Lsi05G001930 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi05G001930
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Basic blue protein
Location	chr05 : 2700134 .. 2702217 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAACTCTTTTAAAGTCTTTAGTGTCCTTTGTTATATTTTTGTTTGTTTGAAGTTTGAGAAATTTAGAAGAACAATAATAATGGGTGAGGGAAGAGGCAGTGCTGTGGTGGGTGTTGTGATGGTTTGTGTGTTGATGCTCCAATACTCTCAGATGGTTCATGCTGCTGTTTATACTGTTGGAGGTGCCCAAGGCTGGACCTTTAATGTTGCCTCCTGGCCCAAGGGAAAGCGTTTTCGCGCTGGCGATACACTCGGTAATTTTAATATTTTTAAGCATTTGAAAAGTCATTTCAAATAGTGTTTAATATAGTGTGTTTATATGCTTGGTTGCATTTTCGGTAGACGTGATTTTACTTAGAAACGTTTTTTTCTTTCTAAATGTTGTACTATAGAAATGATGAAGAAAATTACCTTTTTGGTCCCTTAGGAGTTTTTTCTAATTAGTCATTTTGGTTCTTGAGTTTTTTAAATGTAATTTTTTAGTCTCTGAATTTTGTAAAAGAAAAATATTTAAGTGCTGGTTTATGTGGCAAATATATATATATATATATATATATATATATATATATATATATATATATATATATATTTTTAAAAAAAATGAATTATTTAGGCCTGGATTGGTAACCATTTTGTTTGTTTGGGTTTTAGTTTTTTTTTTTTTGAAAAATTAAGCTTATTTCCTCTTAATTTCTTACAATGATTTACATCTTACTTAAATTCCAGAGTTATATTCTTGGGAAATTTTTAAAAATAGAAAAATAAGGGAAACTATTTACACAAAATAACAAAAATATTTTATAGTTGTGATAGACGCTGATAAAAGTCTATCAAGGTCTATCAGTGATGAAAATGATAGAAGTCTATCACTGATAGATGTTGATAGAAGTCTATCAATGTCTATCAGTGTCTTTTTTTGCTATTTTCTGTAAACAGTTTGACATTTTTTCTATCCGTGAAAATTTCTCTATATTCTTAGCTAAATTTCAGAAACAAAAACAAGTTCTTAATTTTTTTTTAAAAAAAAAATTAATTTTTTAAAACATTAATTGATAAAAAGTATATAAAAAAACAAGAAATTTAGAGGTGGAAGGAGTGTTTATAAGTTTAATTTTCAAAAACAAAAAACTAAGACTCAAATGGTTACCAAACGAAACTTTTTTTTTTTTTTTTACCATATATCAAAAAGGGTTGCATAGAATATAAGTGCATCATTTTGCCCTTTGTAAAATAGGTTTAAAAGATACTTCTACGTCTTGAAAAATGAAAATTCTTTTCTCTCTCGCTTCTATATGTTCACACAACATATCTGAGGGGTTAAAAAAAGTCCTATTTCCAATGATAAAATAATTAAAGAAATAATCATTTCACAAACAAAACAAAAGATCTCGAATCTTATTCTACGTAGAGAAAAATAATGAAACTATATAAGAAGAATTTGAACATAGAAACTCATGCTCTATATAAGACATGACTAAATCAACCCATATTAAATTACTGCGAAACCCAAAAACTTAATTAAATCAGTAAATTAGAGAAAAAAAATTATAATAATCATTATTGGACATTGAATAATTTTCTTTTTTCTTATAAGAAATGATTATTTGGTTTGTACAGTATTCAACTACAGCCCTTCAGCACACAATGTGGTGGCAGTCAACAGAGTGGGTTACAGTAAATGCATAACTCCAAGAGGTTCCAAAGTTTTTCTTACAGGAAAAGATCAAATCAAGCTTGTGAAGGGACAAAATTTCTTCATTTGCAATATCCCTGGCCACTGCCAAAGTGGAATGAAGATTGCCATTACTGCAATTTAAAATAACCCCTTTATATTATTTACCATCTTGCTACAAGAGAGTAGTCTATTTTTTAGATCAAATTTTCATTATGATTAAGTTAACTAATTGCTTAATCATATTAAGTTTGATGTATGATTTAGACACTCATGGAATAATAATGAGTTTAAGAAAAATATTTTAGTCTTTTTCTAGTTTAAAGTGTGTTAATTTGGGTATGAATTTTCGTGTGTGAAGATGCTTTTGCTTGATATGTACCGTATGGAATAAAATTAATTGCATCAATT

