Lsi05G001140 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi05G001140
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr05 : 1860904 .. 1863064 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATTCCTTGAGATAATTTTCTCCTGTTCTACTTCCAAATAGTCCTTGGGTTTATGGAGTCCACATGCAGGTACTTGGTTTGTCATTTTCAACCATTAATATAAAAGCATGTAGTTGACTTCATATGTGTCTGCTAAAAAACGCTTTTTAAATCATGTTTGAGTCTGATGAAAGGTAGACAGGCGGCACTTACTCATGGATGCAGCCCATAACATCCATTTCACTGCCTTCTCCAGTTATCCCCTTTCCACTCACTGCAACTTTAAATATCATACCCTTTCTTTCTTACATGAAGAAGCAGAAGGATCACTCATGGCTTCCACCAAAACCTCTGCGTTTCTTTTTCTTATCCTCTTCTTCCTCTGTTCCTTCTCTTCAGGTAAGATCATCTTTCAACATCACAGAAATTGCTCATTGCCATAGCTTAGGAGATACATAACCTCCCTCTTTCCTTCCTTTCATTGCAGGACAGTTTGAGGACTATTAAGATGAGTCTTGGTCAGTCTCCAAACAAGGTACTGTAAAGTATAGCAGATCCATGGAGAAAGTGGTGAATATTTGGTTTTTTTCATGTTTTGAAGCTATTCACTTTTCTTTACACCAATTTCCCTGAGAAATGATGCTTTGATAATATATAGAGAGATCCAGAGATAATATAGCTTTGATGTCACTATATTCCTAACTTAGAATTGTTCTTACCTGGACCTTGTTTTGTCCACTCTCAGTAATTTTCACTATCAGTACTGTAATGGTTATCTAGCAGTAATATTTTCTTTCATGAAGGATGGATTCGAAATGGAGATGAGAAAGCTTTTGATGATTGACAGAGGAGGCGATTATAATGATCCTGTGGCGAACCGTAAGCATGAGCCTTTGAAACCTGGCACTTGAAAGCCATAGGACTTGAGATTCCTGTGTTTCCCTTAACCAAATAATGAGGAAGAAATGGCCAAATGGGTCTGTTTGTATTAAGGCCGTAGTAATCCAAGTGACTTTTGTGGGATGAAACTCACAAGTTTGTGGTAAAAATATTAATATCCGAGGAATAAATGCAATCATATGAGAAAGGAATCAAACATCTGTCTTCTGCACGAGAGTTTTTTAACCTAAAAAGGACTTTATGGTCCTCATTTCAAACAATTCATGATTCTCCATGTGAAGAAACTAGAAAGAAAAGAGCTTCTGAACTTCCATTTATTTTTAAACCAACTTGGATAGTGACTATATGAGTGAAATAGCAACTAATATATAGGCAGTATACCAGCTGTGTTTAAGAGATTCAAACCAGATAACGGTGTGCTGCTGCATTTTCCTGTTACTATAGAAGGGATATTTTAACTTTCAATTGTTATATTGAAAATCAAAATAACTACTGATGATCCACATGTTGCCGTTAAGACCGTGCTGGTCATTATCTAAGCCATTCCGACCTAGCCTTCCCATCAAGACAACAAGACAAAGAAGTAACATGTTCAAGCTTTTTATCTTGTATGGGAAGTGGTTGGATTGTCTGAAAACATCTGTTACTTCTGATGGAAGATGAAAACCAAAGAATGACGGTTTACGATTTAAACCGCAAGGGAAAGAAGAATTATGCAATTCTTGTGAAGGTATGTTAAGTTTGACTAAACTAGCTAGGATGTGATACATTGTATGACTATTCAATTACACTTTATAGGTGAAAAGTATGGAAGAACTTGATTATACAACAGTGGGAGACAGCAACTTTAAAGAGAGAAACTAGAGGATGCCCACCAAATACCGAAAGAAACAAGTCCGATCGTAGCGAAAGCTTGAGCCAGTTCAAATATGACATTGTCTTGCTTAAGGGGCAAATTTCGCCAATCTGTCCGCCTGCATTGCCAGTTAGTTTAAATCATAGTTGTATATTTAAGCAAATACCCATCCTAAATATCAGTTAGCTTCTCAGAAGAATGTTTATTGATTACATGCATTTGGAAACAAGCAAAGCCATTTTAACTTTGTTCTTTTAATGCCTACCAATGTAACTCAACATTCTTCTGTCCTCTCCTCGAAAATATTATGTATATTTAAGCAGATACTCACCCTAAATCAGCCATGATAATGCTGATATTGTCTTGTGACCCTTTATCCTGCACAATACAGAAACAATATTTTCTTTAATATAATTTCAAAACCA

