Lsi04G023570 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G023570
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Beta-1,3-galactosyltransferase-like protein
Location	chr04 : 30765521 .. 30766977 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGTTACATTTCTATGTAATGAGATTGAGTAGTCTTGTAGTACTCAAATAAATAAACGAACGAAGTTACTCAAAATACGAGATTGTTTAAAAATCTGAGATCCATGTTATCGCAATTCAACTTTTCCGAAAACGGAAACACAAGTGGGTAACGACCTGATTAATTGTTTAATCATGATTAGTAAAGTCAATAAACACAGAGTTAATTATTCTAATTGGAGAAAGCGATGAAGATGGTGGTTTGCATTATTTTATAATTCTTAAAGCGGACCCGAGTTATGGCGTGATTAGCGTTAGCGTGGATGAGGCAAATGACAATTCTTATTTCTTCCTTTGGCAGCCTAACTTTTGATACTCTGACTTCCAAAAACGCGCCTAATTCTTCTTCGATGTCGTTTTGATTTATTTATGACGCACAAAACCCAATTTCATTCTACTTTCTTCCTTCCATTAACCCCATAATAAAAGTCTTTGATCATTCCTCCAGTTTTCCTTCGGTGGGTCGTCTCTCTCGTTTCACGGACCAAAAAACAGCAAACCACAAAATGAAGAGCCGTGGCACTAGAAAGATTTCCATTATATGGGTTCCTTTCTTTTGTCTCTCCTTCTTCTTTTTCGGTATGCTCATCACAAACAGGTTTCTATTTTCTTCCACCCTTTTCTCTTTTTGGTTTGATGGGATTTTCTATTTTTATGGGTTTTGATTGTTGATTTGGGGGGTTTTGGATTTCTGGGTTATGTAGCAGGACATGGTCGGTGTCTGAATCCAATGGCCAGGTCATCTCCCGTCGTCGACATGAACAAGAACTTCAAATCGTCTCTGAAGATAGCTCAATTAAGATCGTGAGTGTGTTTGCATCTGATTCCCAACATTTTCACGACTGATTCGGTTGCTTGTTTAGTTTGATTTTTCTTTTTTCTTGGAAATTTTTAAGCCAGCGGAAAAAAAGGATGTGATGACCGAAGTCTATAGAACTCACGAAGCAATCCAGTTTAGTACAACTTATCTTTATTTCCAATTTTTCGCTTCATCATTCTTACATTTTTGGCTTAACAAACTGTTGTCCTCCTTTGGGATACAGATCTTTAGACAAGAAAATTACAATGCTTAACATGGATTTAGTGGAGGCTAGGAATTCTCGGGACATGCACTCCTCTGATAGCTACACCCCCTCTATTGAATCCTCTGGTAAAGTAAACTTGCCGAAGAAGAAAATGTTAATGGTGATTGGGATAAACACCGCTTTTAGTAGCAGAAGGCGTCGAGATTCGGTCAGAGAGACGTGGATGCCTCGAGGTATTTAGGTCCCACCCACTGTTCTTATGTTTCATTTTGATCAGTTGAAGTTATTTTTCTGCTAAGACATGGTTTGATGTTTTGGTCAGGGGAAAAGCTGTTCCAGTTGGAGCGAGAGAAGGGAATTGTTGTCCGGTTTATGATTGGCCATAGGTAG

mRNA sequence

ATGGTAGTTACATTTCTATTAAAGTCAATAAACACAGAGTTAATTATTCTAATTGGAGAAAGCGATGAAGATGGTGGTTTGCATTATTTTATAATTCTTAAAGCGGACCCGACAGGACATGGTCGGTGTCTGAATCCAATGGCCAGGTCATCTCCCGTCGTCGACATGAACAAGAACTTCAAATCGTCTCTGAAGATAGCTCAATTAAGATCATCTTTAGACAAGAAAATTACAATGCTTAACATGGATTTAGTGGAGGCTAGGAATTCTCGGGACATGCACTCCTCTGATAGCTACACCCCCTCTATTGAATCCTCTGGTAAAGTAAACTTGCCGAAGAAGAAAATGTTAATGGTGATTGGGATAAACACCGCTTTTAGTAGCAGAAGGCGTCGAGATTCGGTCAGAGAGACGTGGATGCCTCGAGGGGAAAAGCTGTTCCAGTTGGAGCGAGAGAAGGGAATTGTTGTCCGGTTTATGATTGGCCATAGGTAG

