Lsi05G002620 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002620
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	LEM3 (Ligand-effect modulator 3) family protein
Location	chr05 : 3335514 .. 3353713 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTTTCTAAAACTTGTTTAGAATAGAAGAGAATTGAGAAAAAAACAAGCGGCATAATAAAAAAAAATGTTTTGAAATAAAATACAAAAAGGAAAAATATGAAAACCGCGCGAAACTACTTCCACTAAATCTCGATAATGGGCGATATGTGTTGGTAGCCTTACCGAAACAAGGAAGTGGGTTCGTGAAGCAAGGGCCACCGATCGGATGAGATTCATCGATCAGGTCTGAGATTGCCTTTTCTAACTTCTTTTTTTGTCTTTTCTATTGAGATTCCTCCATACCCAAATCAAATTTCCCCTTAATTTCGTGTTTCTTTTGTCAGAATCGATCAACCCATATAGGAAAGATAAAAATTTGTTGTAACCCACTGTTCGATTTCGAAAGAAAAGATGATAAAAATTGCAGAAAGATGAGATTGCCGATTAATAACCTTGTTCTCTTCGTTTTGATCTGTAGAAATGAATAATACTCACGGGGCAACGAGCTCGGCGGGTAGAATGCAGCAAGGAAATTCTGATTCGTCCACTCCACCCAAGAAATCGAAGAAACCCAAATGTCATATATTTACTCTCTTTTCCCCCTAGTTTTTGTTTGTTCTGTTTTGTCATTTTGGATTTTGTATATGATCTCTTCCTCTCTATGGATAAATCTCTTGGAAGCGTACCTCTCGACCTATGTTCTCGTACTTCTTCGTTGTTTTTTGGGTATTTTTTTTTGTAAAGTTTATGAGAAGCGTTCTTGTGGAGCCAAATTTTTGGCTTGTGCTTCTGGGTCTGAAATGATTCTGCATCTTTGCATTATAATCGTCTTAAATGCGTTCACTCTAGCATTTTTATGCTTCATTCTCATGTTATGGAGTTCTATATTTTTTTAAAAGTTTTTTCCCCTTCCATATTGATTATGCATGGTCGTTTGGTTTCCGTATACAGTCCCTTCCTCTCTTTGGATTAATCTTTTGGAAGTTTACCTCTTACCCTATGTTCTCGTACTTGTTCGTCCTTATTTGGGTTTGTTTGTATAATTCGTATGAAGAACACCTATGTAGTAATTTTTTAATTTGTGCTTCTGGGTCCATCTGAATTCATGTTTGTGCATCTTTGCATTATAATCATTTTAAATGCTAGCCATTGGAATTCTTCATTCTCATATCATGGAGTTCTATTATGTCTCATTAAAGTAAGGTCAATTCTATTGGCAATGTCATAGGCACTTGGTTGGTGCTCATACTTTATTTTTAATTTGATTGCAGATTCTAGATTTACACAGCAAGAGCTTCCTGCTTGCAAACCAATTCTAACACCAGGATGGGTATCCCTCAAAAAGATTTGAATTTATTTTTTGCTCTGGTCCCTGTCGTAGCATTATGCACTCTTTTTATTTAGTGTCACTAATTGATTTCAGGTTATAACATCCTTCGTTGCTGTTGGCATTATCTTTATCCCCATAGGGATTGCTTCCTTATTTGCATCAGAACAAGTACTTTCTTGTCTGCCTCATCCTTGCAAATATGATATACTATTCAGTTTTTATTTAATTTATTCTTGGACTATTAAATGCTTAACTTGAGCCATATGCTTTCCATGATAAACAGGTTGTTGAAATTGTGGATCAATACGACCATGATTGCCTTCCTTCTGAGTTTCAAGGCGACCCTCTTACGTTTATTAAGGACAGCAAAACTAATAAAACTTGTAGCAGGAAGTTGACTGTAAGTACAGTTTCTATTGTCATTGTTAAAAAGCAGATTGGATTTTGGTTCCTTTTCGTATTTATCTCTTAATTTATCTGTCTTAAACAGTTCTGCGAACTTAATGCTTTTCAGGTTCCTAAACCAATGAAAGGTCCGGTTTACATCTATTATCAGCTTGATAACTTCTATCAAAATCACCGACGGTAAGTAGAAATAAAAAAAATAAACTTGGTAGAGTCTTGAATATGGGAGAAACAAACTGTTTATGAGCAAATAGCAGGTGCTGTTGACTTCATGATTTGCGACATCTATTGAATTATGTGAAATTGGCCTTTCATGTATGATTGAAATAATGGAGTGTTGTTTATCCGGAGAAGAAGAAATACATAATCTGTTGCATAGCTTATTATTTAGAACTTAAGGACACAGTATACAATCTATGAAACCGATCCTATTCAAGTAAGATCATATAACTTTTAAAGTTAAGAAGTGCGTGATTTAATTTGTAAAAGTAAAGATATGAAAATTGTAGTTTAAGGAGCAAACTGGAGGAAATGAACCAAGCTGTTAATCTGTTTACAGCTATGCTTTAAGTTTATGTCATAGTTTACCTTGAAGAGAAATTGGAAGTTAAGAAATTCATTCAAACTTTTCTTCGTTAGGCATCTGTTGCCCAAAATTACAACTCTTGCCGTGTAGTTTGATTTTTATTTATTGATCTCTTGCCATCCTTTGGTTTGTCCACTATGTATTATCATCGCGTTTCACTTGCTTCATGCGTTTCTTATCGATCATGGTAACATTATTTCTATCTAATCCCTCAGCCTGCAAACCTGTTTCTTTAGTTTCCACTTGTCTGGAAATAATACATTAAAATAAGCTTGTGACACATATGAGGTGCAAGCAATTAAGGAATGTTTTAAAGTTCATGAGGCTGCTTTCTACTACAAGGAGGAACTGGGTTCATTTAAAAAAAAATTATTGTATGAATATGAATAAAGCTCAGAAGGGAGGATGCCTTTATTTTAGGAAATTTACCTTCTTGGTCTTTAAGGTTTGGGTAATAGTTTCATTTAGTTACTAAGTTTCAAAATTTTACACTTTCCTCCCTAAAGTTAGGAAATATTTCATTTTATTCCTTTGACCTTCAGTCAACAAAATTGAAAAATGATTTGGCCCTTTTTCTTAAAAAAAAAGAAAACCCTATCTCTCTCCCTCCATCCATCCCCTTTCCCCTCTAACCCTGTTGCTCTTGTACTGTGCCCTCTACCTTCACCACCCTACCCTAGCCATTGGCCCTCACCCTACCATGCCCCCTCCCTCACTCTCTCTTTAGACTTGGAAAAGTTTCCAGATTTGTGGGAGACAAGCCACAATAAGGCGGTGGAAAGCACAAGCACGACAGGAGAGGGAGGTAGGGCACTATGAACCCCTCTTTCTCAGTGTTTTAAACAACTCCTTTGGTGCATACCTAGGCGCTAGATGCAGATCTAGTGTCTTGCCTTAAGGTTCATGGAAGAAGGCACAGATTAAACGCGAGCCTTTTGTTTGGGTCTTGGGACTTCTTTTTTTTTTTTTTTATTATTATTATTATTATTTTTCTTATTTTTCTTATTATTATTATTATTTACAAACACTAAAAAGTAGTTGCATTTGGGTTTGGGTCTTTAGCTGAGACTGTTTTCAAGGAGCAGCGTGCTTGGGCTAAAAAAAGTAAAATTTAGTGGCTTTGGGAAGGGGAGGAAAATTCCAGCTTTTTTCATTGATGGACTTCGGTTCGAAGGAGAAAAAATGTTATTTCTATGTTGGAACATAGTGAGGGGCGTATTCTCCTTAGAGAAGATGAAATTGTTGATGAGATTGTTGGCTTTTACTGCAGCTTATACAAAAAAGATGATAGTACCCGTTTTACCTTTGATGGGTTAGATTAGCGTCCCTGGATATTCAAGCCCCTTTTAAGGAGTCTAAAACTCGAGCTGCAGTCCAAGACTTGGAGAATCTAAAGTCACTTGGGCCGGATGGCAGGATTGGTGAGTTTTATAAAAAATCATGGACATTCTGAAGGGCGATGTATTAAGAGTGTTCCATGAGTTTTTTAAAAACGGAATGATAAACAAACGGTGCAATGAAACATACATTTGCTTGATCCCTAGGAAGAAGAAGGCAACTAGAGCCCGTGAGTATAGGCCTATAAGCTTGGTGACTTCTCTTTACAAAATCATTTCCAAGGTGTCAACCAAGAAAAAAGTCCTCCATTTATTCATGACTACCAAATGGCGTTTGTGGAAGGGAGGCAAATTCTTGACACTATTTTGACAGCTTCAGAATCTTTAGAAGAATGGAAGGCGGTAGGCAAGAAGGGTGCTCTTTTAAAGCTTGATCTTGAAAAGGCGTATGATAAAGTCAATTGGGCTTTTCTTGATGCGATCCTTGAGCTTAAAGGGTTTGGAAATAGATGGAGAAAGTGGATTTGGGGATGCCTCTTGTCTACTAACTTCTCAATTATTATAAATGGTAGACCAAGAGGGAAAATTATGGCTAAAAGAGGCCTTCATCAGGGTGACCCTCTCTTACTCTTTCTTTCACAATCGTTGGTGATGCGTTCAACAATCTTGTTTGGTATTGTAGCGAAAAAAGAGTGATTAAAGGCCTTCTCCTTTGGCAACCCATTGACTGAGGTTACACACCTTCAGTATGGGATGATACTTTAATTTTTTGCTGTTGGAGTGATGAGAGTTTGATGGCGTGGTGGTCTATTGTCAATTTATTCTTTTTGGGTTTGGGCCTTTCCTTAAATATCTCCAAAAAGTTTCTTATTGGGGTCGATCTTAGCTTTGAAGAGACTGATTTTAGTGCATCCATTATGGGTTGCAAAGTTCATAACTTTCCCTTTAGTTACTTGGGGTTTCCCCTTGGTGGTAAACATGCTGCAAAGGTGGCAAGGGAAGCTCTTAAGGAGAAGTTTAAGATGAAGATTGATAAATGGCGTGGTTTGGTTCTCTCCAAAGGGGGTAGATTAACTCTCGCTCAGTTGGTTCTCAATAGCTTGCCGTGTTACTTCTTCTCCTTGATGCAAGCCTCGAAGAGTTATATTAATCGTTTAGAGAAGATTGTTAGAGACTTTGTGTGGAATGGAGGTACTTATAAATTGGCCACCCACCTTGTCAGGTGGAAATGGACCTCTCTCCCTATGATGTACGGGGGGGGGGGGGGGGGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTCAGAATTGGCTCTCTTTGTCAGAAAAATAGTGCTCTTTTGATGAAATAGTTGTGGAGATTTTTCCGTGAAGAGAACGCCCTATGGAGGCGTGTCATTAGTGCTATTTATGGGGTGGATGATCGTGGTTGGAGTTCCCTAGTGCCTAGAGGCAAAAGGAAGTTCAGGTTATGGAGTGGTATTATGAAGCAAAAGGGGCAGTTATTTGATTCTGTTGAGTTTGGGGTGGGAGATGGTAGAAACGTAAGATTCTGGGAAGATTGTTGGTGTGCTCCTCAACCTCTTGCGACTTTGTACCATGACATTTACATTATTTCCATAAAAAAGGAAGTTGTTGTCGCGGACTGTTGGAATGATCTGAACCAAGCTTGGGATTTGGGGTTGAGGAGAAGACTTTTTGATAGAGAAGTTGGTAGCTCTATTGCTCTTGCTCAGTTGCTGAATTCTTGGGTGGTAAACAGAAACAAGGATAGGTTATATTGGAAGAACGACGCCTCGGGTAAGTTTTCTACCAACTCCACGTTTCTAAAGCTGACTATGGGTGTCTCGAAAAATAATTTCCCTATGGTCAACCTTATCTGGAAGTTAAAAATTCCTAAAAAAGTGAAGATTTTCCTCTGGTCCTTTGCTTATAGAAGTCTAAATACTCATGAGAAGCTTCAAAGGAAGTTCCCAAATTGGTCTCTCTCCCCCTCCATTTGTTGTCTTTGTCTTAGAGAAATGGAAACTGCGAGTCACTTGTTTTTACATTGTGAGTTCGCTTCTAAAGGGTGGAGCATTCTTCTTAATACTTTTGGGTTGGTTTGTTGTGCCCCTAAGAAGATTGACAATTGGATGATGGATGGTCTTGATGGTGGGAGCTTTTGTGTAGAGGAAAAATTCTCTGGAGATGTGCTACTTGTGCGCTTTTATGGTGTCTTTGGAAAGAAAGAAATTGCAGGATATTTAAAGATAAGTTTACTTCCTTTGATTCTTTTGGAGCTCTTGTTCATCATACAACCTCTCGATGGTGTACAAATTACACAAATTTATTTTGTAATTATAGCCTTCTTATGATTATTAACAATGGGAGGGCTCTTCTTGTTTAGTTCTGTGGGAGGGGGTTTCCTTAACCCCTTGCCCTTAGGTTGTTCTTTTGGATCTTTTGATAATATTATCCTTTGTTTCTTATTAAAAAAAAAAAACACTAAATGTAAAAATCCTTGTGTTTAGGGTTTTTTTTTTCATTAATTTTAGGAAACAAAATTTACTAATCTTAAATGCAAAAATCCTCATGTTTTTGTGTGTGTGTGTGTATTGCGCCTCACAAAATAAATTCTTGCGCTTAAAGCTCGAAAGGCTATTGCTCTTCATTGCGCATTGAGCTTTAAAAAACACTACTCTTTCAAATTTGGACGACAATTTGCATCTCGATTTGGTCATTGATGGGGTTGATGAGATCGATCATGAATGGAGATGTGGAAAGGGTTGGCCATTTGCAGATACTTTGGTTCCATTTTGCCAAAAATATGAGGTTCAATTTTAGGTCCCCTTAGGTAACACCGTCGTCTTATCTTTGATAGCATATGAGAATTCCTTGAAGAATGGAAAATAGTGAAGTTAAAGATCCAATTAGAAAAAGTCGCAACAAAGCTCTGGAAGAGAATTGTGGAGATAAACTATTTATCATTGATGAGACTAAATTGGTTGACGACCTTTTTGGTGCAAAACAAAGCACCCTTTCAAATATTTATCTTATATTTTTTAGTTACCAATTGACGATTTCTTTTGTAATCATTTTTAATTGTTTGGGGTGTTCCCTTGATTTCATTTATTAATGAAATATTTCTTTTACTAAATTGGTTGACAACCTTTGTCAAGGGGCCTCGAAAGGTTAGTGGAGGTCCTTCAGTTCTATGAGATGGAGAAGGGGAAAAGAAAAAAAAGAGAGGGCATGATGGGGCTGTGGGCAAAGGTGATGGGTGGCCAATGTGGGGGGAGCGGTGATGTTAGGGAAGGGGAAGGAGAAGGAGGTGGGGGTAAGAGAGAGAGTTTATTATTATTTTATTTTAAAGCTGCAACTTCAGCTATTTTATTATATAATATGCCATGTCATTAAAATGGAGTATTTCTTAAACATAGGGACGGAAATGTAAGGTTTTGAAACCTTAAGGACCAAACATACCTATTACTTAGACCTCAGGGGACTAAAAAAGTAATTTTTCTTTATTTTTATTAATTCATTTTTTTACTATTAAAGTAAGCGATAAAAATTGTGGCACTAAAATATATCATCACCTTCTTAATTCATTCTGGATAGTTCTTTCTATTATTGTTTTTTTTATTCATGTTATTGGGATTTGATGTATGGGAATCGTGTTACATGTTAAATGATACTTGTTCCTAGCTGCCTGCTTATTCAAGTGTACTTCAAGTCTTCAACAACTTTTTCGATTCTTGCTCTTTCATTTTAACATATTTTTCTGTCTTTTGACATATGAAACATTATCAGTTATGTAAAAAGCAGAAGTGATAAACAATTACGAAGCAAGGCGGCAGAGGCAGATACAAAAACATGTGCACCAGAATCAACCATTGGGAAAGGGGCTCCAATTGTCCCCTGTGGCCTCATTGCATGGAGTTTGTTCAATGATACATATGGTTTTTCTATGAAGAACAAGGCACTACATGTCAGCAAGAAGGACATAGCCTGGAAAAGTGACCAAGAAAAAAAATTTGGATCTGATGTCTATCCTAAAAACTTCCAGAGTGGGAGTTTGATTGGTGGCGCAAAGCTAAATGCGAGTATACCTGTGAGTATGCTTAATTTGCATTCTACCATCTCATGTTGATGCTGTCTGATTATGTTATTGTTTACCTCCTCTCCTTGATTCTAGTTAACGGATGAATATGCTTTCCTTTTTGTGTGTAATAGCTGAGCCAGCAAGAGGATCTTATCGTGTGGATGCGAACAGCTGCACTACCCACCTTCAGGAAACTATATGGGAAGATAGAAGCAGACTTTGAAGCTAATGATATAATAACAGTGGTGATTGAAAACAACTATAATACTTATAGCTTTGGTGGTAAAAAGAAGCTGGTCCTTTCAACCACTAGTTGGATTGGTGGGAAGAATGATTTTCTAGGCATAGCTTATCTTAGTGTTGGAGGACTCTGCTTGTTTTTAGCAATAACCTTCATACTCCTGTACGTCATCAAGCCAAGGTGAGATTAATTAATATTATAAGTTCTAAACTTAAAGATAACTGGTATAGTTATAAATTTAGGGAAAGATATTCACTTGACTGAAATTTACAGAATATGATAAATGCAACTGCCCCTCTGTTCTTTAGCCGTAAATTTGTATCTTCATGAATCAGTGCTTCCATTTTCCTTATGTTAACCGACAACAACGTTCTAGTTGCAAATATTTCTGTTTCTTTTTCATTTGTATTAACAGTTGTGCACTTGTGCTGGAAGTTTGCATGTCTTTGCACCTTTTGTTGTGTTCAAATATTTGTATCAGTCTATCTTAATCCTATACAAATTCATATTCAACTGAATGAGGACGAGCTCCTGATCGGTTCTTCAAATGTGCAGTTAGTGAACACTAACTTCTTTCAAGGACTGAAACTTGGCATGCCTTTACTCTGGATACAACTCTGTAATATCCTCTAAATTATATCAGAGTTTCCATATAAAATTTATTCATGTTTTTTTTTGTCAACCATCTCTCCTACCCTCTTCATCCTTCTGCCTCTCCGCTTCTCATGTGATCTCTCTTGCATAACTTCTTCAGTATGCTCTCAAAGTTGTTTCTCCTATCCGCCCTGGAAGAAAGGATATATTTTTTTCACAAATTTAGGATTTTGAAGAAGTTTGTATGCTTTTGATTTTGATGGAAAGGAGTGAGTTTCAACCTAATATGAGAGTTTTTCTATTGGAAATTGTTGTGTCATTGTGTTTGTGTTATGGAAGGCGTGTTTATGTCTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGTAAGGAAATTGCAAATGAAAGCAAATATAAGGGCACAAAATAAACCAAGCCCCAAGGAAAAAGGAGTTTGAACCCTGATCATAGAAAAAGGCATAGTGATCGATACCTATGAAGAGGCATTAAACCTAGACACCTCTCAAACCTTTTCATCAGATTTCTCCACCTCTCTAAAGATTTTATTATTCCTCAAAAGTCATGCCCCACGAAATTACAAAGAAACTAGCATGCCACAAAATTCTATTATTCCTCTCTAACCTAGACAACCTCTCAAACCTTTTCATCGGATTTCTCCACCTTTCTAAAGATTCTATTATTCCTTTAAAGTCAAATGCCCCACAAAATTGCAAAGAAACTAGCATGCACAACACCTTTTCCCTCTCTAAAAGGAGAATTCATAAGTACCTCCTCCATCATAGATTTACCATCTCTATTTTGATATTCTGAGCCCCACAAACACCGAACAATCTCATCCATTAACTCCAAAGGTATTGAGCAAACTGGCAATCTTATATCATATGATCATGGTCCTCCTCGTGCAGAGAATGCACCATTGTAGGTCCAAGACATAGGAAGAATATCTTTATTCACGATCCATGATATTAACTATCCCATGTAAAACTTGCCATGCAAAAAACTTAAGTTTCTTTGGAATTTTAACCTTCTAGGAGGAGGAGAAGTAAAGGCTCGAAGTAACAGCCAAGAGAAGGATAGATAAAATATGAAAAAGAAGAATGGCAAAAGATACCCTTAGAAGGATCGAGGGTCCAAATCCTAATAATTCTTCTCCTTGGAATCACATATTGGTCTCAAAGAAGTGAAAGAAGACCCGCCACTTTAGTCGCCTCTGGAAGCCTAAGGAGATCGAAGAATAAGGATATGAGAAAGGCAAAACCAAGGTGCCATGGGATGTAACCTCCTGTTCAGTAGATGTATAACTGTGGAAACAAAACACTCATAGCGTTATCACCCACCCAACAATCCTCCTTCATGTTTGTTGGTTGCATCTCTTGGCTAGAAATTATTTTGGGTACCCAGAGCATAATGGGTTCATGTGGATGCAAAAGCCCATGAACAAAAGAGGAAGCGTTGTAGAAATTCCTTTAAGTGTTGAATGATGGTCTAAAGAGTAATATCATAGTTCCATTGAGGATAGGCTTACGGGGGATGGAAGGATTTCGTTAAGCTTCCTGAGGAATTCTTGTCAAGCCTTCTATTCAAGGAAAGTGTTTATTGTGGAACTAAAAGATTGTCGTTGAACTCTTGCTGATATTATCAAGGATATTTGGCCTTATGGAAAATCCAAGGAAAAGAGGTCTAGCTTTCTTGAAACAATAGCTAACGATAGCTCTAAAAATGGAAAGGAATTTTGTCTGTGCCCCTATCAAAATTTGCCAGTGTCCCTTGAGAGAAGCTGATGGTTATCACGAGGGAAAGCTTGCAGGACTAGAGAACATATTGATTGCAGGATATTGTTTTTCAAGTACATTGATAAGGCCATACTAAATAGGGGAATATATTGTTTTTAATGATCATGATGCAGAAAAGTATAGAGAACACCTGGGACATTAGTGAGGACACCAAAATGTATTAACAACTAATAAAATAAAAGTGTAATCTTGTTAAGTATGAGATATGGGCAATAAGAAAAGGAAACACTAGGGACTAGGGGGCCAGACTTCAGACGATTGTTTGGTTACAAAAAATTCCCCCATCCTAATGGAGGTAAAATAGGGCTTCTTACCCTCCCTTTCTTTAGACTGTTACGGGAAGATAAAAATTTTGATCTTCTTGGCTTTTCAATTGGTAGGAAAGGAACTCTATTAATTTGTCTCGGCCCTTTTTTGTAGATGACATCCTCTTATTTTGGGATGAAAAGGAATAGGAGGTTAAAAATATCTTGGCCTTTTCTCCAAGATCTTTATGATTTCCTCCCGATGTCACGTCAATCAAGTCCAAAATTGACAATGTTACTATGAATGGCTCTAATAATCTAGTTGGTTATGACTCACGACTCGCTAGTAACTATTTCTTTTGTAAATTTGTGAACTAGGGGGCTTCTAGAGGTTTGAGATAGGGGGACCCTTCATCTCCTTTCTTGTTCCTTTTGGTCATAGATGTTTTAAGCTGTAGCATCTACAGGGGGTGGCGACCGGTTCCAAGGAGGTGGTTTTGTCTCATCTTCAGTTTGAGATGATACGATGTTCTTTTGCTCTAGCAAAGAGGACTCTTTCCTAATCCTAAATCATATTTTGGGATTCTTTGAGGCAATATCGAATCTTAAAATTAATAAAAACAAATGTCACATCTTGGGTATAAACTGTGATAAGGAGAAGCTCAATAGATGGATAGGTTTGATTGGTTGTGAAGTTGGATCTTTTTCTTCTTCCTACCTTGGCTTCCCTCTTCGAGAAAATTTGAGAGCTATCCCTTTTTGGAATGCCCCCATTGAGAAGATCAGATTGAGATTAGCCTCATGTAAGAAAGGTTTTTTCTCCAAAGCTGGTAGACTTACTTTGATCAGATCAGTGTTGAGTGGAATTCCTATCTATTATCTTTCTCTTTTCTGTGTGCTAGTTTCAGATTGTAAGAGCATCGAGAAGCTCATGAGAGACTTTATTTGGGAAGGGGTGGAGGAAGGGAAAGGGTCTCATCTGGTTAGCTAGGAAGTTGTGGGGACACCTGTGAACCAAGGGGGTTGGAGCTAAAAAATTTAAGGTTACGCAACAAAGCTCTGTTGGCTAAATGGCTTTGGCGTTTTTCCCTTGAGCCTGAATCCTTGTAGCATAGGATTATTGTGAGTAAGCATAGCCCCCATCCCTCTGAATGGGTGGTGAAAGAGGTTAAAGGCACACATTGAAATCTTTGGAAAGATTTTTCTTTTGAGGTCCCTTCTTTTTCTCATCTTATTTGTTGTGTTGTGGGGGAAGGTAAAGAAATGTATTCATGGGAAGATCAATGGGTGAGGGATAGACCCCTTTCATCTATGCTTTTCTCGGTTATATCATTTGTCTTCCTTTAGAAATTGTCTTGTGTCTAATTTTTTGGTTTGATCAGGGAGCTCTATGTCCTCCTTTGGTTTTTGTTGTCTGTTGTCCAATAGGAAAATGACAAAGGTGACCTCTCCTCTCTCTATGCTTGAGGAGTTTAAGTTTAGGCTTGGGAGACGGGATGTTTGTGTTTAGAGTCCTAATCCTTTAGAAGGCCTTTTTTGTAAGTTCTTTAGGCTTTTATTGGATCCCTCTTCTGCTATTGAGTTGGCCTTTGATGTTTTATGGAGGATTTAGATATCAAAGAAAGTTAAGTTCTTTACTTGGCAAGTTTTGCCCAGTCGTGTGAATACGATGGATAGGCTTTTGAGAAAGATGCTTACATTAATGGGTCCTTTTTGTTGTATCCTTTATCGGAAGACGGAGGAAAACCTGGATCACTTTCTTTGGAGTGTCAGTTTACGAGTTCTTTGTGGAATTGCTTCTTTCAGGAGTTTGATTTTATATTAGCTTGCCAGAGGGGATGTTCATGCAATGATCGAGGAGTTCCTTCTCCATTCGCCTTTCAAAGAAAAATGCCCTTCTTCGTGGTTTGCCGAGGTGTGCGCTTTGTTGTGAGATATTTGGGGGAAGTGGAACAATAACGTGTTTAGAGGTGTGGATCGGGACTCTAGTGAGATTTGGTCCTTGATGAGGTTTCATATTTCTCTTTGGGCTTCGGTCTCGAATACTTTTTGTAATTATTCTCTGGACAACATCTTACTTAGTTAGTAACCCTTTCTCTGATGAGATTTTTTGTTGGTTTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTGTATGCTCTTGTATTCTTTCATTTCTTCTTAATGAAAGTAAGTGTTTCTATAGGAAAAATTGTTTCTCTTGTAAGATTGCCTCATGGTCTTTAGTTCTTTGGAAATGGCTTGGCAAGGGAACAAAAAAAGGCAAAAAGGAAGAAGAAGAAAGATGCATTTTGAAAGTAAAGAATAGGTAGCACAGTTCCATGGTTATAGACAGTAGTAATATTCCCCCTCGAAAGTTGGAGCCAAAAGCTGTCTACAGAGGGGGAATATTGACTTTAGCACAATCAGAGGGGGAATATTGACTTTAGCACAATCAGAGATTATTTAGCCTGCCTAGTTCTGATTTGTATTACTCTCTTGACTATATGTTATTTTTTGGCTGCCTCCCGGTGTAGGCTCAACAGATTGCTTTGTAATCATTCCTGTTTCAGATGTTTGTGCTACTTGGGGCACTTTTTGATAACCTTCTCTGACTAGGGTAGATTTCATTATATTAAGGAAGCTCTATTTTCTTTTGAAGGAAGAGGAAAAGTACCTACCTTCTTATAGTCCATTCTTCCAAACACGTTACTTGCTAGCCACTCGTATCTAGAATTGAAAAGCTAATCAAATTTTTTTAGAAGGGGAAGATCTTGAAGAAGGAAGTCATTTGGTTAGTGGGGATTAAGATGAATGCTTCTTCTCCTTTCCAAAGAACTTGAGAGTTCTTTCTTGAGATCATCCTTAGTGTTGCATAGTGTTATTTCTAGTTTGGCATAGATAAATTTGGCTGGTTCTCCAATTGCTGGACTGAGTGCATTTGGGATGGCTCTTGAAAATGGTATTTTCTAAGTGAAATCACTTTTCTCACTTTTAGAAGAATTACCTAATGATCTCTCGTGGAATGTTCTTTAGATTTTGGAAATCGCTTTTGATTTTCTAACCAGATACCATTAAAATTTTGAAAGTGCTTATAATGAGCTAAAATCTCTTTTCACTTCCAAAACAAGAATCTTTCCAAGTTCATCTTAATGACCTTGGAAAGATAGTCATCGGTGGTGTGATTCAGGTTGCTTTCATGAAGACTGGGATTGAATCATTGGTGGTGCCATTCAACTCTTTTTGATTTCTCGAGCCTTAGTGTGGACAATATTGAAGCCAATTAGTAGGATGGAGTGTTGACATTTATAAGATAAAGCTAGATTATGGGTGTGAATTGCGACGTTGAAAAGATGGAAAGATGGGCTGGTTTTGTGGGGTGTAGCATCGGCTCCTTTCCCTCTTATTTAGGTCTTCCTCTTGGATAACCCTAGAGTGGTTTCTTTTTGGAATCTGGTAGTGGATAAGGTTAGGAAAAGATTTCCTTGGTGGAAGAGAAGCTTCTTCTCCAAAGGCAATAGACTCACCCTTATTAGGTTGGGTCTGTGCTGAGTGGTATTCTCGTATACTATTTCACCCTCTTTTGTGCTCCCTGTTCGGGTTGTAAAAGTATAGAAAAGCGTATGAGGGATTTCCTAAAGAGGTAGATGAAGGTAAAGGAGCCCCTTGTGAGGTGGGAGATGACTGGAAAATCTGTGAAATCGACAAGGCTTGAGCTAGGGAATTTAAGAACTCATAGCAAAGCCCTCTTGGTGAAATTGCTTTGGCGTTTCCCCTCGATTGTAGCAAGCTATGGCGAAGGATCATTGTAAGTATGAGACTCACCCCTTTGAGTGGCTGTTGGGCGAGTTTAAAGGCGCACACACAGAAATTTGTGGAAGGATATTTATTCTGAGGTCCCTTCTTTTTCTCCTCTTGTCCATCGCATTTTAGGGGAGGGAAAGGAAACATATTTATGGGAGTATCAGTGGGTGGGGGTTATACCCTTCTACACTCGTTTCCTCGTCTTTACTGCCTTTGCTCCTTAAAAAACCGTTGCGTGGATAATATCTTAGATTGGTCTGAGAGCTCCATTTCTTTTTTGTTCAGGTTTTGTCATCCTTTGATCTATAGGAAATAACATATATTATGCCTCTCTTGTCTTTGATTGGAGATGCTGATTTTAGGGACAGGAAGCTGTTGGAATTCTTCACCTGTAAACAAAAAATTACCAACAACCTCCCAAGAAACAGAGTATTTCTCTGCTGTATTTTATTTATCAACCTCTTAGGAAAGTTTACAAGCAGCACCAACAAGATAACACCAGAAATAAAAAGAAACAGCCACAGACCCACCAAAAAACCATCCTCTCCCTCAAGGCAATTGCCTACCAAAAACCTGCCCCCTTCTATCCCCCCAAAACCTCTCTTAAACCTCTCCTCCATGGTCCCCCTCTCCCACTTCCTTTTCAGCCGAATTCCCTTGGTCCCCACCAATTTCTCCTTCTTCTAACGGATTTCCACTTTCCACCCTTTTCTTTGTTTTGTCATTTTCTCTTTTACCCTTTCGTTTATAAGTATGTAAGATTGGAGGTCTTACAGAAGCCTCCTATCTTTCGAGCTTCTCATGCAGCTCCTTTTGTTGTTTATTGAGCCCTCCTCCCATTATAGACTGTTTTTTCGGCCTACCTGGAAGATCGACATTCCCAAAAAGGTTAAGTCAAGTTCTTTGTTTGCCAGGTTATTTATAATCATGCGAACACTCTGGATTGGCTCTCGAGAAAGTGGCCTTCGTTGATTGGTCTGTTTTGTTGTATCCTTTATCAAAAGGTAGAGAAAAACCTGGATCATCTCCTTTGGAGTTGTGACTTCACATGCTTCATGTGGTGTTATTTTTTTGAGATGTTTAGCTTTCAGCTGGCCCATCAAGGAAGACCTAATCGATTTGATTGAGGAGTTCCTTCTCCATTCACCTTTTAAGGAGTGACTTGTTGGGGTGTATGCTCTTTGGAGGGAGAGGAATAATAAAGTTTTAAGAGGATTGGAAAAGGACCTGAGTAATATGTGGTCCCTTACTTGCTGGGTTCGATTACAAAGTTCTTTTTTCTTTTTTTCTTCTTCTTCTTCTTCTTCTTCATCTTTTTTATTTTTTTATTTTTTATTTTATTTATTATTATTATTTGACAGGTATCATTTTAAAGGTTAGAGGCTCTTTCTTAAAGACTCTCCCTTTTTGTGGGTTAGTTTTTTTTGTGACCCGTGTATTCTTTCATTTTATTGTCAATAAAAGGTTTATTATTCCTAAAAGAGAGATTTCTAAGTATAGAGTTTTGACAACCCCGACTTTTATTCTCTAATATACGAATTGTCCAGGCCTATACGGACTGGAAAATATCCCAGTAAAATTCTTGCTTTTGCTGTGGTTTTCATGATCTAGTTGGTGCCATATGGTATCAACGATAAAGTAGGTGGTCGATATCTTTGAAACTCTTTGACCTCTGTTGGTGTGGACCTCGGAGTTATATCAAGTTCCTAAACAAATGGCTCTGTGGTAATCTAGGAAGGCCTTTAGAGACAACTGCTATTGGTGGTCTTTCTCAAATATGGAGAGAAATACTAGGATCTTCGAAGGGGGTGGATAATAATTTCTTCCCTTGATAAGATTTTGTTATTTTCTCTGTTTCTAGCTGATCTGCCCTTGGAGAAGACCCATTATAATTACTACCTCATTTATTATTTGTTTGAGGCTAAGATTTCATATCCCTCTGTCAAATACAAGTTATGTTCCTGTAAAGGAAATCGAAGGCGATTTAGATAGCGATACATGTTTATGTTTAACCATTCGATTTAGCTTGAAATGGTCGATAATATTTCATCAGTTAAACTTGGAGTTCTCCAACATTGAATAACTTGATTAATGTTCTATCCTTTTACTGCATTATTTTGCAGGCCTCTTGGTGATCCATCCTATTTGTCCTGGAACAGAAATGCAGCAGGGCAGGCAAATTAACCATCTCTTCTGCACCAAATTCTCTTCTAAATGGCATGCTTTGCTGCGGTTCTTAATCAACGCTTTAAGTCATAGAATGATGGAGGAGATCTAAATGAATTGTAAGCTACTGGTAAAAGCCTACTTTATTTTTCTGGTAGCTTGGACTTTGGTTTAATATGTATATTTTTGGACCATGTCTTGTTTACAAATTTCCCAGATGAAATGATTCTATGTAAGCTTCAATGTGAAGTTTATAATCCCTTATTTTGTTAAAAAGGCTGGGAGTTGAGGGTATT

