Lsi04G024240 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G024240
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ATP-dependent RNA helicase
Location	chr04 : 31343449 .. 31349883 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GATCTCTTCCGGAATCGGACGGAACGGCGGGGTTGGAGCCTCAGCTTCTCACCTGCCAACGTAACGTTTCAAAGACCGGTAAATAACCACTTTTAGTTCTATCTGACTCCACTACGCAATCCCAAGAAACGGAATTAGGGTTTTCGACTGCTCCTTCCTCCCCGCCCTGCTTAACCTGGTTAGCTTTTCTAATTTCATACTTTTTCAGATTGCTCGGGTTCCTTTTTTTTGTTTTTTTTTCCTAGTTGTTTAAGCCACTGTCACAATCTTTTTCCCCGTAAATTCCCTGTTGGATTTGAATCAGGTCCATCATAGATTCAGTCACGCATCAATACGTCGCAGTAGACACATTCTAACAGTGAAGGGAGGACATATCGTAATTTCGAAGCCCTAAGCGTCGCCCCGATTAATCACTAATTGGGGCTATTCAGTTCTTGCCTTTCAGTTTCGAATTGTTTTTTTCCCCCTTTTGATTTGGAAGCTTTGTAGCAGCAAGCAATGGAGGAAGGGAGGAGTAAATCTAGAAGAGACGATTTGGATGACCCAAAGAAGAGTCATCGGGACCGCGATAGGGAAAGGGATAAAGAGAGAAACGGAGATAGAGGCAGAGACAAGGAGAAAAGAGATCGGGAGAGTCGACGTTCTGAGAGGGAGAAGAGTGTTGATTCTGAAGAGCAGCAGTACGAGAGGGAGAAGGAAAAGCTTAAAAGGGACAAGGATAAAACACGGAGTCGGGATGATGAAAGAGATAGAACAAGGGATAGGAGGAAGGATAGAGACAAAGAAAGGGACAGGGACAAAGAAGATAGGGCGAGGGAGAAAACCAGGGACAAGGAGAAGGAGAGAGAAAAGGAGAAGAGGGAAAGGGCAAGAGAGAAAGAAAGAGAGAAGAGAGAACGCATCAAAGAAGATCGTGAGAGGGATAGAGAAAGAGAGAGGGAGAGGAGAGAACGTGAGAGAGATAGGGAAAAGGAAAGAGACAAAGATAGAAGGAAGCGACGGGAAGTTGTTAGCGACTGTAGTGATGAAGACTCTACTGACCATGGTAGGAAGCGGCGTAGGAGAGATGATGATGACCATAGAGCTCACGAAAGTAATAGCAGGATGAATAAGCAAAGAGATCACATCGAAGAGAGTCCACAAGAAAAGAGTGAAGAAGATGCATCTGATAAGAATGAAACAAAACCAACTCGGGAAGAGGAGCTGGAAAATGAACAAAGGAGGTTGGATGAAGAAATGGAAAAACGAAGGCGAAGAGTTCAGGAGTGGCAAAAGTCGCGAAGATTGAAAGAAGAAGCTGATGGAGATAAGCAGGGTGAACCGAATGCTGATGAACCAAAATCTGGCAAGACATGGACCCTTGAAGGTGAATCTGATGATGAGTATGACAATGCCAGGCCCCCTGAAACAGATATGGATGTGGATGAAAATCCTAAGCCGCTTGTAGATGGTGAACAGGTTGCAGTGGACTTCAATAATGGCAATGAAGCAGCTGCACCTCCACTGCAAGATAGCATTAATGGCGATGCAGGTGATGATGAAATTGATCCTCTGGATGCTTTCATGAACTCCATGGTGTTGCCTGAAGTGGAGAAGCTAAACAAAGTTGAGGCCCCCACAGTTAATGATGATAAAATTGCCGAGTTGAAGAGCAGAGACAAACCAAGTGATCAGAGTGGTGGTAAACCCCAAAGAAGAATTTCAAATAAATCAATGGGTAGAATAATTCCTGGTGAAGACTCTGACACAGACTACGGAGATCTTGAGAACGATGCAGATACTTTAGAAGATGAAGATGACGACGAATTCATGAAAAGGGTGAAGAAGACAAAAGCCGAGAAGCTCTCTATCGTTGACCATTCAAAGATGGATTATCAACCTTTCCGAAAAAATTTCTATATTGAAGTGAAGGAGATATCGAGGATGACTTTGGAAGAAGTTGCTGCTTATCGGAAGCAATTGGAATTGAAGATACATGGAAAAGATGTTCCAAAGCCTGTTAAAACCTGGCATCAAACTGGACTTACGAGTAAAATCTTAGAAATGATTAAAAAACTTAACTATGAGAAGCCAATGCCAATACAAGCTCAGGCATTGCCAATAGTCATGAGTGGTCGAGATTGCATTGGTATTGCCAAAACTGGATCTGGAAAAACACTTGCATTTGTGCTTCCAATGCTGAGGCATATCAAGGATCAATCACCTGTTGTACCTGGTGATGGTCCTATTGGGCTTATAATGGCTCCCACCAGAGAGTTGGTCCAGCAGATCCACAGTGATATAAAGAAATTTTCAAAGGTTCTGGGTTTAAGGTGTGTGCCTGTATATGGAGGTTCTGGTGTTGCCCAGCAAATTAGTGAGCTTAAGCGTGGTGCTGAAATAGTAGTTTGTACTCCAGGAAGGATGATTGATATACTCTGTACTAGTGCCGGGAAAATAACAAATCTGCGTAGAGTTACATATTTGGTTATGGATGAAGCTGATAGGATGTTTGACATGGGTTTTGAACCTCAGATTACTCGAATTGTTCAGAATATTCGACCAGACCGTCAAACTGTACTATTTTCTGCAACTTTTCCTCGTCAGGTTGAAATTTTGGCTCGCAAAGTTTTGAACAAACCTGTTGAAATACAGGTTGGTGGGAGGAGTGTTGTGAATAAGGACATAACACAGTTGGTTGAAGTGAGGCCCGAAAATGAGAGGTTTTTGAGACTATTAGAGCTGTTGGGAGAATGGTATGAGAAAGGCAAGATTCTAATCTTTGTCCACTCACAGGAGAAATGTGATGCCCTCTTTAGGGATCTCCTCAAGCATGGTTACCCTTGCCTCTCACTCCATGGAGCAAAGGATCAGACTGATCGTGAGTCTACCATATCAGATTTCAAAAGCAATGTGTGCAACTTGTTAATTGCAACTAGTATTGCTGCCCGGGGTTTAGATGTCAAGGAGCTGGAGCTAGTGATCAATTTTGATGTCCCAAACCATTATGAAGATTATGTGCATCGTGTCGGTCGCACAGGCCGAGCGGGTCGTAAAGGGTGCGCCATCACATTTATTGCTGAGGAAGATTCAAGGTATGCACCAGATCTGGTGAAAGCATTGGAACTCTCCGAGCAGGTTGTTCCTAATGACCTGAGAGCTCTTGCTGATAGTTTCATGGCAAAGGTGAATCAGGGACTAGAGCAGGCCCATGGAACTGGCTATGGTGGCAGTGGGTTCAAATTTAACGAGGAAGAAGATGAAGTGAGGAGGGCAGCGAAGAAAGCGCAAGCTAAAGAATATGGTTTTGAGGAGGACAAATCAGATTCAGAAGATGAAGATGATGGTGTCCGGAAGGCAGGTGGCGATATCTCACAGCAGGCAGCTTTGGCCCAGATAGCTGCTATAGCAGCTGCCACTAAAGTCAGTGCAGCTTCAATCACAACTCCCAGCTCTGCCGCTCAGCTACTTCCAAATGGCGGATTACCTGTTTCTTTGCCCGGTGTTCTTGGGCTCACAATTCCAGGAACAATGGCAGTTATACCTGGTGCAACATTGCCTGCAGTTACTAATGACGGGGCCGCTGCAAGGGCAGCATTAGCAGCTGCAATGAACTTGCAACACAACCTAGCCAAGATTCAAGCTAGTGCAATACCTGAACACTATGAAGCCGAATTGGAAATTAACGATTTCCCACAGAATGCTCGATGGAAGGTAACACACAAGGAGACCTTAGGCCCAATTTCAGAGTGGACTGGAGCTGCTATTACTACTAGGGGACAGTTCTTTCCACCTGGCAAGATTGCTGGACCTGGAGAACGCAAGCTTTACTTGTTCATTGAAGGTCCTACCGAACAATCTGTTAAGAGAGCTAAAGCTGAGTTAAAACGTGTCCTTGAGGACATTACAAACCAAACATTGTCACTTCCCGGTGGATCACAACCAGGCAGATACTCGGTTGTTTAAGTGTGAGAACTTAATCTTTACTTTGACGGCATGGTTTACTTGAATCCTTCTGCTGCTGGAATATGCACCTTTCATGTGCTTTTTCCTCCATTTCTTTGTTTCTATTTTCAAATTGAGAAACAAAAGAATCTATTTGTTGAGCCAGGAGCATAGTATTTCTCAGGATTTCAAATTCTTCTTAGCCTTCTAATATCTTGTAGAATTTTGGCCTAGATGTAAGATATCATTACTCTATATATATATTATTTCATTGTTCTCCTCTTTTGATTTTTGTTCTGTTTTTCTTTTCCTATGGTGCGAGGGATGTTATATACCTAGATCGCATGTTCAATATTGTCTCTCCGCTATTACCTTGCAATAGTGGCTATCAGATGGCAATTATGGTGCGCCACCCTTTGCGTTAGTGTTCCAGACATCCTTGCTCAATTTGATCAATGCTCCAGCGGGGCGAACGCTTACTATTGATACCATATTTCATCCATTAGAGTCTTTTACCCTTCTTTTGGCTTTATTTGAATTGTATTTTTCCTTTTTTCCAGGTTTGATTGAGAATGCTGCTGTTGATAGTTTTTCTTCCGTGATCCTCACGGTGTTCTGGTTTTCAGCTGGAATGTTGATATTCCTCAAGTTAGAAGGTCACGGTTTGTCATATCTGGTTTATGAAATATACATATATTGTACTGTTGATCCCCCATACAGATACTGTATTTCATATATGACTATTTCATATATGAAATATTTATAGTATTCAGAATGTTGCCTTTTATCTGATCCTTAGATTCTCAGACGTTTCTACCAATTTACAATGCTTTCCAAGAATCACTTGCCTGATTGTGATAGATGAACTTGCGTATGTTATGGGATGCTATCATCTGTTGAAATTGTTGCGACTCCTTTCCGTTCTATTTGTTAACACTTTCTATGTTAGGAACAAGTATCGTGATTGTTTTGTTTGTAATACACAGACAAGAAAAAATAATGGGTGAGCCTTGAGAACCGTATTTCTTCCTCTACTTAGAGAATGGGGAAATAAGAATGATTGATCGTTTCATGGTTAATTGAAATGATTGAGCGCAAATTTTGTCAAACACAGGCATCCGCCATTGCAGGGTTGTGAAATCTGGGGTATGTCTATGGCATAGCAGAGCTCGGACTGAAGGAAATTAAGAAGAGAGGGTGGTGGGGGAGGTTTCCCAGAGGAGAGGAGTCAGAAACAGTGTTAGAAGTTGGGGAGTCCCATTCGTTTTATTTAGAATAAATATGTTTGGTTGTTTGGTTTCCAATTCCATTATGAGATAATGGTTTGCCTTGTAGGCTTCTTTCTTATGCAGCGAAGGTATTTTGAACTCTCTGAGCTTCACGTCGTTCTTCATGGAGGAGGCCTGCGTCTGGAACGATGTTATTCTTCATTCAATTGGGTATGGGTAAGGCTATCCATCCATCGATCCCTTGTTCCAACTTTCTTAAGTTAGCTTTTGTTTGTGTTCAAAGTTCCAAAGTTCTACGAAACAATAATATATATTGAAAGGTTGGTTGTGTAATTTTAAGGACGCCGTTTGTTTCTGATAGTTTAATTCTCCTACATAGATGAGCAATTGAATTTTTAGTTGCTAAAAGTTTGTAGCTTTAACTAGTAATTATATTAAAATATTCCCCATATTTGAGACTTATTCTATTTTAGTTTTTATTTACTTTCAATTGTTAAAATTATTTTCTAGTTTATTGTTAACTTAATGAAAGTTATTGTTTTTATTTTACCAATTCTTATTAAAATTAACTTTAAATTAACCCAGGGCTAATTTTAAGATGAAAAATATCAATTTTATTTTCCAAAATTTTACTAGTTGTATTAATTAAAATTATGAAATATATATATATGTATGTTAGTGTGTATCAATTATCACTCTCCATAAAGTTCTTGAGAAAACATAATATGAGACTTATCAGTTTTTTAATTTAAAAAGACAGAAGTAAAGTGAATCAATTTCTACTCTTAATTAGATTTTTTTTTAGAACTGTCCATGCACTCACTATTAAAAGGATTCAAATGGTGAAAATTTAGGAGTTTAATTATAAGTTATAAGTTTCATACTAGGGATTGGAATTTGAAGGATAGTGTTAATTAATACACTTATATATTGATTTGTTTTTTTTTTAAAAAAATTGATTGCTACTATTTTGAAGGTTGTGTGGATACTGCGCTTGGATCAGCAGAGTGATCTTGGAGCTGATAGGGCCTATGGGCGAATCTTTTTCAAAATTCCGAAGGTTGGAAACGAAACGACCGGCGTTTTATTGTTCCTTCCAATAAAATTGTTTCTTTATTCTCTAGAAAAAGATATCTCAAAGAAAAGTTTCAAACAAAAATGATCGCATTTGTAGAGTTCTAAAGTAAATAATGATTACGACCATGTCATATCATGTTTCATTTTACATTGTTTATTAGGATTTAAGGACTGGTATAGTAAATCTCCCTTTCTTTCTTTCTTT

