Lsi05G000160 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi05G000160
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRAN GTPase 3
Locationchr05 : 270512 .. 273551 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATAAACCACGCGCCCCTCTCCCCTTCTCCTCATTTCTTCGATTTCTCCTTCCCTCTCTCTTTCTCTCTCCTCTTCTCCGGCGACCGATCTTCCCCCGGTCAAGTTTTCGCCGGCAGGTCCTCCATCGAATCGATCTCTCCTTGTATACTTAACTTCGCCATCTAATTAGCCATGAATCCGGAATAGTAAGCTCGATTTCTTCTTTTCCTTGTTTTTTGGTTTTTTTACGCTTGCGTTTCTTTGAGTTGAATTTGTCGATTGGAAGCCCTGGTTTTGTTGTCGTTTTGCTGAATTGAGTTAGATCTGGTCGATGCGAAAGATGGAACTTTCCTTTTTAGGAAAATGTTTTTGTGTTGGATGGTTTAATTAATTAAGGATTTTAAGATTGTGATTCTGTTTGTTATGATTTGGTTGAAATCTGGGTGATCCATTTGAGATCTCTATTTATTTGGTGGCTCTTTGAATTTCATGTTTCTTCTTGGAATGATTGAAGGTGTTTGAACGTGAATTTGGTTTATTTTGATGATCAACTTGTAATATGAGCTTGAATTTCTGGAGGGTCTTGTAATCCGTTTGGTTCTTATTTTGTTTGGAGTGATTTCGGTAATTTCTTAAATTTAATTGCTCGGTTCTATATAATCTTTGAATCCTCGAGGAATTTATTCCTCTCTCGCTGTAGGAGTTGGTAATGGAGTTGTGATATTAAGTAGTGCCAAATTCGGTGCAATTTTTCACTCCTTTCTTCTTGTATCTGCAGTGACTATTTGTTTAAGCTTCTGCTTATCGGTGACTCCGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGTAAGTTGACAGGATTGATTCTCTCCCCATAATTACTTTTTCTCCTTAAACTTTTTTCCAACTTTTTCTTCTTATTATGATGTTGCCTGTTGAGATAGTTATTGTAGCTTTAGTTAATACATATATCTTCGCCATATCAAATTAGTAAAGAACAAGTTCTGTGGCTAATATGCCTACTTATGCGCTGAAAACTATGTGTTCTTTGTTGAGTTCCATCCACAATTTGTCTTTTACACAAATATGGAAACTTTTCCCAGTAGTTAACACCTCATCTATTGTTTCCACCCTTATCTGTATATCCAACAAAATTTCATTGTTCCTTTCCTTTCGAGATGGCCATAGATATTGTTCATCCTGGAGAGTGTATATATAAGTTATGGTTACCGAATGATCGTCTAAACAACTGCTATTGGTTATCACAACTAAATAAGTTGTTCACAGTGATTTACTATCTTTATATTTTACAGAAATTCTCATTTTGTGTTATAGTGAATCCCATAACTTTTGCATCGGTTGAGAATTTCTCGTCACTGTCAATTGGCATTTATTGAGTTCGTTTGAAGGCAGTTGTGGATGTATCGTAAATGCCCTTGTTCCTTAACTAATTCCTTCTGTTTTTCAAATCAGGATGATTCATATCTGGATAGCTACATTAGCACCATTGGAGTTGACTTTGTAAGCTTCTACCACATGTTTGGTTTTCTTTACTGATAACTATTGCATGAATTTTTTTCAGCTCTAATCCTTGAAATACGTTATTACTTGTAGAAAATCCGTACTGTGGAACAGGATGGGAAGACCATTAAGCTTCAAATTGTAAGTTTGAGTTTTTCAATTATTCTTGCTTTAATCTAAGCCTAGAGGATTAGTCTGGAAGCATGCCGTTCTTCTGTTGGTTAAATAAAATTTAACCGTTGATCTTTAGAGAGGGGGGGTGTTGATTTTAATTGAAAGTGCACAATTGTTTAGATTTTATTATTATTGCTTGTTTAAAAAGCTTTCAGTGGTTTTTTGGTCTTTGCTGTTAATTGGTAATTTTCACCATCAACTGTAGTGGGACACTGCCGGTCAGGAACGTTTTAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTAATTGCTACATTCTCTTCATTGTTCATTTTCTTTTCCTGCCCTTTTCCATCTCCTAAGAGTGAAGTCTGCTTGCGTATATTGTTCTGCCATGTAGGTCGTGTATGATGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAACAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCCAAGGTATGAATCTTACTTCGGCGTCTTTTGTAAAAGTATGTATTTGGATCTTGAATATGAATCTCAAGACTAAAATTCGTAACAATAATTTTCCAAAGGCTTTTGCGGATGAAATTGGGATCCCATTCATGGAAACAAGTGCTAAAAGTGCCACCAATGTAGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGTATGAGCTCTAGCAACTGTTGTGATTACTTGAATCTAATTTTATGGCAGTCTCTCAGTTCTTCATTTTACCGAATCAGGGTGGAGACAGCCTACGAGCTTACTCTCTCTCTCTCTCTTTTCTTTCTTTCCTTCTTAAATTATTATTATTATATTCATGAGTGTCTTAGCTAGCTTACACATACTTTGTAGATACCCACTGTGGTTTGGAGCTATTCCTTTTAAGTCTTTCATTTTTTTCACGTTCTCAATCCAAGCTTGGATAAACCTACCTTCTTAGCCCTATGATCTTTCACTAGTTATCCCGAGGTAGAAAATGGGGAGTGTTGAACGACCCCTAAGGTCTTGACGACTTCTAAGTTCTACTTCTATTCTTCACTGCACCGACAGTAGCTCCATTCGACCTTTAGGCGGCTAGATTCCTTAGCTGTCTTTTATTTGTTTGTCCATATATTGGCGCAATCTTGTGTTTCATTTATATAAAGCAGCAACCTCCACTCTTTACTTGATTTGCTTGTTTTGGGTTCATTTTTATAGGATGGCAACACAACCGATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCCTCTTAA

mRNA sequence

TTATAAACCACGCGCCCCTCTCCCCTTCTCCTCATTTCTTCGATTTCTCCTTCCCTCTCTCTTTCTCTCTCCTCTTCTCCGGCGACCGATCTTCCCCCGGTCAAGTTTTCGCCGGCAGGTCCTCCATCGAATCGATCTCTCCTTGTATACTTAACTTCGCCATCTAATTAGCCATGAATCCGGAATATGACTATTTGTTTAAGCTTCTGCTTATCGGTGACTCCGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGATGATTCATATCTGGATAGCTACATTAGCACCATTGGAGTTGACTTTAAAATCCGTACTGTGGAACAGGATGGGAAGACCATTAAGCTTCAAATTTGGGACACTGCCGGTCAGGAACGTTTTAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTCGTGTATGATGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAACAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCCAAGGCTTTTGCGGATGAAATTGGGATCCCATTCATGGAAACAAGTGCTAAAAGTGCCACCAATGTAGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCAACACAACCGATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCCTCTTAA

Coding sequence (CDS)

ATGAATCCGGAATATGACTATTTGTTTAAGCTTCTGCTTATCGGTGACTCCGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGATGATTCATATCTGGATAGCTACATTAGCACCATTGGAGTTGACTTTAAAATCCGTACTGTGGAACAGGATGGGAAGACCATTAAGCTTCAAATTTGGGACACTGCCGGTCAGGAACGTTTTAGAACAATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATTGTCGTGTATGATGTTACAGATCAGGAGAGCTTCAATAATGTTAAGCAATGGTTGAATGAAATAGACCGATATGCAAGTGAAAATGTGAACAAGCTTCTGGTTGGTAACAAATGTGACCTCACTGCAAATAAGGTCGTCTCTTATGAGACAGCCAAGGCTTTTGCGGATGAAATTGGGATCCCATTCATGGAAACAAGTGCTAAAAGTGCCACCAATGTAGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCAACACAACCGATGAACAATGCAAGGCCACCAACAGTGAATATTCGAGGACAACCTGTGAATCAGAAATCTGGTTGCTGCTCCTCTTAA