mRNA sequence

TAATTCCTTGAGATAATTTTCTCCTGTTCTACTTCCAAATAGTCCTTGGGTTTATGGAGTCCACATGCAGGTACTTGGTTTGTCATTTTCAACCATTAATATAAAAGCATGTAGTTGACTTCATATGTGTCTGCTAAAAAACGCTTTTTAAATCATGTTTGAGTCTGATGAAAGGTAGACAGGCGGCACTTACTCATGGATGCAGCCCATAACATCCATTTCACTGCCTTCTCCAGTTATCCCCTTTCCACTCACTGCAACTTTAAATATCATACCCTTTCTTTCTTACATGAAGAAGCAGAAGGATCACTCATGGCTTCCACCAAAACCTCTGCGTTTCTTTTTCTTATCCTCTTCTTCCTCTGTTCCTTCTCTTCAGGACAGTTTGAGGACTATTAAGATGAGTCTTGGTCAGTCTCCAAACAAGGATGGATTCGAAATGGAGATGAGAAAGCTTTTGATGATTGACAGAGGAGGCGATTATAATGATCCTGTGGCGAACCGTAAGCATGAGCCTTTGAAACCTGGCACTTGAAAGCCATAGGACTTGAGATTCCTGTGTTTCCCTTAACCAAATAATGAGGAAGAAATGGCCAAATGGGTCTGTTTGTATTAAGGCCGTAGTAATCCAAGTGACTTTTGTGGGATGAAACTCACAAGTTTGTGGTAAAAATATTAATATCCGAGGAATAAATGCAATCATATGAGAAAGGAATCAAACATCTGTCTTCTGCACGAGAGTTTTTTAACCTAAAAAGGACTTTATGGTCCTCATTTCAAACAATTCATGATTCTCCATGTGAAGAAACTAGAAAGAAAAGAGCTTCTGAACTTCCATTTATTTTTAAACCAACTTGGATAGTGACTATATGAGTGAAATAGCAACTAATATATAGGCAGTATACCAGCTGTGTTTAAGAGATTCAAACCAGATAACGGTGTGCTGCTGCATTTTCCTGTTACTATAGAAGGGATATTTTAACTTTCAATTGTTATATTGAAAATCAAAATAACTACTGATGATCCACATGTTGCCGTTAAGACCGTGCTGGTCATTATCTAAGCCATTCCGACCTAGCCTTCCCATCAAGACAACAAGACAAAGAAGTAACATGTTCAAGCTTTTTATCTTGTATGGGAAGTGGTTGGATTGTCTGAAAACATCTGTTACTTCTGATGGAAGATGAAAACCAAAGAATGACGGTTTACGATTTAAACCGCAAGGGAAAGAAGAATTATGCAATTCTTGTGAAGGTGAAAAGTATGGAAGAACTTGATTATACAACAGTGGGAGACAGCAACTTTAAAGAGAGAAACTAGAGGATGCCCACCAAATACCGAAAGAAACAAGTCCGATCGTAGCGAAAGCTTGAGCCAGTTCAAATATGACATTGTCTTGCTTAAGGGGCAAATTTCGCCAATCTGTCCGCCTGCATTGCCAGTTAGTTTAAATCATAGTTGTATATTTAAGCAAATACCCATCCTAAATATCAGTTAGCTTCTCAGAAGAATGTTTATTGATTACATGCATTTGGAAACAAGCAAAGCCATTTTAACTTTGTTCTTTTAATGCCTACCAATGTAACTCAACATTCTTCTGTCCTCTCCTCGAAAATATTATGTATATTTAAGCAGATACTCACCCTAAATCAGCCATGATAATGCTGATATTGTCTTGTGACCCTTTATCCTGCACAATACAGAAACAATATTTTCTTTAATATAATTTCAAAACCA

Coding sequence (CDS)