mRNA sequence

GATCTCTTCCGGAATCGGACGGAACGGCGGGGTTGGAGCCTCAGCTTCTCACCTGCCAACGTAACGTTTCAAAGACCGGTAAATAACCACTTTTAGTTCTATCTGACTCCACTACGCAATCCCAAGAAACGGAATTAGGGTTTTCGACTGCTCCTTCCTCCCCGCCCTGCTTAACCTGGTCCATCATAGATTCAGTCACGCATCAATACGTCGCAGTAGACACATTCTAACAGTGAAGGGAGGACATATCGTAATTTCGAAGCCCTAAGCGTCGCCCCGATTAATCACTAATTGGGGCTATTCAGTTCTTGCCTTTCAGTTTCGAATTGTTTTTTTCCCCCTTTTGATTTGGAAGCTTTGTAGCAGCAAGCAATGGAGGAAGGGAGGAGTAAATCTAGAAGAGACGATTTGGATGACCCAAAGAAGAGTCATCGGGACCGCGATAGGGAAAGGGATAAAGAGAGAAACGGAGATAGAGGCAGAGACAAGGAGAAAAGAGATCGGGAGAGTCGACGTTCTGAGAGGGAGAAGAGTGTTGATTCTGAAGAGCAGCAGTACGAGAGGGAGAAGGAAAAGCTTAAAAGGGACAAGGATAAAACACGGAGTCGGGATGATGAAAGAGATAGAACAAGGGATAGGAGGAAGGATAGAGACAAAGAAAGGGACAGGGACAAAGAAGATAGGGCGAGGGAGAAAACCAGGGACAAGGAGAAGGAGAGAGAAAAGGAGAAGAGGGAAAGGGCAAGAGAGAAAGAAAGAGAGAAGAGAGAACGCATCAAAGAAGATCGTGAGAGGGATAGAGAAAGAGAGAGGGAGAGGAGAGAACGTGAGAGAGATAGGGAAAAGGAAAGAGACAAAGATAGAAGGAAGCGACGGGAAGTTGTTAGCGACTGTAGTGATGAAGACTCTACTGACCATGGTAGGAAGCGGCGTAGGAGAGATGATGATGACCATAGAGCTCACGAAAGTAATAGCAGGATGAATAAGCAAAGAGATCACATCGAAGAGAGTCCACAAGAAAAGAGTGAAGAAGATGCATCTGATAAGAATGAAACAAAACCAACTCGGGAAGAGGAGCTGGAAAATGAACAAAGGAGGTTGGATGAAGAAATGGAAAAACGAAGGCGAAGAGTTCAGGAGTGGCAAAAGTCGCGAAGATTGAAAGAAGAAGCTGATGGAGATAAGCAGGGTGAACCGAATGCTGATGAACCAAAATCTGGCAAGACATGGACCCTTGAAGGTGAATCTGATGATGAGTATGACAATGCCAGGCCCCCTGAAACAGATATGGATGTGGATGAAAATCCTAAGCCGCTTGTAGATGGTGAACAGGTTGCAGTGGACTTCAATAATGGCAATGAAGCAGCTGCACCTCCACTGCAAGATAGCATTAATGGCGATGCAGGTGATGATGAAATTGATCCTCTGGATGCTTTCATGAACTCCATGGTGTTGCCTGAAGTGGAGAAGCTAAACAAAGTTGAGGCCCCCACAGTTAATGATGATAAAATTGCCGAGTTGAAGAGCAGAGACAAACCAAGTGATCAGAGTGGTGGTAAACCCCAAAGAAGAATTTCAAATAAATCAATGGGTAGAATAATTCCTGGTGAAGACTCTGACACAGACTACGGAGATCTTGAGAACGATGCAGATACTTTAGAAGATGAAGATGACGACGAATTCATGAAAAGGGTGAAGAAGACAAAAGCCGAGAAGCTCTCTATCGTTGACCATTCAAAGATGGATTATCAACCTTTCCGAAAAAATTTCTATATTGAAGTGAAGGAGATATCGAGGATGACTTTGGAAGAAGTTGCTGCTTATCGGAAGCAATTGGAATTGAAGATACATGGAAAAGATGTTCCAAAGCCTGTTAAAACCTGGCATCAAACTGGACTTACGAGTAAAATCTTAGAAATGATTAAAAAACTTAACTATGAGAAGCCAATGCCAATACAAGCTCAGGCATTGCCAATAGTCATGAGTGGTCGAGATTGCATTGGTATTGCCAAAACTGGATCTGGAAAAACACTTGCATTTGTGCTTCCAATGCTGAGGCATATCAAGGATCAATCACCTGTTGTACCTGGTGATGGTCCTATTGGGCTTATAATGGCTCCCACCAGAGAGTTGGTCCAGCAGATCCACAGTGATATAAAGAAATTTTCAAAGGTTCTGGGTTTAAGGTGTGTGCCTGTATATGGAGGTTCTGGTGTTGCCCAGCAAATTAGTGAGCTTAAGCGTGGTGCTGAAATAGTAGTTTGTACTCCAGGAAGGATGATTGATATACTCTGTACTAGTGCCGGGAAAATAACAAATCTGCGTAGAGTTACATATTTGGTTATGGATGAAGCTGATAGGATGTTTGACATGGGTTTTGAACCTCAGATTACTCGAATTGTTCAGAATATTCGACCAGACCGTCAAACTGTACTATTTTCTGCAACTTTTCCTCGTCAGGTTGAAATTTTGGCTCGCAAAGTTTTGAACAAACCTGTTGAAATACAGGTTGGTGGGAGGAGTGTTGTGAATAAGGACATAACACAGTTGGTTGAAGTGAGGCCCGAAAATGAGAGGTTTTTGAGACTATTAGAGCTGTTGGGAGAATGGTATGAGAAAGGCAAGATTCTAATCTTTGTCCACTCACAGGAGAAATGTGATGCCCTCTTTAGGGATCTCCTCAAGCATGGTTACCCTTGCCTCTCACTCCATGGAGCAAAGGATCAGACTGATCGTGAGTCTACCATATCAGATTTCAAAAGCAATGTGTGCAACTTGTTAATTGCAACTAGTATTGCTGCCCGGGGTTTAGATGTCAAGGAGCTGGAGCTAGTGATCAATTTTGATGTCCCAAACCATTATGAAGATTATGTGCATCGTGTCGGTCGCACAGGCCGAGCGGGTCGTAAAGGGTGCGCCATCACATTTATTGCTGAGGAAGATTCAAGGTATGCACCAGATCTGGTGAAAGCATTGGAACTCTCCGAGCAGGTTGTTCCTAATGACCTGAGAGCTCTTGCTGATAGTTTCATGGCAAAGGTGAATCAGGGACTAGAGCAGGCCCATGGAACTGGCTATGGTGGCAGTGGGTTCAAATTTAACGAGGAAGAAGATGAAGTGAGGAGGGCAGCGAAGAAAGCGCAAGCTAAAGAATATGGTTTTGAGGAGGACAAATCAGATTCAGAAGATGAAGATGATGGTGTCCGGAAGGCAGGTGGCGATATCTCACAGCAGGCAGCTTTGGCCCAGATAGCTGCTATAGCAGCTGCCACTAAAGTCAGTGCAGCTTCAATCACAACTCCCAGCTCTGCCGCTCAGCTACTTCCAAATGGCGGATTACCTGTTTCTTTGCCCGGTGTTCTTGGGCTCACAATTCCAGGAACAATGGCAGTTATACCTGGTGCAACATTGCCTGCAGTTACTAATGACGGGGCCGCTGCAAGGGCAGCATTAGCAGCTGCAATGAACTTGCAACACAACCTAGCCAAGATTCAAGCTAGTGCAATACCTGAACACTATGAAGCCGAATTGGAAATTAACGATTTCCCACAGAATGCTCGATGGAAGGTAACACACAAGGAGACCTTAGGCCCAATTTCAGAGTGGACTGGAGCTGCTATTACTACTAGGGGACAGTTCTTTCCACCTGGCAAGATTGCTGGACCTGGAGAACGCAAGCTTTACTTGTTCATTGAAGGTCCTACCGAACAATCTGTTAAGAGAGCTAAAGCTGAGTTAAAACGTGTCCTTGAGGACATTACAAACCAAACATTGTCACTTCCCGGTGGATCACAACCAGGCAGATACTCGGTTGTTTAATGCGAGGGATGTTATATACCTAGATCGCATGTTCAATATTGTCTCTCCGCTATTACCTTGCAATAGTGGCTATCAGATGGCAATTATGGTGCGCCACCCTTTGCGTTTGATTGAGAATGCTGCTGTTGATAGTTTTTCTTCCGTGATCCTCACGGTGTTCTGGTTTTCAGCTGGAATGTTGATATTCCTCAAGTTAGAAGGTCACGGTTTGTCATATCTGGTTTATGAAATATACATATATTGTACTGTTGATCCCCCATACAGATACTGTATTTCATATATGACTATTTCATATATGAAATATTTATAGTATTCAGAATGTTGCCTTTTATCTGATCCTTAGATTCTCAGACGTTTCTACCAATTTACAATGCTTTCCAAGAATCACTTGCCTGATTGTGATAGATGAACTTGCGTATGTTATGGGATGCTATCATCTGTTGAAATTGTTGCGACTCCTTTCCGTTCTATTTGTTAACACTTTCTATGTTAGGAACAAGTATCGTGATTGTTTTGTTTGTAATACACAGACAAGAAAAAATAATGGGTGAGCCTTGAGAACCGTATTTCTTCCTCTACTTAGAGAATGGGGAAATAAGAATGATTGATCGTTTCATGGTTAATTGAAATGATTGAGCGCAAATTTTGTCAAACACAGGCATCCGCCATTGCAGGGTTGTGAAATCTGGGGTATGTCTATGGCATAGCAGAGCTCGGACTGAAGGAAATTAAGAAGAGAGGGTGGTGGGGGAGGTTTCCCAGAGGAGAGGAGTCAGAAACAGTGTTAGAAGTTGGGGAGTCCCATTCGTTTTATTTAGAATAAATATGTTTGGTTGTTTGGTTTCCAATTCCATTATGAGATAATGGTTTGCCTTGTAGGCTTCTTTCTTATGCAGCGAAGGTATTTTGAACTCTCTGAGCTTCACGTCGTTCTTCATGGAGGAGGCCTGCGTCTGGAACGATGTTATTCTTCATTCAATTGGGTATGGGTTGTGTGGATACTGCGCTTGGATCAGCAGAGTGATCTTGGAGCTGATAGGGCCTATGGGCGAATCTTTTTCAAAATTCCGAAGGTTGGAAACGAAACGACCGGCGTTTTATTGTTCCTTCCAATAAAATTGTTTCTTTATTCTCTAGAAAAAGATATCTCAAAGAAAAGTTTCAAACAAAAATGATCGCATTTGTAGAGTTCTAAAGTAAATAATGATTACGACCATGTCATATCATGTTTCATTTTACATTGTTTATTAGGATTTAAGGACTGGTATAGTAAATCTCCCTTTCTTTCTTTCTTT

Coding sequence (CDS)

ATGGAGGAAGGGAGGAGTAAATCTAGAAGAGACGATTTGGATGACCCAAAGAAGAGTCATCGGGACCGCGATAGGGAAAGGGATAAAGAGAGAAACGGAGATAGAGGCAGAGACAAGGAGAAAAGAGATCGGGAGAGTCGACGTTCTGAGAGGGAGAAGAGTGTTGATTCTGAAGAGCAGCAGTACGAGAGGGAGAAGGAAAAGCTTAAAAGGGACAAGGATAAAACACGGAGTCGGGATGATGAAAGAGATAGAACAAGGGATAGGAGGAAGGATAGAGACAAAGAAAGGGACAGGGACAAAGAAGATAGGGCGAGGGAGAAAACCAGGGACAAGGAGAAGGAGAGAGAAAAGGAGAAGAGGGAAAGGGCAAGAGAGAAAGAAAGAGAGAAGAGAGAACGCATCAAAGAAGATCGTGAGAGGGATAGAGAAAGAGAGAGGGAGAGGAGAGAACGTGAGAGAGATAGGGAAAAGGAAAGAGACAAAGATAGAAGGAAGCGACGGGAAGTTGTTAGCGACTGTAGTGATGAAGACTCTACTGACCATGGTAGGAAGCGGCGTAGGAGAGATGATGATGACCATAGAGCTCACGAAAGTAATAGCAGGATGAATAAGCAAAGAGATCACATCGAAGAGAGTCCACAAGAAAAGAGTGAAGAAGATGCATCTGATAAGAATGAAACAAAACCAACTCGGGAAGAGGAGCTGGAAAATGAACAAAGGAGGTTGGATGAAGAAATGGAAAAACGAAGGCGAAGAGTTCAGGAGTGGCAAAAGTCGCGAAGATTGAAAGAAGAAGCTGATGGAGATAAGCAGGGTGAACCGAATGCTGATGAACCAAAATCTGGCAAGACATGGACCCTTGAAGGTGAATCTGATGATGAGTATGACAATGCCAGGCCCCCTGAAACAGATATGGATGTGGATGAAAATCCTAAGCCGCTTGTAGATGGTGAACAGGTTGCAGTGGACTTCAATAATGGCAATGAAGCAGCTGCACCTCCACTGCAAGATAGCATTAATGGCGATGCAGGTGATGATGAAATTGATCCTCTGGATGCTTTCATGAACTCCATGGTGTTGCCTGAAGTGGAGAAGCTAAACAAAGTTGAGGCCCCCACAGTTAATGATGATAAAATTGCCGAGTTGAAGAGCAGAGACAAACCAAGTGATCAGAGTGGTGGTAAACCCCAAAGAAGAATTTCAAATAAATCAATGGGTAGAATAATTCCTGGTGAAGACTCTGACACAGACTACGGAGATCTTGAGAACGATGCAGATACTTTAGAAGATGAAGATGACGACGAATTCATGAAAAGGGTGAAGAAGACAAAAGCCGAGAAGCTCTCTATCGTTGACCATTCAAAGATGGATTATCAACCTTTCCGAAAAAATTTCTATATTGAAGTGAAGGAGATATCGAGGATGACTTTGGAAGAAGTTGCTGCTTATCGGAAGCAATTGGAATTGAAGATACATGGAAAAGATGTTCCAAAGCCTGTTAAAACCTGGCATCAAACTGGACTTACGAGTAAAATCTTAGAAATGATTAAAAAACTTAACTATGAGAAGCCAATGCCAATACAAGCTCAGGCATTGCCAATAGTCATGAGTGGTCGAGATTGCATTGGTATTGCCAAAACTGGATCTGGAAAAACACTTGCATTTGTGCTTCCAATGCTGAGGCATATCAAGGATCAATCACCTGTTGTACCTGGTGATGGTCCTATTGGGCTTATAATGGCTCCCACCAGAGAGTTGGTCCAGCAGATCCACAGTGATATAAAGAAATTTTCAAAGGTTCTGGGTTTAAGGTGTGTGCCTGTATATGGAGGTTCTGGTGTTGCCCAGCAAATTAGTGAGCTTAAGCGTGGTGCTGAAATAGTAGTTTGTACTCCAGGAAGGATGATTGATATACTCTGTACTAGTGCCGGGAAAATAACAAATCTGCGTAGAGTTACATATTTGGTTATGGATGAAGCTGATAGGATGTTTGACATGGGTTTTGAACCTCAGATTACTCGAATTGTTCAGAATATTCGACCAGACCGTCAAACTGTACTATTTTCTGCAACTTTTCCTCGTCAGGTTGAAATTTTGGCTCGCAAAGTTTTGAACAAACCTGTTGAAATACAGGTTGGTGGGAGGAGTGTTGTGAATAAGGACATAACACAGTTGGTTGAAGTGAGGCCCGAAAATGAGAGGTTTTTGAGACTATTAGAGCTGTTGGGAGAATGGTATGAGAAAGGCAAGATTCTAATCTTTGTCCACTCACAGGAGAAATGTGATGCCCTCTTTAGGGATCTCCTCAAGCATGGTTACCCTTGCCTCTCACTCCATGGAGCAAAGGATCAGACTGATCGTGAGTCTACCATATCAGATTTCAAAAGCAATGTGTGCAACTTGTTAATTGCAACTAGTATTGCTGCCCGGGGTTTAGATGTCAAGGAGCTGGAGCTAGTGATCAATTTTGATGTCCCAAACCATTATGAAGATTATGTGCATCGTGTCGGTCGCACAGGCCGAGCGGGTCGTAAAGGGTGCGCCATCACATTTATTGCTGAGGAAGATTCAAGGTATGCACCAGATCTGGTGAAAGCATTGGAACTCTCCGAGCAGGTTGTTCCTAATGACCTGAGAGCTCTTGCTGATAGTTTCATGGCAAAGGTGAATCAGGGACTAGAGCAGGCCCATGGAACTGGCTATGGTGGCAGTGGGTTCAAATTTAACGAGGAAGAAGATGAAGTGAGGAGGGCAGCGAAGAAAGCGCAAGCTAAAGAATATGGTTTTGAGGAGGACAAATCAGATTCAGAAGATGAAGATGATGGTGTCCGGAAGGCAGGTGGCGATATCTCACAGCAGGCAGCTTTGGCCCAGATAGCTGCTATAGCAGCTGCCACTAAAGTCAGTGCAGCTTCAATCACAACTCCCAGCTCTGCCGCTCAGCTACTTCCAAATGGCGGATTACCTGTTTCTTTGCCCGGTGTTCTTGGGCTCACAATTCCAGGAACAATGGCAGTTATACCTGGTGCAACATTGCCTGCAGTTACTAATGACGGGGCCGCTGCAAGGGCAGCATTAGCAGCTGCAATGAACTTGCAACACAACCTAGCCAAGATTCAAGCTAGTGCAATACCTGAACACTATGAAGCCGAATTGGAAATTAACGATTTCCCACAGAATGCTCGATGGAAGGTAACACACAAGGAGACCTTAGGCCCAATTTCAGAGTGGACTGGAGCTGCTATTACTACTAGGGGACAGTTCTTTCCACCTGGCAAGATTGCTGGACCTGGAGAACGCAAGCTTTACTTGTTCATTGAAGGTCCTACCGAACAATCTGTTAAGAGAGCTAAAGCTGAGTTAAAACGTGTCCTTGAGGACATTACAAACCAAACATTGTCACTTCCCGGTGGATCACAACCAGGCAGATACTCGGTTGTTTAA

Protein sequence

MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEKRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDSTDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNARPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRYSVV

Homology

[Close]

BLAST of Lsi04G024240 vs. Swiss-Prot
Match: RH42_ARATH (DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2)

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 799/1154 (69.24%), Postives = 937/1154 (81.20%), Query Frame = 1


Query: 2    EEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQQ 61
            E+ R K R    D      RD D ER+K +  +R R +  +DR  RRSER KS DSE+  
Sbjct: 46   EKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDV 105

Query: 62   YEREKEKLKRDKDKTRS-RDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEK 121
             E ++   +R  +K R  R+ ERDR +DR++DR++E  +DKE R REK R++ +ERE+E+
Sbjct: 106  EEEDERDKRRVNEKERGHREHERDRGKDRKRDREREERKDKE-REREKDRER-REREREE 165

Query: 122  RERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDST 181
            RE+ R KERE+RER  ED ERDR      RERE++R   R+++R + REV ++ SD+D  
Sbjct: 166  REKERVKERERRER--EDGERDR------REREKERGSRRNRERERSREVGNEESDDD-V 225

Query: 182  DHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENEQ 241
                KRRR++  + +  E    + +   H E+SP+ KS ED  +K E K TREEELE+EQ
Sbjct: 226  KRDLKRRRKEGGERKEKEREKSVGRSSRH-EDSPKRKSVEDNGEKKEKK-TREEELEDEQ 285

Query: 242  RRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNAR 301
            ++LDEE+EKRRRRVQEWQ+ +R KEEA+ + +G+ + +EPK+GK WTLEGESDDE  +  
Sbjct: 286  KKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKAWTLEGESDDEEGHPE 345

Query: 302  PP-ETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSM 361
               ET+MDVDE  KP  DG+   VD  N  E AA   +   +G   ++EIDPLDAFMN+M
Sbjct: 346  EKSETEMDVDEETKPENDGDAKMVDLEN--ETAATVSESGGDGAVDEEEIDPLDAFMNTM 405

Query: 362  VLPEVEKL-NKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTD 421
            VLPEVEK  N    P VND  + + K   K   +SG +P++   NK++GRII GEDSD+D
Sbjct: 406  VLPEVEKFCNGAPPPAVNDGTL-DSKMNGK---ESGDRPKKGF-NKALGRIIQGEDSDSD 465

Query: 422  YGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTL 481
            Y + +ND D   DEDD+EFMKRVKKTKAEKLS+VDHSK++Y+PFRKNFYIEVK+ISRMT 
Sbjct: 466  YSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQ 525

