Lsi05G002450 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G002450
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 3193649 .. 3197397 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAAGGTGAAGAATTATTGCGGTGTGATATTAGCGAGTTAGCTAACTTAGATTACCCGCTCACTTGAATTCTTTCAGAAGAATGTATTTGCGGTTGATGTGGGCATACTTATTGAGGATGGTGTTATTAGAAGCTGCTGCCATGATGGATGATACTTCATCTCAATCATGCACAGAACTTTTGAGCTGACCTTTCTCGTGACTTCCCTAGAAAATCTGTGCTGTACTGTTAAGCTGGACATAAAGATACTAGAGGGTTCTTTAGGTTGATGACTTGATTGCACACTCCTCTGTTTATTGTTGGACCCCGAATATTGATTTGAAACTAATACAACCTTCTCCTCTTCATAGTGTAAATCTTATACAAATATTATCCATTTGTACTGCTTGATTATATCACGAAGGTTGATCCTTTCCTCACTCTGTTTTATTATTATATTAATATTTTCTTCGTATGTGCATAGGTATTCCCTTTCTTCCCCTCTAGGTTTTCCTGGATTAGGGAACTTTGGTTTTAAATTTTGTTGGATCTTGTAGCAGTCATTTTTAATTATGGCTGTGGTAGTCTATGTGACAATATATGAAAGAAACAAAGGCATTCATTAGAAATGAACTGTAGAGCAGAACATTTTCTGCTGTTGATATTTTTATGATGGACACTTTCAGAGCCGTGAAACATTTCATCATTGAACAAGCGTACCTTCATTACAAAGAACTCAAATAAAAATTGTAAGATGTCCGTGTGTTATCAAGTTCTTATGCTTTTCCCTTTTGTTTTACATTGCAGGTACTTGAGTGATCTCCAGTAGAAGCACACATGTGAGCAATACTATGTGGGGTGAAGTTGAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGTTTCTGGTAACTTTATTAGGTAGGTAGATGTAATAAAACAATTTCTAGCTGTTGAAGGAATTAATCCTTCCGTTTGCCTGTGGATTCCCTAGAATGATCAACTATTGATTATCTGACCTGGTTTGTTTCTTCTGGGCCTGAATTTTGTAATTTGCTACCTTCAATTACTCTCATACCGGATACTAGATTTACAATCACATTATGGAATTCTTCTTTCTATCAGCTTTCCAGTACCTTCAACTTGAGAATTATCGATCTGGACACAGGTCAACAGGAAGAAATAATAACCCATTCCTAGAAGATTAAGTTTCCAACACGAAAGTGTCGCACTTCATTAATATATGCCTTTTACACAAGGTTGTGTATTTTTATACATATTAATGCTTTCAACATGTGGACAACTAGGAATACACATATGTATTTTCATTTTCCATATATTCAATTTGTGAATGATTATATTTGTTCATAGGACATGAACTTTTGAAGCACCAATTAGAGTAAAGTATGTCACGATTTTGAATGGAATAGTTGTAATCACATATCCAATAATAGACACGAAGTAGAATCATGTAAGGTTTTAAATGCTTGTCTATATTCTAGCTTTCAAATGAGATTGGTGTTGAGTGGCTGTTGTAGCTCTTGCTCATATTTGAAATCCATGTTGTAGGTGGGAGCTTCAATAGCAACAGGCACATGGGATTGCCAAAGCTGATTTGATTGACACTAACATATCATGTTTTGTAAAGCCAGGTTTATGGTTTATGGTTTCATCTGGTCCACAATGCCAATGCATTTCATGGATGGCTTCTTGCAGGTGCATTTGGAAATCTCTGTTGATTTTTATGGCCCATAGCCTTAAGCCTAGCTGGTTTTATTGTTCCCTACAACTGAAATGGCCCTCCTGCTTCCCCTCATAAAATACTTGTTAGGAAACCCAAAAATATTACCCTGCAATTCAACAATGGGGACTTTCAAACCCCATCACTTATTCTTTCCCCCCATCCCCACAAGGAACTTGATTGGAAAATGATGAACAGGGTGAGGACGGAGATGGTCTATCGAGTCTCGATATCTGACCCCATCTAAGTTTTTAATGTTTGTTTGCAGCGATGCGTCTCAGAGAACACGAGGTGAGTTTGAAATAATTCTTTGATATTTCCTTTTATGAGCAACTAAACTTTTAGCTACTACATAAAAAACTAACTTTTTTGGGCAAAAAAGTAGGTAGATATTCTATTTCTTACTGAAAGAAAAGATGGAGAGAGATTTCAATTTAAAATTGTTGAACTCTCTCTCTCTCTTGCACAGATTGTACAATCTAATATACAGAAAAAGGACTGTTGTGAACCCCAGTTAGAAAGTAAGTGCACTTAACAAAGTAGAGAGAATCCACTTGACTTTCTTTTACTTTGTATGATCGTCATCTCCATGATTTATGAAGAACCTTTATTCCAAGCTTAGCTGCTACTGTCGTCATCAAATAGTAACTCACATTTTCCATCATATTTAATTGCACTTTTAACTAACAATATATGTAATTTAACATTCTCATATTAAAATAATACAATTGTGTTATTTGATTAGAGTGGTTATCAAGCTTTCTTTGAACTTAAACACTGATTTAACTTGGACTAAAGTAACCTAGATATCTTTTGTCCATTACAAGACAAACTAAAGCAAACTAATTAGTTGTATCCATTTGCTAATTTAATTAATATGAACAAGTGCTTGCAATTCAAAGGCCATTCAGAATGAATTTAGAGCATATTTTGTTCTGAACATGAGTGTCTTAAATTATATATGATATGACTGAAATGTTCATCACAGACATCTTTTTTCCCCCAAGGAGTTCGTGCCTCATGATACAACATTTTGAGGGAGAGTACCCATTTTGATGATTAACATACTTTATTATACCTTATGTTAATAAAGTAATGAAATATAGAGAAAATATCAATTTATATTTCCTAAACATTAGGGGTTATATCAATTTAAACCTTGAATTGATAATTGTATCAATTAAAACTTTAGACTTTTGTAAATGTGTGAATTTATATCCTCAATTACGTTTTCTTTGGAAGAATTTCGAGTGAAACTCATAATTGTAAATTGTATCAATTACTTTCGCAAACGAATCAATTTAGACTCTTAGTCATAATTTCCTTTGAAAATTGTCTATGCATTTACTCTAATTATCCATATTGTAAAACCAACATTTGAATAAGTTTTCACACTTTTAAGAATTAATTCATCGATGATTTTTAAAGGTAATGATCTAAATTGATTGGCTTACACGAAAGTAAGTTATTAGTTTAGAGTTTTAATTAATACAACTCCTAAAGTTTTAGGGTGTAAATTGGTATTTGCCCTATAATGTATTTTTTTGCCATAAATTCTTCGTCAAAATTTGGTCAAATTGATTCTTCCCTTCTACTTGTAACTTTCTCAAAAGATTTTTTTATTCATTTACATTTTTTTTGTACGATATTGTTTGCTTTCACAACTCCATGGATCTAAGATCTTCTTTGGGCAGTGTCTTAAGGTTTCACTTGTGAAGGTTTTCATAATCTATTCACCCACTATTTACAATTGCTTAAGAATATCTATACCAATATTTCAGCTTTAATCTATGAAAACTATCATCCATAGAGAACAACACACACGAATTCCAGATACTAAATAAAGCAAAGAACAAATCAAATAGAATTAAACAACATTACTAAATTCATGAAGGGTAAAGATTCAAATGTCTCCTTCCTTTCTCTTCTCTCCAGGAGACAGGGAGAGAGATCTTGTCTTAGCCTAAAGTTTTGCAGACAAGAGGACACGAATAAGTACTTCCAATTTCCTGTCCAAGTTAACAACTAA