mRNA sequence

CTAACTCTTTTAAAGTCTTTAGTGTCCTTTGTTATATTTTTGTTTGTTTGAAGTTTGAGAAATTTAGAAGAACAATAATAATGGGTGAGGGAAGAGGCAGTGCTGTGGTGGGTGTTGTGATGGTTTGTGTGTTGATGCTCCAATACTCTCAGATGGTTCATGCTGCTGTTTATACTGTTGGAGGTGCCCAAGGCTGGACCTTTAATGTTGCCTCCTGGCCCAAGGGAAAGCGTTTTCGCGCTGGCGATACACTCGTATTCAACTACAGCCCTTCAGCACACAATGTGGTGGCAGTCAACAGAGTGGGTTACAGTAAATGCATAACTCCAAGAGGTTCCAAAGTTTTTCTTACAGGAAAAGATCAAATCAAGCTTGTGAAGGGACAAAATTTCTTCATTTGCAATATCCCTGGCCACTGCCAAAGTGGAATGAAGATTGCCATTACTGCAATTTAAAATAACCCCTTTATATTATTTACCATCTTGCTACAAGAGAGTAGTCTATTTTTTAGATCAAATTTTCATTATGATTAAGTTAACTAATTGCTTAATCATATTAAGTTTGATGTATGATTTAGACACTCATGGAATAATAATGAGTTTAAGAAAAATATTTTAGTCTTTTTCTAGTTTAAAGTGTGTTAATTTGGGTATGAATTTTCGTGTGTGAAGATGCTTTTGCTTGATATGTACCGTATGGAATAAAATTAATTGCATCAATT

Coding sequence (CDS)

ATGGGTGAGGGAAGAGGCAGTGCTGTGGTGGGTGTTGTGATGGTTTGTGTGTTGATGCTCCAATACTCTCAGATGGTTCATGCTGCTGTTTATACTGTTGGAGGTGCCCAAGGCTGGACCTTTAATGTTGCCTCCTGGCCCAAGGGAAAGCGTTTTCGCGCTGGCGATACACTCGTATTCAACTACAGCCCTTCAGCACACAATGTGGTGGCAGTCAACAGAGTGGGTTACAGTAAATGCATAACTCCAAGAGGTTCCAAAGTTTTTCTTACAGGAAAAGATCAAATCAAGCTTGTGAAGGGACAAAATTTCTTCATTTGCAATATCCCTGGCCACTGCCAAAGTGGAATGAAGATTGCCATTACTGCAATTTAA

Protein sequence

MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKIAITAI

Homology

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BLAST of Lsi05G001930 vs. Swiss-Prot
Match: BABL_CUCSA (Basic blue protein OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-37
Identity = 67/96 (69.79%), Postives = 80/96 (83.33%), Query Frame = 1


Query: 29  AVYTVGGAQGWTFNVASWPKGKRFRAGDTLVFNYSPSAHNVVAVNRVGYSKCITPRGSKV 88
           AVY VGG+ GWTFN  SWPKGKRFRAGD L+FNY+P  HNVV VN+ G+S C TP G+KV
Sbjct: 1   AVYVVGGSGGWTFNTESWPKGKRFRAGDILLFNYNPXMHNVVVVNQGGFSTCNTPAGAKV 60

Query: 89  FLTGKDQIKLVKGQNFFICNIPGHCQSGMKIAITAI 125
           + +G+DQIKL KGQ++FICN PGHCQSGMKIA+ A+
Sbjct: 61  YTSGRDQIKLPKGQSYFICNFPGHCQSGMKIAVNAL 96

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BLAST of Lsi05G001930 vs. Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 150.6 bits (379), Expect = 1.1e-35
Identity = 74/130 (56.92%), Postives = 91/130 (70.00%), Query Frame = 1


