BLAST of Lsi04G021540 vs. Swiss-Prot
Match:
PP375_ARATH (Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidopsis thaliana GN=At5g11310 PE=2 SV=1)
HSP 1 Score: 611.3 bits (1575), Expect = 1.2e-173
Identity = 321/604 (53.15%), Postives = 420/604 (69.54%), Query Frame = 1
Query: 10 FYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGNPLQSNSAVI 69
F R L + HR+ F L S S+ P I+ P++PD + P Q N+
Sbjct: 8 FRRNLLLNPNPHRNFFLHRLLSSSRRSSPLIPVEPLIQRIQSPAVPDSTCTPPQQNTV-- 67
Query: 70 SNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNH 129
DLSTIS +L + V G++LE ALD TGI PS L+ A+F+
Sbjct: 68 ---------------SKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDR 127
Query: 130 FDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRRLRGDEVSSL 189
SSP LHS+F WAE KPGF S +LF+ ++N L K+REF+ AWSL+ R+R DE S+L
Sbjct: 128 LSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNL 187
Query: 190 VSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDSLCKEGHVRV 249
VS D F++LIRRYARAGM+Q AIR FEFA + E + + +E L E+LLD+LCKEGHVR
Sbjct: 188 VSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVRE 247
Query: 250 ASEYFNR-KREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGT 309
AS Y R MDS + PS+R +NILLNGWFRSRKLK AE+LW EMK + PTVVTYGT
Sbjct: 248 ASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 307
Query: 310 LVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLE 369
L+EGYCRMRRV+ A+E+++EM+ +E N +++NPI+D GEAGR EALGMMERF V E
Sbjct: 308 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 367
Query: 370 QGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGM 429
GPTI TYNSL+K +CKA DL GASKILK M+ RG PT TTYN+FF++FSK+ K EEGM
Sbjct: 368 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 427
Query: 430 NLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATSTMLVHLL 489
NLY K+IE+G++PD+LTYHL+LKMLCE+ +L+LA QV EMK RG D DL T+TML+HLL
Sbjct: 428 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 487
Query: 490 CKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKL 549
C++ EEAF EF++ + RGI+PQY+TF + + +G++ MA +L +MSS+PHS+KL
Sbjct: 488 CRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKL 547
Query: 550 PDTYNQTPDS--IRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSANRLIDD 609
P+TY + D+ + RR SI+ +AEAMS++LK C++PR+LVK R + AV LIDD
Sbjct: 548 PNTYREAVDAPPDKDRRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKAVGEDINLIDD 594
BLAST of Lsi04G021540 vs. Swiss-Prot
Match:
PP150_ARATH (Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidopsis thaliana GN=At2g13420 PE=2 SV=1)
HSP 1 Score: 211.8 bits (538), Expect = 2.0e-53
Identity = 136/443 (30.70%), Postives = 219/443 (49.44%), Query Frame = 1
Query: 107 LEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAK 166
+E +L GI + +L+ + K S F + + P ++ FN +I++L +
Sbjct: 58 MESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGR 117
Query: 167 SREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFA-CNLETIS 226
R+FD LI+ D+ S + F+IL++R AG+ + A+R F+ A C LE
Sbjct: 118 VRQFDVVRQLIVEM---DQTSP----ETFLILVKRLIAAGLTRQAVRAFDDAPCFLENRR 177
Query: 227 GTNSEGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKH 286
E F LLD+LCK G+ ++A FN ++E F + Y IL+ GW + R++
Sbjct: 178 FRLVE--FGFLLDTLCKYGYTKMAVGVFNERKEE---FGSDEKVYTILIAGWCKLRRIDM 237
Query: 287 AERLWFEMKKNKISPTVVTYGTLVEGYCRM----------RRVERAIELVDEMRGEGIEP 346
AE+ EM ++ I P VVTY L+ G CR R V A ++ DEMR GIEP
Sbjct: 238 AEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEP 297
Query: 347 NAIIYNPIVDAFGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASKIL 406
+ ++ ++ + A + + L M+ PTI TY S++K C L A ++L
Sbjct: 298 DVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELL 357
Query: 407 KSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEE 466
++M+ G +P+ TYN FF+ + MNLY KM P TY++LL
Sbjct: 358 ETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINL 417
Query: 467 ERLNLAAQVCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTF 526
++ ++ +++KA DL + T LVH LC K++EA F MI RG +PQ LTF
Sbjct: 418 GKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTF 477
Query: 527 CRLHDEFMKRGLTKMASKLQEMM 539
L+ ++ + +L++ +
Sbjct: 478 ETLYKGLIQSNKMRTWRRLKKKL 488
BLAST of Lsi04G021540 vs. Swiss-Prot
Match:
PP129_ARATH (Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidopsis thaliana GN=At1g77360 PE=2 SV=2)
HSP 1 Score: 202.2 bits (513), Expect = 1.6e-50
Identity = 129/436 (29.59%), Postives = 218/436 (50.00%), Query Frame = 1
Query: 107 LEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAK 166
L+ ALD++G+ S ++E V N F ++ + F W+E + + S ++ +I AK
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146
Query: 167 SREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISG 226
R++ W LI + +++V+ F I++R+YARA + AI F +E
Sbjct: 147 IRQYKLMWDLINAMRK----KKMLNVETFCIVMRKYARAQKVDEAIYAFNV---MEKYDL 206
Query: 227 TNSEGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHA 286
+ F LL +LCK +VR A E F M F P + Y+ILL GW + L A
Sbjct: 207 PPNLVAFNGLLSALCKSKNVRKAQEVF---ENMRDRFTPDSKTYSILLEGWGKEPNLPKA 266
