Lsi05G002180 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G002180
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 2952231 .. 2953826 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAGTGTTGGTAGCCACCCCCTCCCACAGATCTGGAATGCGCAACCTCCTTCCCTAGGTCTAGAACTGCGGCGGCGTTGGCGGCGACCTCCCTCTTTTCCCCCAAGTTTGAAACACCGGCAACCACCCCCCTCCTCCTCGCCCAAATCTGAAACGCCAGAATCCACAATTTCCTCCTCCTTGCGAACTTCCTGAATGCTGCCGGAAGACACATTCTTTTCCTTACCGGCAGACATCTCCTCCGTACTAAGAACTGGAATGTCGTCGGCAGCCATCTGTTTCTCCTTGCCGTGATCTGGAATGCCGTCAGCCACTGCAATGCTCTCTTTCTGAGGATCTGGAATGACGGCAACAACCTCCTCCTCCTTACCAACGTCGGGAGGCGTCTTTTCTTCTTCCTCTCGATGATTTGAGGCATCGACGGCTGTCTTTTCCCCACACAGAAAAAACCTAGGCAACCATCCTCTTGCGCAGATCTGGAATGGCCAACAAGTTCCCCCTTGAGCAGATTTGGAATGTCTTTCCTTATCGGCAGCAACCACCTCCTCCTCCGGCAGATCTGAAACACCGACAACCACTTTCTCTTCCCTGCCTGGATTTGGAACGTCGGACTCGACATTCCTCCTCCTCCGCCCGCAGATATGGAATGACGGCGCACATTTAAAACAACTGCAGCAGCCATTTGGAACGTCGGAATCGACATTCCTCCTCCTCCGCCCGCATATCTGGAATGTCGGCACACATTTAAAACAACTGCAGCAGCCACTCCTTTCTTTCTGCAAATCTGGAATGTCGACGTTTGAAGAATCGTCGGTAGCCACCGCCTCCTTCTTCTCGAATGTCTTTGGATTGTCGTCTACTCTTTTCCTCCCTGCGCAGATGTGGAATGCTCGTAAGCATCCTACTGAATCGCCCTCTTGGATAGTTACATCATCATTAGCCAGTTCTTCAACCTTTGGAACATCGACAATCACCTCTTCCTTGACGGCAACCAGTTTCCTCCTCCTGCAAATCTGAAACGCCGGCAGAAGTCCACATCCTCCACAACAGCAACCACTGCCCTCCTCCTTGCGCAGATCTGGATCGACGACGACGACTTCCTCTTCCTTCACCAAATCTGGACCATTAGTAGCCGCTACCTCCTGTTTCTGAAGATCCGAAGTGGCGACGACCGTGCTTCTTCTTCGCCCGCAGATCTGGAACGTTGGCCAACACCTGCAGCCACATCCGTCCTTATCGAGAACATCGCCGACAGCCACCACGGTGTCGTCCTCCCGCAGATTGGGAACGGCGGCAACAACCCCTGCATCTGAAGAAGCATTGGTAACCACCTTTCTCTTCCTTAGAGAGAGATGGAGTTTAAGTGCACACTCCCGGCGCGTAGATTTGGAAGTTTGCCAACAACAACAAGCTGCTCGCGCAGATATAGAATCATCGACAGACTGCACTCTGTCCTCCTTGGGAGGAACATCGGCGACAACTGCCGCAGCATGTTGTGAGGAATCTAGAACGACGACAGGGGTCTTTAGAAAAGGGCGATTGGCAGTAAGAAGATTAGATTTGGAATTGGCATCGTGGGTTGAAGATGAATGA