Coding sequence (CDS)

ATGGTAGTTACATTTCTATTAAAGTCAATAAACACAGAGTTAATTATTCTAATTGGAGAAAGCGATGAAGATGGTGGTTTGCATTATTTTATAATTCTTAAAGCGGACCCGACAGGACATGGTCGGTGTCTGAATCCAATGGCCAGGTCATCTCCCGTCGTCGACATGAACAAGAACTTCAAATCGTCTCTGAAGATAGCTCAATTAAGATCATCTTTAGACAAGAAAATTACAATGCTTAACATGGATTTAGTGGAGGCTAGGAATTCTCGGGACATGCACTCCTCTGATAGCTACACCCCCTCTATTGAATCCTCTGGTAAAGTAAACTTGCCGAAGAAGAAAATGTTAATGGTGATTGGGATAAACACCGCTTTTAGTAGCAGAAGGCGTCGAGATTCGGTCAGAGAGACGTGGATGCCTCGAGGGGAAAAGCTGTTCCAGTTGGAGCGAGAGAAGGGAATTGTTGTCCGGTTTATGATTGGCCATAGGTAG

Protein sequence

MVVTFLLKSINTELIILIGESDEDGGLHYFIILKADPTGHGRCLNPMARSSPVVDMNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGHR

Homology

[Close]

BLAST of Lsi04G023570 vs. Swiss-Prot
Match: B3GT5_ARATH (Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.7e-19
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1


Query: 57  NKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKM 116
           N   +  LK  +   SLDK ++ML   L    + + + +  +   S E +      K K+
Sbjct: 72  NDVMEEVLKTHKAIESLDKSVSMLQKQLSATHSPQQIVNVSATNSSTEGN-----QKNKV 131

Query: 117 LMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
            MVIGINTAFSSR+RRDS+RETWMP+GEKL +LE+EKGIVV+FMIGH
Sbjct: 132 FMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMIGH 173

[Close]

BLAST of Lsi04G023570 vs. Swiss-Prot
Match: B3GT1_ARATH (Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=2 SV=2)

HSP 1 Score: 94.0 bits (232), Expect = 1.7e-18
Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 73  LDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLP----KKKMLMVIGINTAFSS 132
           LDK I+ L M LV AR  R+             SGK N+     K+K  MVIGINTAFSS
Sbjct: 79  LDKSISNLEMKLVAARAERE-----------SLSGKFNISNEAKKRKYFMVIGINTAFSS 138

Query: 133 RRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           R+RRDSVR TWMP+GE L +LE EKGI+VRF+IGH
Sbjct: 139 RKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGH 162

[Close]

BLAST of Lsi04G023570 vs. Swiss-Prot
Match: B3GT3_ARATH (Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.7e-18
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLP-KKKMLMVIGINTAFSSRR 131
           +LDK I+ L M+L  AR++++  S  +  P      K  LP K++ LMV+GINTAFSSR+
Sbjct: 97  TLDKTISSLEMELAAARSAQE--SLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRK 156

Query: 132 RRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RRDSVR TWMP GEK  +LE EKGI++RF+IGH
Sbjct: 157 RRDSVRTTWMPSGEKRKKLEEEKGIIIRFVIGH 187

[Close]

BLAST of Lsi04G023570 vs. Swiss-Prot
Match: B3GT7_ARATH (Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 4.8e-18
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDK ++ L+      R+S++M             G    P+KK+ MV+GINTAFSSR+R
Sbjct: 89  SLDKSVSTLS----STRSSQEM-----------VDGSETNPRKKVFMVMGINTAFSSRKR 148

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMP+GEKL +LE+EKGIV++FMIGH
Sbjct: 149 RDSVRETWMPQGEKLERLEQEKGIVIKFMIGH 165

[Close]

BLAST of Lsi04G023570 vs. Swiss-Prot
Match: B3GT2_ARATH (Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=2 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.8e-17
Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVN-LPKKKMLMVIGINTAFSSRR 131
           +LDK I+ L M+L  AR+ ++  S  +  P  +  GK     +++ LMV+GINTAFSSR+
Sbjct: 95  TLDKTISSLEMELAAARSVQE--SLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRK 154

Query: 132 RRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RRDS+R TWMP+GEK  +LE EKGI++RF+IGH
Sbjct: 155 RRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGH 185

[Close]