mRNA sequence

AATTTTTCTAAAACTTGTTTAGAATAGAAGAGAATTGAGAAAAAAACAAGCGGCATAATAAAAAAAAATGTTTTGAAATAAAATACAAAAAGGAAAAATATGAAAACCGCGCGAAACTACTTCCACTAAATCTCGATAATGGGCGATATGTGTTGGTAGCCTTACCGAAACAAGGAAGTGGGTTCGTGAAGCAAGGGCCACCGATCGGATGAGATTCATCGATCAGAAATGAATAATACTCACGGGGCAACGAGCTCGGCGGGTAGAATGCAGCAAGGAAATTCTGATTCGTCCACTCCACCCAAGAAATCGAAGAAACCCAAATATTCTAGATTTACACAGCAAGAGCTTCCTGCTTGCAAACCAATTCTAACACCAGGATGGGTTATAACATCCTTCGTTGCTGTTGGCATTATCTTTATCCCCATAGGGATTGCTTCCTTATTTGCATCAGAACAAGTTGTTGAAATTGTGGATCAATACGACCATGATTGCCTTCCTTCTGAGTTTCAAGGCGACCCTCTTACGTTTATTAAGGACAGCAAAACTAATAAAACTTGTAGCAGGAAGTTGACTGTTCCTAAACCAATGAAAGGTCCGGTTTACATCTATTATCAGCTTGATAACTTCTATCAAAATCACCGACGTTATGTAAAAAGCAGAAGTGATAAACAATTACGAAGCAAGGCGGCAGAGGCAGATACAAAAACATGTGCACCAGAATCAACCATTGGGAAAGGGGCTCCAATTGTCCCCTGTGGCCTCATTGCATGGAGTTTGTTCAATGATACATATGGTTTTTCTATGAAGAACAAGGCACTACATGTCAGCAAGAAGGACATAGCCTGGAAAAGTGACCAAGAAAAAAAATTTGGATCTGATGTCTATCCTAAAAACTTCCAGAGTGGGAGTTTGATTGGTGGCGCAAAGCTAAATGCGAGTATACCTCTGAGCCAGCAAGAGGATCTTATCGTGTGGATGCGAACAGCTGCACTACCCACCTTCAGGAAACTATATGGGAAGATAGAAGCAGACTTTGAAGCTAATGATATAATAACAGTGGTGATTGAAAACAACTATAATACTTATAGCTTTGGTGGTAAAAAGAAGCTGGTCCTTTCAACCACTAGTTGGATTGGTGGGAAGAATGATTTTCTAGGCATAGCTTATCTTAGTGTTGGAGGACTCTGCTTGTTTTTAGCAATAACCTTCATACTCCTGTACGTCATCAAGCCAAGGCCTCTTGGTGATCCATCCTATTTGTCCTGGAACAGAAATGCAGCAGGGCAGGCAAATTAACCATCTCTTCTGCACCAAATTCTCTTCTAAATGGCATGCTTTGCTGCGGTTCTTAATCAACGCTTTAAGTCATAGAATGATGGAGGAGATCTAAATGAATTGTAAGCTACTGGTAAAAGCCTACTTTATTTTTCTGGTAGCTTGGACTTTGGTTTAATATGTATATTTTTGGACCATGTCTTGTTTACAAATTTCCCAGATGAAATGATTCTATGTAAGCTTCAATGTGAAGTTTATAATCCCTTATTTTGTTAAAAAGGCTGGGAGTTGAGGGTATT

Coding sequence (CDS)

ATGAATAATACTCACGGGGCAACGAGCTCGGCGGGTAGAATGCAGCAAGGAAATTCTGATTCGTCCACTCCACCCAAGAAATCGAAGAAACCCAAATATTCTAGATTTACACAGCAAGAGCTTCCTGCTTGCAAACCAATTCTAACACCAGGATGGGTTATAACATCCTTCGTTGCTGTTGGCATTATCTTTATCCCCATAGGGATTGCTTCCTTATTTGCATCAGAACAAGTTGTTGAAATTGTGGATCAATACGACCATGATTGCCTTCCTTCTGAGTTTCAAGGCGACCCTCTTACGTTTATTAAGGACAGCAAAACTAATAAAACTTGTAGCAGGAAGTTGACTGTTCCTAAACCAATGAAAGGTCCGGTTTACATCTATTATCAGCTTGATAACTTCTATCAAAATCACCGACGTTATGTAAAAAGCAGAAGTGATAAACAATTACGAAGCAAGGCGGCAGAGGCAGATACAAAAACATGTGCACCAGAATCAACCATTGGGAAAGGGGCTCCAATTGTCCCCTGTGGCCTCATTGCATGGAGTTTGTTCAATGATACATATGGTTTTTCTATGAAGAACAAGGCACTACATGTCAGCAAGAAGGACATAGCCTGGAAAAGTGACCAAGAAAAAAAATTTGGATCTGATGTCTATCCTAAAAACTTCCAGAGTGGGAGTTTGATTGGTGGCGCAAAGCTAAATGCGAGTATACCTCTGAGCCAGCAAGAGGATCTTATCGTGTGGATGCGAACAGCTGCACTACCCACCTTCAGGAAACTATATGGGAAGATAGAAGCAGACTTTGAAGCTAATGATATAATAACAGTGGTGATTGAAAACAACTATAATACTTATAGCTTTGGTGGTAAAAAGAAGCTGGTCCTTTCAACCACTAGTTGGATTGGTGGGAAGAATGATTTTCTAGGCATAGCTTATCTTAGTGTTGGAGGACTCTGCTTGTTTTTAGCAATAACCTTCATACTCCTGTACGTCATCAAGCCAAGGCCTCTTGGTGATCCATCCTATTTGTCCTGGAACAGAAATGCAGCAGGGCAGGCAAATTAA

Protein sequence

MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN

Homology

[Close]