mRNA sequence

ATGGAGAAGCTTTCCAGTACCTTCAACTTGAGAATTATCGATCTGGACACAGCGATGCGTCTCAGAGAACACGAGGGTAAAGATTCAAATGTCTCCTTCCTTTCTCTTCTCTCCAGGAGACAGGGAGAGAGATCTTGTCTTAGCCTAAAGTTTTGCAGACAAGAGGACACGAATAAGTACTTCCAATTTCCTGTCCAAGTTAACAACTAA

Coding sequence (CDS)

ATGGAGAAGCTTTCCAGTACCTTCAACTTGAGAATTATCGATCTGGACACAGCGATGCGTCTCAGAGAACACGAGGGTAAAGATTCAAATGTCTCCTTCCTTTCTCTTCTCTCCAGGAGACAGGGAGAGAGATCTTGTCTTAGCCTAAAGTTTTGCAGACAAGAGGACACGAATAAGTACTTCCAATTTCCTGTCCAAGTTAACAACTAA

Protein sequence

MEKLSSTFNLRIIDLDTAMRLREHEGKDSNVSFLSLLSRRQGERSCLSLKFCRQEDTNKYFQFPVQVNN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G002450.1Lsi05G002450.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G002450Bottle gourd (USVL1VR-Ls)lsilsiB080
Lsi05G002450Bottle gourd (USVL1VR-Ls)lsilsiB132
Lsi05G002450Cucumber (Gy14) v1cgylsiB144
Lsi05G002450Cucumber (Gy14) v1cgylsiB369
Lsi05G002450Cucurbita maxima (Rimu)cmalsiB316
Lsi05G002450Cucurbita maxima (Rimu)cmalsiB493
Lsi05G002450Cucurbita maxima (Rimu)cmalsiB690
Lsi05G002450Cucurbita moschata (Rifu)cmolsiB304
Lsi05G002450Cucurbita moschata (Rifu)cmolsiB478
Lsi05G002450Cucurbita moschata (Rifu)cmolsiB683
Lsi05G002450Cucurbita pepo (Zucchini)cpelsiB177
Lsi05G002450Cucurbita pepo (Zucchini)cpelsiB369
Lsi05G002450Wild cucumber (PI 183967)cpilsiB209
Lsi05G002450Wild cucumber (PI 183967)cpilsiB541
Lsi05G002450Cucumber (Chinese Long) v2culsiB211
Lsi05G002450Cucumber (Chinese Long) v2culsiB527
Lsi05G002450Melon (DHL92) v3.5.1lsimeB346
Lsi05G002450Melon (DHL92) v3.5.1lsimeB368
Lsi05G002450Melon (DHL92) v3.5.1lsimeB388
Lsi05G002450Watermelon (Charleston Gray)lsiwcgB330
Lsi05G002450Watermelon (Charleston Gray)lsiwcgB332
Lsi05G002450Watermelon (97103) v1lsiwmB361
Lsi05G002450Watermelon (97103) v1lsiwmB380
Lsi05G002450Cucumber (Gy14) v2cgyblsiB198
Lsi05G002450Melon (DHL92) v3.6.1lsimedB363
Lsi05G002450Melon (DHL92) v3.6.1lsimedB384
Lsi05G002450Melon (DHL92) v3.6.1lsimedB409
Lsi05G002450Silver-seed gourdcarlsiB270
Lsi05G002450Silver-seed gourdcarlsiB346
Lsi05G002450Cucumber (Chinese Long) v3cuclsiB230
Lsi05G002450Cucumber (Chinese Long) v3cuclsiB562
Lsi05G002450Watermelon (97103) v2lsiwmbB326
Lsi05G002450Watermelon (97103) v2lsiwmbB317
Lsi05G002450Watermelon (97103) v2lsiwmbB329
Lsi05G002450Wax gourdlsiwgoB431
Lsi05G002450Wax gourdlsiwgoB468