BLAST of Lsi04G023570 vs. TrEMBL
Match: A0A0A0KY94_CUCSA (Hexosyltransferase OS=Cucumis sativus GN=Csa_4G377730 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 4.8e-41
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDKKITMLNMDLVEARNSR+MHSSDS+TPSIESSGK NLPKKKMLMVIGINTAFSSRRR
Sbjct: 84  SLDKKITMLNMDLVEARNSREMHSSDSHTPSIESSGKSNLPKKKMLMVIGINTAFSSRRR 143

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH
Sbjct: 144 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 175

[Close]

BLAST of Lsi04G023570 vs. TrEMBL
Match: A0A0R0GV77_SOYBN (Hexosyltransferase OS=Glycine max GN=GLYMA_13G084600 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.2e-24
Identity = 63/109 (57.80%), Postives = 81/109 (74.31%), Query Frame = 1


Query: 56  MNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVN-LPKK 115
           M+KN K    I  L+ SLDK+++ML M+L  AR++R+   SD    ++ S       P+K
Sbjct: 1   MSKNCKWCQGIVLLKRSLDKQVSMLQMELAAARSTREHKISDGSANTLASGVSTEGPPRK 60

Query: 116 KMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           K+ +VIGINTAFSSR+RRDSVRETWMP+GE+L QLEREKGIV+RFMIGH
Sbjct: 61  KVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 109

[Close]

BLAST of Lsi04G023570 vs. TrEMBL
Match: G7J458_MEDTR (Hexosyltransferase OS=Medicago truncatula GN=MTR_3g073370 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 1


Query: 49  RSSPVVDMNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGK 108
           +  P  +MN+ +K+   I     +LDK+++ML M+L  AR+SR  +S+ S T S E + K
Sbjct: 67  QEKPKDEMNELYKTHEAI----QALDKQVSMLQMELAAARSSRKKNSTGSATNSSEGASK 126

Query: 109 VNLPKKKMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
               KKK  +VIGINTAFSSR+RRDSVRETWMP+GE+L QLEREKGIV+RFMIGH
Sbjct: 127 ----KKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 173

[Close]

BLAST of Lsi04G023570 vs. TrEMBL
Match: G7J459_MEDTR (Beta-1,3-galactosyltransferase-like protein OS=Medicago truncatula GN=MTR_3g073370 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 1


Query: 49  RSSPVVDMNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGK 108
           +  P  +MN+ +K+   I     +LDK+++ML M+L  AR+SR  +S+ S T S E + K
Sbjct: 68  QEKPKDEMNELYKTHEAI----QALDKQVSMLQMELAAARSSRKKNSTGSATNSSEGASK 127

Query: 109 VNLPKKKMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
               KKK  +VIGINTAFSSR+RRDSVRETWMP+GE+L QLEREKGIV+RFMIGH
Sbjct: 128 ----KKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 174

[Close]

BLAST of Lsi04G023570 vs. TrEMBL
Match: B7FF80_MEDTR (Hexosyltransferase (Fragment) OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 65/115 (56.52%), Postives = 84/115 (73.04%), Query Frame = 1


Query: 49  RSSPVVDMNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGK 108
           +  P  +MN+ +K+   I     +LDK+++ML M+L  AR+SR  +S+ S T S E + K
Sbjct: 67  QEKPKDEMNELYKTHEAI----QALDKQVSMLQMELAAARSSRKKNSTGSATNSSEGASK 126

Query: 109 VNLPKKKMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
               KKK  +VIGINTAFSSR+RRDSVRETWMP+GE+L QLEREKGIV+RFMIGH
Sbjct: 127 ----KKKAFIVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 173

[Close]

BLAST of Lsi04G023570 vs. TAIR10
Match: AT1G22015.1 (AT1G22015.1 Galactosyltransferase family protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.5e-20
Identity = 53/107 (49.53%), Postives = 70/107 (65.42%), Query Frame = 1


Query: 57  NKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKM 116
           N   +  LK  +   SLDK ++ML   L    + + + +  +   S E +      K K+
Sbjct: 72  NDVMEEVLKTHKAIESLDKSVSMLQKQLSATHSPQQIVNVSATNSSTEGN-----QKNKV 131

Query: 117 LMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
            MVIGINTAFSSR+RRDS+RETWMP+GEKL +LE+EKGIVV+FMIGH
Sbjct: 132 FMVIGINTAFSSRKRRDSLRETWMPQGEKLEKLEKEKGIVVKFMIGH 173

[Close]

BLAST of Lsi04G023570 vs. TAIR10
Match: AT1G11730.1 (AT1G11730.1 Galactosyltransferase family protein)