BLAST of Lsi05G002620 vs. Swiss-Prot
Match: ALIS5_ARATH (ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 1.3e-132
Identity = 231/353 (65.44%), Postives = 284/353 (80.45%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           M++T  +++  G    G+S+ S   K SK+PKYSRFTQQELPACKPILTP WVI +F+  
Sbjct: 1   MSSTAASSTVGGG---GSSEISGVKKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVA 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           G++FIP+G+  LFAS+ VVEIVD+YD DC+P+  + + + +I+  + +K C R +TV K 
Sbjct: 61  GVVFIPLGVICLFASQGVVEIVDRYDTDCIPTSSRNNMVAYIQ-GEGDKICKRTITVTKA 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MK PVY+YYQL+NFYQNHRRYVKSR+D QLRS   E D KTCAPE  +G G PIVPCGL+
Sbjct: 121 MKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNVG-GEPIVPCGLV 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTY FS  ++ L V+KK I+WKSD+E KFG +V+PKNFQ G+ IGG  LN S P
Sbjct: 181 AWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LS+QEDLIVWMRTAALPTFRKLYGKIE D  A D ITV+++NNYNTYSF G+KKLVLSTT
Sbjct: 241 LSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAG 354
           SW+GG+NDFLGIAYL+VG +CLFLA+TF +LY++KPR LGDPSYLSWNR+A G
Sbjct: 301 SWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 348

[Close]

BLAST of Lsi05G002620 vs. Swiss-Prot
Match: ALIS3_ARATH (ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1)

HSP 1 Score: 468.8 bits (1205), Expect = 5.4e-131
Identity = 230/352 (65.34%), Postives = 279/352 (79.26%), Query Frame = 1


Query: 3   NTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGI 62
           +++ A+SSAG    G+ DSS   K SK+PKYS+FTQQELPACKPILTPGWVI++F+ V +
Sbjct: 2   SSNTASSSAGAA--GSGDSSAARKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSV 61

Query: 63  IFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMK 122
           IFIP+G+ SLFAS+ VVEIVD+YD +C+P+  + + + +I+    +K C+R L V K MK
Sbjct: 62  IFIPLGVISLFASQDVVEIVDRYDTECIPAPARTNKVAYIQGDG-DKVCNRDLKVTKRMK 121

Query: 123 GPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAW 182
            P+Y+YYQL+NFYQNHRRYVKSRSD QLRS   E     C PE  +G G PIVPCGLIAW
Sbjct: 122 QPIYVYYQLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDVG-GQPIVPCGLIAW 181

Query: 183 SLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLS 242
           SLFNDTY  S  N +L V+KK IAWKSD+E KFG+ V+PKNFQ G++ GGA L+  IPLS
Sbjct: 182 SLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLS 241

Query: 243 QQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSW 302
           +QEDLIVWMRTAALPTFRKLYGKIE+D E  D I V + NNYNTYSF GKKKLVLSTTSW
Sbjct: 242 EQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSW 301

Query: 303 IGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQ 355
           +GGKNDFLGIAYL+VGG+C  LA+ F ++Y++KPR LGDPSYLSWNRN  G+
Sbjct: 302 LGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349

[Close]

BLAST of Lsi05G002620 vs. Swiss-Prot
Match: ALIS4_ARATH (Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2)

HSP 1 Score: 461.8 bits (1187), Expect = 6.6e-129
Identity = 217/320 (67.81%), Postives = 266/320 (83.12%), Query Frame = 1


Query: 34  SRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIVDQYDHDCLPSE 93
           SRFTQQELPACKPILTP WVI +F+  G++FIP+G+  LFAS+ V+EIVD+YD DC+P  
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 94  FQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSK 153
            + + + +I+  + +K C+R +TV K MK PVY+YYQL+N+YQNHRRYVKSR D QLRS 
Sbjct: 77  SRDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSP 136

Query: 154 AAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEK 213
             E +TK+CAPE T+G G PIVPCGL+AWSLFNDTY F+  N+ L V+KKDI+WKSD+E 
Sbjct: 137 KDEHETKSCAPEDTLG-GQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRES 196

Query: 214 KFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEAN 273
           KFG +V+PKNFQ GSLIGG  L+  IPLS+QEDLIVWMRTAALPTFRKLYGKI+ D +A 
Sbjct: 197 KFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAG 256

Query: 274 DIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYV 333
           D I V+++NNYNTYSF GKKKLVLSTTSW+GG+NDFLGIAYL+VG +CLFLA++F +LY+
Sbjct: 257 DTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYL 316

Query: 334 IKPRPLGDPSYLSWNRNAAG 354
            KPR LGDPSYLSWNR+A G
Sbjct: 317 AKPRQLGDPSYLSWNRSAGG 334

[Close]

BLAST of Lsi05G002620 vs. Swiss-Prot
Match: ALIS1_ARATH (ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.9e-128
Identity = 224/347 (64.55%), Postives = 272/347 (78.39%), Query Frame = 1


Query: 8   TSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPI 67
           T S+     G+ DSS   + SK+PKYS+FTQQELPACKPILTPGWVI++F+ + +IFIP+
Sbjct: 6   TPSSSAAAAGSIDSSAARRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPL 65

Query: 68  GIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYI 127
           G+ SLFAS+ VVEIVD+YD  C+P   + + + +I+ +  NK+C+R L VPK MK P+Y+
Sbjct: 66  GVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYV 125

Query: 128 YYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFND 187
           YYQL+NFYQNHRRYVKSRSD QLRS   E     C PE   G G PIVPCGLIAWSLFND
Sbjct: 126 YYQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDFG-GQPIVPCGLIAWSLFND 185

Query: 188 TYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDL 247
           TY  S  N+ L V+KK IAWKSD+E KFG +V+PKNFQ G+L GGA L+ + PLS QEDL
Sbjct: 186 TYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDL 245

Query: 248 IVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKN 307
           IVWMRTAALPTFRKLYGKIE+D E  + I V ++NNYNTYSF GKKKLVLSTTSW+GGKN
Sbjct: 246 IVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKN 305

Query: 308 DFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQ 355
           DFLGIAYL+VGG+C  LA+ F ++Y++KPR LGDP+YLSWNR   G+
Sbjct: 306 DFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350

[Close]

BLAST of Lsi05G002620 vs. Swiss-Prot
Match: ALIS2_ARATH (Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.3e-104
Identity = 189/340 (55.59%), Postives = 246/340 (72.35%), Query Frame = 1


Query: 12  GRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIAS 71
           G M +    SS    +  K  Y +F QQ+LPACKP+LTP  VIT F+ +G +FIPIG+ +
Sbjct: 6   GSMNRAPDQSSFLRSRRSKALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLIT 65

Query: 72  LFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQL 131
           L AS   +EI+D+YD +C+P E++ + L +I DS   K C+R L V K MK P++IYYQL
Sbjct: 66  LRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQL 125

Query: 132 DNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGF 191
           DN+YQNHRRYVKSRSD+QL      + T +C PE +   G PIVPCGLIAWS+FNDT+ F
Sbjct: 126 DNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEES-SNGLPIVPCGLIAWSMFNDTFTF 185

Query: 192 SMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWM 251
           S +   L+VS+ +IAWKSD+E KFG +VYP NFQ+G+LIGGAKL+  IPLS QED IVWM
Sbjct: 186 SRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWM 245

Query: 252 RTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLG 311
           R AAL +FRKLYG+IE D E   ++ V + NNYNTYSF G+KKL+LST++W+GG+NDFLG
Sbjct: 246 RAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLG 305

Query: 312 IAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNA 352
           I YL VG   + ++I F+LL++  PRP GD    SWN+ +
Sbjct: 306 ITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNKKS 340

[Close]

BLAST of Lsi05G002620 vs. TrEMBL
Match: A0A0A0L926_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194410 PE=4 SV=1)

HSP 1 Score: 612.1 bits (1577), Expect = 4.4e-172
Identity = 311/340 (91.47%), Postives = 317/340 (93.24%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           MNNTHGATSSAG+MQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV
Sbjct: 1   MNNTHGATSSAGKMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           GIIFIPIGIASLFASEQ                F+G+PLTFIKDSKTNKTCSRKLTVPKP
Sbjct: 61  GIIFIPIGIASLFASEQ----------------FRGNPLTFIKDSKTNKTCSRKLTVPKP 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MKGPVY+YYQLDNFYQNHRRYVKSRSDKQLRSKA EA TKTCAPE+TIGKGAPIVPCGLI
Sbjct: 121 MKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLI 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTYGFSMKNKAL VSKKDIAWKSDQE+KFGSDVYPKNFQSG LIGGAKLNASIP
Sbjct: 181 AWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT
Sbjct: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLG 341
           SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKP   G
Sbjct: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPSCAG 324

[Close]

BLAST of Lsi05G002620 vs. TrEMBL
Match: A0A061GGB3_THECC (ALA-interacting subunit 1 OS=Theobroma cacao GN=TCM_027482 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.0e-149
Identity = 267/354 (75.42%), Postives = 302/354 (85.31%), Query Frame = 1


Query: 4   THGATSSAGRMQQGNSDSSTPPKK-SKKPKYSRFTQQELPACKPILTPGWVITSFVAVGI 63
           T  A +  G +    SDSS+  K+ SKKPKYSRFTQQELPACKPILTPG VIT+F  +GI
Sbjct: 10  TSSAAAGGGGVSTSTSDSSSAAKRNSKKPKYSRFTQQELPACKPILTPGLVITTFTIIGI 69

Query: 64  IFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMK 123
           IFIPIG+ SL ASE VVEIVD+YD  C+P  +  + L +I+ S TNK+C+R L VPK MK
Sbjct: 70  IFIPIGLVSLSASEHVVEIVDRYDEGCVPPNYSKNKLAYIQSSLTNKSCTRTLNVPKLMK 129

Query: 124 GPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAW 183
            PV+IYYQLDNFYQNHRRYVKSRSDKQLRSKA E DTK+C PE  +  G PIVPCGLIAW
Sbjct: 130 SPVFIYYQLDNFYQNHRRYVKSRSDKQLRSKAYERDTKSCDPEGFVLDG-PIVPCGLIAW 189

Query: 184 SLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLS 243
           SLFNDTYGFS+K+K L V+KK+IAW SD+E KFGSDVYPKNFQSG LIGGAKLN+SIPLS
Sbjct: 190 SLFNDTYGFSVKSKMLEVNKKNIAWDSDKEHKFGSDVYPKNFQSGGLIGGAKLNSSIPLS 249

Query: 244 QQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSW 303
           +QEDLIVWMRTAALPTFRKLYG+IE D +AN+ ITVVI+NNYNTYSFGGKKKLVLSTTSW
Sbjct: 250 EQEDLIVWMRTAALPTFRKLYGRIEEDLQANEQITVVIQNNYNTYSFGGKKKLVLSTTSW 309

Query: 304 IGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 357
           IGGKNDFLGIAY++VGGLCLFLA++FILLYVIKPRPLGDPSYLSWNR+ +G  N
Sbjct: 310 IGGKNDFLGIAYITVGGLCLFLAVSFILLYVIKPRPLGDPSYLSWNRSPSGHPN 362