Query: 1   MGEGRGSA------VVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRA 60
           M +GRGSA      +V ++ V VL+LQ +  V AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQ-ADYVQAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFICN P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 SGMKIAITAI 125
           S MKIA+TA+
Sbjct: 121 SDMKIAVTAV 129

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BLAST of Lsi05G001930 vs. Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 9.9e-32
Identity = 65/127 (51.18%), Postives = 86/127 (67.72%), Query Frame = 1


Query: 1   MGEGRGSA----VVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGD 60
           M +G GSA    V+GVV+V ++     ++  + VYTVG   GWTF  + WP GK FRAGD
Sbjct: 1   MAQGSGSAERALVLGVVLVFLVF--NCEVAESVVYTVGDGGGWTFGTSGWPAGKTFRAGD 60

Query: 61  TLVFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSG 120
            LVF Y+P+ HNVV+V   GY  C    GS+VF +G D+I L +G N+FIC++PGHCQ G
Sbjct: 61  VLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLSRGTNYFICSVPGHCQGG 120

Query: 121 MKIAITA 124
           +KIA+TA
Sbjct: 121 LKIAVTA 125

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BLAST of Lsi05G001930 vs. Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-15
Identity = 40/97 (41.24%), Postives = 51/97 (52.58%), Query Frame = 1


Query: 28  AAVYTVGGAQGWTF--NVASWPKGKRFRAGDTLVFNYSPSAHNVVAVNRVGYSKCITPRG 87
           A VYTVG   GW    + ++W   K F  GD+LVFNY   AH V  V    Y  C +   
Sbjct: 24  ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNS 83

Query: 88  SKVFLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAI 122
                TG   I L K G+++FIC +PGH   GMK++I
Sbjct: 84  ISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSI 120

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BLAST of Lsi05G001930 vs. Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 6.5e-15
Identity = 37/99 (37.37%), Postives = 57/99 (57.58%), Query Frame = 1


Query: 28  AAVYTVGGAQGWT----FNVASWPKGKRFRAGDTLVFNYSPSAHNVVAVNRVGYSKCITP 87
           A V+ VG + GWT    ++ A W    +F  GD+L+FNY+   HNV+ V++  +  C + 
Sbjct: 1   ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSS 60

Query: 88  RGSKVFLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAI 122
             +  + +G D I L + G  +F+C IPGHCQ G K+ I
Sbjct: 61  SPAASYTSGADSIPLKRPGTFYFLCGIPGHCQLGQKVEI 99

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BLAST of Lsi05G001930 vs. TrEMBL
Match: A0A0A0LC13_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.5e-58
Identity = 112/125 (89.60%), Postives = 117/125 (93.60%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVL-MLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60
           MGEGRGSA+V VVMVC+L MLQYS M HAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKI 120
           FNYSPSAHNVV VNR+GYS+CITPRGSKVF TGKDQIKLVKGQNFFICNIPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMKI 120

Query: 121 AITAI 125
           A+ AI
Sbjct: 121 AVNAI 125

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BLAST of Lsi05G001930 vs. TrEMBL
Match: D7T037_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01140 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 1.4e-45
Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVF 60
           M  GRGSAVV +V+V  L+L    MV AA +TVGGA GW FN   WPKGKRF+AGD LVF
Sbjct: 1   MAVGRGSAVVAIVLVLCLVLP-CDMVDAATFTVGGASGWAFNAVGWPKGKRFKAGDVLVF 60

Query: 61  NYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKIA 120
           NYSPSAHNVVAVN+ GY+ C TPRGSKV+ TGKDQIKLVKG N+F+CN PGHCQSGMKIA
Sbjct: 61  NYSPSAHNVVAVNKAGYNGCTTPRGSKVYQTGKDQIKLVKGANYFLCNFPGHCQSGMKIA 120

Query: 121 ITA 124
           +TA
Sbjct: 121 VTA 122

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BLAST of Lsi05G001930 vs. TrEMBL
Match: W9SBG7_9ROSA (Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.6e-44
Identity = 86/124 (69.35%), Postives = 102/124 (82.26%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVF 60
           MG+GR SA+V   ++ +L+L  +++  AA YTVGGA GWTFNVA WPKGKRFRAGDTLVF
Sbjct: 1   MGQGRVSAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTLVF 60