Protein sequence

MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNARPPTVNIRGQPVNQKSGCCSS
Homology
[Close]
BLAST of Lsi05G000160 vs. Swiss-Prot
Match: RAD2C_ARATH (Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=2 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.1e-101
Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ++PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. Swiss-Prot
Match: RAD2B_ARATH (Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 1.3e-100
Identity = 183/202 (90.59%), Postives = 190/202 (94.06%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           A+PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. Swiss-Prot
Match: YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.6e-100
Identity = 184/203 (90.64%), Postives = 194/203 (95.57%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWLNEIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQP-MN 180
           NK DLTANKVV+ ETAKAFADE+GIPFMETSAK+ATNV++AFMAMAA IK+RMA+QP   
Sbjct: 121 NKSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAA 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARP TV IRGQPVNQK+ CCSS
Sbjct: 181 NARPATVQIRGQPVNQKTSCCSS 203

[Close]
BLAST of Lsi05G000160 vs. Swiss-Prot
Match: RAD2A_ARATH (Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3)

HSP 1 Score: 362.1 bits (928), Expect = 4.0e-99
Identity = 178/203 (87.68%), Postives = 192/203 (94.58%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVE+AFMAM+A IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARPPTV IRGQPV QK+GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]
BLAST of Lsi05G000160 vs. Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 2.6e-98
Identity = 179/202 (88.61%), Postives = 187/202 (92.57%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL+SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDL  N+VVSYE  KA ADEIGIPF+ETSAK ATNVE+AFM MA EIKNRMA+QP  N
Sbjct: 121 NKCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATN 180

Query: 181 A-RPPTVNIRGQPVNQKSGCCS 202
           A +P TV +RGQPV Q+S CCS
Sbjct: 181 ASKPATVQMRGQPVAQQSSCCS 202

[Close]
BLAST of Lsi05G000160 vs. TrEMBL
Match: A0A0A0LID7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G913980 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 3.5e-110
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TrEMBL
Match: W9RPK9_9ROSA (Ras-related protein RABD2c OS=Morus notabilis GN=L484_024030 PE=4 SV=1)

HSP 1 Score: 399.1 bits (1024), Expect = 3.3e-108
Identity = 198/202 (98.02%), Postives = 200/202 (99.01%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK ATNVE+AFMAMAAEIKNRMA+QPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAEIKNRMASQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TrEMBL
Match: M5WBY4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011633mg PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 5.6e-108
Identity = 197/202 (97.52%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK++TNVE+AFMAMAAEIKNRMA+QPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMASQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TrEMBL
Match: I3T7J4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 397.9 bits (1021), Expect = 7.4e-108
Identity = 197/202 (97.52%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAMAAEIKNRMA+QP+NN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TrEMBL
Match: Q40203_LOTJA (RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 2.8e-107
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLT NKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAMAAEIKNRMA+QP+NN
Sbjct: 121 NKCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TAIR10
Match: AT4G17530.1 (AT4G17530.1 RAB GTPase homolog 1C)

HSP 1 Score: 370.5 bits (950), Expect = 6.4e-103
Identity = 183/202 (90.59%), Postives = 191/202 (94.55%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ++PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 SKPPTVQIRGQPVNQQSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TAIR10
Match: AT5G47200.1 (AT5G47200.1 RAB GTPase homolog 1A)

HSP 1 Score: 367.1 bits (941), Expect = 7.1e-102
Identity = 183/202 (90.59%), Postives = 190/202 (94.06%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIV YDVTD ESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK DLT+ KVVS ETAKAFADE+GIPF+ETSAK+ATNVEEAFMAM A IK RMA+QP   
Sbjct: 121 NKNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGG 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           A+PPTV IRGQPVNQ+SGCCSS
Sbjct: 181 AKPPTVQIRGQPVNQQSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. TAIR10
Match: AT1G02130.1 (AT1G02130.1 RAS 5)

