Lsi05G002550 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G002550
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Cis,cis-muconate transport protein
Location	chr05 : 3265439 .. 3267283 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCGCAGTCACCATTATGTATTATGCCCTCGTATTTGCAGATGGTCATGCCAAAATTAGGTTGGAGATGGCTCCTCGCATTTTCTTCCTTTCCTTCATTTCTCCTACTACTCTTCTACCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGGTAGAACAAGTGATGCAGCTATTATTTTAGAGAAAATAGCACGACGTAATAGAACGAATCTCCCCCCTGGCATTCTTGTTTCTAGTCACTCGTATGATTTTGAGGAGCAAAGTATTCCCGTGGAAGATGTGCATTTGCTCTCACTAACACAAACTAAAGTTGAAACTTCTCAAGCAATAAAATCTAATATGCTGGGTCTCTCTCCATTGTTAAAGCTTCTTTCTCGAGAACTGCTTGTATCTACATTGCTCCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGCTGCTGACCACTGAGTTGACTGGGACGAGTAGATGTACGTCTACTGATATACATCTAAAAGAACACGAAGATGTCAACTACAGAGATGTCTTTATCTCGAGTTTTGCAGGTAACAGTCTTTTGGTTGTTCCAAAGTTTTCTCTAGCCAGGGGCAAAGGTTTGGTGCGTGGATGATAATCTAACCTCAAATTTTCTTTGAAGAATTACCTGGTCTCGCGTTATCAGCTGTCATGGTTGACAAACTAGGGCGTAAGTTATCGATGTCTTCAATGTTCTTCCTGGGCGCTACATTTCTATTTCCTCTAGCATTTTATCGGGTTGATGGCTTAACAACAGCCCTTTTGTTTGGAGCTCGCATATGTGTCACATCTACATTCACAGTTGTCTATATATATGCTCCCGAGGTAAGTTGGAACACTAAACTTTGCATCGCCAAGAGACAATTGCCACATCATGCATCACAACTAGAAATACTTTTTTTCTGCAGGTTCATATTATTTATGCTCCCAATAATAATGTGATTTTTTAAGAGGATGGTCTGTTGTCTGCTTTTGATACTTGGTTTTTTTTTTTTTTATCTGGACTTGCATTCTCCTATCATATGTCTTTCTCCTTTAAAACTGAAAACTTTTTTAGTCTCCATGTTAGTTGCTTGTGTGATTTATCATTACATGATTTATTGAATTACATTCTCTTATAAGAATATCTTATTTTTTTACCAAATTATCTTTCCTCTGTCCTTCATTCCACTTTGGTTCGAAATGTGATTACCAACCAAAAATTTCCTCCATACATGTTTATGTTTCTTGGTGCCATAATTGTTTACACCCCGAGAATTTTATGTAGTTCTTAAGCTCTTTCTTTGCTGTGGTGTAACGTATTTATACTCTAACAATCAATGCAAACCACAGATATATCCGACCTCAATCCGAACGACTGGTGTCGGGGTTGCTAGCTCTGTAGGAAGAATTGGGGGAATGATATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGCCATCAAACAGCGGCTATTATTTTGTTTGAGATTGTATTTTTTCTGTCAGGGATCTGTGTTGTGCTGTTTCCATTCGAAACCAAGGGACAAGATCTTCCTGAAAAAGTGTAGCTGAAACTTAGAAATCATATTGATCACATAGTTATAATTGGACTCGATCTCACCCCTATTACCTCTATTCATTATCTGCTGCTAATAGATATTGTTGAAGAGACCGTGCCTTCGGTCTCATCTTGCACATGTATAATTCAAGGTCTAGCAAAATGCTATTGAAATTCTCAAACTATTAGATGGATACAATGTAGAACTTACACGACTTGATTTATGTATAATATATATGAGCAAATGTTGAAATGTGATTTCTGA

mRNA sequence

ATGGTCGCAGTCACCATTATGTATTATGCCCTCGTATTTGCAGATGGTCATGCCAAAATTAGGTTGGAGATGGCTCCTCGCATTTTCTTCCTTTCCTTCATTTCTCCTACTACTCTTCTACCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGTCACTCGTATGATTTTGAGGAGCAAAGTATTCCCGTGGAAGATGTGCATTTGCTCTCACTAACACAAACTAAAGTTGAAACTTCTCAAGCAATAAAATCTAATATGCTGGGTCTCTCTCCATTGTTAAAGCTTCTTTCTCGAGAACTGCTTGTATCTACATTGCTCCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGCTGCTGACCACTGAGTTGACTGGGACGAGTAGATGTACGTCTACTGATATACATCTAAAAGAACACGAAGATGTCAACTACAGAGATGTCTTTATCTCGAGTTTTGCAGAATTACCTGGTCTCGCGTTATCAGCTGTCATGGTTGACAAACTAGGGCGTAAGTTATCGATGTCTTCAATGTTCTTCCTGGGCGCTACATTTCTATTTCCTCTAGCATTTTATCGGGTTGATGGCTTAACAACAGCCCTTTTGTTTGGAGCTCGCATATGTGTCACATCTACATTCACAGTTGTCTATATATATGCTCCCGAGATATATCCGACCTCAATCCGAACGACTGGTGTCGGGGTTGCTAGCTCTGTAGGAAGAATTGGGGGAATGATATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGCCATCAAACAGCGGCTATTATTTTGTTTGAGATTGTATTTTTTCTGTCAGGGATCTGTGTTGTGCTGTTTCCATTCGAAACCAAGGGACAAGATCTTCCTGAAAAAGTGTAGCTGAAACTTAGAAATCATATTGATCACATAGTTATAATTGGACTCGATCTCACCCCTATTACCTCTATTCATTATCTGCTGCTAATAGATATTGTTGAAGAGACCGTGCCTTCGGTCTCATCTTGCACATGTATAATTCAAGGTCTAGCAAAATGCTATTGAAATTCTCAAACTATTAGATGGATACAATGTAGAACTTACACGACTTGATTTATGTATAATATATATGAGCAAATGTTGAAATGTGATTTCTGA