Query: 61  NYSPSAHNVVAVNRVGYSKCIT-PRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKI 120
           NY   AHNVVAVN+ GY  C T P+G+KV+ +GKDQIKLVKGQNFFICN PGHC+SGMKI
Sbjct: 61  NYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGMKI 120

Query: 121 AITA 124
           A+TA
Sbjct: 121 AVTA 124

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BLAST of Lsi05G001930 vs. TrEMBL
Match: V7CQP8_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G250700g PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 4.6e-44
Identity = 87/123 (70.73%), Postives = 100/123 (81.30%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVF 60
           MG GRGSAVV ++ +C L+L +SQM HAA YTVGG+ GWTFN   WP GKRFRAGDTLVF
Sbjct: 1   MGLGRGSAVVLLISLCFLVL-HSQMAHAATYTVGGSGGWTFNTVGWPNGKRFRAGDTLVF 60

Query: 61  NYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKIA 120
            YS  AHNVVAVN+VGY  C TPRG++V+ +G DQIKLVKGQN+FICN  GHC+SGMKIA
Sbjct: 61  KYSSGAHNVVAVNKVGYGSCKTPRGARVYQSGNDQIKLVKGQNYFICNYVGHCESGMKIA 120

Query: 121 ITA 124
           I A
Sbjct: 121 INA 122

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BLAST of Lsi05G001930 vs. TrEMBL
Match: M5Y261_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 6.0e-44
Identity = 91/125 (72.80%), Postives = 100/125 (80.00%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMV-CV-LMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTL 60
           MG+GRGSA VGVV+V C+ L+L   +   A  YTVG A GWTFNVA WPKGK FRAGD L
Sbjct: 1   MGQGRGSAGVGVVLVMCLSLLLLQCEWAEARSYTVGDAGGWTFNVAGWPKGKSFRAGDVL 60

Query: 61  VFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMK 120
           VFNY+ SAHNVVAVN+ GY  C +PR +KVF TGKDQIKL KGQNFFICN PGHCQSGMK
Sbjct: 61  VFNYASSAHNVVAVNKAGYQTCSSPRAAKVFQTGKDQIKLAKGQNFFICNFPGHCQSGMK 120

Query: 121 IAITA 124
           IAITA
Sbjct: 121 IAITA 125

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BLAST of Lsi05G001930 vs. TAIR10
Match: AT2G02850.1 (AT2G02850.1 plantacyanin)

HSP 1 Score: 150.6 bits (379), Expect = 6.4e-37
Identity = 74/130 (56.92%), Postives = 91/130 (70.00%), Query Frame = 1


Query: 1   MGEGRGSA------VVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRA 60
           M +GRGSA      +V ++ V VL+LQ +  V AA YTVG +  WTFN   WPKGK FRA
Sbjct: 1   MAKGRGSASWSARAIVTLMAVSVLLLQ-ADYVQAATYTVGDSGIWTFNAVGWPKGKHFRA 60

Query: 61  GDTLVFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQ 120
           GD LVFNY+P  HNVV V+   Y+ C TP G+K + +GKD+I L KGQNFFICN P HC+
Sbjct: 61  GDVLVFNYNPRMHNVVKVDSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCE 120

Query: 121 SGMKIAITAI 125
           S MKIA+TA+
Sbjct: 121 SDMKIAVTAV 129

[Close]

BLAST of Lsi05G001930 vs. TAIR10
Match: AT3G60270.1 (AT3G60270.1 Cupredoxin superfamily protein)

HSP 1 Score: 85.5 bits (210), Expect = 2.5e-17
Identity = 47/120 (39.17%), Postives = 62/120 (51.67%), Query Frame = 1


Query: 8   AVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNV--ASWPKGKRFRAGDTLVFNYSPS 67
           +     ++ +L+L     V A  + VG   GWT  V   SW   K FR GDTL F Y PS
Sbjct: 3   STAATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGPS 62

Query: 68  AHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAITAI 125
            H+V  VN+  Y  C T R ++ F  G  +I L K G   F+C  PGHC  GMK+A+  +
Sbjct: 63  -HSVAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVL 121

[Close]