HSP 1 Score: 94.0 bits (232), Expect = 9.4e-20
Identity = 54/95 (56.84%), Postives = 63/95 (66.32%), Query Frame = 1


Query: 73  LDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLP----KKKMLMVIGINTAFSS 132
           LDK I+ L M LV AR  R+             SGK N+     K+K  MVIGINTAFSS
Sbjct: 79  LDKSISNLEMKLVAARAERE-----------SLSGKFNISNEAKKRKYFMVIGINTAFSS 138

Query: 133 RRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           R+RRDSVR TWMP+GE L +LE EKGI+VRF+IGH
Sbjct: 139 RKRRDSVRSTWMPQGENLKKLEEEKGIIVRFVIGH 162

[Close]

BLAST of Lsi04G023570 vs. TAIR10
Match: AT2G32430.1 (AT2G32430.1 Galactosyltransferase family protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.1e-19
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLP-KKKMLMVIGINTAFSSRR 131
           +LDK I+ L M+L  AR++++  S  +  P      K  LP K++ LMV+GINTAFSSR+
Sbjct: 97  TLDKTISSLEMELAAARSAQE--SLVNGAPISNDMEKKQLPGKRRYLMVVGINTAFSSRK 156

Query: 132 RRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RRDSVR TWMP GEK  +LE EKGI++RF+IGH
Sbjct: 157 RRDSVRTTWMPSGEKRKKLEEEKGIIIRFVIGH 187

[Close]

BLAST of Lsi04G023570 vs. TAIR10
Match: AT1G77810.1 (AT1G77810.1 Galactosyltransferase family protein)

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-19
Identity = 50/92 (54.35%), Postives = 65/92 (70.65%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDK ++ L+      R+S++M             G    P+KK+ MV+GINTAFSSR+R
Sbjct: 89  SLDKSVSTLS----STRSSQEM-----------VDGSETNPRKKVFMVMGINTAFSSRKR 148

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMP+GEKL +LE+EKGIV++FMIGH
Sbjct: 149 RDSVRETWMPQGEKLERLEQEKGIVIKFMIGH 165

[Close]

BLAST of Lsi04G023570 vs. TAIR10
Match: AT1G05170.2 (AT1G05170.2 Galactosyltransferase family protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.0e-18
Identity = 48/93 (51.61%), Postives = 67/93 (72.04%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVN-LPKKKMLMVIGINTAFSSRR 131
           +LDK I+ L M+L  AR+ ++  S  +  P  +  GK     +++ LMV+GINTAFSSR+
Sbjct: 95  TLDKTISSLEMELAAARSVQE--SLQNGAPLSDDMGKKQPQEQRRFLMVVGINTAFSSRK 154

Query: 132 RRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RRDS+R TWMP+GEK  +LE EKGI++RF+IGH
Sbjct: 155 RRDSIRATWMPQGEKRKRLEEEKGIIIRFVIGH 185

[Close]

BLAST of Lsi04G023570 vs. NCBI nr
Match: gi|778694510|ref|XP_011653825.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 6.9e-41
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDKKITMLNMDLVEARNSR+MHSSDS+TPSIESSGK NLPKKKMLMVIGINTAFSSRRR
Sbjct: 83  SLDKKITMLNMDLVEARNSREMHSSDSHTPSIESSGKSNLPKKKMLMVIGINTAFSSRRR 142

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH
Sbjct: 143 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 174

[Close]

BLAST of Lsi04G023570 vs. NCBI nr
Match: gi|778694506|ref|XP_011653824.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis sativus])

HSP 1 Score: 175.6 bits (444), Expect = 6.9e-41
Identity = 89/92 (96.74%), Postives = 91/92 (98.91%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDKKITMLNMDLVEARNSR+MHSSDS+TPSIESSGK NLPKKKMLMVIGINTAFSSRRR
Sbjct: 84  SLDKKITMLNMDLVEARNSREMHSSDSHTPSIESSGKSNLPKKKMLMVIGINTAFSSRRR 143

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH
Sbjct: 144 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 175

[Close]

BLAST of Lsi04G023570 vs. NCBI nr
Match: gi|659086799|ref|XP_008444116.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 4.5e-40
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDKKITMLNMDLVEARNSR MHSSDS TPSIESSGK NLPKKKMLMVIGINTAFSSRRR
Sbjct: 84  SLDKKITMLNMDLVEARNSRGMHSSDSRTPSIESSGKSNLPKKKMLMVIGINTAFSSRRR 143