Query: 482  EEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMS 541
            EEV  YRK+LELK+HGKDVP+P+K WHQTGLTSKIL+ +KKLNYEKPMPIQ QALPI+MS
Sbjct: 526  EEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS 585

Query: 542  GRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKF 601
            GRDCIG+AKTGSGKTL FVLPMLRHIKDQ PV  GDGPIGL+MAPTRELVQQIHSDI+KF
Sbjct: 586  GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKF 645

Query: 602  SKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVM 661
            SK LG+RCVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS+GKITNLRRVT+LVM
Sbjct: 646  SKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVM 705

Query: 662  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV 721
            DEADRMFDMGFEPQITRI+QNIRP+RQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSV
Sbjct: 706  DEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV 765

Query: 722  VNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLS 781
            VNKDITQLVEVRPE++RFLRLLELLGEW EKGKIL+FV SQEKCDAL+RD++K  YPCLS
Sbjct: 766  VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLS 825

Query: 782  LHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVG 841
            LHG KDQTDRESTISDFK++VCNLLIATS+AARGLDVKELELV+NFD PNHYEDYVHRVG
Sbjct: 826  LHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 885

Query: 842  RTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAH 901
            RTGRAGRKGCA+TFI+E+D++YAPDLVKALELSEQ VP+DL+ALAD FM KV QG+EQAH
Sbjct: 886  RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAH 945

Query: 902  GTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKA-GGDIS-QQAA 961
            GTGYGGSGFKFNEEE+EVR+AAKKAQAKEYGFEEDKSDSEDE+D VRKA GG+IS QQA 
Sbjct: 946  GTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQAT 1005

Query: 962  LAQIAAIAAATKVSAAS-ITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPA 1021
             AQIAAIAAA K +AA+ ++ P +A QLL NGG   ++PGVL +T+P         TLP 
Sbjct: 1006 FAQIAAIAAAAKAAAAAPVSAPVTANQLLANGGGLAAMPGVLPVTVP---------TLP- 1065

Query: 1022 VTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPI 1081
              ++GA   AA+ AAMNLQHNLAKIQA A+PEHYEAELEINDFPQNARWKVTHKETLGPI
Sbjct: 1066 --SEGAGRAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPI 1125

Query: 1082 SEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTL- 1141
            SEWTGAAITTRGQF+P G+I GPGERKLYLFIEGP+E+SVK AKAELKRVLEDITNQ + 
Sbjct: 1126 SEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQAMS 1166

Query: 1142 SLPGGSQPGRYSVV 1149
            SLPGG+  GRYSV+
Sbjct: 1186 SLPGGAS-GRYSVL 1166

[Close]

BLAST of Lsi04G024240 vs. Swiss-Prot
Match: RH42_ORYSJ (DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica GN=Os08g0159900 PE=2 SV=1)

HSP 1 Score: 1206.4 bits (3120), Expect = 0.0e+00
Identity = 713/1097 (65.00%), Postives = 821/1097 (74.84%), Query Frame = 1


Query: 70   KRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEKRERAREKER 129
            +RDK+K R R   R   RDR ++R   R   +EDR  ++ RD+++ER   ++ER RE ER
Sbjct: 14   RRDKEKDRERSSSRHH-RDRDRERSSSRHHHREDRDDDRDRDRDRERRHREKERDRE-ER 73

Query: 130  EKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDSTDHGRKRRRR 189
            + RER  E+RE+++ERER RR  ERDRE     +R +RRE  ++  +ED  D  RKRRRR
Sbjct: 74   KARER--EEREKEKERERARRREERDRE-----ERSRRREAAAEEEEED-VDRDRKRRRR 133

Query: 190  DDDDHRAHESNSRMNKQRDHIEESPQEKS-EEDASDKNETKPTREEELENEQRRLDEEME 249
                H  H         RD   E P   + EE+  D  E +  R+++ E EQ++LDEEME
Sbjct: 134  SSHHHHHH---------RDAEPEGPASGAREEEVVDVEEAERRRQKKKEEEQKQLDEEME 193

Query: 250  KRRRRVQEWQKSRRLKEEADGDKQGEPNA--------------DEPKSGKTWTLEGESDD 309
             RRRR++EWQ+ +R +EE    +Q E                 D   +GK WTL+GE  D
Sbjct: 194  TRRRRIKEWQEMKRREEETKRREQEEAGVGTSAAAAAAPAEAEDGGNAGKKWTLDGEESD 253

Query: 310  EYDNARPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAG--DDEIDPL 369
            E  N    +   D   +    +D     VD  NG         D+ NG     +DEIDPL
Sbjct: 254  EEGNQEDGKKSDDNGGSGAGAMD-----VDVPNGG--------DNANGANAMDEDEIDPL 313

Query: 370  DAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPG 429
            DAFMNSMVLPEV KL  + A  V+D      K      D+ G K       K MGRII G
Sbjct: 314  DAFMNSMVLPEVAKLESMPAANVDDKNDKSAKDAVTNGDKKGPK-------KVMGRIIQG 373

Query: 430  EDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKE 489
            EDSD+DY D E+D    EDEDD+EFMKRVKKTKAEKL+IVDHSK+DYQPFRKNFYIEVK+
Sbjct: 374  EDSDSDYADDEDDEGGSEDEDDEEFMKRVKKTKAEKLAIVDHSKIDYQPFRKNFYIEVKD 433

Query: 490  ISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQA 549
            I++M  EEVAAYRKQLELK+HGKDVPKP+KTW Q+GLTSK+L+ IKKL +EKPM IQAQA
Sbjct: 434  ITKMAAEEVAAYRKQLELKVHGKDVPKPIKTWVQSGLTSKLLDTIKKLGFEKPMSIQAQA 493

Query: 550  LPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIH 609
            LPI+MSGRDCIGIAKTGSGKTLAFVLPMLRH+KDQ  VVPGDGPIGLIMAPTRELV QIH
Sbjct: 494  LPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVKDQPAVVPGDGPIGLIMAPTRELVVQIH 553

Query: 610  SDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRR 669
            SDIKKFSK LG+ CV +YGGSGVAQQISELKRGAEIVVCTPGRMIDILCTS+GKITNLRR
Sbjct: 554  SDIKKFSKALGINCVAIYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSSGKITNLRR 613

Query: 670  VTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQ 729
            VT+LVMDEADRMFDMGFEPQITRIVQN RPDRQTVLFSATFPRQVEILARKVL KPVEIQ
Sbjct: 614  VTFLVMDEADRMFDMGFEPQITRIVQNTRPDRQTVLFSATFPRQVEILARKVLTKPVEIQ 673

Query: 730  VGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKH 789
            VGGRSVVNKDITQLVEVRPENERF RLLELLGEW++KGKIL+FVHSQ+KCD+L +DL +H
Sbjct: 674  VGGRSVVNKDITQLVEVRPENERFFRLLELLGEWFDKGKILVFVHSQDKCDSLLKDLFQH 733

Query: 790  GYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYED 849
            GYPCLSLHG KDQTDREST++DFKSNVC+LLIATS+AARGLDVKELELV+N+DVPNHYED
Sbjct: 734  GYPCLSLHGGKDQTDRESTLADFKSNVCSLLIATSVAARGLDVKELELVVNYDVPNHYED 793

Query: 850  YVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQ 909
            YVHRVGRTGRAGRKG A+TFI+EE+ RYAPDLVKALELSEQ VP DL+ LAD FMAKV Q
Sbjct: 794  YVHRVGRTGRAGRKGFAVTFISEEEERYAPDLVKALELSEQAVPEDLKGLADRFMAKVKQ 853

Query: 910  GLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSE-DEDDGVRKAGGDI 969
            G EQAHGTGYGGSGFKFNEEEDE R++AKKAQA+EYG+EEDKSDS+ DE+ GVRKAGGD+
Sbjct: 854  GTEQAHGTGYGGSGFKFNEEEDEARKSAKKAQAREYGYEEDKSDSDSDEEGGVRKAGGDL 913

Query: 970  SQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGA 1029
            + QA  A  AA A     +A++    +    + P                     ++P A
Sbjct: 914  AAQAIAAAQAAAAMVAAKAASNANQQTQGTSVGP---------------------LLPLA 973

Query: 1030 TLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKET 1089
                  N+ A AR AL AA N+Q NLA+IQA A+PEHYEAELEINDFPQNARWK+THKET
Sbjct: 974  IASNTQNNEATAR-ALQAAFNIQQNLARIQAHAVPEHYEAELEINDFPQNARWKITHKET 1033

Query: 1090 LGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITN 1149
            LGPI EWTGAAITTRG FFP GKI G  ERKLYLFIEGPTE SVK+AKAELKRVLED  N
Sbjct: 1034 LGPIQEWTGAAITTRGTFFPQGKIVGANERKLYLFIEGPTELSVKKAKAELKRVLEDCAN 1049

[Close]

BLAST of Lsi04G024240 vs. Swiss-Prot
Match: RH45_ARATH (DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana GN=RH45 PE=3 SV=1)

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 688/1091 (63.06%), Postives = 822/1091 (75.34%), Query Frame = 1


Query: 60   QQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKE 119
            ++ +  KE  ++D+D+++  +  RD T  R   R K  D ++E+R R +   K  + E+E
Sbjct: 3    EKSKSRKENDRKDRDRSKKENGRRDTTEMR--SRVKRCDSEEEERIRIRRDRKSSDFEEE 62

Query: 120  KRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDE-D 179
            + ER  ++  E + R + +R+RDR +  +R    R+REKE+ + ++K+     DC++E D
Sbjct: 63   EYERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESD 122

Query: 180  STDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELEN 239
                G KR+R +   H                             D +  K TR+E++E+
Sbjct: 123  DVKCGLKRKRTERSRH----------------------------GDDDVEKKTRDEQVED 182

Query: 240  EQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDN 299
            EQ++L EE+EKRRRRVQEWQ+ +R  EEA  + +G      P++GK WTL+GESDDE  +
Sbjct: 183  EQKQLAEEVEKRRRRVQEWQELKRQNEEAQIESKG------PETGKAWTLDGESDDEVKS 242

Query: 300  ARPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNS 359
                +++MDVD + K    G+   V   + NE A    ++  +  A +DEIDPLDAFMN+
Sbjct: 243  ----DSEMDVDRDTKLENGGDAKMVA--SENETAVTVSENGGDRAADEDEIDPLDAFMNT 302

Query: 360  MVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTD 419
            MVLPEVEKL+ +       D I + K   K   ++G + ++  +  ++GRII GEDSD+D
Sbjct: 303  MVLPEVEKLSNIVI-----DGILDFKMNGK---ETGDQAKKGFNKAALGRIIQGEDSDSD 362

Query: 420  YGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTL 479
            Y + ++D D   DEDD+EFMKRVKKTKAEKLS+VDHSK++Y+PFRKNFYIEVK+ISRMT 
Sbjct: 363  YSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQ 422

Query: 480  EEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMS 539
            + V AYRK+LELK+HGKDVP+P++ WHQTGLTSKIL+ +KKLNYEKPMPIQAQALPI+MS
Sbjct: 423  DAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMS 482

Query: 540  GRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKF 599
            GRDCIG+AKTGSGKTL FVLPMLRHIKDQ PV  GDGPIGL+MAPTRELVQQI+SDI+KF
Sbjct: 483  GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKF 542

Query: 600  SKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVM 659
            SK LG+ CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS+GKITNLRRVTYLVM
Sbjct: 543  SKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVM 602

Query: 660  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV 719
            DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSV
Sbjct: 603  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV 662

Query: 720  VNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLS 779
            VNKDITQLVE+RPE+ERF RLLELLGEWYEKGK+L+FV SQEK                 
Sbjct: 663  VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEK----------------- 722

Query: 780  LHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVG 839
                        +ISDFKS+VCNLLIATS+AARGLDVKELELV+NFD PNHYEDYVHRVG
Sbjct: 723  ------------SISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 782

Query: 840  RTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAH 899
            RTGRAGRKGCA+TFI+E+D++YAPDLVKALELSEQ VP+D++A+A+ FMAKV QG+EQAH
Sbjct: 783  RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIEQAH 842

Query: 900  GTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQA-AL 959
            GTGYGGSGFKFNEEEDEVR+AAKKAQAKEYGFEE+KSDSEDE+D VRKAGGDISQQ   L
Sbjct: 843  GTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQQITL 902

Query: 960  AQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVT 1019
            AQIAAIA+A   +      P +A QLLPNGG   + PG     IP T             
Sbjct: 903  AQIAAIASAASKA------PVTANQLLPNGGGLATEPG-----IPPT------------- 962

Query: 1020 NDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISE 1079
             DGA   AA+ AA N+Q  LAKIQA AIPEHYEAELEINDFPQNARWKVTHKETLGPISE
Sbjct: 963  -DGAGRVAAMIAAANVQQYLAKIQADAIPEHYEAELEINDFPQNARWKVTHKETLGPISE 989

Query: 1080 WTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLP 1139
            W+GA+ITTRG+F+  G+I GP ERKLYLF+EGPTE SVK AKAELKRVLEDITNQT SLP
Sbjct: 1023 WSGASITTRGKFYEAGRIPGPEERKLYLFVEGPTEISVKTAKAELKRVLEDITNQTFSLP 989

Query: 1140 GGSQPGRYSVV 1149
            GG+Q GRYSV+
Sbjct: 1083 GGAQSGRYSVL 989

[Close]

BLAST of Lsi04G024240 vs. Swiss-Prot
Match: RH45_ORYSJ (DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica GN=Os08g0154200 PE=3 SV=2)

HSP 1 Score: 1114.0 bits (2880), Expect = 0.0e+00
Identity = 614/941 (65.25%), Postives = 716/941 (76.09%), Query Frame = 1


Query: 224  DKNETKPTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNAD----- 283
            D+ E++  R++ +E E++RLDEEME RRRRV+EWQ+ +RL+EE    ++ E  A      
Sbjct: 11   DEEESERRRQKMIEEEKKRLDEEMELRRRRVKEWQEQKRLEEEEAKRREQEAAAGAGTPA 70

Query: 284  -------EPKSGKTWTLEGESDDEYDNARPPETDMDVDENPKPLVDGEQVAVDFNNGNEA 343
                   +  +GK WTL+GE  DE       E   + +++     D   +  + N+ N A
Sbjct: 71   AAAGADGDSNAGKKWTLDGEESDEEGYK---EDSQNAEDDGGITAD---LPSEVNDANVA 130

Query: 344  AAPPLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSD 403
            A  P+++        DEIDPLDAFM+SMVLPEV KL    A         E        D
Sbjct: 131  A--PMEE--------DEIDPLDAFMSSMVLPEVAKLETAVAS-------MESMPASNMGD 190

Query: 404  QSGGKPQRRISN-------KSMGRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKT 463
            ++G   +  +SN       K+MGRI+ G+DSD+DY D ++D    +DEDD+EFMKRVKKT
Sbjct: 191  KNGKSAKDAVSNGDKKGQKKAMGRIMQGDDSDSDYDDDDDDEGGSKDEDDEEFMKRVKKT 250

Query: 464  KAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTW 523
            K EKL+IVDHSK++YQPFRKN YIEVK+I+ MT EEVA YRK LELK+HGKDVPKP+KTW
Sbjct: 251  KVEKLAIVDHSKIEYQPFRKNLYIEVKDITMMTGEEVATYRKNLELKVHGKDVPKPIKTW 310

Query: 524  HQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHI 583
             Q+GLTSK+L+ IKKL +EKPMPIQAQALPI+MSGRDCIGIAKTGSGKTLAFVLPMLRH+
Sbjct: 311  VQSGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHV 370

Query: 584  KDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKR 643
            KDQ PVVPGDGPIGLIMAPTRELV QIHSDIKKF+K LG+ CV +YGGSGVAQQISELKR
Sbjct: 371  KDQPPVVPGDGPIGLIMAPTRELVVQIHSDIKKFAKSLGINCVAIYGGSGVAQQISELKR 430

Query: 644  GAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDR 703
            GAEIVVCTPGRMIDILCTS+GKITNLRRVT+LVMDEADRMFDMGFEPQITRIVQN RPDR
Sbjct: 431  GAEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIVQNTRPDR 490

Query: 704  QTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLG 763
            QTVLFSA FPRQVEILARKVL KPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLG
Sbjct: 491  QTVLFSAIFPRQVEILARKVLTKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLG 550

Query: 764  EWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLI 823
            EW+++GKIL+FVHSQ+KCD+L +DL + GYPCLSLHG KDQTDREST++DFKSN      
Sbjct: 551  EWFDRGKILVFVHSQDKCDSLLKDLFQRGYPCLSLHGGKDQTDRESTLADFKSN------ 610

Query: 824  ATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDL 883
                         LELV+N+DVPNHYEDYVHRVGRTG AGRKG A+TFI++E+ RYAPDL
Sbjct: 611  -------------LELVVNYDVPNHYEDYVHRVGRTGHAGRKGFAVTFISDEEERYAPDL 670

Query: 884  VKALELSEQVVPNDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQ 943
             KALELSEQ VP DL+ LAD FMAKV QG EQAHGTGYGGSGFKFNEEEDE RR+AKKAQ
Sbjct: 671  AKALELSEQAVPQDLKGLADRFMAKVKQGTEQAHGTGYGGSGFKFNEEEDEARRSAKKAQ 730