Coding sequence (CDS)

ATGGTCGCAGTCACCATTATGTATTATGCCCTCGTATTTGCAGATGGTCATGCCAAAATTAGGTTGGAGATGGCTCCTCGCATTTTCTTCCTTTCCTTCATTTCTCCTACTACTCTTCTACCAATCTACTCCAGAGTCCCCACGGTATCTCTGTTTACAAGTCACTCGTATGATTTTGAGGAGCAAAGTATTCCCGTGGAAGATGTGCATTTGCTCTCACTAACACAAACTAAAGTTGAAACTTCTCAAGCAATAAAATCTAATATGCTGGGTCTCTCTCCATTGTTAAAGCTTCTTTCTCGAGAACTGCTTGTATCTACATTGCTCCTCTGGGTGGTTTTCTTTGGAAATGCATTCTCTTATTATGGCCTCGTGCTGCTGACCACTGAGTTGACTGGGACGAGTAGATGTACGTCTACTGATATACATCTAAAAGAACACGAAGATGTCAACTACAGAGATGTCTTTATCTCGAGTTTTGCAGAATTACCTGGTCTCGCGTTATCAGCTGTCATGGTTGACAAACTAGGGCGTAAGTTATCGATGTCTTCAATGTTCTTCCTGGGCGCTACATTTCTATTTCCTCTAGCATTTTATCGGGTTGATGGCTTAACAACAGCCCTTTTGTTTGGAGCTCGCATATGTGTCACATCTACATTCACAGTTGTCTATATATATGCTCCCGAGATATATCCGACCTCAATCCGAACGACTGGTGTCGGGGTTGCTAGCTCTGTAGGAAGAATTGGGGGAATGATATGCCCTCTCGTGGCAGTAGCTCTGGTTAAAGGATGCCATCAAACAGCGGCTATTATTTTGTTTGAGATTGTATTTTTTCTGTCAGGGATCTGTGTTGTGCTGTTTCCATTCGAAACCAAGGGACAAGATCTTCCTGAAAAAGTGTAG

Protein sequence

MVAVTIMYYALVFADGHAKIRLEMAPRIFFLSFISPTTLLPIYSRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSRELLVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAELPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICVVLFPFETKGQDLPEKV

Homology

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BLAST of Lsi05G002550 vs. Swiss-Prot
Match: OCT7_ARATH (Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 6.3e-72
Identity = 147/246 (59.76%), Postives = 184/246 (74.80%), Query Frame = 1


Query: 60  EEQSIPVEDVHLLSLTQT--KVETSQAI-KSNMLGLSPLLKLLSRELLVSTLLLWVVFFG 119
           E ++IP E+ HLL   ++   V  S+ + K++      LL LLS  L+  TLLLWVVFFG
Sbjct: 244 ENKNIPTENTHLLKAGESGEAVAVSKIVLKADKEPGFSLLALLSPTLMKRTLLLWVVFFG 303

Query: 120 NAFSYYGLVLLTTELTGT-SRCTSTDIHLKEHEDVNYRDVFISSFAELPGLALSAVMVDK 179
           NAF+YYG+VLLTTEL  + +RC  T+  L+   DVNYRDVFI+SFAE PGL +SA MVD+
Sbjct: 304 NAFAYYGVVLLTTELNNSHNRCYPTEKQLRNSNDVNYRDVFIASFAEFPGLLISAAMVDR 363

Query: 180 LGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYIYAPEIYPTSI 239
           LGRK SM+SM F    FL PL  ++   +TT LLFG RIC+++ FTVVYIYAPEIYPT++
Sbjct: 364 LGRKASMASMLFTCCIFLLPLLSHQSPFITTVLLFGGRICISAAFTVVYIYAPEIYPTAV 423

Query: 240 RTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICVVLFPFETKGQ 299
           RTTGVGV SSVGRIGG++CPLVAV LV GCHQT A++LFE+V  +SGICV LFPFET G+
Sbjct: 424 RTTGVGVGSSVGRIGGILCPLVAVGLVHGCHQTIAVLLFEVVILVSGICVCLFPFETSGR 483

Query: 300 DLPEKV 302
           DL + +
Sbjct: 484 DLTDSI 489

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BLAST of Lsi05G002550 vs. Swiss-Prot
Match: SVOP_MOUSE (Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 8.3e-24
Identity = 73/206 (35.44%), Postives = 108/206 (52.43%), Query Frame = 1


Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHE-----------DVNYRD 165
           +TLLLW ++F NAFSYYGLVLLTTEL       S     K  E             +Y D
Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSKEDYMD 375

Query: 166 VFISSFAELPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARI 225
           +  ++ +E PG+ ++  ++D+LGRK +M+  F + +     L       + T LLF AR 
Sbjct: 376 LLWTTLSEFPGVLVTLWVIDRLGRKKTMALCFIIFSLCSLLLFICIGRNVLTLLLFIARA 435

Query: 226 CVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVA-VALVKGCHQTAAIIL 285
            ++  F   Y+Y PE+YPT+ R  G+G  S + R+G +I P +A V L    + T A+  
Sbjct: 436 FISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAV-- 495

Query: 286 FEIVFFLSGICVVLFPFETKGQDLPE 300
           +     L+G+     P ETKG+ L E
Sbjct: 496 YSGCCLLAGVASCFLPIETKGRALQE 519

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BLAST of Lsi05G002550 vs. Swiss-Prot
Match: SVOP_BOVIN (Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.4e-23
Identity = 75/207 (36.23%), Postives = 112/207 (54.11%), Query Frame = 1


Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHE-----------DVNYRD 165
           +TLLLW ++F NAFSYYGLVLLTTEL       S     K  E           + +Y D
Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCSISSRKKAVEAKCSLACEYLSEEDYMD 375

Query: 166 VFISSFAELPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVD-GLTTALLFGAR 225
           +  ++ +E PG+ ++  ++D+LGRK +M ++ F+  +F   L F  V   + T LLF AR
Sbjct: 376 LLWTTLSEFPGVLVTLWIIDRLGRKKTM-ALCFVVFSFCSLLLFICVGRNMLTLLLFIAR 435

Query: 226 ICVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVA-VALVKGCHQTAAII 285
             ++  F   Y+Y PE+YPT+ R  G+G  S + R+G +I P +A V L    + T A+ 
Sbjct: 436 AFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTLAV- 495

Query: 286 LFEIVFFLSGICVVLFPFETKGQDLPE 300
            +     L+ +     P ETKG+ L E
Sbjct: 496 -YSGCCLLAALASCFLPIETKGRGLQE 519

[Close]

BLAST of Lsi05G002550 vs. Swiss-Prot
Match: SVOP_PONAB (Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = 1


Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGT--------------SRCTSTDIHLKEHEDVN 165
           +TLLLW ++F NAFSYYGLVLLTTEL                 ++C+    +L E +   
Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEED--- 375

Query: 166 YRDVFISSFAELPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVD-GLTTALLF 225
           Y D+  ++ +E PG+ ++  ++D+LGRK +M+  F +  +F   L F  V   + T LLF
Sbjct: 376 YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVI-FSFCSLLLFICVGRNVLTLLLF 435

Query: 226 GARICVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVA-VALVKGCHQTA 285
            AR  ++  F   Y+Y PE+YPT+ R  G+G  S + R+G +I P +A V L    + T 
Sbjct: 436 IARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTL 495

Query: 286 AIILFEIVFFLSGICVVLFPFETKGQDLPE 300
           A+  +     L+ +     P ETKG+ L E
Sbjct: 496 AV--YSGCCLLAALASCFLPIETKGRGLQE 519

[Close]

BLAST of Lsi05G002550 vs. Swiss-Prot
Match: SVOP_HUMAN (Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 2.4e-23
Identity = 75/210 (35.71%), Postives = 114/210 (54.29%), Query Frame = 1


Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGT--------------SRCTSTDIHLKEHEDVN 165
           +TLLLW ++F NAFSYYGLVLLTTEL                 ++C+    +L E +   
Sbjct: 316 TTLLLWFIWFSNAFSYYGLVLLTTELFQAGDVCGISSRKKAVEAKCSLACEYLSEED--- 375

Query: 166 YRDVFISSFAELPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVD-GLTTALLF 225
           Y D+  ++ +E PG+ ++  ++D+LGRK +M+  F +  +F   L F  V   + T LLF
Sbjct: 376 YMDLLWTTLSEFPGVLVTLWIIDRLGRKKTMALCFVI-FSFCSLLLFICVGRNVLTLLLF 435

Query: 226 GARICVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVA-VALVKGCHQTA 285
            AR  ++  F   Y+Y PE+YPT+ R  G+G  S + R+G +I P +A V L    + T 
Sbjct: 436 IARAFISGGFQAAYVYTPEVYPTATRALGLGTCSGMARVGALITPFIAQVMLESSVYLTL 495

Query: 286 AIILFEIVFFLSGICVVLFPFETKGQDLPE 300
           A+  +     L+ +     P ETKG+ L E
Sbjct: 496 AV--YSGCCLLAALASCFLPIETKGRGLQE 519

[Close]

BLAST of Lsi05G002550 vs. TrEMBL
Match: A0A0A0L6X7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198470 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 6.4e-116
Identity = 223/258 (86.43%), Postives = 232/258 (89.92%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           + +P   L +SHSYDFEEQ   VEDVHLLS TQTKVETSQA  S+M+  SPLLKLLSREL
Sbjct: 245 TNLPPGILVSSHSYDFEEQGTAVEDVHLLSPTQTKVETSQATTSSMVAFSPLLKLLSREL 304