HSP 1 Score: 362.1 bits (928), Expect = 2.3e-100
Identity = 178/203 (87.68%), Postives = 192/203 (94.58%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRF+DDSY++SYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ESFNNVKQWL+EIDRYAS+NVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPM-N 180
           NK DLT N+ + YETAKAFADEIGIPFMETSAK ATNVE+AFMAM+A IK RMA+QP  N
Sbjct: 121 NKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGN 180

Query: 181 NARPPTVNIRGQPVNQKSGCCSS 203
           NARPPTV IRGQPV QK+GCCS+
Sbjct: 181 NARPPTVQIRGQPVAQKNGCCST 203

[Close]
BLAST of Lsi05G000160 vs. TAIR10
Match: AT3G11730.1 (AT3G11730.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 302.0 bits (772), Expect = 2.8e-82
Identity = 148/202 (73.27%), Postives = 174/202 (86.14%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKTIKLQ
Sbjct: 1   MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGII+VYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+G
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NK D+  +KVVS ET +A ADE+GIPF+ETSAK + NVE+AF+ +A EIK +M +Q   N
Sbjct: 121 NKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNAN 180

Query: 181 --ARPPTVNIRGQPVNQKSGCC 201
             + P TV ++GQP+ Q +G C
Sbjct: 181 KTSGPGTVQMKGQPIQQNNGGC 202

[Close]
BLAST of Lsi05G000160 vs. TAIR10
Match: AT5G59840.1 (AT5G59840.1 Ras-related small GTP-binding family protein)

HSP 1 Score: 242.3 bits (617), Expect = 2.6e-64
Identity = 125/208 (60.10%), Postives = 155/208 (74.52%), Query Frame = 1 

Query: 4   EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
           +YDYL KLLLIGDSGVGKSCLLLRF+D S+  S+I+TIG+DFKIRT+E DGK IKLQIWD
Sbjct: 11  DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70

Query: 64  TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKC 123
           TAGQERFRTIT++YYRGA GI++VYDVTD+ SFNN++ W+  I+++AS+NVNK+LVGNK 
Sbjct: 71  TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKA 130

Query: 124 DLTANK-VVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNAR 183
           D+  +K  V     +A ADE GI F ETSAK+  NVEE F ++A +IK R+A    + A 
Sbjct: 131 DMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTD-SRAE 190

Query: 184 PPTVNI--------RGQPVNQKSGCCSS 203
           P T+ I         GQ   QKS CC S
Sbjct: 191 PATIKISQTDQAAGAGQ-ATQKSACCGS 216

[Close]
BLAST of Lsi05G000160 vs. NCBI nr
Match: gi|449461253|ref|XP_004148356.1| (PREDICTED: ras-related protein RABD2c [Cucumis sativus])

HSP 1 Score: 405.6 bits (1041), Expect = 5.1e-110
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTVNIRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. NCBI nr
Match: gi|703131224|ref|XP_010104830.1| (Ras-related protein RABD2c [Morus notabilis])

HSP 1 Score: 399.1 bits (1024), Expect = 4.8e-108
Identity = 198/202 (98.02%), Postives = 200/202 (99.01%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK ATNVE+AFMAMAAEIKNRMA+QPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAEIKNRMASQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. NCBI nr
Match: gi|595848879|ref|XP_007209617.1| (hypothetical protein PRUPE_ppa011633mg [Prunus persica])

HSP 1 Score: 398.3 bits (1022), Expect = 8.1e-108
Identity = 197/202 (97.52%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK++TNVE+AFMAMAAEIKNRMA+QPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMASQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. NCBI nr
Match: gi|388520849|gb|AFK48486.1| (unknown [Lotus japonicus])

HSP 1 Score: 397.9 bits (1021), Expect = 1.1e-107
Identity = 197/202 (97.52%), Postives = 201/202 (99.50%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK+ATNVE+AFMAMAAEIKNRMA+QP+NN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPVNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
           ARPPTV IRGQPVNQKSGCCSS
Sbjct: 181 ARPPTVQIRGQPVNQKSGCCSS 202

[Close]
BLAST of Lsi05G000160 vs. NCBI nr
Match: gi|657955483|ref|XP_008369210.1| (PREDICTED: ras-related protein RABD2c [Malus domestica])

