVLMVELDSKIEIAKKRIEIATENNY 161

[Close]

BLAST of Lsi05G002810 vs. NCBI nr
Match: gi|659121915|ref|XP_008460878.1| (PREDICTED: MADS-box protein SOC1-like [Cucumis melo])

HSP 1 Score: 152.5 bits (384), Expect = 9.6e-34
Identity = 82/159 (51.57%), Postives = 109/159 (68.55%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRGKLS+ LI N +SR +TF KRK SL++KAYELSTLCDVR C+ +HG    P +   Q
Sbjct: 1   MGRGKLSMKLISNEKSRKTTFHKRKASLLRKAYELSTLCDVRVCVFVHG----PNQSNDQ 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
           S L+ HTWP    ++ +MI +YK T+  + + RK +GL DFFS+RK+K+E++  KLR+ V
Sbjct: 61  SPLQLHTWPPCPDEVNSMIASYK-TNCLHKRARKAFGLIDFFSERKKKVETDMSKLRKDV 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMID 160
            E    KWDERL+ L E +LR  M  LD+KIE A   I+
Sbjct: 121 AEARFTKWDERLDHLLEDQLRVLMMELDSKIEIAKKRIE 154

[Close]

BLAST of Lsi05G002810 vs. NCBI nr
Match: gi|449455824|ref|XP_004145650.1| (PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus])

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-28
Identity = 101/228 (44.30%), Postives = 125/228 (54.82%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRG LSL LIPN +SR +TF KRK SL+KKAYELSTLCDV+TCL I         DPS 
Sbjct: 1   MGRGILSLKLIPNPKSRRTTFLKRKKSLIKKAYELSTLCDVQTCLFIASDC-----DPS- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQK-RKCYGLTDFFSDRKRKIESETCKLREK 120
               F TWP N   +  MIR+YK   S +F K    Y L  FFSDRK KI + T KL   
Sbjct: 61  --THFETWPPNHHQIHQMIRSYK---SHSFTKPNSSYDLNRFFSDRKNKILTNTSKLLHN 120

Query: 121 VEEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELADYEDLFGELCSENTV 180
           V           ++  SE++L E ++ LD+KI  AN MI+FME ADY+ L  +    +T 
Sbjct: 121 V-----------VDHQSEHQLMELLDALDSKIRVANDMIEFME-ADYDHLIDQAIGMDT- 180

Query: 181 NPPPPPPPVLNRTSPNEEDV--AMDEF--YNIRYLQMVLGEEEEDKYM 224
             PP        T  N  D+    DEF  YN+   Q +L    EDK++
Sbjct: 181 --PPSQTEDEETTQFNVSDLFNEPDEFEEYNVEGFQSLL----EDKFL 198

[Close]

BLAST of Lsi05G002810 vs. NCBI nr
Match: gi|694327228|ref|XP_009354489.1| (PREDICTED: agamous-like MADS-box protein AGL80 [Pyrus x bretschneideri])

HSP 1 Score: 120.6 bits (301), Expect = 4.0e-24
Identity = 62/153 (40.52%), Postives = 94/153 (61.44%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRG+L++ LI N  +R +TF+KR   ++KKA E+STLCD+  C++I+GP  S       
Sbjct: 1   MGRGRLNMELITNERARKTTFQKRTKGILKKAGEISTLCDLDVCMIIYGPKQSGRSP--- 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
              E HTWP N +++  +I  YK +++     +K + L+D   DRK K+  +T + R+++
Sbjct: 61  ---ELHTWPRNPSEVNRIINKYKASTTCK-PAKKTFNLSDLLMDRKTKVHVDTYRARKEM 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEA 154
            E   P WDER+E  SE EL   +  LDAK+EA
Sbjct: 121 YEAKYPTWDERIENFSENELELLLNALDAKLEA 146

[Close]

BLAST of Lsi05G002810 vs. NCBI nr
Match: gi|848857034|ref|XP_012827797.1| (PREDICTED: floral homeotic protein PMADS 2-like [Erythranthe guttata])

HSP 1 Score: 119.4 bits (298), Expect = 9.0e-24
Identity = 69/164 (42.07%), Postives = 100/164 (60.98%), Query Frame = 1


Query: 1   MGRGKLSLNLIPNRESRISTFKKRKNSLMKKAYELSTLCDVRTCLLIHGPASSPTEDPSQ 60
           MGRGKL + LI N + R + F+KRK  ++K A ELSTLC V+  ++I+        +P Q
Sbjct: 1   MGRGKLRMELIKNEKVRNAAFEKRKKGIVKSANELSTLCGVQIGMIIN--------EPGQ 60