BLAST of Lsi05G001930 vs. TAIR10
Match: AT2G32300.1 (AT2G32300.1 uclacyanin 1)

HSP 1 Score: 80.1 bits (196), Expect = 1.1e-15
Identity = 37/116 (31.90%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 12  VVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVA--SWPKGKRFRAGDTLVFNYSPSAHNV 71
           ++++ VL      +  A  +T+GG  GWT   +  +W  G+ F  GD LVF+Y  + H+V
Sbjct: 7   LIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDV 66

Query: 72  VAVNRVGYSKCITPRGSKVFLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAITAI 125
           V V +  +  C   +    F  G   + L   G+ +FIC +PGHC  GMK+ +  +
Sbjct: 67  VEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV 122

[Close]

BLAST of Lsi05G001930 vs. TAIR10
Match: AT3G17675.1 (AT3G17675.1 Cupredoxin superfamily protein)

HSP 1 Score: 78.6 bits (192), Expect = 3.1e-15
Identity = 36/94 (38.30%), Postives = 52/94 (55.32%), Query Frame = 1


Query: 31  YTVGGAQGWTF--NVASWPKGKRFRAGDTLVFNYSPSAHNVVAVNRVGYSKCITPRGSKV 90
           + VG + GW    N  +W +G+ F  GD LVFNY    HNV+ VN   Y+ C     + +
Sbjct: 9   HIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCGLDNYTTL 68

Query: 91  FLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAI 122
           F  G D I L + G+ +FIC +  HC +G K++I
Sbjct: 69  FTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSI 102

[Close]

BLAST of Lsi05G001930 vs. TAIR10
Match: AT3G60280.1 (AT3G60280.1 uclacyanin 3)

HSP 1 Score: 75.9 bits (185), Expect = 2.0e-14
Identity = 44/116 (37.93%), Postives = 60/116 (51.72%), Query Frame = 1


Query: 12  VVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNV--ASWPKGKRFRAGDTLVFNYSPSAHNV 71
           V    +L L     V AA + VG   GWT N+    W  GK FR GDTL F Y  S H+V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS-HSV 64

Query: 72  VAVNRVGYSKCITPRGSKVFLTGKDQIKLVK-GQNFFICNIPGHCQSGMKIAITAI 125
             V++ GY  C +   ++ F  G  +I L   G   F+C   GHC++GMK+A+  +
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVL 119

[Close]

BLAST of Lsi05G001930 vs. NCBI nr
Match: gi|449464494|ref|XP_004149964.1| (PREDICTED: basic blue protein-like [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 2.1e-58
Identity = 112/125 (89.60%), Postives = 117/125 (93.60%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVL-MLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60
           MGEGRGSA+V VVMVC+L MLQYS M HAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCMLLMLQYSHMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKI 120
           FNYSPSAHNVV VNR+GYS+CITPRGSKVF TGKDQIKLVKGQNFFICNIPGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCITPRGSKVFQTGKDQIKLVKGQNFFICNIPGHCQGGMKI 120

Query: 121 AITAI 125
           A+ AI
Sbjct: 121 AVNAI 125

[Close]

BLAST of Lsi05G001930 vs. NCBI nr
Match: gi|659131262|ref|XP_008465594.1| (PREDICTED: basic blue protein-like [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 6.2e-58
Identity = 111/125 (88.80%), Postives = 117/125 (93.60%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVL-MLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60
           MGEGRGSA+V VVMVCVL MLQYSQM HAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV
Sbjct: 1   MGEGRGSAMVCVVMVCVLLMLQYSQMAHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLV 60

Query: 61  FNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKI 120
           FNYSPSAHNVV VNR+GYS+C TPRGSKVF TGKDQIKLVKGQNFFIC++PGHCQ GMKI
Sbjct: 61  FNYSPSAHNVVGVNRLGYSRCTTPRGSKVFQTGKDQIKLVKGQNFFICSLPGHCQGGMKI 120

Query: 121 AITAI 125
           A+ AI
Sbjct: 121 AVNAI 125

[Close]

BLAST of Lsi05G001930 vs. NCBI nr
Match: gi|225448071|ref|XP_002275987.1| (PREDICTED: basic blue protein [Vitis vinifera])