[Close]

BLAST of Lsi05G002620 vs. TrEMBL
Match: B9MWW5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02040g PE=4 SV=1)

HSP 1 Score: 532.3 bits (1370), Expect = 4.4e-148
Identity = 256/350 (73.14%), Postives = 299/350 (85.43%), Query Frame = 1


Query: 7   ATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIP 66
           ATSS+G  +  +S ++   KK+KKP YSRFTQQELPACKPILTPGWVITSF+ VG++FIP
Sbjct: 5   ATSSSGGGKD-DSPAAVSAKKNKKPNYSRFTQQELPACKPILTPGWVITSFIVVGVVFIP 64

Query: 67  IGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVY 126
           IG+ASL+ASE VVEIV++YD DC+P +++ + L +I+ S+ NKTC+  + VPK MK PV+
Sbjct: 65  IGLASLYASEHVVEIVERYDKDCIPPDYRNNSLHYIQTSEINKTCTMTINVPKHMKSPVF 124

Query: 127 IYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFN 186
           IYY+LDNFYQNHRRYVKSRSDKQLRSKA+E  T+TC PE+    G PIVPCGL+AWSLFN
Sbjct: 125 IYYELDNFYQNHRRYVKSRSDKQLRSKASEGVTETCKPEAVTSNGQPIVPCGLVAWSLFN 184

Query: 187 DTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQED 246
           DTY FS+K + L VSKK+IAWKSDQE KFGSDVYPKNFQSGSLIGG KL++SIPLS+Q D
Sbjct: 185 DTYRFSVKKEVLDVSKKNIAWKSDQEHKFGSDVYPKNFQSGSLIGGGKLDSSIPLSEQVD 244

Query: 247 LIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGK 306
           LIVWMRTAALP FRKLYGKIE D +AN  ITV IENNYNTYSFGGKKKLVLSTTSWIGGK
Sbjct: 245 LIVWMRTAALPNFRKLYGKIEKDLQANTTITVTIENNYNTYSFGGKKKLVLSTTSWIGGK 304

Query: 307 NDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 357
           N FLG AY+++GGLCLFLA+ F+ +YV KPRPLGDPSYLSWNRN +GQ N
Sbjct: 305 NSFLGRAYIAIGGLCLFLAVCFVFVYVFKPRPLGDPSYLSWNRNPSGQMN 353

[Close]

BLAST of Lsi05G002620 vs. TrEMBL
Match: W9RPY7_9ROSA (ALA-interacting subunit 3 OS=Morus notabilis GN=L484_007781 PE=4 SV=1)

HSP 1 Score: 527.7 bits (1358), Expect = 1.1e-146
Identity = 264/353 (74.79%), Postives = 305/353 (86.40%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKK-SKKPKYSRFTQQELPACKPILTPGWVITSFVA 60
           M N +GA+SS G    G S SS+  KK SKKPKYSRF+QQELPACKPILTPG VI++FV 
Sbjct: 1   MMNPNGASSSDG---DGASHSSSALKKNSKKPKYSRFSQQELPACKPILTPGLVISTFVV 60

Query: 61  VGIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPK 120
           V  +FIPIG+ SLFASE+VVEI ++YD DC+PS +  + + +I+ ++TNKTC +K TVPK
Sbjct: 61  VSFLFIPIGLVSLFASERVVEIKERYDEDCIPSNYTKNVVGYIQSNETNKTCVKKFTVPK 120

Query: 121 PMKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGL 180
            MK PV+IYYQLDNFYQNHRRYVKSRSDKQL+SKA E +T+TC PE +  K +PIVPCGL
Sbjct: 121 KMKSPVFIYYQLDNFYQNHRRYVKSRSDKQLQSKAFEDETETCKPEDSADK-SPIVPCGL 180

Query: 181 IAWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASI 240
           IAWSLFNDTY FS+KN AL+VSK+DIAWKSD++ KFGSDVYPKNFQS  LIGGAKL  SI
Sbjct: 181 IAWSLFNDTYRFSVKNAALNVSKRDIAWKSDRQHKFGSDVYPKNFQSTGLIGGAKLTTSI 240

Query: 241 PLSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLST 300
           PLSQQEDLIVWMRTAALPTFRKLYGKIE D EA+D +TVVIENNYNTYSFGG+K+LVLST
Sbjct: 241 PLSQQEDLIVWMRTAALPTFRKLYGKIEVDLEADDEVTVVIENNYNTYSFGGRKRLVLST 300

Query: 301 TSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAA 353
           T+WIGGKNDFLGIAY+S+GG+CLF AI+FILLYVIKPRPLGDPSYLSWN+N A
Sbjct: 301 TTWIGGKNDFLGIAYISIGGICLFFAISFILLYVIKPRPLGDPSYLSWNKNTA 349

[Close]

BLAST of Lsi05G002620 vs. TrEMBL
Match: V4S853_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012117mg PE=4 SV=1)

HSP 1 Score: 516.5 bits (1329), Expect = 2.5e-143
Identity = 252/342 (73.68%), Postives = 293/342 (85.67%), Query Frame = 1


Query: 12  GRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIAS 71
           GR     S SS+   K+KKP+YS+FTQQEL ACKPILTPG+VI  F+ VG+IFIP+GI S
Sbjct: 3   GRRSSSESSSSS---KTKKPQYSKFTQQELSACKPILTPGYVIGIFIIVGVIFIPVGIIS 62

Query: 72  LFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQL 131
           LFASE VVEIVD+YD  C+P  +  D L +I++S TNKTC+R L   K MK PVYIYYQL
Sbjct: 63  LFASENVVEIVDRYDEGCIPPNYSDDMLAYIQNSDTNKTCTRSLKATKLMKSPVYIYYQL 122

Query: 132 DNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGF 191
           DNFYQNHRRYVKSR+DKQL SK  E DTK CAPE+T   G  IVPCGLIAWSLFND+YGF
Sbjct: 123 DNFYQNHRRYVKSRNDKQLWSKKHEDDTKNCAPEAT-SNGLSIVPCGLIAWSLFNDSYGF 182

Query: 192 SMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWM 251
           S+KNK + VSKK+IAW+SD++ KFGSDVYPKNFQ+G LIGG KLN+SIPLS+QEDLIVWM
Sbjct: 183 SIKNKMVKVSKKNIAWESDKKHKFGSDVYPKNFQNGVLIGGGKLNSSIPLSKQEDLIVWM 242

Query: 252 RTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLG 311
           RTAALPTFRKLYG+IE+D +AND +TV+IENNYNTYSFGGKKKLVLSTT+WIGGKNDFLG
Sbjct: 243 RTAALPTFRKLYGRIESDIQANDSVTVIIENNYNTYSFGGKKKLVLSTTTWIGGKNDFLG 302

Query: 312 IAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAG 354
           IAY++VGGLCLFLAI+FIL+YV+ PRPLGDP++LSWNR+ AG
Sbjct: 303 IAYITVGGLCLFLAISFILVYVVMPRPLGDPAFLSWNRHPAG 340

[Close]

BLAST of Lsi05G002620 vs. TAIR10
Match: AT1G79450.1 (AT1G79450.1 ALA-interacting subunit 5)

HSP 1 Score: 474.2 bits (1219), Expect = 7.2e-134
Identity = 231/353 (65.44%), Postives = 284/353 (80.45%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           M++T  +++  G    G+S+ S   K SK+PKYSRFTQQELPACKPILTP WVI +F+  
Sbjct: 1   MSSTAASSTVGGG---GSSEISGVKKTSKRPKYSRFTQQELPACKPILTPRWVILTFLVA 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           G++FIP+G+  LFAS+ VVEIVD+YD DC+P+  + + + +I+  + +K C R +TV K 
Sbjct: 61  GVVFIPLGVICLFASQGVVEIVDRYDTDCIPTSSRNNMVAYIQ-GEGDKICKRTITVTKA 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MK PVY+YYQL+NFYQNHRRYVKSR+D QLRS   E D KTCAPE  +G G PIVPCGL+
Sbjct: 121 MKHPVYVYYQLENFYQNHRRYVKSRNDAQLRSPKEEHDVKTCAPEDNVG-GEPIVPCGLV 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTY FS  ++ L V+KK I+WKSD+E KFG +V+PKNFQ G+ IGG  LN S P
Sbjct: 181 AWSLFNDTYSFSRNSQQLLVNKKGISWKSDRENKFGKNVFPKNFQKGAPIGGGTLNISKP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LS+QEDLIVWMRTAALPTFRKLYGKIE D  A D ITV+++NNYNTYSF G+KKLVLSTT
Sbjct: 241 LSEQEDLIVWMRTAALPTFRKLYGKIETDLHAGDTITVLLQNNYNTYSFNGQKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAG 354
           SW+GG+NDFLGIAYL+VG +CLFLA+TF +LY++KPR LGDPSYLSWNR+A G
Sbjct: 301 SWLGGRNDFLGIAYLTVGSICLFLAVTFAVLYLVKPRQLGDPSYLSWNRSAGG 348

[Close]

BLAST of Lsi05G002620 vs. TAIR10
Match: AT1G54320.1 (AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein)

HSP 1 Score: 468.8 bits (1205), Expect = 3.0e-132
Identity = 230/352 (65.34%), Postives = 279/352 (79.26%), Query Frame = 1


Query: 3   NTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGI 62
           +++ A+SSAG    G+ DSS   K SK+PKYS+FTQQELPACKPILTPGWVI++F+ V +
Sbjct: 2   SSNTASSSAGAA--GSGDSSAARKNSKRPKYSKFTQQELPACKPILTPGWVISTFLIVSV 61

Query: 63  IFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMK 122
           IFIP+G+ SLFAS+ VVEIVD+YD +C+P+  + + + +I+    +K C+R L V K MK
Sbjct: 62  IFIPLGVISLFASQDVVEIVDRYDTECIPAPARTNKVAYIQGDG-DKVCNRDLKVTKRMK 121

Query: 123 GPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAW 182
            P+Y+YYQL+NFYQNHRRYVKSRSD QLRS   E     C PE  +G G PIVPCGLIAW
Sbjct: 122 QPIYVYYQLENFYQNHRRYVKSRSDSQLRSTKYENQISACKPEDDVG-GQPIVPCGLIAW 181

Query: 183 SLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLS 242
           SLFNDTY  S  N +L V+KK IAWKSD+E KFG+ V+PKNFQ G++ GGA L+  IPLS
Sbjct: 182 SLFNDTYALSRNNVSLAVNKKGIAWKSDKEHKFGNKVFPKNFQKGNITGGATLDPRIPLS 241