Query: 944  AKEYGFEEDKSDSE-DEDDGVRKAGGDISQQAALAQIAAIAAATKVSAASITTPSSAAQL 1003
            A+EYG+EEDKSDS+ DE+ GVRKAGGD++ QA    IAA  AA  ++AA   + ++    
Sbjct: 731  AREYGYEEDKSDSDSDEEGGVRKAGGDLAAQA----IAAAQAAATLAAAKAASNANQQVQ 790

Query: 1004 LPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQAS 1063
              N G  +S+P V              A  P   N+ A AR AL AA+N+Q NLA+IQA 
Sbjct: 791  STNAGSLLSIPVV--------------ANAP---NNEATAR-ALQAALNIQQNLARIQAH 850

Query: 1064 AIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKL 1123
             +PEHYE EL+INDFPQNARWK+THKETLGPI +WT AAITTRG F P GKI G  ERKL
Sbjct: 851  VVPEHYEVELDINDFPQNARWKITHKETLGPIQDWTEAAITTRGTFIPQGKIVGANERKL 887

Query: 1124 YLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGR 1145
            YLFIEGPTE SVK+AK+ELKRVLED  N  L+LPG +Q G+
Sbjct: 911  YLFIEGPTELSVKKAKSELKRVLEDCANHALNLPGSAQTGK 887

[Close]

BLAST of Lsi04G024240 vs. Swiss-Prot
Match: DDX46_HUMAN (Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2)

HSP 1 Score: 672.9 bits (1735), Expect = 6.1e-192
Identity = 485/1112 (43.62%), Postives = 663/1112 (59.62%), Query Frame = 1


Query: 71   RDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEKRERAREKERE 130
            R +  +R R   R R+R     R K  D D+  R+R++ R +E+ R ++KR R+R ++R 
Sbjct: 9    RKRSASRGRSGSRSRSRSPSDKRSKRGD-DRRSRSRDRDRRRERSRSRDKR-RSRSRDR- 68

Query: 131  KRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDSTDHGRKRRRRD 190
            KR R    RERDR RER RR R RDR + R + R +R           S+  G K ++  
Sbjct: 69   KRLRRSRSRERDRSRER-RRSRSRDRRRSRSRSRGRRSR---------SSSPGNKSKKT- 128

Query: 191  DDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELEN-EQRRLDEEMEK 250
                   E+ SR  ++ D  E S ++K ++D  DK + K   E++  N +Q +L+EEM K
Sbjct: 129  -------ENRSRSKEKTDGGESSKEKKKDKD--DKEDEK---EKDAGNFDQNKLEEEMRK 188

Query: 251  RRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNARPPETDMDVD 310
            R+ RV++W++ +R K+  +   + +   +E K GK W+LE + DDE D   P E + + +
Sbjct: 189  RKERVEKWREEQR-KKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDD---PAEAEKEGN 248

Query: 311  ENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLNK 370
            E     ++GE+                            +DPLDA+M   V  EV+K N 
Sbjct: 249  E-----MEGEE----------------------------LDPLDAYMEE-VKEEVKKFN- 308

Query: 371  VEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTDYGDL-ENDADT 430
                      +  +K       +SG    + ++  +  + +   DSD   G+L END D 
Sbjct: 309  ----------MRSVKGGGGNEKKSGPTVTKVVTVVTTKKAV--VDSDKKKGELMENDQDA 368

Query: 431  LEDEDDDEFMKRVK-----KTKAEK-LSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVA 490
            +E   ++E +         +TK  K L  VDH K++Y+PFRKNFY+EV E+++M+ EEV 
Sbjct: 369  MEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVN 428

Query: 491  AYRKQLE-LKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRD 550
             +R ++E + + GK  PKP+K+W Q G++ KIL  +KK  YEKP PIQ QA+P +MSGRD
Sbjct: 429  VFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRD 488

Query: 551  CIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKV 610
             IGIAKTGSGKT+AF+LPM RHI DQ  +  G+GPI +IM PTREL  QI  + KKFSK 
Sbjct: 489  LIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKT 548

Query: 611  LGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEA 670
            LGLR V VYGG+G+++QI+ELKRGAEI+VCTPGRMID+L  ++G++TNLRRVTY+V+DEA
Sbjct: 549  LGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEA 608

Query: 671  DRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNK 730
            DRMFDMGFEPQ+ RIV N+RPDRQTV+FSATFPR +E LAR++L+KP+E+QVGGRSVV  
Sbjct: 609  DRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCS 668

Query: 731  DITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHG 790
            D+ Q V V  E ++FL+LLELLG + E G ++IFV  QE  D L +DL++  YPC+SLHG
Sbjct: 669  DVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHG 728

Query: 791  AKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTG 850
              DQ DR+S I+DFK+  C LL+ATS+AARGLDVK L LV+N+  PNHYEDYVHR GRTG
Sbjct: 729  GIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTG 788

Query: 851  RAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVN-QGLEQAHGT 910
            RAG KG A TFI E+ +RYA D++KALELS   VP DL  L   F  +   +G      +
Sbjct: 789  RAGNKGYAYTFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSS 848

Query: 911  GYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAA---- 970
            G+ G GFKF+E E  +    KK Q    G +    DS+DED  V     DI +Q      
Sbjct: 849  GFSGKGFKFDETEQALANERKKLQKAALGLQ----DSDDEDAAV-----DIDEQIESMFN 908

Query: 971  LAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTI-------PGTMAVIP 1030
              +     AA   S+    T  +A +L     L + +     L I         T A++ 
Sbjct: 909  SKKRVKDMAAPGTSSVPAPTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILR 968

Query: 1031 GATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIP----------EHYEAELEINDFP 1090
            G T+ A T         LA  +N + N   ++               + YE ELEINDFP
Sbjct: 969  GGTILAPTVSAKTIAEQLAEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFP 1028

Query: 1091 QNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAK 1149
            Q ARWKVT KE L  ISE++ AAIT RG +FPPGK    GERK+YL IE   E +V++AK
Sbjct: 1029 QTARWKVTSKEALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAK 1031

[Close]

BLAST of Lsi04G024240 vs. TrEMBL
Match: A0A0A0LPZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025140 PE=4 SV=1)

HSP 1 Score: 1948.7 bits (5047), Expect = 0.0e+00
Identity = 1071/1149 (93.21%), Postives = 1094/1149 (95.21%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEE- 60
            MEEGRSKSRRDDLD+PKKSHR+RDRERDKERNGDRGRDKEKRD       RE+S DSEE 
Sbjct: 1    MEEGRSKSRRDDLDEPKKSHRERDRERDKERNGDRGRDKEKRD-------RERSYDSEEL 60

Query: 61   QQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKE 120
             Q+EREKEK +RDKDKTR+RDDERDR RDRRK+R         DRAREKTRD      KE
Sbjct: 61   VQHEREKEKPRRDKDKTRNRDDERDRGRDRRKER---------DRAREKTRD------KE 120

Query: 121  KRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDS 180
            KRERAREKER+K         RDR+R+RERRERERDREKERDKDRRKRREVVS+ SDEDS
Sbjct: 121  KRERAREKERDK---------RDRDRDRERRERERDREKERDKDRRKRREVVSEYSDEDS 180

Query: 181  TDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENE 240
            T+HGRKRRRRDDDDHRAHESNSR+NKQRDH++ESP+EKSEEDA DKNETKPTREEELENE
Sbjct: 181  TEHGRKRRRRDDDDHRAHESNSRINKQRDHVDESPREKSEEDAFDKNETKPTREEELENE 240

Query: 241  QRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNA 300
            Q+RLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGE NADEPKSGKTWTLEGESDDEY+NA
Sbjct: 241  QKRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENA 300

Query: 301  RPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSM 360
            RP ETDMDVDEN KPLVDGEQ+AV+FNNGNEAAA P QDSI GDA DDEIDPLDAFMNSM
Sbjct: 301  RPTETDMDVDENSKPLVDGEQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSM 360

Query: 361  VLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTDY 420
            VLPEVEKLNKVE PTVNDDKI ELKSRDKPSDQSGGK QRRISNKSMGRIIPGEDSDTDY
Sbjct: 361  VLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDY 420

Query: 421  GDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE 480
            GDLEND DTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE
Sbjct: 421  GDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE 480

Query: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSG 540
            EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILE IKKLNYEKPMPIQAQALPIVMSG
Sbjct: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSG 540

Query: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600
            RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS
Sbjct: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600

Query: 601  KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660
            KV+GLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD
Sbjct: 601  KVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660

Query: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV 720
            EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVE+QVGGRSVV
Sbjct: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEVQVGGRSVV 720

Query: 721  NKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780
            NKDI QLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL
Sbjct: 721  NKDIAQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780

Query: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840
            HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR
Sbjct: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840

Query: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHG 900
            TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVP+DLRALADSFMAKVNQGLEQAHG
Sbjct: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHG 900

Query: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960
            TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ
Sbjct: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960

Query: 961  IAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTND 1020
            IAAIAAATKVSA SITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTM VIP ATLP VTND
Sbjct: 961  IAAIAAATKVSAVSITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTND 1020

Query: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080
            GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT
Sbjct: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080

Query: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1140
            GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG
Sbjct: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1118

Query: 1141 SQPGRYSVV 1149
            SQPGRYSVV
Sbjct: 1141 SQPGRYSVV 1118

[Close]

BLAST of Lsi04G024240 vs. TrEMBL
Match: M5WZQ0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000460mg PE=4 SV=1)

HSP 1 Score: 1583.9 bits (4100), Expect = 0.0e+00
Identity = 906/1174 (77.17%), Postives = 1025/1174 (87.31%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEK--RDRESRRSEREKSVDSE 60
            MEEG+ KSR++   + K+SHRDR RE  K+RNG+R RDK+K  RDR+SRRSEREKS DSE
Sbjct: 1    MEEGKHKSRKEG--ESKRSHRDRQRE--KQRNGERHRDKDKDKRDRDSRRSEREKSSDSE 60

Query: 61   EQQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREK 120
            ++ Y+REK +  RD D+TRSRDDER+RTRDR++++DKE+++++E RAREK +++E+ERE+
Sbjct: 61   DR-YDREKHR-DRDTDRTRSRDDERERTRDRKREKDKEKEKERE-RAREKEKERERERER 120

Query: 121  EK---RERAREKEREK-----RERIKEDRERDRE---RERERRERERDREKERDKDRR-- 180
            E+   +ER REKEREK     RER +E RER+RE   RERE+RERER+REK+RD++RR  
Sbjct: 121  EREREKERDREKEREKEKEKERERERERREREREGEDREREKREREREREKDRDRERRIR 180

Query: 181  ---KRREVVSDCSDEDSTDHGRKRRRRDDDDHRAHE---SNSRMNKQRDHIEESPQEKSE 240
               +RR++ +D +D+D  + GRKR R+D+++++  E   S+SR N+ RD  + SP++KS+
Sbjct: 181  ERERRRDIDTDDTDDDVRERGRKRHRKDENEYKEKERERSSSRSNRHRDDGDGSPRKKSD 240

Query: 241  EDASDKNETKPTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADE 300
            ED S K E +PTREEELE+EQR+LDEEMEKRRRRVQEWQ+ +R KEE++ +K+GE + DE
Sbjct: 241  EDDSVKKEKQPTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESEREKRGEGDVDE 300

Query: 301  PKSGKTWTLEGESDDE-YDNARPPETDMDVDENPKPLVD----GEQVAVDFNNGNEAAAP 360
            PKSGK WTLEGESDDE   +    E DMDVD     L D    G+ + VD  + NE  A 
Sbjct: 301  PKSGKAWTLEGESDDEEVPSLGKSERDMDVDGEDN-LTDREAGGDAMVVD--SENETDAL 360

Query: 361  PLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSG 420
             LQ+  +   GD+E+DPLDAFMNSMVLPEVEKLN    P++ D+K     ++DK  D S 
Sbjct: 361  TLQNGADDAVGDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEK-----NKDKKDDLSN 420

Query: 421  GKPQRRISNKSMGRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDH 480
            G+  RR SNKSMGRIIPGEDSD+DYGDLEND D LEDE DDEF+KRVKKTKAEKLS+VDH
Sbjct: 421  GEQPRRGSNKSMGRIIPGEDSDSDYGDLENDDDPLEDEGDDEFIKRVKKTKAEKLSVVDH 480

Query: 481  SKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKIL 540
            SK+DY PFRKNFYIEVKEISRMT E+V AYRK+LELKIHGKDVPKP+KTWHQTGLTSKIL
Sbjct: 481  SKIDYDPFRKNFYIEVKEISRMTPEQVGAYRKELELKIHGKDVPKPIKTWHQTGLTSKIL 540

Query: 541  EMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGD 600
            E IKKLNYEKPMPIQAQA+P++MSGRDCIGIAKTGSGKT+AFVLPMLRHIKDQ PVV GD
Sbjct: 541  ETIKKLNYEKPMPIQAQAVPVIMSGRDCIGIAKTGSGKTVAFVLPMLRHIKDQPPVVAGD 600

Query: 601  GPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG 660
            GPIGLIMAPTRELVQQIHSDIKKF+KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG
Sbjct: 601  GPIGLIMAPTRELVQQIHSDIKKFTKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG 660

Query: 661  RMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 720
            RMIDILCTS G+ITNLRRVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP
Sbjct: 661  RMIDILCTSGGRITNLRRVTYLVVDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 720

Query: 721  RQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILI 780
            RQVE+LARKVLNKPVEIQVGGRSVVNKDI QLVEVR ENERFLRLLELLGEWYEKGKILI
Sbjct: 721  RQVEVLARKVLNKPVEIQVGGRSVVNKDIAQLVEVRLENERFLRLLELLGEWYEKGKILI 780

Query: 781  FVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLD 840
            FV SQ KCDALFRDLL+HGYPCLSLHG KDQTDRESTI+DFKSNVCNLLIATS+AARGLD
Sbjct: 781  FVESQNKCDALFRDLLRHGYPCLSLHGGKDQTDRESTITDFKSNVCNLLIATSVAARGLD 840

Query: 841  VKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQV 900
            VKELELVINFD PNHYEDYVHRVGRTGRAGRKGCAITF++EED+RYAPDLVKALELSEQV
Sbjct: 841  VKELELVINFDSPNHYEDYVHRVGRTGRAGRKGCAITFVSEEDARYAPDLVKALELSEQV 900

Query: 901  VPNDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDK 960
            VP+DL++LADSF AKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFE+DK
Sbjct: 901  VPDDLKSLADSFTAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEDDK 960

Query: 961  SDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLP 1020
            SDSEDED+G+RKAGGDISQQAALAQIAAIAAA+K S ASI TP  AAQLLPN GLPVSLP
Sbjct: 961  SDSEDEDEGIRKAGGDISQQAALAQIAAIAAASKGSTASIQTPVPAAQLLPNSGLPVSLP 1020

Query: 1021 GVLGLTIPGTMAVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELE 1080
            GVLGLT+PGT A + G  LP V NDGAA  AA+AAAMNLQHNLAKIQA A+PEHYEAELE
Sbjct: 1021 GVLGLTLPGTAAAVAGTGLPVVGNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELE 1080

Query: 1081 INDFPQNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQS 1140
            INDFPQNARWKVTHKETLGPISEWTGAAITTRGQ+FPPGK+AGPG+RKLYLFIEGPTEQS
Sbjct: 1081 INDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPTEQS 1140

Query: 1141 VKRAKAELKRVLEDITNQTLSLPGGSQPGRYSVV 1149
            VKRAKAELKRVLEDI+NQ LSLPGG+Q GRY V+
Sbjct: 1141 VKRAKAELKRVLEDISNQALSLPGGAQQGRYQVL 1159

[Close]

BLAST of Lsi04G024240 vs. TrEMBL
Match: W9QWD8_9ROSA (DEAD-box ATP-dependent RNA helicase 42 OS=Morus notabilis GN=L484_024795 PE=4 SV=1)

HSP 1 Score: 1568.5 bits (4060), Expect = 0.0e+00
Identity = 903/1163 (77.64%), Postives = 1010/1163 (86.84%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQ 60
            MEE + KSRR+  +D ++SHR       KERNG+R RDK  R RESRRSER++S DS + 
Sbjct: 1    MEEVKHKSRREASEDTRRSHRA------KERNGERHRDK--RGRESRRSERDRSSDSNDS 60

Query: 61   QYEREKEKLKRDKDKTRSRD-DERDRTRDRRKDRDKERDRDKEDRAREKTR-DKEKEREK 120
             Y+R ++   R+KDK + RD D +++ RDR + R+K+RDRD+ DR REK + D+E+E+EK
Sbjct: 61   -YDRGRD---REKDKHKDRDKDRKEKERDRERGREKKRDRDR-DREREKDKEDREREKEK 120

Query: 121  EKRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRK-------RREVV 180
            EKRERA+EKERE+ +R +E  ++DRERERERRERER+R+KER+++RR        RRE+ 
Sbjct: 121  EKRERAKEKEREREKREREREDKDRERERERRERERERDKERERERRSTRERENHRREID 180

Query: 181  SDCSDED-STDHGRKRRRRDDDDHRAHESNS-RMNKQRDHIEESPQEKSEEDASDKNETK 240
            SD SD++   +  +KRRRRDDDD++  E    R + +R   EESP+ +S ED  DK   K
Sbjct: 181  SDDSDDNVREERDKKRRRRDDDDYKEKERERVRSSGKR---EESPKSRSAEDDLDK---K 240