HSP 1 Score: 190.3 bits (482), Expect = 2.1e-45
Identity = 89/123 (72.36%), Postives = 100/123 (81.30%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVF 60
           M  GRGSAVV +V+V  L+L    MV AA +TVGGA GW FN   WPKGKRF+AGD LVF
Sbjct: 1   MAVGRGSAVVAIVLVLCLVLP-CDMVDAATFTVGGASGWAFNAVGWPKGKRFKAGDVLVF 60

Query: 61  NYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKIA 120
           NYSPSAHNVVAVN+ GY+ C TPRGSKV+ TGKDQIKLVKG N+F+CN PGHCQSGMKIA
Sbjct: 61  NYSPSAHNVVAVNKAGYNGCTTPRGSKVYQTGKDQIKLVKGANYFLCNFPGHCQSGMKIA 120

Query: 121 ITA 124
           +TA
Sbjct: 121 VTA 122

[Close]

BLAST of Lsi05G001930 vs. NCBI nr
Match: gi|703127617|ref|XP_010103882.1| (Basic blue protein [Morus notabilis])

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-44
Identity = 86/124 (69.35%), Postives = 102/124 (82.26%), Query Frame = 1


Query: 1   MGEGRGSAVVGVVMVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTLVF 60
           MG+GR SA+V   ++ +L+L  +++  AA YTVGGA GWTFNVA WPKGKRFRAGDTLVF
Sbjct: 1   MGQGRVSAMVAAALLLLLVLSQTELARAATYTVGGAGGWTFNVAGWPKGKRFRAGDTLVF 60

Query: 61  NYSPSAHNVVAVNRVGYSKCIT-PRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMKI 120
           NY   AHNVVAVN+ GY  C T P+G+KV+ +GKDQIKLVKGQNFFICN PGHC+SGMKI
Sbjct: 61  NYGRGAHNVVAVNKAGYQTCRTVPKGAKVYTSGKDQIKLVKGQNFFICNFPGHCESGMKI 120

Query: 121 AITA 124
           A+TA
Sbjct: 121 AVTA 124

[Close]

BLAST of Lsi05G001930 vs. NCBI nr
Match: gi|747081017|ref|XP_011087777.1| (PREDICTED: basic blue protein-like [Sesamum indicum])

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-44
Identity = 89/126 (70.63%), Postives = 105/126 (83.33%), Query Frame = 1


Query: 1   MGEGRGSA-VVGVV-MVCVLMLQYSQMVHAAVYTVGGAQGWTFNVASWPKGKRFRAGDTL 60
           M  GRGSA VVGVV MV + +  + ++  AA YTVGGA GWTFNVA+WP GKRF+AGDTL
Sbjct: 1   MSGGRGSALVVGVVVMVALAVAFHCEVAEAATYTVGGAGGWTFNVATWPTGKRFKAGDTL 60

Query: 61  VFNYSPSAHNVVAVNRVGYSKCITPRGSKVFLTGKDQIKLVKGQNFFICNIPGHCQSGMK 120
           VFNYSP+AHNVVAVN+ GY  C +PRG+K++ TGKDQIKL KGQNFFICN PGHCQ+GMK
Sbjct: 61  VFNYSPTAHNVVAVNKGGYQGCASPRGAKLYTTGKDQIKLAKGQNFFICNFPGHCQAGMK 120

Query: 121 IAITAI 125
           IA+TA+
Sbjct: 121 IAVTAV 126

The following BLAST results are available for this feature:

BLAST of Lsi05G001930 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BABL_CUCSA	2.1e-37	69.79	Basic blue protein OS=Cucumis sativus PE=1 SV=1	[more]
BABL_ARATH	1.1e-35	56.92	Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2	[more]
BABL_LILLO	9.9e-32	51.18	Chemocyanin OS=Lilium longiflorum PE=1 SV=1	[more]
BCP_PEA	6.5e-15	41.24	Blue copper protein OS=Pisum sativum PE=2 SV=1	[more]
MAVI_CUCPE	6.5e-15	37.37	Mavicyanin OS=Cucurbita pepo PE=1 SV=1	[more]