Query: 61  SDLEFHTWPFNRTDLEAMIRAYKITSSGNFQKRKCYGLTDFFSDRKRKIESETCKLREKV 120
           ++ E   WP NR  +  +I +YK  S+GN  +   Y L  FF ++  KIE E  KLR++ 
Sbjct: 61  NNNEPTIWPANREVITKLIDSYKSKSAGNDCRYGTYNLPAFFKNQTEKIEDEVNKLRKRT 120

Query: 121 EEVMCPKWDERLERLSEYELREFMEGLDAKIEAANGMIDFMELA 165
            EV  PKWDERL+  SE EL++F   L AKIE+A   I+ ++++
Sbjct: 121 REVKYPKWDERLDTCSEDELKDFAGKLTAKIESARVRINSIKVS 156

The following BLAST results are available for this feature:

BLAST of Lsi05G002810 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AGL82_ARATH	1.4e-13	36.24	Agamous-like MADS-box protein AGL82 OS=Arabidopsis thaliana GN=AGL82 PE=1 SV=1	[more]
AGL19_ARATH	1.8e-08	31.41	Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana GN=AGL19 PE=1 SV=1	[more]
AGL80_ARATH	2.0e-07	46.67	Agamous-like MADS-box protein AGL80 OS=Arabidopsis thaliana GN=AGL80 PE=1 SV=1	[more]
AGL92_ARATH	2.6e-07	43.55	Agamous-like MADS-box protein AGL92 OS=Arabidopsis thaliana GN=AGL92 PE=1 SV=1	[more]
MADS5_ORYSJ	4.5e-07	59.57	MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica GN=MADS5 PE=1 SV...	[more]

BLAST of Lsi05G002810 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LME6_CUCSA	5.1e-34	50.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G336070 PE=4 SV=1	[more]
A0A0A0LAL9_CUCSA	8.4e-29	44.30	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G258140 PE=4 SV=1	[more]
A0A022RU25_ERYGU	1.1e-23	43.40	Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a026432mg...	[more]
M5XI05_PRUPE	1.4e-23	40.52	Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa027181mg PE=4 S...	[more]
M5X3X5_PRUPE	2.4e-23	41.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021970mg PE=4 SV=1	[more]

BLAST of Lsi05G002810 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G58890.1	8.1e-15	36.24	AGAMOUS-like 82	[more]
AT5G55690.1	5.3e-14	30.52	MADS-box transcription factor family protein	[more]
AT4G22950.1	1.0e-09	31.41	AGAMOUS-like 19	[more]
AT5G26580.1	3.9e-09	58.00	AGAMOUS-like-34	[more]
AT5G48670.1	1.1e-08	46.67	AGAMOUS-like 80	[more]

BLAST of Lsi05G002810 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674258\|ref\|XP_011650173.1\|	7.3e-34	50.00	PREDICTED: floral homeotic protein DEFICIENS-like [Cucumis sativus]	[more]
gi\|659121915\|ref\|XP_008460878.1\|	9.6e-34	51.57	PREDICTED: MADS-box protein SOC1-like [Cucumis melo]	[more]
gi\|449455824\|ref\|XP_004145650.1\|	1.2e-28	44.30	PREDICTED: agamous-like MADS-box protein AGL3 [Cucumis sativus]	[more]
gi\|694327228\|ref\|XP_009354489.1\|	4.0e-24	40.52	PREDICTED: agamous-like MADS-box protein AGL80 [Pyrus x bretschneideri]	[more]
gi\|848857034\|ref\|XP_012827797.1\|	9.0e-24	42.07	PREDICTED: floral homeotic protein PMADS 2-like [Erythranthe guttata]	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002810.1	Lsi05G002810.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002810	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002810	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G002810	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002810	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002810	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002810	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002810	Watermelon (97103) v1	lsiwmB361
Lsi05G002810	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002810	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002810	Silver-seed gourd	carlsiB158
Lsi05G002810	Silver-seed gourd	carlsiB700
Lsi05G002810	Cucumber (Chinese Long) v3	cuclsiB230
Lsi05G002810	Watermelon (97103) v2	lsiwmbB329
Lsi05G002810	Wax gourd	lsiwgoB431
Lsi05G002810	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002810	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002810	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002810	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002810	Cucurbita moschata (Rifu)	cmolsiB430