HSP 1 Score: 396.7 bits (1018), Expect = 2.4e-107
Identity = 196/202 (97.03%), Postives = 200/202 (99.01%), Query Frame = 1 

Query: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60
           MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQ 60

Query: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120
           IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVG 120

Query: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNN 180
           NKCDLTANKVVSYETAKAFADEIGIPFMETSAK++TNVE+AFMAMAAEIKNRMA+QPMNN
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNSTNVEQAFMAMAAEIKNRMASQPMNN 180

Query: 181 ARPPTVNIRGQPVNQKSGCCSS 203
            RPPTV IRGQPVNQKSGCCSS
Sbjct: 181 TRPPTVQIRGQPVNQKSGCCSS 202

The following BLAST results are available for this feature:
BLAST of Lsi05G000160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RAD2C_ARATH1.1e-10190.59Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=2 SV=1[more]
RAD2B_ARATH1.3e-10090.59Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2 SV=1[more]
YPTM2_MAIZE1.6e-10090.64GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1[more]
RAD2A_ARATH4.0e-9987.68Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3[more]
RIC1_ORYSJ2.6e-9888.61Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2[more]
BLAST of Lsi05G000160 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LID7_CUCSA3.5e-110100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G913980 PE=4 SV=1[more]
W9RPK9_9ROSA3.3e-10898.02Ras-related protein RABD2c OS=Morus notabilis GN=L484_024030 PE=4 SV=1[more]
M5WBY4_PRUPE5.6e-10897.52Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011633mg PE=4 SV=1[more]
I3T7J4_LOTJA7.4e-10897.52Uncharacterized protein OS=Lotus japonicus PE=2 SV=1[more]
Q40203_LOTJA2.8e-10797.03RAB1C OS=Lotus japonicus GN=rab1C PE=2 SV=1[more]
BLAST of Lsi05G000160 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17530.16.4e-10390.59 RAB GTPase homolog 1C[more]
AT5G47200.17.1e-10290.59 RAB GTPase homolog 1A[more]
AT1G02130.12.3e-10087.68 RAS 5[more]
AT3G11730.12.8e-8273.27 Ras-related small GTP-binding family protein[more]
AT5G59840.12.6e-6460.10 Ras-related small GTP-binding family protein[more]
BLAST of Lsi05G000160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449461253|ref|XP_004148356.1|5.1e-110100.00PREDICTED: ras-related protein RABD2c [Cucumis sativus][more]
gi|703131224|ref|XP_010104830.1|4.8e-10898.02Ras-related protein RABD2c [Morus notabilis][more]
gi|595848879|ref|XP_007209617.1|8.1e-10897.52hypothetical protein PRUPE_ppa011633mg [Prunus persica][more]
gi|388520849|gb|AFK48486.1|1.1e-10797.52unknown [Lotus japonicus][more]
gi|657955483|ref|XP_008369210.1|2.4e-10797.03PREDICTED: ras-related protein RABD2c [Malus domestica][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0007264small GTPase mediated signal transduction
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR001806Small_GTPase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006886 intracellular protein transport
biological_process GO:0008150 biological_process
biological_process GO:0006913 nucleocytoplasmic transport
biological_process GO:0007264 small GTPase mediated signal transduction
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016020 membrane
cellular_component GO:0005575 cellular_component
cellular_component GO:0005622 intracellular
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0052663 antheraxanthin epoxidase activity
molecular_function GO:0071949 FAD binding
molecular_function GO:0052662 zeaxanthin epoxidase activity