Query: 241  PTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLE 300
            PTREEELE EQ +LDEEMEKRRRRVQEWQ+ RR KEEA+ +KQGE NA+EPKSGKTWTLE
Sbjct: 241  PTREEELEEEQHKLDEEMEKRRRRVQEWQELRRKKEEAETEKQGEANAEEPKSGKTWTLE 300

Query: 301  GESDDE-YDNARPPETDMDVD--ENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGD 360
            GESDDE   +    ET M++D   NP   V  E +A+D  NG+  +A  LQ+ ++G +GD
Sbjct: 301  GESDDEEVPSTGKVETAMEIDGEANPNKGVTDE-MAIDSENGSAPSA--LQNGVDGTSGD 360

Query: 361  DEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSM 420
            +EIDPLDAFMNSMVLPEVEKLN    P   D K  +L ++DK  DQS  +P R+  NKSM
Sbjct: 361  EEIDPLDAFMNSMVLPEVEKLNNASEPASIDGKSLDL-NKDKKDDQSKDEPWRKGPNKSM 420

Query: 421  GRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNF 480
            GRIIPGEDS++DY D+END D LEDEDDDEFMKRVKKTKAEKLSIVDHSK+DY PFRKNF
Sbjct: 421  GRIIPGEDSESDYEDVENDGDPLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYIPFRKNF 480

Query: 481  YIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPM 540
            YIEVKEISRMT EEV+AYRKQLELK+HGKDVPKP+KTWHQTGLTSKILE I+KLNYEKPM
Sbjct: 481  YIEVKEISRMTPEEVSAYRKQLELKLHGKDVPKPMKTWHQTGLTSKILETIRKLNYEKPM 540

Query: 541  PIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRE 600
            PIQAQALP++MSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQ PVV GDGPIGLIMAPTRE
Sbjct: 541  PIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRE 600

Query: 601  LVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGK 660
            LVQQIHSD+KKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTS GK
Sbjct: 601  LVQQIHSDVKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGK 660

Query: 661  ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLN 720
            ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR+VLN
Sbjct: 661  ITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARRVLN 720

Query: 721  KPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALF 780
            KPVEIQVGGRSVVNKDITQLVEVR ENERFLRLLELLGEWYEKGKILIFVHSQEKCDALF
Sbjct: 721  KPVEIQVGGRSVVNKDITQLVEVRHENERFLRLLELLGEWYEKGKILIFVHSQEKCDALF 780

Query: 781  RDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDV 840
            +DLL+HGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDV
Sbjct: 781  KDLLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDV 840

Query: 841  PNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSF 900
            PNHYEDYVHRVGRTGRAGRKGCAITFI+E+D+RYAPDLVKALELSEQVVP+DL+ALAD F
Sbjct: 841  PNHYEDYVHRVGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQVVPDDLKALADGF 900

Query: 901  MAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRK 960
            MAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDED GVRK
Sbjct: 901  MAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDGGVRK 960

Query: 961  AGGDISQQAALAQIAAIAAATKVSAASIT-TPSSAAQLLPNGGLPVSLPGVLGLTIPGTM 1020
            AGG+ISQQAALAQIAA+AAA+K +A +   TP    QLLPNGGLPVSLPGVLGL++PGT 
Sbjct: 961  AGGEISQQAALAQIAALAAASKAAATTANPTPIVPGQLLPNGGLPVSLPGVLGLSLPGTA 1020

Query: 1021 AVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWK 1080
            AV+PG  LP   NDGAA  AA+AAA+NLQHNLAKIQA A+PEHYEAELEINDFPQNARWK
Sbjct: 1021 AVVPGTGLPLAANDGAARAAAIAAAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWK 1080

Query: 1081 VTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRV 1140
            VTHKETLGPISEWTGAAITTRGQ+FPPGK+ GPGERKLYLFIEGP+EQSVK+AKAELKRV
Sbjct: 1081 VTHKETLGPISEWTGAAITTRGQYFPPGKVTGPGERKLYLFIEGPSEQSVKKAKAELKRV 1140

Query: 1141 LEDITNQTLSLPGGSQPGRYSVV 1149
            LEDI++Q LSLPGG+QPG+YSVV
Sbjct: 1141 LEDISHQALSLPGGNQPGKYSVV 1140

[Close]

BLAST of Lsi04G024240 vs. TrEMBL
Match: A0A067FDM7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001264mg PE=4 SV=1)

HSP 1 Score: 1548.9 bits (4009), Expect = 0.0e+00
Identity = 875/1141 (76.69%), Postives = 979/1141 (85.80%), Query Frame = 1


Query: 19   SHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQQYEREKEKLKRDKDKTRS 78
            SHRDRDRE++KE++ ++          SRRSERE+S DS+E ++++EKEK          
Sbjct: 4    SHRDRDREKEKEKHREK----------SRRSEREQSTDSDEDKHDKEKEK---------- 63

Query: 79   RDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEKRERAREKEREKRERIKED 138
               ++ R RDRR+DRD++RDR+KE R  ++ R +EKERE+EKR+R RE    +RER +E 
Sbjct: 64   ---DKHRDRDRRRDRDRDRDREKE-REEKRERAREKEREREKRDREREDRERERERERER 123

Query: 139  RERDRERERERRERERDREKERDK---DRRKRREVVSDCSDEDSTDHGRKRRRRDDDDHR 198
            RERDRERE+  RER+RD+EK+R++   DR KRR+V SD SDED  D  RKRRRR DDDH+
Sbjct: 124  RERDREREKRERERDRDKEKDRERKSRDREKRRKVESDDSDEDK-DRDRKRRRRHDDDHK 183

Query: 199  AH---ESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENEQRRLDEEMEKRRR 258
                  S SR N+ RD  +ESP+EK  ED SDK E K TREEELE+EQR+LDEEMEKRRR
Sbjct: 184  ERVRERSLSRSNRHRDENDESPREKLVEDDSDKKEKK-TREEELEDEQRKLDEEMEKRRR 243

Query: 259  RVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGE--SDDEYDNARPPETDMDVDE 318
            RVQEWQ+ +R KEE++ + +G+ N +EPK+G+ WTL+ E   D+E       ETDMD DE
Sbjct: 244  RVQEWQELKRKKEESERENRGDANVEEPKAGRNWTLDREDSDDEEVPQTGKSETDMDADE 303

Query: 319  NPKPLVD--GEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLN 378
             PKP  +  G+ + VD + G  +AAP LQ    G A D++IDPLDAFMNSMVLPEVEKL 
Sbjct: 304  EPKPSENQVGDAMLVDSDGG--SAAPALQ---IGAAEDEDIDPLDAFMNSMVLPEVEKLK 363

Query: 379  KVEAPTVNDDKIAELKSRDKPSD-QSGGKPQRRISNKSMGRIIPGEDSDTDYGDLENDAD 438
                P+  D    E K  D+  D +S G+  ++ SNKS+GRIIPGEDSD+DYGDLEND  
Sbjct: 364  NTVEPSFTDGNNVESKKMDRKGDRRSNGEQPKKSSNKSLGRIIPGEDSDSDYGDLENDEK 423

Query: 439  TLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQ 498
             LEDEDDDEFMKRVKKTKAEKLSIVDHSK+DYQPFRKNFYIEVKEI+RMT EEV+AYRKQ
Sbjct: 424  PLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYQPFRKNFYIEVKEIARMTPEEVSAYRKQ 483

Query: 499  LELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAK 558
            LELKIHGKDVPKP+KTWHQTGLTSKI+E I+KLNYEKPMPIQAQALP++MSGRDCIG+AK
Sbjct: 484  LELKIHGKDVPKPIKTWHQTGLTSKIMETIRKLNYEKPMPIQAQALPVIMSGRDCIGVAK 543

Query: 559  TGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCV 618
            TGSGKTLAFVLPMLRHIKDQ PV  GDGP+GLIMAPTRELVQQIHSDI+KF+KV+G+RCV
Sbjct: 544  TGSGKTLAFVLPMLRHIKDQPPVAAGDGPVGLIMAPTRELVQQIHSDIRKFAKVMGVRCV 603

Query: 619  PVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDM 678
            PVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS GKITNLRRVTYLVMDEADRMFDM
Sbjct: 604  PVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDM 663

Query: 679  GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV 738
            GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV
Sbjct: 664  GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV 723

Query: 739  EVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD 798
            EVRPE++RFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD
Sbjct: 724  EVRPESDRFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD 783

Query: 799  RESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG 858
            RESTISDFKSNVCNLLIATS+AARGLDVKELELVINFD PNHYEDYVHRVGRTGRAGRKG
Sbjct: 784  RESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDAPNHYEDYVHRVGRTGRAGRKG 843

Query: 859  CAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHGTGYGGSGF 918
            CAITFI+EED++Y+PDLVKALELSEQVVP+DL+ALADSFMAKVNQGLEQAHGTGYGGSGF
Sbjct: 844  CAITFISEEDAKYSPDLVKALELSEQVVPDDLKALADSFMAKVNQGLEQAHGTGYGGSGF 903

Query: 919  KFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAAT 978
            KFNEEEDE R+AAKKAQAKEYGFEEDKSDS+DED+G+RKAGGDISQQ ALA+I+AIAAA+
Sbjct: 904  KFNEEEDEKRKAAKKAQAKEYGFEEDKSDSDDEDEGIRKAGGDISQQDALAKISAIAAAS 963

Query: 979  KVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTNDGAAARAAL 1038
            K S AS+ TP SAAQLLPN GLP+SLPGVLGL+IPG    +    LP V NDGAA  AAL
Sbjct: 964  KAS-ASMPTPISAAQLLPNAGLPISLPGVLGLSIPGAAPTVSATGLPVVPNDGAARAAAL 1023

Query: 1039 AAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG 1098
            AAA+NLQHNLAKIQA A+PEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG
Sbjct: 1024 AAAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG 1083

Query: 1099 QFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRYSV 1149
            Q+FPP +IAGPGERKLYLFIEGPTEQSVKRAKAELKRVLED TNQ LSLPGG+QPGRYSV
Sbjct: 1084 QYFPPSRIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTNQALSLPGGAQPGRYSV 1112

[Close]

BLAST of Lsi04G024240 vs. TrEMBL
Match: V4U8B7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004206mg PE=4 SV=1)

HSP 1 Score: 1547.3 bits (4005), Expect = 0.0e+00
Identity = 875/1141 (76.69%), Postives = 976/1141 (85.54%), Query Frame = 1


Query: 19   SHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQQYEREKEKLKRDKDKTRS 78
            SHRDRDRE++KE++ ++          SRRSERE+S DS+E ++++EKEK     DK R 
Sbjct: 4    SHRDRDREKEKEKHREK----------SRRSEREQSTDSDEDKHDKEKEK-----DKHRD 63

Query: 79   RDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEKRERAREKEREKRERIKED 138
            RD  RDR RDR K+R+++R+R +E           KERE+EKR+R RE    +RER +E 
Sbjct: 64   RDRRRDRDRDREKEREEKRERARE-----------KEREREKRDREREDRERERERERER 123

Query: 139  RERDRERERERRERERDREKERDK---DRRKRREVVSDCSDEDSTDHGRKRRRRDDDDHR 198
            RERDRERE+  RER+RD+EK+R++   DR KRR+V SD SDED  D  RKRRRR DDDH+
Sbjct: 124  RERDREREKRERERDRDKEKDRERKSRDREKRRKVESDDSDEDK-DRDRKRRRRHDDDHK 183

Query: 199  AH---ESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENEQRRLDEEMEKRRR 258
                  S SR N+ RD  +ESP+EK  ED SDK E K TREEELE+EQR+LDEEMEKRRR
Sbjct: 184  ERVRERSLSRSNRHRDENDESPREKLVEDDSDKKEKK-TREEELEDEQRKLDEEMEKRRR 243

Query: 259  RVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGE--SDDEYDNARPPETDMDVDE 318
            RVQEWQ+ +R KEE++ + +G+ N +EPK+G+ WTL+ E   D+E       ETDMD DE
Sbjct: 244  RVQEWQELKRKKEESERENRGDANVEEPKAGRNWTLDREDSDDEEVPQTGKSETDMDADE 303

Query: 319  NPKPLVD--GEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLN 378
             PKP  +  G+ + VD + G  +AAP LQ    G A D++IDPLDAFMNSMVLPEVEKL 
Sbjct: 304  EPKPSENQVGDAMLVDSDGG--SAAPALQ---IGAAEDEDIDPLDAFMNSMVLPEVEKLQ 363

Query: 379  KVEAPTVNDDKIAELKSRDKPSD-QSGGKPQRRISNKSMGRIIPGEDSDTDYGDLENDAD 438
                P+  D    E K  D+  D +S G+  ++ SNKS+GRIIPGEDSD+DYGDLEND  
Sbjct: 364  NTVEPSFTDGNNVESKKMDRKGDRRSNGEQPKKSSNKSLGRIIPGEDSDSDYGDLENDEK 423

Query: 439  TLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQ 498
             LEDEDDDEFMKRVKKTKAEKLSIVDHSK+DYQPFRKNFYIEVKEI+RMT EEV+AYRKQ
Sbjct: 424  PLEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYQPFRKNFYIEVKEIARMTPEEVSAYRKQ 483

Query: 499  LELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAK 558
            LELKIHGKDVPKP+KTWHQTGLTSKI+E I+KLNYEKPMPIQAQALP++MSGRDCIG+AK
Sbjct: 484  LELKIHGKDVPKPIKTWHQTGLTSKIMETIRKLNYEKPMPIQAQALPVIMSGRDCIGVAK 543

Query: 559  TGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCV 618
            TGSGKTLAFVLPMLRHIKDQ PV  GDGP+GLIMAPTRELVQQIHSDI+KF+KV+G+RCV
Sbjct: 544  TGSGKTLAFVLPMLRHIKDQPPVAAGDGPVGLIMAPTRELVQQIHSDIRKFAKVMGVRCV 603

Query: 619  PVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDM 678
            PVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS GKITNLRRVTYLVMDEADRMFDM
Sbjct: 604  PVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSGGKITNLRRVTYLVMDEADRMFDM 663

Query: 679  GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV 738
            GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV
Sbjct: 664  GFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVVNKDITQLV 723

Query: 739  EVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD 798
            EVRPE++RFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD
Sbjct: 724  EVRPESDRFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTD 783

Query: 799  RESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKG 858
            RESTISDFKSNVCNLLIATS+AARGLDVKELELVINFD PNHYEDYVHRVGRTGRAGRKG
Sbjct: 784  RESTISDFKSNVCNLLIATSVAARGLDVKELELVINFDAPNHYEDYVHRVGRTGRAGRKG 843

Query: 859  CAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHGTGYGGSGF 918
            CAITFI+EED++Y+PDLVKALELSEQVVP+DL+ALADSFMAKVNQGLEQAHGTGYGGSGF
Sbjct: 844  CAITFISEEDAKYSPDLVKALELSEQVVPDDLKALADSFMAKVNQGLEQAHGTGYGGSGF 903

Query: 919  KFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQIAAIAAAT 978
            KFNEEEDE R+AAKKAQAKEYGFEEDKSDS+DED+G+RKAGGDISQQ ALA+I+AIAAA+
Sbjct: 904  KFNEEEDEKRKAAKKAQAKEYGFEEDKSDSDDEDEGIRKAGGDISQQDALAKISAIAAAS 963

Query: 979  KVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTNDGAAARAAL 1038
            K S AS+ TP SAAQLLPN GLP+SLPGVLGL+IPG    +    LP V NDGAA  AAL
Sbjct: 964  KAS-ASMPTPISAAQLLPNAGLPISLPGVLGLSIPGAAPTVSATGLPVVPNDGAARAAAL 1023

Query: 1039 AAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG 1098
            AAA+NLQHNLAKIQA A+PEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG
Sbjct: 1024 AAAINLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPISEWTGAAITTRG 1083

Query: 1099 QFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGGSQPGRYSV 1149
            Q+FPP +IAGPGERKLYLFIEGPTEQSVKRAKAELKRVLED TNQ LSLPGG+QPGRYSV
Sbjct: 1084 QYFPPSRIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDFTNQALSLPGGAQPGRYSV 1110

[Close]

BLAST of Lsi04G024240 vs. TAIR10
Match: AT1G20920.1 (AT1G20920.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 1355.9 bits (3508), Expect = 0.0e+00
Identity = 799/1154 (69.24%), Postives = 937/1154 (81.20%), Query Frame = 1


Query: 2    EEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQQ 61
            E+ R K R    D      RD D ER+K +  +R R +  +DR  RRSER KS DSE+  
Sbjct: 46   EKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDV 105

Query: 62   YEREKEKLKRDKDKTRS-RDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEK 121
             E ++   +R  +K R  R+ ERDR +DR++DR++E  +DKE R REK R++ +ERE+E+
Sbjct: 106  EEEDERDKRRVNEKERGHREHERDRGKDRKRDREREERKDKE-REREKDRER-REREREE 165

Query: 122  RERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDST 181
            RE+ R KERE+RER  ED ERDR      RERE++R   R+++R + REV ++ SD+D  
Sbjct: 166  REKERVKERERRER--EDGERDR------REREKERGSRRNRERERSREVGNEESDDD-V 225

Query: 182  DHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENEQ 241
                KRRR++  + +  E    + +   H E+SP+ KS ED  +K E K TREEELE+EQ
Sbjct: 226  KRDLKRRRKEGGERKEKEREKSVGRSSRH-EDSPKRKSVEDNGEKKEKK-TREEELEDEQ 285