Query: 243 QQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSW 302
           +QEDLIVWMRTAALPTFRKLYGKIE+D E  D I V + NNYNTYSF GKKKLVLSTTSW
Sbjct: 242 EQEDLIVWMRTAALPTFRKLYGKIESDLEMGDTIHVKLNNNYNTYSFNGKKKLVLSTTSW 301

Query: 303 IGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQ 355
           +GGKNDFLGIAYL+VGG+C  LA+ F ++Y++KPR LGDPSYLSWNRN  G+
Sbjct: 302 LGGKNDFLGIAYLTVGGICFILALAFTIMYLVKPRRLGDPSYLSWNRNPGGR 349

[Close]

BLAST of Lsi05G002620 vs. TAIR10
Match: AT1G16360.1 (AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein)

HSP 1 Score: 461.8 bits (1187), Expect = 3.7e-130
Identity = 217/320 (67.81%), Postives = 266/320 (83.12%), Query Frame = 1


Query: 34  SRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIASLFASEQVVEIVDQYDHDCLPSE 93
           SRFTQQELPACKPILTP WVI +F+  G++FIP+G+  LFAS+ V+EIVD+YD DC+P  
Sbjct: 17  SRFTQQELPACKPILTPKWVILTFLVSGVVFIPLGVICLFASQGVIEIVDRYDTDCIPLS 76

Query: 94  FQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSK 153
            + + + +I+  + +K C+R +TV K MK PVY+YYQL+N+YQNHRRYVKSR D QLRS 
Sbjct: 77  SRDNKVRYIQGLE-DKRCNRTITVTKTMKNPVYVYYQLENYYQNHRRYVKSRQDGQLRSP 136

Query: 154 AAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEK 213
             E +TK+CAPE T+G G PIVPCGL+AWSLFNDTY F+  N+ L V+KKDI+WKSD+E 
Sbjct: 137 KDEHETKSCAPEDTLG-GQPIVPCGLVAWSLFNDTYDFTRNNQKLPVNKKDISWKSDRES 196

Query: 214 KFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWMRTAALPTFRKLYGKIEADFEAN 273
           KFG +V+PKNFQ GSLIGG  L+  IPLS+QEDLIVWMRTAALPTFRKLYGKI+ D +A 
Sbjct: 197 KFGKNVFPKNFQKGSLIGGKSLDQDIPLSEQEDLIVWMRTAALPTFRKLYGKIDTDLQAG 256

Query: 274 DIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLGIAYLSVGGLCLFLAITFILLYV 333
           D I V+++NNYNTYSF GKKKLVLSTTSW+GG+NDFLGIAYL+VG +CLFLA++F +LY+
Sbjct: 257 DTIKVLLQNNYNTYSFNGKKKLVLSTTSWLGGRNDFLGIAYLTVGSICLFLAVSFSVLYL 316

Query: 334 IKPRPLGDPSYLSWNRNAAG 354
            KPR LGDPSYLSWNR+A G
Sbjct: 317 AKPRQLGDPSYLSWNRSAGG 334

[Close]

BLAST of Lsi05G002620 vs. TAIR10
Match: AT3G12740.1 (AT3G12740.1 ALA-interacting subunit 1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.1e-129
Identity = 224/347 (64.55%), Postives = 272/347 (78.39%), Query Frame = 1


Query: 8   TSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPI 67
           T S+     G+ DSS   + SK+PKYS+FTQQELPACKPILTPGWVI++F+ + +IFIP+
Sbjct: 6   TPSSSAAAAGSIDSSAARRNSKRPKYSKFTQQELPACKPILTPGWVISTFLIISVIFIPL 65

Query: 68  GIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYI 127
           G+ SLFAS+ VVEIVD+YD  C+P   + + + +I+ +  NK+C+R L VPK MK P+Y+
Sbjct: 66  GVISLFASQDVVEIVDRYDSACIPLSDRANKVAYIQGTG-NKSCTRTLIVPKRMKQPIYV 125

Query: 128 YYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFND 187
           YYQL+NFYQNHRRYVKSRSD QLRS   E     C PE   G G PIVPCGLIAWSLFND
Sbjct: 126 YYQLENFYQNHRRYVKSRSDSQLRSVKDENQIDACKPEDDFG-GQPIVPCGLIAWSLFND 185

Query: 188 TYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDL 247
           TY  S  N+ L V+KK IAWKSD+E KFG +V+PKNFQ G+L GGA L+ + PLS QEDL
Sbjct: 186 TYVLSRNNQGLTVNKKGIAWKSDKEHKFGKNVFPKNFQKGNLTGGASLDPNKPLSDQEDL 245

Query: 248 IVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKN 307
           IVWMRTAALPTFRKLYGKIE+D E  + I V ++NNYNTYSF GKKKLVLSTTSW+GGKN
Sbjct: 246 IVWMRTAALPTFRKLYGKIESDLEKGENIQVTLQNNYNTYSFSGKKKLVLSTTSWLGGKN 305

Query: 308 DFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQ 355
           DFLGIAYL+VGG+C  LA+ F ++Y++KPR LGDP+YLSWNR   G+
Sbjct: 306 DFLGIAYLTVGGICFVLALAFTVMYLVKPRRLGDPTYLSWNRIPGGR 350

[Close]

BLAST of Lsi05G002620 vs. TAIR10
Match: AT5G46150.2 (AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein)

HSP 1 Score: 379.4 bits (973), Expect = 2.4e-105
Identity = 189/340 (55.59%), Postives = 246/340 (72.35%), Query Frame = 1


Query: 12  GRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIFIPIGIAS 71
           G M +    SS    +  K  Y +F QQ+LPACKP+LTP  VIT F+ +G +FIPIG+ +
Sbjct: 6   GSMNRAPDQSSFLRSRRSKALY-QFKQQKLPACKPVLTPISVITVFMLMGFVFIPIGLIT 65

Query: 72  LFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGPVYIYYQL 131
           L AS   +EI+D+YD +C+P E++ + L +I DS   K C+R L V K MK P++IYYQL
Sbjct: 66  LRASRDAIEIIDRYDVECIPEEYRTNKLLYITDSSIPKNCTRYLKVQKYMKAPIFIYYQL 125

Query: 132 DNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSLFNDTYGF 191
           DN+YQNHRRYVKSRSD+QL      + T +C PE +   G PIVPCGLIAWS+FNDT+ F
Sbjct: 126 DNYYQNHRRYVKSRSDQQLLHGLEYSHTSSCEPEES-SNGLPIVPCGLIAWSMFNDTFTF 185

Query: 192 SMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQEDLIVWM 251
           S +   L+VS+ +IAWKSD+E KFG +VYP NFQ+G+LIGGAKL+  IPLS QED IVWM
Sbjct: 186 SRERTKLNVSRNNIAWKSDREHKFGKNVYPINFQNGTLIGGAKLDPKIPLSDQEDFIVWM 245

Query: 252 RTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIGGKNDFLG 311
           R AAL +FRKLYG+IE D E   ++ V + NNYNTYSF G+KKL+LST++W+GG+NDFLG
Sbjct: 246 RAAALLSFRKLYGRIEEDLEPGKVVEVNLMNNYNTYSFSGQKKLILSTSNWLGGRNDFLG 305

Query: 312 IAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNA 352
           I YL VG   + ++I F+LL++  PRP GD    SWN+ +
Sbjct: 306 ITYLVVGSSSIVISIIFMLLHLKNPRPYGDN---SWNKKS 340

[Close]

BLAST of Lsi05G002620 vs. NCBI nr
Match: gi|659112393|ref|XP_008456197.1| (PREDICTED: ALA-interacting subunit 5-like [Cucumis melo])

HSP 1 Score: 703.7 bits (1815), Expect = 1.6e-199
Identity = 348/356 (97.75%), Postives = 353/356 (99.16%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV
Sbjct: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           GIIFIPIGIASLFASEQVVEIVDQYDHDCLPS+F+GDPLTFIKDSKTNKTCSRKLTVPKP
Sbjct: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSQFRGDPLTFIKDSKTNKTCSRKLTVPKP 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MKGPVY+YYQLDNFYQNHRRYVKSRSDKQLRSKAAEA TKTCAPE+TIGKGAPIVPCGLI
Sbjct: 121 MKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKAAEAHTKTCAPEATIGKGAPIVPCGLI 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTYGFSMKNKAL VSKKDIAWKSDQE+KFGSDVYPKNFQSG LIGGAKLNASIP
Sbjct: 181 AWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT
Sbjct: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 357
           SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN
Sbjct: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 356

[Close]

BLAST of Lsi05G002620 vs. NCBI nr
Match: gi|778679945|ref|XP_011651220.1| (PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus])

HSP 1 Score: 698.4 bits (1801), Expect = 6.7e-198
Identity = 345/356 (96.91%), Postives = 352/356 (98.88%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           MNNTHGATSSAG+MQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV
Sbjct: 1   MNNTHGATSSAGKMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           GIIFIPIGIASLFASEQVVEIVDQYDHDCLPS+F+G+PLTFIKDSKTNKTCSRKLTVPKP
Sbjct: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSQFRGNPLTFIKDSKTNKTCSRKLTVPKP 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MKGPVY+YYQLDNFYQNHRRYVKSRSDKQLRSKA EA TKTCAPE+TIGKGAPIVPCGLI
Sbjct: 121 MKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLI 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTYGFSMKNKAL VSKKDIAWKSDQE+KFGSDVYPKNFQSG LIGGAKLNASIP
Sbjct: 181 AWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT
Sbjct: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 357
           SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN
Sbjct: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 356

[Close]

BLAST of Lsi05G002620 vs. NCBI nr
Match: gi|700202341|gb|KGN57474.1| (hypothetical protein Csa_3G194410 [Cucumis sativus])

HSP 1 Score: 612.1 bits (1577), Expect = 6.3e-172
Identity = 311/340 (91.47%), Postives = 317/340 (93.24%), Query Frame = 1


Query: 1   MNNTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60
           MNNTHGATSSAG+MQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV
Sbjct: 1   MNNTHGATSSAGKMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAV 60

Query: 61  GIIFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKP 120
           GIIFIPIGIASLFASEQ                F+G+PLTFIKDSKTNKTCSRKLTVPKP
Sbjct: 61  GIIFIPIGIASLFASEQ----------------FRGNPLTFIKDSKTNKTCSRKLTVPKP 120

Query: 121 MKGPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLI 180
           MKGPVY+YYQLDNFYQNHRRYVKSRSDKQLRSKA EA TKTCAPE+TIGKGAPIVPCGLI
Sbjct: 121 MKGPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKADEAHTKTCAPEATIGKGAPIVPCGLI 180

Query: 181 AWSLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIP 240
           AWSLFNDTYGFSMKNKAL VSKKDIAWKSDQE+KFGSDVYPKNFQSG LIGGAKLNASIP
Sbjct: 181 AWSLFNDTYGFSMKNKALQVSKKDIAWKSDQERKFGSDVYPKNFQSGGLIGGAKLNASIP 240