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAEL 163
           L+STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTD HL  HEDVNYRDVFISSFAE 
Sbjct: 305 LLSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDTHLNVHEDVNYRDVFISSFAEF 364

Query: 164 PGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVV 223
           PGL LSAVMVDKLGRKLSMSSMFFLGA FLFPL FYR DGLTT LLFGAR+C+TSTFTVV
Sbjct: 365 PGLLLSAVMVDKLGRKLSMSSMFFLGAIFLFPLVFYRSDGLTTGLLFGARVCITSTFTVV 424

Query: 224 YIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGI 283
           YIYAPEIYPTSIRTTGVGVASSVGRIGGM CPLVAVALVKGCHQT AII FEIVF LSGI
Sbjct: 425 YIYAPEIYPTSIRTTGVGVASSVGRIGGMTCPLVAVALVKGCHQTMAIIFFEIVFILSGI 484

Query: 284 CVVLFPFETKGQDLPEKV 302
           CV+LFPFETKGQDLPEKV
Sbjct: 485 CVMLFPFETKGQDLPEKV 502

[Close]

BLAST of Lsi05G002550 vs. TrEMBL
Match: A0A059AK14_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03196 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 7.2e-83
Identity = 163/259 (62.93%), Postives = 204/259 (78.76%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           + +P   L + ++   +E SIP ED  LL+  + +  T  + + +M G S LL LLS  L
Sbjct: 229 TELPAGVLVSDYNVQLQENSIPSEDTQLLTSRRKENRTLDSSEQSMGGFSSLLMLLSPRL 288

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELT-GTSRCTSTDIHLKEHEDVNYRDVFISSFAE 163
           L ST+LLW+ FFGNAF+YYGLVLLTTEL+ G ++C+    HLK+  D+NY DVF++SFAE
Sbjct: 289 LKSTMLLWIYFFGNAFAYYGLVLLTTELSNGRNKCSPYQSHLKKTSDINYGDVFVTSFAE 348

Query: 164 LPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTV 223
            PGL +SA +VDKLGRKLSMSSM FL   FL PL  ++  GLTT+LLFGARIC+T++FT+
Sbjct: 349 FPGLLISAAIVDKLGRKLSMSSMLFLCCIFLLPLVVHQPAGLTTSLLFGARICITASFTI 408

Query: 224 VYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSG 283
           +YIYAPE+YPTSIRTTGVGVASS+GRIGGMICPLVAVAL+KGCHQTA+IILFEIV F+SG
Sbjct: 409 IYIYAPEVYPTSIRTTGVGVASSIGRIGGMICPLVAVALIKGCHQTASIILFEIVIFVSG 468

Query: 284 ICVVLFPFETKGQDLPEKV 302
           IC VLFPFETKG+DL + +
Sbjct: 469 ICAVLFPFETKGRDLSDTI 487

[Close]

BLAST of Lsi05G002550 vs. TrEMBL
Match: V7AUH4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G165500g PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.6e-82
Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1


Query: 46  VPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSRELLV 105
           +P+ +L + H  + ++   P ED HLLS T  ++E    + SN+ G+S L+ LLS +L  
Sbjct: 230 LPSGNLVSDHEIELQQIDNPSEDAHLLSTTTNEIEHPSGMDSNLGGISSLMMLLSPKLAR 289

Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAELPG 165
           ST+LLW VFFGNAFSYYGLVLLTTEL G S+C S  +  ++ +DV+Y+ VFI+SFAELPG
Sbjct: 290 STVLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVSYKSVFIASFAELPG 349

Query: 166 LALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYI 225
           L LSAV VDKLGRKLSMSSMFF+ + FL PL FY  +GLTT LLF ARIC+T+TFT+VYI
Sbjct: 350 LLLSAVAVDKLGRKLSMSSMFFMCSIFLLPLVFYLPEGLTTGLLFLARICITATFTIVYI 409

Query: 226 YAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICV 285
           YAPE+YPTS+RTTGVG+AS+VGRIGGMICPLVAV LV GCHQTAA++LFE++  LSGICV
Sbjct: 410 YAPEMYPTSVRTTGVGIASAVGRIGGMICPLVAVGLVHGCHQTAAVLLFEVIALLSGICV 469

Query: 286 VLFPFETKGQDLPEKV 302
           +  P ET GQ+L + V
Sbjct: 470 MFLPIETMGQELRDSV 485

[Close]

BLAST of Lsi05G002550 vs. TrEMBL
Match: V7ARC2_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G165500g PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.6e-82
Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1


Query: 46  VPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSRELLV 105
           +P+ +L + H  + ++   P ED HLLS T  ++E    + SN+ G+S L+ LLS +L  
Sbjct: 157 LPSGNLVSDHEIELQQIDNPSEDAHLLSTTTNEIEHPSGMDSNLGGISSLMMLLSPKLAR 216

Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAELPG 165
           ST+LLW VFFGNAFSYYGLVLLTTEL G S+C S  +  ++ +DV+Y+ VFI+SFAELPG
Sbjct: 217 STVLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVSYKSVFIASFAELPG 276

Query: 166 LALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYI 225
           L LSAV VDKLGRKLSMSSMFF+ + FL PL FY  +GLTT LLF ARIC+T+TFT+VYI
Sbjct: 277 LLLSAVAVDKLGRKLSMSSMFFMCSIFLLPLVFYLPEGLTTGLLFLARICITATFTIVYI 336

Query: 226 YAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICV 285
           YAPE+YPTS+RTTGVG+AS+VGRIGGMICPLVAV LV GCHQTAA++LFE++  LSGICV
Sbjct: 337 YAPEMYPTSVRTTGVGIASAVGRIGGMICPLVAVGLVHGCHQTAAVLLFEVIALLSGICV 396

Query: 286 VLFPFETKGQDLPEKV 302
           +  P ET GQ+L + V
Sbjct: 397 MFLPIETMGQELRDSV 412

[Close]

BLAST of Lsi05G002550 vs. TrEMBL
Match: A0A061G8P8_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027633 PE=4 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 1.4e-81
Identity = 164/259 (63.32%), Postives = 199/259 (76.83%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           ++VP+  L + H  +   +SIP+ED  LL    ++  T      N  G+S +LKLLS EL
Sbjct: 228 AKVPSGILVSDHEIELAGKSIPMEDTQLLPPKDSEYTTPMETNPNAGGISSVLKLLSPEL 287

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTEL-TGTSRCTSTDIHLKEHEDVNYRDVFISSFAE 163
           + ST LLW+VFFGNAFSYYGLVLLTTEL  G +RC   ++H ++ +DV+Y+DVFI++FAE
Sbjct: 288 VRSTTLLWIVFFGNAFSYYGLVLLTTELHNGRNRCGPNELHSEKSQDVSYKDVFITTFAE 347

Query: 164 LPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTV 223
            PGL LSA  VDK GRK SMS MFFL   FL PL F++   LTT LLFGARIC+T+TFTV
Sbjct: 348 FPGLLLSAATVDKFGRKFSMSIMFFLCCIFLPPLVFHQPQALTTGLLFGARICITTTFTV 407

Query: 224 VYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSG 283
           VYIYAPEIYPTSIR+TGVGVASSVGRIGGM+CPLVAV LV GCHQTAAI+LFEIV F+SG
Sbjct: 408 VYIYAPEIYPTSIRSTGVGVASSVGRIGGMVCPLVAVGLVHGCHQTAAILLFEIVIFVSG 467

Query: 284 ICVVLFPFETKGQDLPEKV 302
           ICV+ FP ETKG+DL + +
Sbjct: 468 ICVLFFPLETKGRDLSDSI 486

[Close]

BLAST of Lsi05G002550 vs. TAIR10
Match: AT3G13050.1 (AT3G13050.1 Major facilitator superfamily protein)

HSP 1 Score: 272.3 bits (695), Expect = 3.5e-73
Identity = 147/246 (59.76%), Postives = 184/246 (74.80%), Query Frame = 1


Query: 60  EEQSIPVEDVHLLSLTQT--KVETSQAI-KSNMLGLSPLLKLLSRELLVSTLLLWVVFFG 119
           E ++IP E+ HLL   ++   V  S+ + K++      LL LLS  L+  TLLLWVVFFG
Sbjct: 244 ENKNIPTENTHLLKAGESGEAVAVSKIVLKADKEPGFSLLALLSPTLMKRTLLLWVVFFG 303

Query: 120 NAFSYYGLVLLTTELTGT-SRCTSTDIHLKEHEDVNYRDVFISSFAELPGLALSAVMVDK 179
           NAF+YYG+VLLTTEL  + +RC  T+  L+   DVNYRDVFI+SFAE PGL +SA MVD+
Sbjct: 304 NAFAYYGVVLLTTELNNSHNRCYPTEKQLRNSNDVNYRDVFIASFAEFPGLLISAAMVDR 363

Query: 180 LGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYIYAPEIYPTSI 239
           LGRK SM+SM F    FL PL  ++   +TT LLFG RIC+++ FTVVYIYAPEIYPT++
Sbjct: 364 LGRKASMASMLFTCCIFLLPLLSHQSPFITTVLLFGGRICISAAFTVVYIYAPEIYPTAV 423

Query: 240 RTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICVVLFPFETKGQ 299
           RTTGVGV SSVGRIGG++CPLVAV LV GCHQT A++LFE+V  +SGICV LFPFET G+
Sbjct: 424 RTTGVGVGSSVGRIGGILCPLVAVGLVHGCHQTIAVLLFEVVILVSGICVCLFPFETSGR 483

Query: 300 DLPEKV 302
           DL + +
Sbjct: 484 DLTDSI 489

[Close]

BLAST of Lsi05G002550 vs. TAIR10
Match: AT3G20660.1 (AT3G20660.1 organic cation/carnitine transporter4)

HSP 1 Score: 51.2 bits (121), Expect = 1.3e-06
Identity = 48/175 (27.43%), Postives = 92/175 (52.57%), Query Frame = 1


Query: 92  LSPLLKLLSRELLVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVN 151
           LSPL+++    L++S  + + V    +  YYGL L    L        T+++L       
Sbjct: 323 LSPLMRM---RLVISVAISFTV----SIVYYGLSLNVGNL-------KTNLYL------- 382

Query: 152 YRDVFISSFAELPGLALSAVMVDKLGRK-LSMSSMFFLGATFLFPLAFYRVDGL----TT 211
             +VF+++ +E+P  A++AV++DK GRK LS+ + +F   + +F L  + V G     + 
Sbjct: 383 --NVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWF---SCVFCLVGFSVWGAGPWKSV 442

Query: 212 ALLFGAR--ICVTSTFTVVYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAV 260
            ++ G      +  T+ +++IY  E++PT +R   +G A+   ++G ++ P V V
Sbjct: 443 RMVSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCATQAAQMGAILAPFVVV 471

[Close]

BLAST of Lsi05G002550 vs. NCBI nr
Match: gi|659112367|ref|XP_008456184.1| (PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 7.5e-118
Identity = 226/258 (87.60%), Postives = 235/258 (91.09%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           + +P   L +SHSYDFEEQ   VEDVHLLS TQTKVETSQA  S+M+ LSPLLKLLSREL
Sbjct: 245 TNLPPGILVSSHSYDFEEQGTAVEDVHLLSQTQTKVETSQATTSSMVALSPLLKLLSREL 304

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAEL 163
           L+STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLK HEDVNYRDVFISSFAE 
Sbjct: 305 LLSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKVHEDVNYRDVFISSFAEF 364

Query: 164 PGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVV 223
           PGL LSAVMVDKLGRKLSMSSMFFLGA FLFPL FYR DGLTT LLFGAR+C+TSTFTVV
Sbjct: 365 PGLLLSAVMVDKLGRKLSMSSMFFLGAIFLFPLVFYRSDGLTTGLLFGARVCITSTFTVV 424

Query: 224 YIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGI 283
           YIYAPEIYPTSIRTTGVGVASSVGRIGGM CPLVAVALVKGCHQT AI+ FEIVF LSGI
Sbjct: 425 YIYAPEIYPTSIRTTGVGVASSVGRIGGMTCPLVAVALVKGCHQTVAIVFFEIVFILSGI 484

Query: 284 CVVLFPFETKGQDLPEKV 302
           CVVLFPFETKGQDLPEKV
Sbjct: 485 CVVLFPFETKGQDLPEKV 502

[Close]

BLAST of Lsi05G002550 vs. NCBI nr
Match: gi|449445929|ref|XP_004140724.1| (PREDICTED: organic cation/carnitine transporter 7 [Cucumis sativus])

HSP 1 Score: 425.2 bits (1092), Expect = 9.2e-116
Identity = 223/258 (86.43%), Postives = 232/258 (89.92%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           + +P   L +SHSYDFEEQ   VEDVHLLS TQTKVETSQA  S+M+  SPLLKLLSREL
Sbjct: 245 TNLPPGILVSSHSYDFEEQGTAVEDVHLLSPTQTKVETSQATTSSMVAFSPLLKLLSREL 304

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAEL 163
           L+STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTD HL  HEDVNYRDVFISSFAE 
Sbjct: 305 LLSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDTHLNVHEDVNYRDVFISSFAEF 364

Query: 164 PGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVV 223
           PGL LSAVMVDKLGRKLSMSSMFFLGA FLFPL FYR DGLTT LLFGAR+C+TSTFTVV
Sbjct: 365 PGLLLSAVMVDKLGRKLSMSSMFFLGAIFLFPLVFYRSDGLTTGLLFGARVCITSTFTVV 424

Query: 224 YIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGI 283
           YIYAPEIYPTSIRTTGVGVASSVGRIGGM CPLVAVALVKGCHQT AII FEIVF LSGI
Sbjct: 425 YIYAPEIYPTSIRTTGVGVASSVGRIGGMTCPLVAVALVKGCHQTMAIIFFEIVFILSGI 484

Query: 284 CVVLFPFETKGQDLPEKV 302
           CV+LFPFETKGQDLPEKV
Sbjct: 485 CVMLFPFETKGQDLPEKV 502

[Close]

BLAST of Lsi05G002550 vs. NCBI nr
Match: gi|764610471|ref|XP_011467508.1| (PREDICTED: organic cation/carnitine transporter 7 [Fragaria vesca subsp. vesca])

HSP 1 Score: 316.6 bits (810), Expect = 4.6e-83
Identity = 164/258 (63.57%), Postives = 205/258 (79.46%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           S++P+  L +  + +  E+S P ED  L+S    +  + + + SNM G+S LL LLS  L
Sbjct: 227 SKLPSGILVSDLTVELSEKSTPSEDTSLISPRTNEDASPKEMDSNMGGISSLLMLLSPNL 286

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAEL 163
           + STLLLWVVFFGNAFSYYGLVLLT+EL G S+C  T++     +D+NYR++FI+SFAEL
Sbjct: 287 VRSTLLLWVVFFGNAFSYYGLVLLTSELNGHSQCVPTEVKSVASQDINYRNIFIASFAEL 346