BLAST of Lsi05G001930 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC13_CUCSA	1.5e-58	89.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G215590 PE=4 SV=1	[more]
D7T037_VITVI	1.4e-45	72.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0034g01140 PE=4 SV=...	[more]
W9SBG7_9ROSA	1.6e-44	69.35	Basic blue protein OS=Morus notabilis GN=L484_024185 PE=4 SV=1	[more]
V7CQP8_PHAVU	4.6e-44	70.73	Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_002G250700g PE=4 SV=1	[more]
M5Y261_PRUPE	6.0e-44	72.80	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa021383mg PE=4 SV=1	[more]

BLAST of Lsi05G001930 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02850.1	6.4e-37	56.92	plantacyanin	[more]
AT3G60270.1	2.5e-17	39.17	Cupredoxin superfamily protein	[more]
AT2G32300.1	1.1e-15	31.90	uclacyanin 1	[more]
AT3G17675.1	3.1e-15	38.30	Cupredoxin superfamily protein	[more]
AT3G60280.1	2.0e-14	37.93	uclacyanin 3	[more]

BLAST of Lsi05G001930 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449464494\|ref\|XP_004149964.1\|	2.1e-58	89.60	PREDICTED: basic blue protein-like [Cucumis sativus]	[more]
gi\|659131262\|ref\|XP_008465594.1\|	6.2e-58	88.80	PREDICTED: basic blue protein-like [Cucumis melo]	[more]
gi\|225448071\|ref\|XP_002275987.1\|	2.1e-45	72.36	PREDICTED: basic blue protein [Vitis vinifera]	[more]
gi\|703127617\|ref\|XP_010103882.1\|	2.3e-44	69.35	Basic blue protein [Morus notabilis]	[more]
gi\|747081017\|ref\|XP_011087777.1\|	2.3e-44	70.63	PREDICTED: basic blue protein-like [Sesamum indicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR008972	Cupredoxin
IPR003245	Phytocyanin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0046658	anchored component of plasma membrane
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi05G001930.1	Lsi05G001930.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 59..123 score: 7.0
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 39..117 score: 2.4
IPR003245	Phytocyanin domain	PROFILE	PS51485	PHYTOCYANIN	coord: 29..124 score: 35
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 27..123 score: 2.6
IPR008972	Cupredoxin	unknown	SSF49503	Cupredoxins	coord: 29..123 score: 5.71
None	No IPR available	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 2..124 score: 8.2
None	No IPR available	PANTHER	PTHR33021:SF61	SUBFAMILY NOT NAMED	coord: 2..124 score: 8.2

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi05G001930	Wax gourd	lsiwgoB431
Lsi05G001930	Cucurbita maxima (Rimu)	cmalsiB316
Lsi05G001930	Cucurbita maxima (Rimu)	cmalsiB690
Lsi05G001930	Cucurbita moschata (Rifu)	cmolsiB304
Lsi05G001930	Cucurbita moschata (Rifu)	cmolsiB683
Lsi05G001930	Cucurbita pepo (Zucchini)	cpelsiB177
Lsi05G001930	Cucurbita pepo (Zucchini)	cpelsiB369
Lsi05G001930	Wild cucumber (PI 183967)	cpilsiB202
Lsi05G001930	Wild cucumber (PI 183967)	cpilsiB209
Lsi05G001930	Cucumber (Chinese Long) v2	culsiB202
Lsi05G001930	Cucumber (Chinese Long) v2	culsiB211
Lsi05G001930	Melon (DHL92) v3.5.1	lsimeB368
Lsi05G001930	Watermelon (Charleston Gray)	lsiwcgB332
Lsi05G001930	Watermelon (97103) v1	lsiwmB361
Lsi05G001930	Cucumber (Gy14) v2	cgyblsiB189
Lsi05G001930	Cucumber (Gy14) v2	cgyblsiB198
Lsi05G001930	Melon (DHL92) v3.6.1	lsimedB384
Lsi05G001930	Silver-seed gourd	carlsiB346
Lsi05G001930	Silver-seed gourd	carlsiB595
Lsi05G001930	Cucumber (Chinese Long) v3	cuclsiB224
Lsi05G001930	Cucumber (Chinese Long) v3	cuclsiB230
Lsi05G001930	Watermelon (97103) v2	lsiwmbB329