Query: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300
           LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT
Sbjct: 241 LSQQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTT 300

Query: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLG 341
           SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKP   G
Sbjct: 301 SWIGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPSCAG 324

[Close]

BLAST of Lsi05G002620 vs. NCBI nr
Match: gi|1000951244|ref|XP_015579304.1| (PREDICTED: ALA-interacting subunit 1 [Ricinus communis])

HSP 1 Score: 561.2 bits (1445), Expect = 1.3e-156
Identity = 274/349 (78.51%), Postives = 310/349 (88.83%), Query Frame = 1


Query: 6   GATSSAGRMQQGNSDSSTPPKK-SKKPKYSRFTQQELPACKPILTPGWVITSFVAVGIIF 65
           GATSS+G    G +  S P K+ S+KPKYSRFTQQELPACKPILTPGWVIT+FVAVGIIF
Sbjct: 3   GATSSSG----GTTVESAPAKRNSRKPKYSRFTQQELPACKPILTPGWVITAFVAVGIIF 62

Query: 66  IPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMKGP 125
           IPIG+ +LFASE+VVEIVD+YD DC+P  +Q + L +I+ S TNKTC+R LT+PK MK P
Sbjct: 63  IPIGLTTLFASERVVEIVDRYDKDCIPHNYQNESLEYIQSSNTNKTCTRSLTIPKQMKSP 122

Query: 126 VYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAWSL 185
           V+IYY+LDNFYQNHRRYVKSRSDKQLRSKA E +T +C PE+     APIVPCGLIAWSL
Sbjct: 123 VFIYYELDNFYQNHRRYVKSRSDKQLRSKAGETNTDSCKPEAVTPSNAPIVPCGLIAWSL 182

Query: 186 FNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLSQQ 245
           FNDTYGFS+KNKAL+VSKK+IAWKSDQ  KFGSDVYPKNFQ+G LIGGAKLN+SIPLS+Q
Sbjct: 183 FNDTYGFSLKNKALYVSKKNIAWKSDQNYKFGSDVYPKNFQTGGLIGGAKLNSSIPLSEQ 242

Query: 246 EDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSWIG 305
            DLIVWMRTAALP+FRKLYG+IE D EAND+ITV IENNYNTYSFGGKKKLVLSTTSWIG
Sbjct: 243 VDLIVWMRTAALPSFRKLYGRIEMDLEANDVITVTIENNYNTYSFGGKKKLVLSTTSWIG 302

Query: 306 GKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAG 354
           GKNDFLG AYL+VGG+CLFLAI+FIL+YVIKPRPLGDPSYLSWNRN++G
Sbjct: 303 GKNDFLGKAYLTVGGICLFLAISFILVYVIKPRPLGDPSYLSWNRNSSG 347

[Close]

BLAST of Lsi05G002620 vs. NCBI nr
Match: gi|720047143|ref|XP_010270722.1| (PREDICTED: ALA-interacting subunit 1-like [Nelumbo nucifera])

HSP 1 Score: 552.0 bits (1421), Expect = 7.7e-154
Identity = 268/354 (75.71%), Postives = 304/354 (85.88%), Query Frame = 1


Query: 3   NTHGATSSAGRMQQGNSDSSTPPKKSKKPKYSRFTQQELPACKPILTPGWVITSFVAVGI 62
           N  GATSSA     G +D   P + SKKPKYSRFTQQELPACKPILTPGWVIT+F+ +GI
Sbjct: 2   NLKGATSSAA---DGGNDPPAPKRNSKKPKYSRFTQQELPACKPILTPGWVITTFIFIGI 61

Query: 63  IFIPIGIASLFASEQVVEIVDQYDHDCLPSEFQGDPLTFIKDSKTNKTCSRKLTVPKPMK 122
           IFIPIG+ SLFASE+VVEIVD+YD DC+P  +  + L FI+ ++TNKTC+R L VPK MK
Sbjct: 62  IFIPIGLVSLFASERVVEIVDRYDKDCVPLNYSENMLAFIQSNETNKTCTRTLEVPKHMK 121

Query: 123 GPVYIYYQLDNFYQNHRRYVKSRSDKQLRSKAAEADTKTCAPESTIGKGAPIVPCGLIAW 182
            PVY+YYQLDNFYQNHRRYVKSRSDKQLRSK +E DT +C PE T   G+PIVPCGLIAW
Sbjct: 122 NPVYVYYQLDNFYQNHRRYVKSRSDKQLRSKESETDTSSCNPEGTTPGGSPIVPCGLIAW 181

Query: 183 SLFNDTYGFSMKNKALHVSKKDIAWKSDQEKKFGSDVYPKNFQSGSLIGGAKLNASIPLS 242
           SLFNDTYGFS+ N+ L VSKK+IAWKSDQ+ KFGSDV+PKNFQ+GSLIGGAKL+   PLS
Sbjct: 182 SLFNDTYGFSINNQVLEVSKKNIAWKSDQDSKFGSDVFPKNFQNGSLIGGAKLDDKKPLS 241

Query: 243 QQEDLIVWMRTAALPTFRKLYGKIEADFEANDIITVVIENNYNTYSFGGKKKLVLSTTSW 302
           +QEDLIVWMRTAALPTFRKLYGKIE D EA  +ITVVI+NNYNTYSFGGKKKLVLSTT+W
Sbjct: 242 EQEDLIVWMRTAALPTFRKLYGKIEVDLEAKQVITVVIQNNYNTYSFGGKKKLVLSTTTW 301

Query: 303 IGGKNDFLGIAYLSVGGLCLFLAITFILLYVIKPRPLGDPSYLSWNRNAAGQAN 357
           IGGKNDFLGIAYL+VGG+CLF AI+FIL+YVIKPRPLGDPS+LSWNRN +G  N
Sbjct: 302 IGGKNDFLGIAYLTVGGMCLFFAISFILVYVIKPRPLGDPSFLSWNRNPSGHPN 352

The following BLAST results are available for this feature:

BLAST of Lsi05G002620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALIS5_ARATH	1.3e-132	65.44	ALA-interacting subunit 5 OS=Arabidopsis thaliana GN=ALIS5 PE=1 SV=1	[more]
ALIS3_ARATH	5.4e-131	65.34	ALA-interacting subunit 3 OS=Arabidopsis thaliana GN=ALIS3 PE=1 SV=1	[more]
ALIS4_ARATH	6.6e-129	67.81	Putative ALA-interacting subunit 4 OS=Arabidopsis thaliana GN=ALIS4 PE=2 SV=2	[more]
ALIS1_ARATH	1.9e-128	64.55	ALA-interacting subunit 1 OS=Arabidopsis thaliana GN=ALIS1 PE=1 SV=1	[more]
ALIS2_ARATH	4.3e-104	55.59	Putative ALA-interacting subunit 2 OS=Arabidopsis thaliana GN=ALIS2 PE=2 SV=1	[more]

BLAST of Lsi05G002620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L926_CUCSA	4.4e-172	91.47	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G194410 PE=4 SV=1	[more]
A0A061GGB3_THECC	4.0e-149	75.42	ALA-interacting subunit 1 OS=Theobroma cacao GN=TCM_027482 PE=4 SV=1	[more]
B9MWW5_POPTR	4.4e-148	73.14	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s02040g PE=4 SV=1	[more]
W9RPY7_9ROSA	1.1e-146	74.79	ALA-interacting subunit 3 OS=Morus notabilis GN=L484_007781 PE=4 SV=1	[more]
V4S853_9ROSI	2.5e-143	73.68	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012117mg PE=4 SV=1	[more]

BLAST of Lsi05G002620 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G79450.1	7.2e-134	65.44	ALA-interacting subunit 5	[more]
AT1G54320.1	3.0e-132	65.34	LEM3 (ligand-effect modulator 3) family protein / CDC50 family prote...	[more]
AT1G16360.1	3.7e-130	67.81	LEM3 (ligand-effect modulator 3) family protein / CDC50 family prote...	[more]
AT3G12740.1	1.1e-129	64.55	ALA-interacting subunit 1	[more]
AT5G46150.2	2.4e-105	55.59	LEM3 (ligand-effect modulator 3) family protein / CDC50 family prote...	[more]

BLAST of Lsi05G002620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112393\|ref\|XP_008456197.1\|	1.6e-199	97.75	PREDICTED: ALA-interacting subunit 5-like [Cucumis melo]	[more]
gi\|778679945\|ref\|XP_011651220.1\|	6.7e-198	96.91	PREDICTED: ALA-interacting subunit 5-like [Cucumis sativus]	[more]
gi\|700202341\|gb\|KGN57474.1\|	6.3e-172	91.47	hypothetical protein Csa_3G194410 [Cucumis sativus]	[more]
gi\|1000951244\|ref\|XP_015579304.1\|	1.3e-156	78.51	PREDICTED: ALA-interacting subunit 1 [Ricinus communis]	[more]
gi\|720047143\|ref\|XP_010270722.1\|	7.7e-154	75.71	PREDICTED: ALA-interacting subunit 1-like [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005045	CDC50/LEM3_fam

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0051301	cell division
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002620.1	Lsi05G002620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005045	CDC50/LEM3 family	PIR	PIRSF015840	Lem3/Cdc50	coord: 1..350 score: 7.3E
IPR005045	CDC50/LEM3 family	PANTHER	PTHR10926	CELL CYCLE CONTROL PROTEIN 50	coord: 11..353 score: 1.3E
IPR005045	CDC50/LEM3 family	PFAM	PF03381	CDC50	coord: 72..337 score: 2.5
None	No IPR available	PANTHER	PTHR10926:SF28	SUBFAMILY NOT NAMED	coord: 11..353 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi05G002620	Csa3G194410	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002620	CSPI03G17910	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002620	Cucsa.108700	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002620	CmaCh14G008770	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002620	CmaCh01G003320	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002620	CmoCh01G003470	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002620	CmoCh14G008960	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002620	Cla013121	Watermelon (97103) v1	lsiwmB361
Lsi05G002620	MELO3C019568	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002620	ClCG05G010500	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002620	MELO3C019568.2	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002620	Cla97C05G092870	Watermelon (97103) v2	lsiwmbB329
Lsi05G002620	Bhi01G001304	Wax gourd	lsiwgoB431
Lsi05G002620	Cp4.1LG03g05670	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G002620	Cp4.1LG02g16690	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002620	CsGy3G017870	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002620	Carg24248	Silver-seed gourd	carlsiB158
Lsi05G002620	Carg07423	Silver-seed gourd	carlsiB700
Lsi05G002620	CsaV3_3G018000	Cucumber (Chinese Long) v3	cuclsiB230

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None