ATGCAGCCCATAACATCCATTTCACTGCCTTCTCCAGTTATCCCCTTTCCACTCACTGCAACTTTAAATATCATACCCTTTCTTTCTTACATGAAGAAGCAGAAGGATCACTCATGGCTTCCACCAAAACCTCTGCGTTTCTTTTTCTTATCCTCTTCTTCCTCTGTTCCTTCTCTTCAGGACAGTTTGAGGACTATTAAGATGAGTCTTGGTCAGTCTCCAAACAAGGATGGATTCGAAATGGAGATGAGAAAGCTTTTGATGATTGACAGAGGAGGCGATTATAATGATCCTGTGGCGAACCGTAAGCATGAGCCTTTGAAACCTGGCACTTGA

Protein sequence

MQPITSISLPSPVIPFPLTATLNIIPFLSYMKKQKDHSWLPPKPLRFFFLSSSSSVPSLQDSLRTIKMSLGQSPNKDGFEMEMRKLLMIDRGGDYNDPVANRKHEPLKPGT
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G001140.1Lsi05G001140.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G001140Cucurbita pepo (Zucchini)cpelsiB036
Lsi05G001140Cucurbita pepo (Zucchini)cpelsiB037
Lsi05G001140Cucurbita pepo (Zucchini)cpelsiB154
Lsi05G001140Cucurbita pepo (Zucchini)cpelsiB178
Lsi05G001140Cucurbita pepo (Zucchini)cpelsiB622
Lsi05G001140Wild cucumber (PI 183967)cpilsiB209
Lsi05G001140Wild cucumber (PI 183967)cpilsiB381
Lsi05G001140Cucumber (Chinese Long) v2culsiB211
Lsi05G001140Cucumber (Chinese Long) v2culsiB379
Lsi05G001140Melon (DHL92) v3.5.1lsimeB337
Lsi05G001140Melon (DHL92) v3.5.1lsimeB368
Lsi05G001140Watermelon (Charleston Gray)lsiwcgB324
Lsi05G001140Watermelon (Charleston Gray)lsiwcgB332
Lsi05G001140Watermelon (97103) v1lsiwmB361
Lsi05G001140Watermelon (97103) v1lsiwmB376
Lsi05G001140Cucumber (Gy14) v2cgyblsiB198
Lsi05G001140Cucumber (Gy14) v2cgyblsiB343
Lsi05G001140Melon (DHL92) v3.6.1lsimedB352
Lsi05G001140Melon (DHL92) v3.6.1lsimedB384
Lsi05G001140Silver-seed gourdcarlsiB460
Lsi05G001140Silver-seed gourdcarlsiB488
Lsi05G001140Silver-seed gourdcarlsiB490
Lsi05G001140Silver-seed gourdcarlsiB904
Lsi05G001140Cucumber (Chinese Long) v3cuclsiB230
Lsi05G001140Cucumber (Chinese Long) v3cuclsiB401
Lsi05G001140Watermelon (97103) v2lsiwmbB318
Lsi05G001140Watermelon (97103) v2lsiwmbB329
Lsi05G001140Watermelon (97103) v2lsiwmbB339
Lsi05G001140Wax gourdlsiwgoB418
Lsi05G001140Wax gourdlsiwgoB431
Lsi05G001140Wax gourdlsiwgoB442
Lsi05G001140Bottle gourd (USVL1VR-Ls)lsilsiB013
Lsi05G001140Bottle gourd (USVL1VR-Ls)lsilsiB158
Lsi05G001140Cucumber (Gy14) v1cgylsiB003
Lsi05G001140Cucumber (Gy14) v1cgylsiB348
Lsi05G001140Cucurbita maxima (Rimu)cmalsiB289
Lsi05G001140Cucurbita maxima (Rimu)cmalsiB318
Lsi05G001140Cucurbita maxima (Rimu)cmalsiB385
Lsi05G001140Cucurbita maxima (Rimu)cmalsiB388
Lsi05G001140Cucurbita maxima (Rimu)cmalsiB584
Lsi05G001140Cucurbita moschata (Rifu)cmolsiB278
Lsi05G001140Cucurbita moschata (Rifu)cmolsiB307
Lsi05G001140Cucurbita moschata (Rifu)cmolsiB373
Lsi05G001140Cucurbita moschata (Rifu)cmolsiB370
Lsi05G001140Cucurbita moschata (Rifu)cmolsiB559