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH
Sbjct: 144 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 175

[Close]

BLAST of Lsi04G023570 vs. NCBI nr
Match: gi|659086801|ref|XP_008444117.1| (PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 4.5e-40
Identity = 89/92 (96.74%), Postives = 89/92 (96.74%), Query Frame = 1


Query: 72  SLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVNLPKKKMLMVIGINTAFSSRRR 131
           SLDKKITMLNMDLVEARNSR MHSSDS TPSIESSGK NLPKKKMLMVIGINTAFSSRRR
Sbjct: 83  SLDKKITMLNMDLVEARNSRGMHSSDSRTPSIESSGKSNLPKKKMLMVIGINTAFSSRRR 142

Query: 132 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH
Sbjct: 143 RDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 174

[Close]

BLAST of Lsi04G023570 vs. NCBI nr
Match: gi|947069936|gb|KRH18827.1| (hypothetical protein GLYMA_13G084600 [Glycine max])

HSP 1 Score: 118.2 bits (295), Expect = 1.3e-23
Identity = 63/109 (57.80%), Postives = 81/109 (74.31%), Query Frame = 1


Query: 56  MNKNFKSSLKIAQLRSSLDKKITMLNMDLVEARNSRDMHSSDSYTPSIESSGKVN-LPKK 115
           M+KN K    I  L+ SLDK+++ML M+L  AR++R+   SD    ++ S       P+K
Sbjct: 1   MSKNCKWCQGIVLLKRSLDKQVSMLQMELAAARSTREHKISDGSANTLASGVSTEGPPRK 60

Query: 116 KMLMVIGINTAFSSRRRRDSVRETWMPRGEKLFQLEREKGIVVRFMIGH 164
           K+ +VIGINTAFSSR+RRDSVRETWMP+GE+L QLEREKGIV+RFMIGH
Sbjct: 61  KVFVVIGINTAFSSRKRRDSVRETWMPQGEQLLQLEREKGIVIRFMIGH 109

The following BLAST results are available for this feature:

BLAST of Lsi04G023570 vs. Swiss-Prot


Match Name	E-value	Identity	Description
B3GT5_ARATH	9.7e-19	49.53	Probable beta-1,3-galactosyltransferase 5 OS=Arabidopsis thaliana GN=B3GALT5 PE=...	[more]
B3GT1_ARATH	1.7e-18	56.84	Probable beta-1,3-galactosyltransferase 1 OS=Arabidopsis thaliana GN=B3GALT1 PE=...	[more]
B3GT3_ARATH	3.7e-18	54.84	Probable beta-1,3-galactosyltransferase 3 OS=Arabidopsis thaliana GN=B3GALT3 PE=...	[more]
B3GT7_ARATH	4.8e-18	54.35	Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1	[more]
B3GT2_ARATH	1.8e-17	51.61	Probable beta-1,3-galactosyltransferase 2 OS=Arabidopsis thaliana GN=B3GALT2 PE=...	[more]

BLAST of Lsi04G023570 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KY94_CUCSA	4.8e-41	96.74	Hexosyltransferase OS=Cucumis sativus GN=Csa_4G377730 PE=3 SV=1	[more]
A0A0R0GV77_SOYBN	9.2e-24	57.80	Hexosyltransferase OS=Glycine max GN=GLYMA_13G084600 PE=3 SV=1	[more]
G7J458_MEDTR	2.0e-23	56.52	Hexosyltransferase OS=Medicago truncatula GN=MTR_3g073370 PE=2 SV=1	[more]
G7J459_MEDTR	2.0e-23	56.52	Beta-1,3-galactosyltransferase-like protein OS=Medicago truncatula GN=MTR_3g0733...	[more]
B7FF80_MEDTR	2.0e-23	56.52	Hexosyltransferase (Fragment) OS=Medicago truncatula PE=2 SV=1	[more]

BLAST of Lsi04G023570 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G22015.1	5.5e-20	49.53	Galactosyltransferase family protein	[more]
AT1G11730.1	9.4e-20	56.84	Galactosyltransferase family protein	[more]
AT2G32430.1	2.1e-19	54.84	Galactosyltransferase family protein	[more]
AT1G77810.1	2.7e-19	54.35	Galactosyltransferase family protein	[more]
AT1G05170.2	1.0e-18	51.61	Galactosyltransferase family protein	[more]