molecular_function GO:0009540 zeaxanthin epoxidase [overall] activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi05G000160.1Lsi05G000160.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001806Small GTPase superfamilyPFAMPF00071Rascoord: 10..170
score: 3.5
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 7..164
score: 9.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 2..200
score: 2.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 4..180
score: 3.15
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 147..169
score: 2.0E-47coord: 9..30
score: 2.0E-47coord: 112..125
score: 2.0E-47coord: 50..72
score: 2.0E-47coord: 32..48
score: 2.0
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 1..202
score: 7.1E
NoneNo IPR availablePANTHERPTHR24073:SF520RAS-RELATED PROTEIN RABD2B-RELATEDcoord: 1..202
score: 7.1E
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 6..172
score: 4.0
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 11..171
score: 6.6
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 9..172
score: 3.5E
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 14..199
score: 5.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..173
score: 0.
NoneNo IPR availablePROFILEPS51419RABcoord: 4..202
score: 3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi05G000160Csa3G913980Cucumber (Chinese Long) v2culsiB213
Lsi05G000160Csa3G017260Cucumber (Chinese Long) v2culsiB219
Lsi05G000160CSPI03G47480Wild cucumber (PI 183967)cpilsiB211
Lsi05G000160CSPI03G02370Wild cucumber (PI 183967)cpilsiB218
Lsi05G000160Cucsa.321220Cucumber (Gy14) v1cgylsiB529
Lsi05G000160Cucsa.313830Cucumber (Gy14) v1cgylsiB506
Lsi05G000160CmaCh02G015680Cucurbita maxima (Rimu)cmalsiB579
Lsi05G000160CmaCh06G008070Cucurbita maxima (Rimu)cmalsiB763
Lsi05G000160CmaCh16G011130Cucurbita maxima (Rimu)cmalsiB319
Lsi05G000160CmaCh19G004040Cucurbita maxima (Rimu)cmalsiB490
Lsi05G000160CmoCh02G016100Cucurbita moschata (Rifu)cmolsiB556
Lsi05G000160CmoCh06G008300Cucurbita moschata (Rifu)cmolsiB755
Lsi05G000160CmoCh19G004120Cucurbita moschata (Rifu)cmolsiB475
Lsi05G000160CmoCh16G011630Cucurbita moschata (Rifu)cmolsiB309
Lsi05G000160Cla002820Watermelon (97103) v1lsiwmB347
Lsi05G000160MELO3C003327Melon (DHL92) v3.5.1lsimeB351
Lsi05G000160MELO3C013910Melon (DHL92) v3.5.1lsimeB372
Lsi05G000160ClCG10G002340Watermelon (Charleston Gray)lsiwcgB320
Lsi05G000160ClCG09G012830Watermelon (Charleston Gray)lsiwcgB315
Lsi05G000160MELO3C013910.2Melon (DHL92) v3.6.1lsimedB403
Lsi05G000160MELO3C003327.2Melon (DHL92) v3.6.1lsimedB366
Lsi05G000160Cla97C10G186920Watermelon (97103) v2lsiwmbB324
Lsi05G000160Cla97C09G175580Watermelon (97103) v2lsiwmbB353
Lsi05G000160Bhi05G000432Wax gourdlsiwgoB460
Lsi05G000160Bhi11G000052Wax gourdlsiwgoB411
Lsi05G000160Cp4.1LG15g03030Cucurbita pepo (Zucchini)cpelsiB212
Lsi05G000160Cp4.1LG14g09210Cucurbita pepo (Zucchini)cpelsiB180
Lsi05G000160Cp4.1LG05g02190Cucurbita pepo (Zucchini)cpelsiB621
Lsi05G000160CsGy3G044850Cucumber (Gy14) v2cgyblsiB200
Lsi05G000160CsGy3G002270Cucumber (Gy14) v2cgyblsiB205
Lsi05G000160Carg08797Silver-seed gourdcarlsiB716
Lsi05G000160Carg23253Silver-seed gourdcarlsiB643
Lsi05G000160Carg12039Silver-seed gourdcarlsiB512
Lsi05G000160CsaV3_3G002400Cucumber (Chinese Long) v3cuclsiB237
Lsi05G000160CsaV3_3G049890Cucumber (Chinese Long) v3cuclsiB232
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Lsi05G000160Lsi07G012640Bottle gourd (USVL1VR-Ls)lsilsiB162
The following block(s) are covering this gene:
GeneOrganismBlock
Lsi05G000160Silver-seed gourdcarlsiB192
Lsi05G000160Cucurbita maxima (Rimu)cmalsiB488
Lsi05G000160Cucurbita moschata (Rifu)cmolsiB472
Lsi05G000160Cucurbita pepo (Zucchini)cpelsiB210