Query: 164 PGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVV 223
           PGL +SA  VD+LGRKLSMS MFFL   FL PL  ++ +GLTTALLFGARIC+T+TFT+V
Sbjct: 347 PGLIISAATVDRLGRKLSMSGMFFLCCLFLLPLVVHQPEGLTTALLFGARICITATFTIV 406

Query: 224 YIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGI 283
           YIYAPEIYPTS+RTTGVGV S++GRIGGMICPLVAVALV GCHQTA+I+LFE+V  LSGI
Sbjct: 407 YIYAPEIYPTSVRTTGVGVGSAMGRIGGMICPLVAVALVHGCHQTASILLFEVVILLSGI 466

Query: 284 CVVLFPFETKGQDLPEKV 302
           CV+LFPFETKG++L + V
Sbjct: 467 CVMLFPFETKGRELSDSV 484

[Close]

BLAST of Lsi05G002550 vs. NCBI nr
Match: gi|702484949|ref|XP_010034101.1| (PREDICTED: organic cation/carnitine transporter 7 [Eucalyptus grandis])

HSP 1 Score: 315.5 bits (807), Expect = 1.0e-82
Identity = 163/259 (62.93%), Postives = 204/259 (78.76%), Query Frame = 1


Query: 44  SRVPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSREL 103
           + +P   L + ++   +E SIP ED  LL+  + +  T  + + +M G S LL LLS  L
Sbjct: 229 TELPAGVLVSDYNVQLQENSIPSEDTQLLTSRRKENRTLDSSEQSMGGFSSLLMLLSPRL 288

Query: 104 LVSTLLLWVVFFGNAFSYYGLVLLTTELT-GTSRCTSTDIHLKEHEDVNYRDVFISSFAE 163
           L ST+LLW+ FFGNAF+YYGLVLLTTEL+ G ++C+    HLK+  D+NY DVF++SFAE
Sbjct: 289 LKSTMLLWIYFFGNAFAYYGLVLLTTELSNGRNKCSPYQSHLKKTSDINYGDVFVTSFAE 348

Query: 164 LPGLALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTV 223
            PGL +SA +VDKLGRKLSMSSM FL   FL PL  ++  GLTT+LLFGARIC+T++FT+
Sbjct: 349 FPGLLISAAIVDKLGRKLSMSSMLFLCCIFLLPLVVHQPAGLTTSLLFGARICITASFTI 408

Query: 224 VYIYAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSG 283
           +YIYAPE+YPTSIRTTGVGVASS+GRIGGMICPLVAVAL+KGCHQTA+IILFEIV F+SG
Sbjct: 409 IYIYAPEVYPTSIRTTGVGVASSIGRIGGMICPLVAVALIKGCHQTASIILFEIVIFVSG 468

Query: 284 ICVVLFPFETKGQDLPEKV 302
           IC VLFPFETKG+DL + +
Sbjct: 469 ICAVLFPFETKGRDLSDTI 487

[Close]

BLAST of Lsi05G002550 vs. NCBI nr
Match: gi|593267396|ref|XP_007135876.1| (hypothetical protein PHAVU_010G165500g [Phaseolus vulgaris])

HSP 1 Score: 314.3 bits (804), Expect = 2.3e-82
Identity = 161/256 (62.89%), Postives = 201/256 (78.52%), Query Frame = 1


Query: 46  VPTVSLFTSHSYDFEEQSIPVEDVHLLSLTQTKVETSQAIKSNMLGLSPLLKLLSRELLV 105
           +P+ +L + H  + ++   P ED HLLS T  ++E    + SN+ G+S L+ LLS +L  
Sbjct: 157 LPSGNLVSDHEIELQQIDNPSEDAHLLSTTTNEIEHPSGMDSNLGGISSLMMLLSPKLAR 216

Query: 106 STLLLWVVFFGNAFSYYGLVLLTTELTGTSRCTSTDIHLKEHEDVNYRDVFISSFAELPG 165
           ST+LLW VFFGNAFSYYGLVLLTTEL G S+C S  +  ++ +DV+Y+ VFI+SFAELPG
Sbjct: 217 STVLLWAVFFGNAFSYYGLVLLTTELNGHSKCMSHKLQTEKSQDVSYKSVFIASFAELPG 276

Query: 166 LALSAVMVDKLGRKLSMSSMFFLGATFLFPLAFYRVDGLTTALLFGARICVTSTFTVVYI 225
           L LSAV VDKLGRKLSMSSMFF+ + FL PL FY  +GLTT LLF ARIC+T+TFT+VYI
Sbjct: 277 LLLSAVAVDKLGRKLSMSSMFFMCSIFLLPLVFYLPEGLTTGLLFLARICITATFTIVYI 336

Query: 226 YAPEIYPTSIRTTGVGVASSVGRIGGMICPLVAVALVKGCHQTAAIILFEIVFFLSGICV 285
           YAPE+YPTS+RTTGVG+AS+VGRIGGMICPLVAV LV GCHQTAA++LFE++  LSGICV
Sbjct: 337 YAPEMYPTSVRTTGVGIASAVGRIGGMICPLVAVGLVHGCHQTAAVLLFEVIALLSGICV 396