BLAST of Lsi04G023570 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778694510\|ref\|XP_011653825.1\|	6.9e-41	96.74	PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis sativus]	[more]
gi\|778694506\|ref\|XP_011653824.1\|	6.9e-41	96.74	PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis sativus]	[more]
gi\|659086799\|ref\|XP_008444116.1\|	4.5e-40	96.74	PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X1 [Cucumis melo]	[more]
gi\|659086801\|ref\|XP_008444117.1\|	4.5e-40	96.74	PREDICTED: beta-1,3-galactosyltransferase 7-like isoform X2 [Cucumis melo]	[more]
gi\|947069936\|gb\|KRH18827.1\|	1.3e-23	57.80	hypothetical protein GLYMA_13G084600 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008378	galactosyltransferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006486	protein glycosylation

Vocabulary: **INTERPRO**
Term	Definition
IPR002659	Glyco_trans_31

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0030206	chondroitin sulfate biosynthetic process
cellular_component	GO:0000139	Golgi membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
cellular_component	GO:0005794	Golgi apparatus
molecular_function	GO:0008378	galactosyltransferase activity
molecular_function	GO:0047220	galactosylxylosylprotein 3-beta-galactosyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G023570.1	Lsi04G023570.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002659	Glycosyl transferase, family 31	PANTHER	PTHR11214	BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE	coord: 55..163 score: 2.2
None	No IPR available	PANTHER	PTHR11214:SF74	BETA-1,3-GALACTOSYLTRANSFERASE 7-RELATED	coord: 55..163 score: 2.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G023570	MELO3C010434.2	Melon (DHL92) v3.6.1	lsimedB338
Lsi04G023570	Cla97C11G221510	Watermelon (97103) v2	lsiwmbB267
Lsi04G023570	Bhi09G002210	Wax gourd	lsiwgoB393
Lsi04G023570	Cp4.1LG02g03400	Cucurbita pepo (Zucchini)	cpelsiB455
Lsi04G023570	Cp4.1LG06g05000	Cucurbita pepo (Zucchini)	cpelsiB636
Lsi04G023570	CsGy4G017340	Cucumber (Gy14) v2	cgyblsiB270
Lsi04G023570	Carg00358	Silver-seed gourd	carlsiB609
Lsi04G023570	Carg03068	Silver-seed gourd	carlsiB575
Lsi04G023570	CsaV3_4G028630	Cucumber (Chinese Long) v3	cuclsiB313

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G023570	Cucurbita maxima (Rimu)	cmalsiB022
Lsi04G023570	Cucurbita maxima (Rimu)	cmalsiB027
Lsi04G023570	Cucurbita maxima (Rimu)	cmalsiB282
Lsi04G023570	Cucurbita maxima (Rimu)	cmalsiB431
Lsi04G023570	Cucurbita maxima (Rimu)	cmalsiB673
Lsi04G023570	Cucurbita moschata (Rifu)	cmolsiB010
Lsi04G023570	Cucurbita moschata (Rifu)	cmolsiB015
Lsi04G023570	Cucurbita moschata (Rifu)	cmolsiB271
Lsi04G023570	Cucurbita moschata (Rifu)	cmolsiB420
Lsi04G023570	Cucurbita moschata (Rifu)	cmolsiB664
Lsi04G023570	Cucurbita pepo (Zucchini)	cpelsiB147
Lsi04G023570	Cucurbita pepo (Zucchini)	cpelsiB356
Lsi04G023570	Cucurbita pepo (Zucchini)	cpelsiB641
Lsi04G023570	Wild cucumber (PI 183967)	cpilsiB292
Lsi04G023570	Wild cucumber (PI 183967)	cpilsiB378
Lsi04G023570	Cucumber (Chinese Long) v2	culsiB292
Lsi04G023570	Cucumber (Chinese Long) v2	culsiB375
Lsi04G023570	Melon (DHL92) v3.5.1	lsimeB280
Lsi04G023570	Melon (DHL92) v3.5.1	lsimeB322
Lsi04G023570	Watermelon (Charleston Gray)	lsiwcgB260
Lsi04G023570	Watermelon (Charleston Gray)	lsiwcgB279
Lsi04G023570	Watermelon (97103) v1	lsiwmB334
Lsi04G023570	Melon (DHL92) v3.6.1	lsimedB296
Lsi04G023570	Silver-seed gourd	carlsiB152
Lsi04G023570	Silver-seed gourd	carlsiB757
Lsi04G023570	Watermelon (97103) v2	lsiwmbB280
Lsi04G023570	Wax gourd	lsiwgoB349