Query: 242  RRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNAR 301
            ++LDEE+EKRRRRVQEWQ+ +R KEEA+ + +G+ + +EPK+GK WTLEGESDDE  +  
Sbjct: 286  KKLDEEVEKRRRRVQEWQELKRKKEEAESESKGDADGNEPKAGKAWTLEGESDDEEGHPE 345

Query: 302  PP-ETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSM 361
               ET+MDVDE  KP  DG+   VD  N  E AA   +   +G   ++EIDPLDAFMN+M
Sbjct: 346  EKSETEMDVDEETKPENDGDAKMVDLEN--ETAATVSESGGDGAVDEEEIDPLDAFMNTM 405

Query: 362  VLPEVEKL-NKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTD 421
            VLPEVEK  N    P VND  + + K   K   +SG +P++   NK++GRII GEDSD+D
Sbjct: 406  VLPEVEKFCNGAPPPAVNDGTL-DSKMNGK---ESGDRPKKGF-NKALGRIIQGEDSDSD 465

Query: 422  YGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTL 481
            Y + +ND D   DEDD+EFMKRVKKTKAEKLS+VDHSK++Y+PFRKNFYIEVK+ISRMT 
Sbjct: 466  YSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQ 525

Query: 482  EEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMS 541
            EEV  YRK+LELK+HGKDVP+P+K WHQTGLTSKIL+ +KKLNYEKPMPIQ QALPI+MS
Sbjct: 526  EEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS 585

Query: 542  GRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKF 601
            GRDCIG+AKTGSGKTL FVLPMLRHIKDQ PV  GDGPIGL+MAPTRELVQQIHSDI+KF
Sbjct: 586  GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKF 645

Query: 602  SKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVM 661
            SK LG+RCVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS+GKITNLRRVT+LVM
Sbjct: 646  SKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVM 705

Query: 662  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV 721
            DEADRMFDMGFEPQITRI+QNIRP+RQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSV
Sbjct: 706  DEADRMFDMGFEPQITRIIQNIRPERQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV 765

Query: 722  VNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLS 781
            VNKDITQLVEVRPE++RFLRLLELLGEW EKGKIL+FV SQEKCDAL+RD++K  YPCLS
Sbjct: 766  VNKDITQLVEVRPESDRFLRLLELLGEWSEKGKILVFVQSQEKCDALYRDMIKSSYPCLS 825

Query: 782  LHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVG 841
            LHG KDQTDRESTISDFK++VCNLLIATS+AARGLDVKELELV+NFD PNHYEDYVHRVG
Sbjct: 826  LHGGKDQTDRESTISDFKNDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 885

Query: 842  RTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAH 901
            RTGRAGRKGCA+TFI+E+D++YAPDLVKALELSEQ VP+DL+ALAD FM KV QG+EQAH
Sbjct: 886  RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDLKALADGFMVKVKQGIEQAH 945

Query: 902  GTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKA-GGDIS-QQAA 961
            GTGYGGSGFKFNEEE+EVR+AAKKAQAKEYGFEEDKSDSEDE+D VRKA GG+IS QQA 
Sbjct: 946  GTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEEDKSDSEDENDVVRKAGGGEISQQQAT 1005

Query: 962  LAQIAAIAAATKVSAAS-ITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPA 1021
             AQIAAIAAA K +AA+ ++ P +A QLL NGG   ++PGVL +T+P         TLP 
Sbjct: 1006 FAQIAAIAAAAKAAAAAPVSAPVTANQLLANGGGLAAMPGVLPVTVP---------TLP- 1065

Query: 1022 VTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPI 1081
              ++GA   AA+ AAMNLQHNLAKIQA A+PEHYEAELEINDFPQNARWKVTHKETLGPI
Sbjct: 1066 --SEGAGRAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTHKETLGPI 1125

Query: 1082 SEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTL- 1141
            SEWTGAAITTRGQF+P G+I GPGERKLYLFIEGP+E+SVK AKAELKRVLEDITNQ + 
Sbjct: 1126 SEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAELKRVLEDITNQAMS 1166

Query: 1142 SLPGGSQPGRYSVV 1149
            SLPGG+  GRYSV+
Sbjct: 1186 SLPGGAS-GRYSVL 1166

[Close]

BLAST of Lsi04G024240 vs. TAIR10
Match: AT3G09620.1 (AT3G09620.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 1155.2 bits (2987), Expect = 0.0e+00
Identity = 688/1091 (63.06%), Postives = 822/1091 (75.34%), Query Frame = 1


Query: 60   QQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKE 119
            ++ +  KE  ++D+D+++  +  RD T  R   R K  D ++E+R R +   K  + E+E
Sbjct: 3    EKSKSRKENDRKDRDRSKKENGRRDTTEMR--SRVKRCDSEEEERIRIRRDRKSSDFEEE 62

Query: 120  KRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDE-D 179
            + ER  ++  E + R + +R+RDR +  +R    R+REKE+ + ++K+     DC++E D
Sbjct: 63   EYERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESD 122

Query: 180  STDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELEN 239
                G KR+R +   H                             D +  K TR+E++E+
Sbjct: 123  DVKCGLKRKRTERSRH----------------------------GDDDVEKKTRDEQVED 182

Query: 240  EQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDN 299
            EQ++L EE+EKRRRRVQEWQ+ +R  EEA  + +G      P++GK WTL+GESDDE  +
Sbjct: 183  EQKQLAEEVEKRRRRVQEWQELKRQNEEAQIESKG------PETGKAWTLDGESDDEVKS 242

Query: 300  ARPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNS 359
                +++MDVD + K    G+   V   + NE A    ++  +  A +DEIDPLDAFMN+
Sbjct: 243  ----DSEMDVDRDTKLENGGDAKMVA--SENETAVTVSENGGDRAADEDEIDPLDAFMNT 302

Query: 360  MVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTD 419
            MVLPEVEKL+ +       D I + K   K   ++G + ++  +  ++GRII GEDSD+D
Sbjct: 303  MVLPEVEKLSNIVI-----DGILDFKMNGK---ETGDQAKKGFNKAALGRIIQGEDSDSD 362

Query: 420  YGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTL 479
            Y + ++D D   DEDD+EFMKRVKKTKAEKLS+VDHSK++Y+PFRKNFYIEVK+ISRMT 
Sbjct: 363  YSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSKIEYEPFRKNFYIEVKDISRMTQ 422

Query: 480  EEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMS 539
            + V AYRK+LELK+HGKDVP+P++ WHQTGLTSKIL+ +KKLNYEKPMPIQAQALPI+MS
Sbjct: 423  DAVNAYRKELELKVHGKDVPRPIQFWHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMS 482

Query: 540  GRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKF 599
            GRDCIG+AKTGSGKTL FVLPMLRHIKDQ PV  GDGPIGL+MAPTRELVQQI+SDI+KF
Sbjct: 483  GRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKF 542

Query: 600  SKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVM 659
            SK LG+ CVPVYGGSGVAQQISELKRG EIVVCTPGRMIDILCTS+GKITNLRRVTYLVM
Sbjct: 543  SKALGIICVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVM 602

Query: 660  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV 719
            DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVE LARKVLNKPVEIQVGGRSV
Sbjct: 603  DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVETLARKVLNKPVEIQVGGRSV 662

Query: 720  VNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLS 779
            VNKDITQLVE+RPE+ERF RLLELLGEWYEKGK+L+FV SQEK                 
Sbjct: 663  VNKDITQLVEIRPESERFSRLLELLGEWYEKGKVLVFVRSQEK----------------- 722

Query: 780  LHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVG 839
                        +ISDFKS+VCNLLIATS+AARGLDVKELELV+NFD PNHYEDYVHRVG
Sbjct: 723  ------------SISDFKSDVCNLLIATSVAARGLDVKELELVVNFDAPNHYEDYVHRVG 782

Query: 840  RTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAH 899
            RTGRAGRKGCA+TFI+E+D++YAPDLVKALELSEQ VP+D++A+A+ FMAKV QG+EQAH
Sbjct: 783  RTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQPVPDDVKAVAEGFMAKVKQGIEQAH 842

Query: 900  GTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQA-AL 959
            GTGYGGSGFKFNEEEDEVR+AAKKAQAKEYGFEE+KSDSEDE+D VRKAGGDISQQ   L
Sbjct: 843  GTGYGGSGFKFNEEEDEVRKAAKKAQAKEYGFEEEKSDSEDENDVVRKAGGDISQQQITL 902

Query: 960  AQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVT 1019
            AQIAAIA+A   +      P +A QLLPNGG   + PG     IP T             
Sbjct: 903  AQIAAIASAASKA------PVTANQLLPNGGGLATEPG-----IPPT------------- 962

Query: 1020 NDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISE 1079
             DGA   AA+ AA N+Q  LAKIQA AIPEHYEAELEINDFPQNARWKVTHKETLGPISE
Sbjct: 963  -DGAGRVAAMIAAANVQQYLAKIQADAIPEHYEAELEINDFPQNARWKVTHKETLGPISE 989

Query: 1080 WTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLP 1139
            W+GA+ITTRG+F+  G+I GP ERKLYLF+EGPTE SVK AKAELKRVLEDITNQT SLP
Sbjct: 1023 WSGASITTRGKFYEAGRIPGPEERKLYLFVEGPTEISVKTAKAELKRVLEDITNQTFSLP 989

Query: 1140 GGSQPGRYSVV 1149
            GG+Q GRYSV+
Sbjct: 1083 GGAQSGRYSVL 989

[Close]

BLAST of Lsi04G024240 vs. TAIR10
Match: AT2G47330.1 (AT2G47330.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 437.6 bits (1124), Expect = 2.4e-122
Identity = 268/626 (42.81%), Postives = 370/626 (59.11%), Query Frame = 1


Query: 298 NARPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMN 357
           ++R  +   D D +    ++ E+   D   G  AAA        G+   DEIDPLDAFM 
Sbjct: 35  SSRGGDNSEDADLDNIDYMENEEAEEDIEEGGSAAAS------GGEV--DEIDPLDAFME 94

Query: 358 SMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDT 417
                 + +  K   P    +K+   K  D    +S  K     + K +G  +  +  + 
Sbjct: 95  G-----IHQEMKSAPPPKPKEKLERYKDDDDDPVESYLK-----AKKDLGLTLAADALNA 154

Query: 418 DYGDLEN--------DADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIE 477
            Y   E         DA  L+ + DD  +  V K K E ++ +DHS +DY+P  K+FY E
Sbjct: 155 GYNSDEEVYAAAKAVDAGMLDYDSDDNPIV-VDKRKIEPITALDHSSIDYEPINKDFYEE 214

Query: 478 VKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQ 537
           ++ IS MT +E   YR++L +++ G DV +PVKT+   G +S+I+  IKK  YEKP  IQ
Sbjct: 215 LESISGMTEQETTDYRQRLGIRVSGFDVHRPVKTFEDCGFSSQIMSAIKKQAYEKPTAIQ 274

Query: 538 AQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQ 597
            QALPIV+SGRD IGIAKTGSGKT AFVLPM+ HI DQ  +   +GPIG+I APTREL  
Sbjct: 275 CQALPIVLSGRDVIGIAKTGSGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAH 334

Query: 598 QIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITN 657
           QI  + KKFSK  GLR   VYGG    +Q  ELK G EIVV TPGR+ID+L     K   
Sbjct: 335 QIFLEAKKFSKAYGLRVSAVYGGMSKHEQFKELKAGCEIVVATPGRLIDML---KMKALT 394

Query: 658 LRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPV 717
           + R +YLV+DEADRMFD+GFEPQ+  IV  IRPDRQT+LFSAT P +VE LAR++L+ P+
Sbjct: 395 MMRASYLVLDEADRMFDLGFEPQVRSIVGQIRPDRQTLLFSATMPWKVEKLAREILSDPI 454

Query: 718 EIQVGGRSVVNKDITQLVEVRPEN-ERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRD 777
            + VG   + N+DITQ+V V P + E+   LLE L    ++G +L+F   +   D +   
Sbjct: 455 RVTVGEVGMANEDITQVVNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQ 514

Query: 778 LLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPN 837
           L  + +   +LHG KDQ  R  T+  FKS V ++LIAT +AARGLD+K L+ V+N+D+  
Sbjct: 515 LTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDIAK 574

Query: 838 HYEDYVHRVGRTGRAG-RKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALA---D 897
             + +VHR+GRTGRAG R G A T + + ++R+A +LV +L  + Q VP +L  LA    
Sbjct: 575 DMDMHVHRIGRTGRAGDRDGVAYTLVTQREARFAGELVNSLVAAGQNVPPELTDLAMKDG 634

Query: 898 SFMAKVN--QGLEQAHGTGYGGSGFK 909
            F +K +  +G ++  G G G  G +
Sbjct: 635 RFKSKRDGRKGGKKGRGGGGGNKGVR 638

[Close]

BLAST of Lsi04G024240 vs. TAIR10
Match: AT5G63120.2 (AT5G63120.2 P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 430.3 bits (1105), Expect = 3.9e-120
Identity = 219/465 (47.10%), Postives = 309/465 (66.45%), Query Frame = 1


Query: 443 KTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVK 502
           K + + +S+   +  +   F KNFY+E   +  MT ++VA YR + ++ + G+DVPKP+K
Sbjct: 106 KRELDSVSLPKQNFGNLVHFEKNFYVESPTVQAMTEQDVAMYRTERDISVEGRDVPKPMK 165

Query: 503 TWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLR 562
            +        ILE I KL + +P PIQAQ  P+ + GRD IGIA+TGSGKTLA++LP L 
Sbjct: 166 MFQDANFPDNILEAIAKLGFTEPTPIQAQGWPMALKGRDLIGIAETGSGKTLAYLLPALV 225

Query: 563 HIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISEL 622
           H+  Q  +   DGPI LI+APTREL  QI  + +KF    G+R   +YGG+    QI +L
Sbjct: 226 HVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQIRDL 285

Query: 623 KRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRP 682
           +RG EIV+ TPGR+ID+L     + TNL+RVTYLV+DEADRM DMGFEPQI +IV  IRP
Sbjct: 286 RRGVEIVIATPGRLIDML---ECQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQIRP 345

Query: 683 DRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPENERFLRLLE 742
           DRQT+L+SAT+PR+VE LAR+ L  P +  +G   +  N+ I Q++E+ P  E++ RLL 
Sbjct: 346 DRQTLLWSATWPREVETLARQFLRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLT 405

Query: 743 LLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCN 802
           LL +  +  KILIFV ++  CD + R L   G+P L++HG K Q++R+  +++FKS    
Sbjct: 406 LLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSP 465

Query: 803 LLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYA 862
           ++ AT +AARGLDVK+++ V+N+D PN  EDY+HR+GRTGRAG KG A TF   +++++A
Sbjct: 466 IMTATDVAARGLDVKDIKCVVNYDFPNTLEDYIHRIGRTGRAGAKGMAFTFFTHDNAKFA 525

Query: 863 PDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHGTGYGGSG 907
            +LVK L+ + QVVP  L AL             ++ G+GYGGSG
Sbjct: 526 RELVKILQEAGQVVPPTLSALV------------RSSGSGYGGSG 555

[Close]

BLAST of Lsi04G024240 vs. TAIR10
Match: AT1G55150.1 (AT1G55150.1 DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 405.6 bits (1041), Expect = 1.0e-112
Identity = 196/426 (46.01%), Postives = 289/426 (67.84%), Query Frame = 1


Query: 461 PFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKL 520
           PF KNFY+E   ++ MT  EV  YRK  E+ + GKD+PKPVK++   G    +LE +KK 
Sbjct: 58  PFEKNFYVESPAVAAMTDTEVEEYRKLREITVEGKDIPKPVKSFRDVGFPDYVLEEVKKA 117

Query: 521 NYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLI 580
            + +P PIQ+Q  P+ M GRD IGIA+TGSGKTL+++LP + H+  Q  +  GDGPI L+
Sbjct: 118 GFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVLV 177

Query: 581 MAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDIL 640
           +APTREL  QI  +  KF     ++   +YGG     Q+ +L++G EIV+ TPGR+ID++
Sbjct: 178 LAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQVRDLQKGVEIVIATPGRLIDMM 237

Query: 641 CTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEIL 700
                  TNLRRVTYLV+DEADRM DMGF+PQI +IV +IRPDRQT+ +SAT+P++VE L
Sbjct: 238 ---ESNNTNLRRVTYLVLDEADRMLDMGFDPQIRKIVSHIRPDRQTLYWSATWPKEVEQL 297

Query: 701 ARKVLNKPVEIQVGGRSV-VNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQ 760
           ++K L  P ++ +G   +  N+ I Q+V+V  E++++ +L++LL +  +  +IL+F+ ++
Sbjct: 298 SKKFLYNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRILVFLDTK 357

Query: 761 EKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELE 820
           + CD + R L   G+P LS+HG K Q +R+  +S+F+S    ++ AT +AARGLDVK+++
Sbjct: 358 KGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARGLDVKDVK 417

Query: 821 LVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDL 880
            VIN+D P   EDYVHR+GRTGRAG KG A TF    ++R+A +L   L+ + Q V  +L
Sbjct: 418 YVINYDFPGSLEDYVHRIGRTGRAGAKGTAYTFFTVANARFAKELTNILQEAGQKVSPEL 477

Query: 881 RALADS 886
            ++  S
Sbjct: 478 ASMGRS 480

[Close]