Query: 286 VLFPFETKGQDLPEKV 302
           +  P ET GQ+L + V
Sbjct: 397 MFLPIETMGQELRDSV 412

The following BLAST results are available for this feature:

BLAST of Lsi05G002550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OCT7_ARATH	6.3e-72	59.76	Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana GN=OCT7 PE=2 SV=1	[more]
SVOP_MOUSE	8.3e-24	35.44	Synaptic vesicle 2-related protein OS=Mus musculus GN=Svop PE=1 SV=1	[more]
SVOP_BOVIN	1.4e-23	36.23	Synaptic vesicle 2-related protein OS=Bos taurus GN=SVOP PE=2 SV=1	[more]
SVOP_PONAB	2.4e-23	35.71	Synaptic vesicle 2-related protein OS=Pongo abelii GN=SVOP PE=2 SV=1	[more]
SVOP_HUMAN	2.4e-23	35.71	Synaptic vesicle 2-related protein OS=Homo sapiens GN=SVOP PE=2 SV=1	[more]

BLAST of Lsi05G002550 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6X7_CUCSA	6.4e-116	86.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G198470 PE=4 SV=1	[more]
A0A059AK14_EUCGR	7.2e-83	62.93	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J03196 PE=4 SV=1	[more]
V7AUH4_PHAVU	1.6e-82	62.89	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G165500g PE=4 SV=1	[more]
V7ARC2_PHAVU	1.6e-82	62.89	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_010G165500g PE=4 SV=1	[more]
A0A061G8P8_THECC	1.4e-81	63.32	Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_027633...	[more]

BLAST of Lsi05G002550 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G13050.1	3.5e-73	59.76	Major facilitator superfamily protein	[more]
AT3G20660.1	1.3e-06	27.43	organic cation/carnitine transporter4	[more]

BLAST of Lsi05G002550 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659112367\|ref\|XP_008456184.1\|	7.5e-118	87.60	PREDICTED: organic cation/carnitine transporter 7 [Cucumis melo]	[more]
gi\|449445929\|ref\|XP_004140724.1\|	9.2e-116	86.43	PREDICTED: organic cation/carnitine transporter 7 [Cucumis sativus]	[more]
gi\|764610471\|ref\|XP_011467508.1\|	4.6e-83	63.57	PREDICTED: organic cation/carnitine transporter 7 [Fragaria vesca subsp. vesca]	[more]
gi\|702484949\|ref\|XP_010034101.1\|	1.0e-82	62.93	PREDICTED: organic cation/carnitine transporter 7 [Eucalyptus grandis]	[more]
gi\|593267396\|ref\|XP_007135876.1\|	2.3e-82	62.89	hypothetical protein PHAVU_010G165500g [Phaseolus vulgaris]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0005215	transporter activity

Vocabulary: **INTERPRO**
Term	Definition
IPR020846	MFS_dom
IPR011701	MFS
IPR005829	Sugar_transporter_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006811	ion transport
biological_process	GO:0071705	nitrogen compound transport
biological_process	GO:0071702	organic substance transport
biological_process	GO:0044765	single-organism transport
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022891	substrate-specific transmembrane transporter activity
molecular_function	GO:0005215	transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G002550.1	Lsi05G002550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 169..184 scor
IPR011701	Major facilitator superfamily	PFAM	PF07690	MFS_1	coord: 157..293 score: 1.
IPR020846	Major facilitator superfamily domain	PROFILE	PS50850	MFS	coord: 1..293 score: 9
IPR020846	Major facilitator superfamily domain	unknown	SSF103473	MFS general substrate transporter	coord: 92..299 score: 4.84
None	No IPR available	GENE3D	G3DSA:1.20.1250.20		coord: 103..298 score: 8.1
None	No IPR available	PANTHER	PTHR24064	FAMILY NOT NAMED	coord: 148..301 score: 5.3E-99coord: 71..131 score: 5.3
None	No IPR available	PANTHER	PTHR24064:SF287	SUBFAMILY NOT NAMED	coord: 148..301 score: 5.3E-99coord: 71..131 score: 5.3

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G002550	Cucumber (Chinese Long) v3	cuclsiB230
Lsi05G002550	Watermelon (97103) v2	lsiwmbB329
Lsi05G002550	Wax gourd	lsiwgoB431
Lsi05G002550	Cucumber (Gy14) v1	cgylsiB144
Lsi05G002550	Cucurbita maxima (Rimu)	cmalsiB249
Lsi05G002550	Cucurbita maxima (Rimu)	cmalsiB440
Lsi05G002550	Cucurbita moschata (Rifu)	cmolsiB237
Lsi05G002550	Cucurbita moschata (Rifu)	cmolsiB430
Lsi05G002550	Cucurbita pepo (Zucchini)	cpelsiB470
Lsi05G002550	Cucurbita pepo (Zucchini)	cpelsiB511
Lsi05G002550	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G002550	Cucumber (Chinese Long) v2	culsiB211
Lsi05G002550	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G002550	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G002550	Watermelon (97103) v1	lsiwmB361
Lsi05G002550	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G002550	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G002550	Silver-seed gourd	carlsiB158
Lsi05G002550	Silver-seed gourd	carlsiB700