mRNA sequence

ATGTGTAGTCCACCCCCTCCCACAGATCTGGAATGCGCAACCTCCTTCCCTAGGTCTAGAACTGCGGCGGCGTTGGCGGCGACCTCCCTCTTTTCCCCCAAACATCTCCTCCGTACTAAGAACTGGAATGTCGTCGGCAGCCATCTGTTTCTCCTTGCCGTGATCTGGAATGCCGTCAGCCACTGCAATGCTCTCTTTCTGAGGATCTGGAATGACGGCAACAACCTCCTCCTCCTTACCAACGTCGGGAGGCCAACCACCTCCTCCTCCGGCAGATCTGAAACACCGACAACCACTTTCTCTTCCCTGCCTGGATTTGGAACGTCGGACTCGACATTCCTCCTCCTCCGCCCGCAGATATGGAATGACGGCGCACATTTAAAACAACTGCAGCAGCCATTTGGAACGTCGGAATCGACATTCCTCCTCCTCCGCCCGCATATCTGGAATGTCGGCACACATTTAAAACAACTGCAGCAGCCACTCCTTTCTTTCTGCAAATCTGGAATGTCGACGTTTGAAGAATCGTCGGTAGCCACCGCCTCCTTCTTCTCGAATGTCTTTGGATTGTCGTCTACTCTTTTCCTCCCTGCGCAGATGTGGAATGCTCGTAAGCATCCTACTGAATCGCCCTCTTGGATATTCTTCAACCTTTGGAACATCGACAATCACCTCTTCCTTGACGGCAACCAGTTTCCTCCTCCTGCAAATCTGAAACGCCGGCAGAAGTCCACATCCTCCACAACAGCAACCACTGCCCTCCTCCTTGCGCAGATCTGGATCGACGACGACGACTTCCTCTTCCTTCACCAAATCTGGACCATTAGTAGCCGCTACCTCCTATCCGAAGTGGCGACGACCGTGCTTCTTCTTCGCCCGCAGATCTGGAACGTTGGCCAACACCTGCAGCCACATCCGTCCTTATCGAGAACATCGCCGACAGCCACCACGGTGTCGTCCTCCCGCAGATTGGGAACGGCGGCAACAACCCCTGCATCTGAAGAAGCATTGGTAACCACCTTTCTCTTCCTTAGAGAGAGATGGAGTTTAAGTGCACACTCCCGGCGCGTAGATTTGGAAGTTTGCCAACAACAACAAGCTGCTCGCGCAGATATAGAATCATCGACAGACTGCACTCTGTCCTCCTTGGGAGGAACATCGGCGACAACTGCCGCAGCATGTTGTGAGGAATCTAGAACGACGACAGGGGTCTTTAGAAAAGGGCGATTGGCAGTAAGAAGATTAGATTTGGAATTGGCATCGTGGGTTGAAGATGAATGA

Coding sequence (CDS)

ATGTGTAGTCCACCCCCTCCCACAGATCTGGAATGCGCAACCTCCTTCCCTAGGTCTAGAACTGCGGCGGCGTTGGCGGCGACCTCCCTCTTTTCCCCCAAACATCTCCTCCGTACTAAGAACTGGAATGTCGTCGGCAGCCATCTGTTTCTCCTTGCCGTGATCTGGAATGCCGTCAGCCACTGCAATGCTCTCTTTCTGAGGATCTGGAATGACGGCAACAACCTCCTCCTCCTTACCAACGTCGGGAGGCCAACCACCTCCTCCTCCGGCAGATCTGAAACACCGACAACCACTTTCTCTTCCCTGCCTGGATTTGGAACGTCGGACTCGACATTCCTCCTCCTCCGCCCGCAGATATGGAATGACGGCGCACATTTAAAACAACTGCAGCAGCCATTTGGAACGTCGGAATCGACATTCCTCCTCCTCCGCCCGCATATCTGGAATGTCGGCACACATTTAAAACAACTGCAGCAGCCACTCCTTTCTTTCTGCAAATCTGGAATGTCGACGTTTGAAGAATCGTCGGTAGCCACCGCCTCCTTCTTCTCGAATGTCTTTGGATTGTCGTCTACTCTTTTCCTCCCTGCGCAGATGTGGAATGCTCGTAAGCATCCTACTGAATCGCCCTCTTGGATATTCTTCAACCTTTGGAACATCGACAATCACCTCTTCCTTGACGGCAACCAGTTTCCTCCTCCTGCAAATCTGAAACGCCGGCAGAAGTCCACATCCTCCACAACAGCAACCACTGCCCTCCTCCTTGCGCAGATCTGGATCGACGACGACGACTTCCTCTTCCTTCACCAAATCTGGACCATTAGTAGCCGCTACCTCCTATCCGAAGTGGCGACGACCGTGCTTCTTCTTCGCCCGCAGATCTGGAACGTTGGCCAACACCTGCAGCCACATCCGTCCTTATCGAGAACATCGCCGACAGCCACCACGGTGTCGTCCTCCCGCAGATTGGGAACGGCGGCAACAACCCCTGCATCTGAAGAAGCATTGGTAACCACCTTTCTCTTCCTTAGAGAGAGATGGAGTTTAAGTGCACACTCCCGGCGCGTAGATTTGGAAGTTTGCCAACAACAACAAGCTGCTCGCGCAGATATAGAATCATCGACAGACTGCACTCTGTCCTCCTTGGGAGGAACATCGGCGACAACTGCCGCAGCATGTTGTGAGGAATCTAGAACGACGACAGGGGTCTTTAGAAAAGGGCGATTGGCAGTAAGAAGATTAGATTTGGAATTGGCATCGTGGGTTGAAGATGAATGA