BLAST of Lsi04G024240 vs. NCBI nr
Match: gi|659106989|ref|XP_008453490.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Cucumis melo])

HSP 1 Score: 1949.5 bits (5049), Expect = 0.0e+00
Identity = 1076/1149 (93.65%), Postives = 1097/1149 (95.47%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEE- 60
            MEEGRSKSRRDDLD+PKKSHR+RDRERDKERNGDRGRDKEKRD       RE+S DSEE 
Sbjct: 1    MEEGRSKSRRDDLDEPKKSHRERDRERDKERNGDRGRDKEKRD-------RERSYDSEEL 60

Query: 61   QQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKE 120
             Q+EREKEKL+RDKDKTR+RDDERDR RDRRK+R         DRAREKTRD      KE
Sbjct: 61   VQHEREKEKLRRDKDKTRNRDDERDRGRDRRKER---------DRAREKTRD------KE 120

Query: 121  KRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDS 180
            KRERAREKER+K         RDR+R+RERRERERDREKERDKDRRKRREVVS+ SDEDS
Sbjct: 121  KRERAREKERDK---------RDRDRDRERRERERDREKERDKDRRKRREVVSE-SDEDS 180

Query: 181  TDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENE 240
            T+HGRKRRRRDDDDHRAHESNSR+NKQRDHI+ESP+EKSEEDA DKNETKPTREEELENE
Sbjct: 181  TEHGRKRRRRDDDDHRAHESNSRINKQRDHIDESPREKSEEDAFDKNETKPTREEELENE 240

Query: 241  QRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNA 300
            Q+RLDEEMEKRRRRVQEWQKSRRLKEEAD DKQGE NADEPKSGKTWTLEGESDDEY+NA
Sbjct: 241  QKRLDEEMEKRRRRVQEWQKSRRLKEEADEDKQGELNADEPKSGKTWTLEGESDDEYENA 300

Query: 301  RPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSM 360
            RP ETDMDVDEN KPLVDGEQVAV+FNNGNEAAAPP QDSI+GDA DDEIDPLDAFMNSM
Sbjct: 301  RPTETDMDVDENSKPLVDGEQVAVNFNNGNEAAAPPPQDSIDGDAADDEIDPLDAFMNSM 360

Query: 361  VLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTDY 420
            VLPEVEKLNKVE PTVNDDKIAELKSRDKPSDQSGGK QRRI NKSMGRIIPGEDSDTDY
Sbjct: 361  VLPEVEKLNKVEVPTVNDDKIAELKSRDKPSDQSGGKAQRRIPNKSMGRIIPGEDSDTDY 420

Query: 421  GDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE 480
            GDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMT E
Sbjct: 421  GDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTSE 480

Query: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSG 540
            EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILE IKKLNYEKPMPIQAQALPIVMSG
Sbjct: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSG 540

Query: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600
            RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS
Sbjct: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600

Query: 601  KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660
            KV+GLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD
Sbjct: 601  KVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660

Query: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV 720
            EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV
Sbjct: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV 720

Query: 721  NKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780
            NKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL
Sbjct: 721  NKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780

Query: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840
            HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR
Sbjct: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840

Query: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHG 900
            TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVP+DLRALADSFMAKVNQGLEQAHG
Sbjct: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHG 900

Query: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960
            TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ
Sbjct: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960

Query: 961  IAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTND 1020
            IAAIAAATKVSA SITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTM VIP ATLP VTND
Sbjct: 961  IAAIAAATKVSAVSITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTND 1020

Query: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080
            GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT
Sbjct: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080

Query: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1140
            GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG
Sbjct: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1117

Query: 1141 SQPGRYSVV 1149
            SQPGRYSVV
Sbjct: 1141 SQPGRYSVV 1117

[Close]

BLAST of Lsi04G024240 vs. NCBI nr
Match: gi|778656513|ref|XP_011649205.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Cucumis sativus])

HSP 1 Score: 1948.7 bits (5047), Expect = 0.0e+00
Identity = 1071/1149 (93.21%), Postives = 1094/1149 (95.21%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEE- 60
            MEEGRSKSRRDDLD+PKKSHR+RDRERDKERNGDRGRDKEKRD       RE+S DSEE 
Sbjct: 1    MEEGRSKSRRDDLDEPKKSHRERDRERDKERNGDRGRDKEKRD-------RERSYDSEEL 60

Query: 61   QQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKE 120
             Q+EREKEK +RDKDKTR+RDDERDR RDRRK+R         DRAREKTRD      KE
Sbjct: 61   VQHEREKEKPRRDKDKTRNRDDERDRGRDRRKER---------DRAREKTRD------KE 120

Query: 121  KRERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDS 180
            KRERAREKER+K         RDR+R+RERRERERDREKERDKDRRKRREVVS+ SDEDS
Sbjct: 121  KRERAREKERDK---------RDRDRDRERRERERDREKERDKDRRKRREVVSEYSDEDS 180

Query: 181  TDHGRKRRRRDDDDHRAHESNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELENE 240
            T+HGRKRRRRDDDDHRAHESNSR+NKQRDH++ESP+EKSEEDA DKNETKPTREEELENE
Sbjct: 181  TEHGRKRRRRDDDDHRAHESNSRINKQRDHVDESPREKSEEDAFDKNETKPTREEELENE 240

Query: 241  QRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYDNA 300
            Q+RLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGE NADEPKSGKTWTLEGESDDEY+NA
Sbjct: 241  QKRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGELNADEPKSGKTWTLEGESDDEYENA 300

Query: 301  RPPETDMDVDENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDAGDDEIDPLDAFMNSM 360
            RP ETDMDVDEN KPLVDGEQ+AV+FNNGNEAAA P QDSI GDA DDEIDPLDAFMNSM
Sbjct: 301  RPTETDMDVDENSKPLVDGEQIAVNFNNGNEAAASPPQDSIGGDAADDEIDPLDAFMNSM 360

Query: 361  VLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGRIIPGEDSDTDY 420
            VLPEVEKLNKVE PTVNDDKI ELKSRDKPSDQSGGK QRRISNKSMGRIIPGEDSDTDY
Sbjct: 361  VLPEVEKLNKVEVPTVNDDKIVELKSRDKPSDQSGGKAQRRISNKSMGRIIPGEDSDTDY 420

Query: 421  GDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE 480
            GDLEND DTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE
Sbjct: 421  GDLENDGDTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYIEVKEISRMTLE 480

Query: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPIQAQALPIVMSG 540
            EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILE IKKLNYEKPMPIQAQALPIVMSG
Sbjct: 481  EVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILETIKKLNYEKPMPIQAQALPIVMSG 540

Query: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600
            RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS
Sbjct: 541  RDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELVQQIHSDIKKFS 600

Query: 601  KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660
            KV+GLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD
Sbjct: 601  KVMGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKITNLRRVTYLVMD 660

Query: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGRSVV 720
            EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVE+QVGGRSVV
Sbjct: 661  EADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKPVEVQVGGRSVV 720

Query: 721  NKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780
            NKDI QLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL
Sbjct: 721  NKDIAQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPCLSL 780

Query: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840
            HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR
Sbjct: 781  HGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPNHYEDYVHRVGR 840

Query: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMAKVNQGLEQAHG 900
            TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVP+DLRALADSFMAKVNQGLEQAHG
Sbjct: 841  TGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPDDLRALADSFMAKVNQGLEQAHG 900

Query: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960
            TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ
Sbjct: 901  TGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAGGDISQQAALAQ 960

Query: 961  IAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVIPGATLPAVTND 1020
            IAAIAAATKVSA SITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTM VIP ATLP VTND
Sbjct: 961  IAAIAAATKVSAVSITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMPVIPSATLPTVTND 1020

Query: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080
            GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT
Sbjct: 1021 GAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTHKETLGPISEWT 1080

Query: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1140
            GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG
Sbjct: 1081 GAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITNQTLSLPGG 1118

Query: 1141 SQPGRYSVV 1149
            SQPGRYSVV
Sbjct: 1141 SQPGRYSVV 1118

[Close]

BLAST of Lsi04G024240 vs. NCBI nr
Match: gi|1009121335|ref|XP_015877402.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Ziziphus jujuba])

HSP 1 Score: 1598.2 bits (4137), Expect = 0.0e+00
Identity = 913/1159 (78.77%), Postives = 1011/1159 (87.23%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEKRDRESRRSEREKSVDSEEQ 60
            +EEG+ KSRR++ DD       R R RDK+RNG+R RD++KRDR+SRRSERE+S DS+E+
Sbjct: 6    VEEGKHKSRREESDD------SRSRRRDKDRNGERHRDRDKRDRDSRRSERERSSDSDER 65

Query: 61   QYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREKEK 120
             +ER++EK +R KD+T SRDD+R+R+R +++DRD  RDRD+EDR          ER+KEK
Sbjct: 66   -HERDREK-ERHKDRTHSRDDDRERSRGKKRDRD--RDRDREDR----------ERDKEK 125

Query: 121  RERAREKEREKRERIKEDRERDRERERERRERERDREKERDKDRRKRREVVSDCSDEDST 180
            RER REKERE+ +  + D+E+  +RERER+ERER+RE+ + ++R KRREV SD S++   
Sbjct: 126  RERTREKEREREKERERDKEKREDRERERKERERERER-KIREREKRREVDSDDSNDGIR 185

Query: 181  DHGRKRRRRDDDDHRAHE---SNSRMNKQRDHIEESPQEKSEEDASDKNETKPTREEELE 240
            +  +KRRRRDDDD++  E   S+SR ++ RD  ++SP+++S ED  D  E +P  EEELE
Sbjct: 186  EREKKRRRRDDDDYKEREREHSSSRPSRHRDDSDDSPRKRSIEDGLDNKEKQPNHEEELE 245

Query: 241  NEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWTLEGESDDEYD 300
            +EQRRLDEEMEKRRRRVQEWQ+ RR KEEA+  K GEP+A+E KSGKTWTLEGESDDE  
Sbjct: 246  DEQRRLDEEMEKRRRRVQEWQELRRKKEEAERQKHGEPDANELKSGKTWTLEGESDDEEV 305

Query: 301  --NARPPETDMDVD----ENPKPLVDGEQVAVDFNNGNEAAAPPLQDSINGDA---GDDE 360
                  PET M++D     N K + D   +AVD  + N +A   LQ   NGDA   GD+E
Sbjct: 306  PLTTDKPETGMEIDVEANNNDKEVRDA--MAVD--SENRSAPSSLQ---NGDASADGDEE 365

Query: 361  IDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRISNKSMGR 420
            IDPLDAFMNSMVLPEVEKLN    P +  D  +  K +D   D+S     R++SNKSMGR
Sbjct: 366  IDPLDAFMNSMVLPEVEKLNNAVDPLIIVDGTSGSKDKDNMVDKSHTGQPRKVSNKSMGR 425

Query: 421  IIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPFRKNFYI 480
            IIPGEDSD+DYGD EN+ D +EDEDDDEFMKRVKKTKAEKLSIVDHSK+DY+PFRKNFYI
Sbjct: 426  IIPGEDSDSDYGDHENEDDAVEDEDDDEFMKRVKKTKAEKLSIVDHSKIDYKPFRKNFYI 485

Query: 481  EVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNYEKPMPI 540
            EV+EISRMT EEVAAYRKQLELKIHGKDVPKPVK+WHQTGLTSKILE IKKLNYEKPMPI
Sbjct: 486  EVREISRMTSEEVAAYRKQLELKIHGKDVPKPVKSWHQTGLTSKILETIKKLNYEKPMPI 545

Query: 541  QAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMAPTRELV 600
            QAQA+PI+MSGRDCIG+AKTGSGKTLAFVLPMLRHIKDQ PVV GDGPIGLIMAPTRELV
Sbjct: 546  QAQAVPIIMSGRDCIGVAKTGSGKTLAFVLPMLRHIKDQPPVVAGDGPIGLIMAPTRELV 605

Query: 601  QQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSAGKIT 660
            QQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTS GKIT
Sbjct: 606  QQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKIT 665

Query: 661  NLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKP 720
            NLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKP
Sbjct: 666  NLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILARKVLNKP 725

Query: 721  VEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRD 780
            VEIQVGGRSVVNKDI QLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRD
Sbjct: 726  VEIQVGGRSVVNKDIAQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKCDALFRD 785

Query: 781  LLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPN 840
            LL+HGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPN
Sbjct: 786  LLRHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVINFDVPN 845

Query: 841  HYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRALADSFMA 900
            HYEDYVHRVGRTGRAGRKG AITFI+EED+RYAPDLVKALELS+QVVP+DL+ALADSFMA
Sbjct: 846  HYEDYVHRVGRTGRAGRKGYAITFISEEDARYAPDLVKALELSDQVVPDDLKALADSFMA 905

Query: 901  KVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDDGVRKAG 960
            KVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDED+G+RKAG
Sbjct: 906  KVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGIRKAG 965

Query: 961  GDISQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIPGTMAVI 1020
            GDISQQAALAQIAAIAAA+K S  S+ TP SAAQLLPNGGLP SLPGVLGLTIPGT AV+
Sbjct: 966  GDISQQAALAQIAAIAAASKSSTPSLPTPISAAQLLPNGGLPASLPGVLGLTIPGTAAVV 1025

Query: 1021 PGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNARWKVTH 1080
            PG+ LP + NDGAA  AA+AAAMNLQHNLAKIQA A+PEHYEAELEINDFPQNARWKVTH
Sbjct: 1026 PGSGLPVLPNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNARWKVTH 1085

Query: 1081 KETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAELKRVLED 1140
            KETLGPISEWTGAAITTRGQ+FPPGKI GPGERKLYLFIEGPTEQSVKRAKAELKRVLED
Sbjct: 1086 KETLGPISEWTGAAITTRGQYFPPGKITGPGERKLYLFIEGPTEQSVKRAKAELKRVLED 1136

Query: 1141 ITNQTLSLPGGSQPGRYSV 1148
            ITNQ LSLPGG+QPG+YSV
Sbjct: 1146 ITNQALSLPGGTQPGKYSV 1136

[Close]

BLAST of Lsi04G024240 vs. NCBI nr
Match: gi|645264907|ref|XP_008237900.1| (PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Prunus mume])

HSP 1 Score: 1583.9 bits (4100), Expect = 0.0e+00
Identity = 904/1166 (77.53%), Postives = 1019/1166 (87.39%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEK--RDRESRRSEREKSVDSE 60
            MEEG+ KSR++   + K+SHRDR RE  KERNG+R RDK+K  RDR+SRRSEREKS DSE
Sbjct: 1    MEEGKHKSRKEG--ESKRSHRDRQRE--KERNGERHRDKDKDKRDRDSRRSEREKSSDSE 60

Query: 61   EQQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREK 120
            ++ Y+REK +  RD D+TRSRDDER+RTRDR++++DKE+++++ DRAREK    EKERE+
Sbjct: 61   DR-YDREKHR-DRDTDRTRSRDDERERTRDRKREKDKEKEKER-DRAREK----EKERER 120

Query: 121  EKRERAREKEREKRERIKEDRERDRE---RERERRERERDREKERDKDRR-----KRREV 180
            E+     EKE+E RER +E RER+RE   RERE+RERER+REK+RD++RR     +RR++
Sbjct: 121  ERXXXXXEKEKE-RERERERREREREGEDREREKREREREREKDRDRERRIRERERRRDI 180

Query: 181  VSDCSDEDSTDHGRKRRRRDDDDHRAHE---SNSRMNKQRDHIEESPQEKSEEDASDKNE 240
             +D +D+D  + GRKR R+D+++++  E   S+SR N+ RD  + SP++KS+ED S K E
Sbjct: 181  DTDDTDDDVRERGRKRHRKDENEYKEKERERSSSRSNRHRDDGDGSPRKKSDEDDSVKRE 240

Query: 241  TKPTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADEPKSGKTWT 300
             +PTREEELE+EQR+LDEEMEKRRRRVQEWQ+ +R KEE++ +K+GE + DEPKSGK WT
Sbjct: 241  KQPTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESEREKRGEGDVDEPKSGKAWT 300

Query: 301  LEGESDDE-YDNARPPETDMDVDENPKPLVD----GEQVAVDFNNGNEAAAPPLQDSING 360
            LEGESDDE   +    E DMDVD     L D    G+ + VD  + NE  AP LQ+  + 
Sbjct: 301  LEGESDDEEVPSLGKSERDMDVDGEDN-LTDREAGGDAMVVD--SENETDAPTLQNGADD 360

Query: 361  DAGDDEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSGGKPQRRIS 420
              GD+E+DPLDAFMNSMVLPEVEKLN    P++ D+K     ++DK  D+S G+  RR S
Sbjct: 361  AVGDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEK-----NKDKKDDRSNGEQPRRGS 420

Query: 421  NKSMGRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDHSKMDYQPF 480
            NKSMGRIIPGEDSD+DYGDLEND D LEDE DDEF+KRVKKTKAEKLS+VDHSK+DY PF
Sbjct: 421  NKSMGRIIPGEDSDSDYGDLENDDDPLEDEGDDEFIKRVKKTKAEKLSVVDHSKIDYDPF 480

Query: 481  RKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKILEMIKKLNY 540
            RKNFYIEVKEISRMT E+V AYRK+LELKIHGKDVPKP+KTWHQTGLTSKILE IKKLNY
Sbjct: 481  RKNFYIEVKEISRMTPEQVGAYRKELELKIHGKDVPKPIKTWHQTGLTSKILETIKKLNY 540