Protein sequence

MCSPPPPTDLECATSFPRSRTAAALAATSLFSPKHLLRTKNWNVVGSHLFLLAVIWNAVSHCNALFLRIWNDGNNLLLLTNVGRPTTSSSGRSETPTTTFSSLPGFGTSDSTFLLLRPQIWNDGAHLKQLQQPFGTSESTFLLLRPHIWNVGTHLKQLQQPLLSFCKSGMSTFEESSVATASFFSNVFGLSSTLFLPAQMWNARKHPTESPSWIFFNLWNIDNHLFLDGNQFPPPANLKRRQKSTSSTTATTALLLAQIWIDDDDFLFLHQIWTISSRYLLSEVATTVLLLRPQIWNVGQHLQPHPSLSRTSPTATTVSSSRRLGTAATTPASEEALVTTFLFLRERWSLSAHSRRVDLEVCQQQQAARADIESSTDCTLSSLGGTSATTAAACCEESRTTTGVFRKGRLAVRRLDLELASWVEDE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G002180.1Lsi05G002180.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G002180Bottle gourd (USVL1VR-Ls)lsilsiB080
Lsi05G002180Bottle gourd (USVL1VR-Ls)lsilsiB132
Lsi05G002180Cucumber (Gy14) v1cgylsiB369
Lsi05G002180Cucumber (Gy14) v1cgylsiB404
Lsi05G002180Cucurbita maxima (Rimu)cmalsiB127
Lsi05G002180Cucurbita maxima (Rimu)cmalsiB316
Lsi05G002180Cucurbita maxima (Rimu)cmalsiB493
Lsi05G002180Cucurbita maxima (Rimu)cmalsiB690
Lsi05G002180Cucurbita moschata (Rifu)cmolsiB116
Lsi05G002180Cucurbita moschata (Rifu)cmolsiB304
Lsi05G002180Cucurbita moschata (Rifu)cmolsiB478
Lsi05G002180Cucurbita moschata (Rifu)cmolsiB683
Lsi05G002180Cucurbita pepo (Zucchini)cpelsiB177
Lsi05G002180Cucurbita pepo (Zucchini)cpelsiB369
Lsi05G002180Wild cucumber (PI 183967)cpilsiB209
Lsi05G002180Wild cucumber (PI 183967)cpilsiB541
Lsi05G002180Cucumber (Chinese Long) v2culsiB211
Lsi05G002180Cucumber (Chinese Long) v2culsiB527
Lsi05G002180Melon (DHL92) v3.5.1lsimeB346
Lsi05G002180Melon (DHL92) v3.5.1lsimeB368
Lsi05G002180Melon (DHL92) v3.5.1lsimeB388
Lsi05G002180Watermelon (Charleston Gray)lsiwcgB330
Lsi05G002180Watermelon (Charleston Gray)lsiwcgB332
Lsi05G002180Watermelon (97103) v1lsiwmB361
Lsi05G002180Watermelon (97103) v1lsiwmB380
Lsi05G002180Cucumber (Gy14) v2cgyblsiB198
Lsi05G002180Cucumber (Gy14) v2cgyblsiB496
Lsi05G002180Melon (DHL92) v3.6.1lsimedB363
Lsi05G002180Melon (DHL92) v3.6.1lsimedB384
Lsi05G002180Melon (DHL92) v3.6.1lsimedB409
Lsi05G002180Silver-seed gourdcarlsiB346
Lsi05G002180Silver-seed gourdcarlsiB737
Lsi05G002180Cucumber (Chinese Long) v3cuclsiB230
Lsi05G002180Cucumber (Chinese Long) v3cuclsiB562
Lsi05G002180Watermelon (97103) v2lsiwmbB326
Lsi05G002180Watermelon (97103) v2lsiwmbB317
Lsi05G002180Watermelon (97103) v2lsiwmbB329
Lsi05G002180Wax gourdlsiwgoB431
Lsi05G002180Wax gourdlsiwgoB468