Query: 541  EKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGDGPIGLIMA 600
            EKPMPIQAQA+P++MSGRDCIGIAKTGSGKT+AFVLPMLRHIKDQ PVV GDGPIGLIMA
Sbjct: 541  EKPMPIQAQAVPVIMSGRDCIGIAKTGSGKTVAFVLPMLRHIKDQQPVVAGDGPIGLIMA 600

Query: 601  PTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT 660
            PTRELVQQIHSDIKKF+KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT
Sbjct: 601  PTRELVQQIHSDIKKFTKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCT 660

Query: 661  SAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEILAR 720
            S G+ITNLRRVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVE+LAR
Sbjct: 661  SGGRITNLRRVTYLVVDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFPRQVEVLAR 720

Query: 721  KVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILIFVHSQEKC 780
            KVLNKPVEIQVGGRSVVNKDI QLVEVR ENERFLRLLELLGEWYEKGKILIFV SQ KC
Sbjct: 721  KVLNKPVEIQVGGRSVVNKDIAQLVEVRLENERFLRLLELLGEWYEKGKILIFVESQNKC 780

Query: 781  DALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLDVKELELVI 840
            DALFRDLL+HGYPCLSLHG KDQTDRESTI+DFKSNVCNLLIATS+AARGLDVKELELVI
Sbjct: 781  DALFRDLLRHGYPCLSLHGGKDQTDRESTITDFKSNVCNLLIATSVAARGLDVKELELVI 840

Query: 841  NFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQVVPNDLRAL 900
            NFD PNHYEDYVHRVGRTGRAGRKGCAITF++EED+RYAPDLVKALELSEQVVP+DL++L
Sbjct: 841  NFDSPNHYEDYVHRVGRTGRAGRKGCAITFVSEEDARYAPDLVKALELSEQVVPDDLKSL 900

Query: 901  ADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDD 960
            ADSF AKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFE+DKSDSEDED+
Sbjct: 901  ADSFTAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEDDKSDSEDEDE 960

Query: 961  GVRKAGGDISQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLPGVLGLTIP 1020
            G+RKAGGDISQQAALAQIAAIAAA+K S ASI TP  AAQLLPN GLPVSLPGVLGLT+P
Sbjct: 961  GIRKAGGDISQQAALAQIAAIAAASKGSTASIQTPVPAAQLLPNSGLPVSLPGVLGLTLP 1020

Query: 1021 GTMAVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELEINDFPQNA 1080
            GT A + G  LP V NDGAA  AA+AAAMNLQHNLAKIQA A+PEHYEAELEINDFPQNA
Sbjct: 1021 GTAAAVAGTGLPVVGNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNA 1080

Query: 1081 RWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQSVKRAKAEL 1140
            RWKVTHKETLGPISEWTGAAITTRGQ+FPPGK+AGPG+RKLYLFIEGPTEQSVKRAKAEL
Sbjct: 1081 RWKVTHKETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPTEQSVKRAKAEL 1140

Query: 1141 KRVLEDITNQTLSLPGGSQPGRYSVV 1149
            KRVLEDI+NQ LSLPGG+Q GRY V+
Sbjct: 1141 KRVLEDISNQALSLPGGAQQGRYQVL 1146

[Close]

BLAST of Lsi04G024240 vs. NCBI nr
Match: gi|595860187|ref|XP_007211096.1| (hypothetical protein PRUPE_ppa000460mg [Prunus persica])

HSP 1 Score: 1583.9 bits (4100), Expect = 0.0e+00
Identity = 906/1174 (77.17%), Postives = 1025/1174 (87.31%), Query Frame = 1


Query: 1    MEEGRSKSRRDDLDDPKKSHRDRDRERDKERNGDRGRDKEK--RDRESRRSEREKSVDSE 60
            MEEG+ KSR++   + K+SHRDR RE  K+RNG+R RDK+K  RDR+SRRSEREKS DSE
Sbjct: 1    MEEGKHKSRKEG--ESKRSHRDRQRE--KQRNGERHRDKDKDKRDRDSRRSEREKSSDSE 60

Query: 61   EQQYEREKEKLKRDKDKTRSRDDERDRTRDRRKDRDKERDRDKEDRAREKTRDKEKEREK 120
            ++ Y+REK +  RD D+TRSRDDER+RTRDR++++DKE+++++E RAREK +++E+ERE+
Sbjct: 61   DR-YDREKHR-DRDTDRTRSRDDERERTRDRKREKDKEKEKERE-RAREKEKERERERER 120

Query: 121  EK---RERAREKEREK-----RERIKEDRERDRE---RERERRERERDREKERDKDRR-- 180
            E+   +ER REKEREK     RER +E RER+RE   RERE+RERER+REK+RD++RR  
Sbjct: 121  EREREKERDREKEREKEKEKERERERERREREREGEDREREKREREREREKDRDRERRIR 180

Query: 181  ---KRREVVSDCSDEDSTDHGRKRRRRDDDDHRAHE---SNSRMNKQRDHIEESPQEKSE 240
               +RR++ +D +D+D  + GRKR R+D+++++  E   S+SR N+ RD  + SP++KS+
Sbjct: 181  ERERRRDIDTDDTDDDVRERGRKRHRKDENEYKEKERERSSSRSNRHRDDGDGSPRKKSD 240

Query: 241  EDASDKNETKPTREEELENEQRRLDEEMEKRRRRVQEWQKSRRLKEEADGDKQGEPNADE 300
            ED S K E +PTREEELE+EQR+LDEEMEKRRRRVQEWQ+ +R KEE++ +K+GE + DE
Sbjct: 241  EDDSVKKEKQPTREEELEDEQRKLDEEMEKRRRRVQEWQELKRKKEESEREKRGEGDVDE 300

Query: 301  PKSGKTWTLEGESDDE-YDNARPPETDMDVDENPKPLVD----GEQVAVDFNNGNEAAAP 360
            PKSGK WTLEGESDDE   +    E DMDVD     L D    G+ + VD  + NE  A 
Sbjct: 301  PKSGKAWTLEGESDDEEVPSLGKSERDMDVDGEDN-LTDREAGGDAMVVD--SENETDAL 360

Query: 361  PLQDSINGDAGDDEIDPLDAFMNSMVLPEVEKLNKVEAPTVNDDKIAELKSRDKPSDQSG 420
             LQ+  +   GD+E+DPLDAFMNSMVLPEVEKLN    P++ D+K     ++DK  D S 
Sbjct: 361  TLQNGADDAVGDEEVDPLDAFMNSMVLPEVEKLNNAVEPSIVDEK-----NKDKKDDLSN 420

Query: 421  GKPQRRISNKSMGRIIPGEDSDTDYGDLENDADTLEDEDDDEFMKRVKKTKAEKLSIVDH 480
            G+  RR SNKSMGRIIPGEDSD+DYGDLEND D LEDE DDEF+KRVKKTKAEKLS+VDH
Sbjct: 421  GEQPRRGSNKSMGRIIPGEDSDSDYGDLENDDDPLEDEGDDEFIKRVKKTKAEKLSVVDH 480

Query: 481  SKMDYQPFRKNFYIEVKEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTWHQTGLTSKIL 540
            SK+DY PFRKNFYIEVKEISRMT E+V AYRK+LELKIHGKDVPKP+KTWHQTGLTSKIL
Sbjct: 481  SKIDYDPFRKNFYIEVKEISRMTPEQVGAYRKELELKIHGKDVPKPIKTWHQTGLTSKIL 540

Query: 541  EMIKKLNYEKPMPIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQSPVVPGD 600
            E IKKLNYEKPMPIQAQA+P++MSGRDCIGIAKTGSGKT+AFVLPMLRHIKDQ PVV GD
Sbjct: 541  ETIKKLNYEKPMPIQAQAVPVIMSGRDCIGIAKTGSGKTVAFVLPMLRHIKDQPPVVAGD 600

Query: 601  GPIGLIMAPTRELVQQIHSDIKKFSKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG 660
            GPIGLIMAPTRELVQQIHSDIKKF+KVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG
Sbjct: 601  GPIGLIMAPTRELVQQIHSDIKKFTKVLGLRCVPVYGGSGVAQQISELKRGAEIVVCTPG 660

Query: 661  RMIDILCTSAGKITNLRRVTYLVMDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 720
            RMIDILCTS G+ITNLRRVTYLV+DEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP
Sbjct: 661  RMIDILCTSGGRITNLRRVTYLVVDEADRMFDMGFEPQITRIVQNIRPDRQTVLFSATFP 720

Query: 721  RQVEILARKVLNKPVEIQVGGRSVVNKDITQLVEVRPENERFLRLLELLGEWYEKGKILI 780
            RQVE+LARKVLNKPVEIQVGGRSVVNKDI QLVEVR ENERFLRLLELLGEWYEKGKILI
Sbjct: 721  RQVEVLARKVLNKPVEIQVGGRSVVNKDIAQLVEVRLENERFLRLLELLGEWYEKGKILI 780

Query: 781  FVHSQEKCDALFRDLLKHGYPCLSLHGAKDQTDRESTISDFKSNVCNLLIATSIAARGLD 840
            FV SQ KCDALFRDLL+HGYPCLSLHG KDQTDRESTI+DFKSNVCNLLIATS+AARGLD
Sbjct: 781  FVESQNKCDALFRDLLRHGYPCLSLHGGKDQTDRESTITDFKSNVCNLLIATSVAARGLD 840

Query: 841  VKELELVINFDVPNHYEDYVHRVGRTGRAGRKGCAITFIAEEDSRYAPDLVKALELSEQV 900
            VKELELVINFD PNHYEDYVHRVGRTGRAGRKGCAITF++EED+RYAPDLVKALELSEQV
Sbjct: 841  VKELELVINFDSPNHYEDYVHRVGRTGRAGRKGCAITFVSEEDARYAPDLVKALELSEQV 900

Query: 901  VPNDLRALADSFMAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDK 960
            VP+DL++LADSF AKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFE+DK
Sbjct: 901  VPDDLKSLADSFTAKVNQGLEQAHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEDDK 960

Query: 961  SDSEDEDDGVRKAGGDISQQAALAQIAAIAAATKVSAASITTPSSAAQLLPNGGLPVSLP 1020
            SDSEDED+G+RKAGGDISQQAALAQIAAIAAA+K S ASI TP  AAQLLPN GLPVSLP
Sbjct: 961  SDSEDEDEGIRKAGGDISQQAALAQIAAIAAASKGSTASIQTPVPAAQLLPNSGLPVSLP 1020

Query: 1021 GVLGLTIPGTMAVIPGATLPAVTNDGAAARAALAAAMNLQHNLAKIQASAIPEHYEAELE 1080
            GVLGLT+PGT A + G  LP V NDGAA  AA+AAAMNLQHNLAKIQA A+PEHYEAELE
Sbjct: 1021 GVLGLTLPGTAAAVAGTGLPVVGNDGAARAAAIAAAMNLQHNLAKIQADAMPEHYEAELE 1080

Query: 1081 INDFPQNARWKVTHKETLGPISEWTGAAITTRGQFFPPGKIAGPGERKLYLFIEGPTEQS 1140
            INDFPQNARWKVTHKETLGPISEWTGAAITTRGQ+FPPGK+AGPG+RKLYLFIEGPTEQS
Sbjct: 1081 INDFPQNARWKVTHKETLGPISEWTGAAITTRGQYFPPGKVAGPGDRKLYLFIEGPTEQS 1140

Query: 1141 VKRAKAELKRVLEDITNQTLSLPGGSQPGRYSVV 1149
            VKRAKAELKRVLEDI+NQ LSLPGG+Q GRY V+
Sbjct: 1141 VKRAKAELKRVLEDISNQALSLPGGAQQGRYQVL 1159

The following BLAST results are available for this feature:

BLAST of Lsi04G024240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RH42_ARATH	0.0e+00	69.24	DEAD-box ATP-dependent RNA helicase 42 OS=Arabidopsis thaliana GN=RH42 PE=1 SV=2	[more]
RH42_ORYSJ	0.0e+00	65.00	DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa subsp. japonica GN=Os08g0...	[more]
RH45_ARATH	0.0e+00	63.06	DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana GN=RH45 PE=3 SV=1	[more]
RH45_ORYSJ	0.0e+00	65.25	DEAD-box ATP-dependent RNA helicase 45 OS=Oryza sativa subsp. japonica GN=Os08g0...	[more]
DDX46_HUMAN	6.1e-192	43.62	Probable ATP-dependent RNA helicase DDX46 OS=Homo sapiens GN=DDX46 PE=1 SV=2	[more]

BLAST of Lsi04G024240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPZ3_CUCSA	0.0e+00	93.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G025140 PE=4 SV=1	[more]
M5WZQ0_PRUPE	0.0e+00	77.17	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000460mg PE=4 SV=1	[more]
W9QWD8_9ROSA	0.0e+00	77.64	DEAD-box ATP-dependent RNA helicase 42 OS=Morus notabilis GN=L484_024795 PE=4 SV...	[more]
A0A067FDM7_CITSI	0.0e+00	76.69	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g001264mg PE=4 SV=1	[more]
V4U8B7_9ROSI	0.0e+00	76.69	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10004206mg PE=4 SV=1	[more]

BLAST of Lsi04G024240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G20920.1	0.0e+00	69.24	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT3G09620.1	0.0e+00	63.06	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT2G47330.1	2.4e-122	42.81	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT5G63120.2	3.9e-120	47.10	P-loop containing nucleoside triphosphate hydrolases superfamily pro...	[more]
AT1G55150.1	1.0e-112	46.01	DEA(D/H)-box RNA helicase family protein	[more]

BLAST of Lsi04G024240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659106989\|ref\|XP_008453490.1\|	0.0e+00	93.65	PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Cucumis melo]	[more]
gi\|778656513\|ref\|XP_011649205.1\|	0.0e+00	93.21	PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Cucumis sativus]	[more]
gi\|1009121335\|ref\|XP_015877402.1\|	0.0e+00	78.77	PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Ziziphus jujuba]	[more]
gi\|645264907\|ref\|XP_008237900.1\|	0.0e+00	77.53	PREDICTED: DEAD-box ATP-dependent RNA helicase 42 [Prunus mume]	[more]
gi\|595860187\|ref\|XP_007211096.1\|	0.0e+00	77.17	hypothetical protein PRUPE_ppa000460mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR014014	RNA_helicase_DEAD_Q_motif
IPR014001	Helicase_ATP-bd
IPR011545	DEAD/DEAH_box_helicase_dom
IPR001650	Helicase_C
IPR000629	RNA-helicase_DEAD-box_CS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G024240.1	Lsi04G024240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000629	ATP-dependent RNA helicase DEAD-box, conserved site	PROSITE	PS00039	DEAD_ATP_HELICASE	coord: 657..665 scor
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 736..844 score: 4.2
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 763..844 score: 8.8
IPR001650	Helicase, C-terminal	PROFILE	PS51194	HELICASE_CTER	coord: 722..883 score: 23
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 527..698 score: 2.9
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 521..726 score: 1.8
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROFILE	PS51192	HELICASE_ATP_BIND_1	coord: 533..711 score: 32
IPR014014	RNA helicase, DEAD-box type, Q motif	PROFILE	PS51195	Q_MOTIF	coord: 502..530 score: 10
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	G3DSA:3.40.50.300		coord: 716..881 score: 1.1E-49coord: 485..715 score: 1.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 574..860 score: 2.41
None	No IPR available	unknown	Coil	Coil	coord: 1112..1132 score: -coord: 48..79 score: -coord: 102..156 score: -coord: 229..260 scor
None	No IPR available	PANTHER	PTHR24031	RNA HELICASE	coord: 15..48 score: 0.0coord: 440..945 score: 0.0coord: 1089..1132 score:
None	No IPR available	PANTHER	PTHR24031:SF25	PROTEIN F53H1.1, ISOFORM A	coord: 15..48 score: 0.0coord: 440..945 score: 0.0coord: 1089..1132 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G024240	CmaCh09G000220	Cucurbita maxima (Rimu)	cmalsiB028
Lsi04G024240	CmoCh09G000210	Cucurbita moschata (Rifu)	cmolsiB016
Lsi04G024240	Cla023480	Watermelon (97103) v1	lsiwmB336
Lsi04G024240	Cla97C11G225170	Watermelon (97103) v2	lsiwmbB269
Lsi04G024240	Bhi09G002304	Wax gourd	lsiwgoB399
Lsi04G024240	Carg08603	Silver-seed gourd	carlsiB095

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G024240	Cucumber (Gy14) v1	cgylsiB438
Lsi04G024240	Cucurbita maxima (Rimu)	cmalsiB429
Lsi04G024240	Cucurbita moschata (Rifu)	cmolsiB418
Lsi04G024240	Cucurbita pepo (Zucchini)	cpelsiB467
Lsi04G024240	Wild cucumber (PI 183967)	cpilsiB286
Lsi04G024240	Cucumber (Chinese Long) v2	culsiB286
Lsi04G024240	Melon (DHL92) v3.5.1	lsimeB326
Lsi04G024240	Watermelon (Charleston Gray)	lsiwcgB262
Lsi04G024240	Cucumber (Gy14) v2	cgyblsiB266
Lsi04G024240	Melon (DHL92) v3.6.1	lsimedB342
Lsi04G024240	Silver-seed gourd	carlsiB325
Lsi04G024240	Cucumber (Chinese Long) v3	cuclsiB307