Query: 287 ERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDA 346
++ EM P +VTY +V+ C+ RV+ A+ +V M +P IY+ +V
Sbjct: 267 REVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 326
Query: 347 FGEAGRFKEALGMMERFMVLEQG---PTISTYNSLIKGYCKARDLSGASKILKSMIGRGF 406
+G R +EA ++ F+ +E+ ++ +NSLI +CKA + ++LK M +G
Sbjct: 327 YGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 386
Query: 407 TPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQ 466
TP + N R + G+ +E +++ KMI+ PD TY +++KM CE++ + A +
Sbjct: 387 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADK 446
Query: 467 VCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFM 526
V M+ +G + T ++L++ LC+ ++A E MI GI P +TF RL +
Sbjct: 447 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 506
Query: 527 KRGLTKMASKLQEMMS 540
K + L E M+
Sbjct: 507 KEEREDVLKFLNEKMN 508
BLAST of Lsi04G021540 vs. Swiss-Prot
Match:
PP248_ARATH (Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidopsis thaliana GN=At3g22670 PE=2 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 8.1e-50
Identity = 123/434 (28.34%), Postives = 213/434 (49.08%), Query Frame = 1
Query: 111 LDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREF 170
L + +V + SL+ V F + + F+WA ++ G+ S +N +++VL K R F
Sbjct: 123 LSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNF 182
Query: 171 DSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE 230
D W L+ + +E S LV++D ++RR A++G A+ F +E G ++
Sbjct: 183 DLMWELV-NEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF---LEMEKSYGVKTD 242
Query: 231 GL-FEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERL 290
+ L+D+L KE + A E F + + +P R +NIL++G+ ++RK A +
Sbjct: 243 TIAMNSLMDALVKENSIEHAHEVFLK---LFDTIKPDARTFNILIHGFCKARKFDDARAM 302
Query: 291 WFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGE 350
MK + +P VVTY + VE YC+ R E+++EMR G PN + Y ++ + G+
Sbjct: 303 MDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGK 362
Query: 351 AGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTT 410
+ + EALG+ E+ P Y+SLI K A++I + M +G
Sbjct: 363 SKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV 422
Query: 411 YNYFFRFFSKYGKIEEGMNLYNKMIE---SGYAPDKLTYHLLLKMLCEEERLNLAAQVCN 470
YN + + E + L +M + +P+ TY LLKM C ++++ L + +
Sbjct: 423 YNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLH 482
Query: 471 EMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRG 530
M +D++T +L+ LC K EEA FE + +G+VP+ T L DE K+
Sbjct: 483 HMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 542
Query: 531 LTKMASKLQEMMSS 541
+ + K+Q ++ S
Sbjct: 543 MAEAKLKIQSLVQS 549
BLAST of Lsi04G021540 vs. Swiss-Prot
Match:
PP447_ARATH (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana GN=At5g65820 PE=3 SV=1)
HSP 1 Score: 199.9 bits (507), Expect = 8.1e-50
Identity = 123/436 (28.21%), Postives = 215/436 (49.31%), Query Frame = 1
Query: 107 LEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAK 166
LE AL+ +G+ L+E V N + + F+WA +P +C S ++ ++ +L+K
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 167 SREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISG 226
R+F + W LI + E L+ ++FV+L++R+A A M++ AI + +
Sbjct: 160 MRQFGAVWGLIEEMRK--ENPQLIEPELFVVLVQRFASADMVKKAIEVLD---EMPKFGF 219
Query: 227 TNSEGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHA 286
E +F LLD+LCK G V+ A++ F +M F ++R + LL GW R K+ A
Sbjct: 220 EPDEYVFGCLLDALCKHGSVKDAAKLFE---DMRMRFPVNLRYFTSLLYGWCRVGKMMEA 279
Query: 287 ERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDA 346
+ + +M + P +V Y L+ GY ++ A +L+ +MR G EPNA Y ++ A
Sbjct: 280 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 339
Query: 347 FGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPT 406
+ R +EA+ + E + TY +L+ G+CK + +L MI +G P+
Sbjct: 340 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 399
Query: 407 PTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCN 466
TY + K EE + L KM + Y PD Y++++++ C+ + A ++ N
Sbjct: 400 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 459
Query: 467 EMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGI--VPQYLTFCRLHDEFMK 526
EM+ G + T ++++ L EA F+ M+ RG+ V QY T L + +K
Sbjct: 460 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 519
Query: 527 RGLTKMASKLQEMMSS 541
+MA + ++S
Sbjct: 520 DKKLEMAKDVWSCITS 527
BLAST of Lsi04G021540 vs. TrEMBL
Match:
A0A0A0LEE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G878910 PE=4 SV=1)
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 555/614 (90.39%), Postives = 576/614 (93.81%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MPI KP +L YR+LH+I+HNH S+FR SALQFSSLS HSWLSTPGKPL+KWPSLPDQ N
Sbjct: 1 MPIHKPLILIYRILHSIQHNHPSSFRFSALQFSSLSPHSWLSTPGKPLVKWPSLPDQPAN 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
PL SNSAVISNPN AID+KFEAS+ PNDLSTIS ILSDR VR GAALEDALDRTGIVPSS
Sbjct: 61 PLPSNSAVISNPNSAIDVKFEASYSPNDLSTISSILSDRSVRPGAALEDALDRTGIVPSS 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
SLLEAVF+HFDSSPKFLHSLFLWA K GF S ALFN LINVLAKSREFDSAWSLI R
Sbjct: 121 SLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSEGLFEILLDSL 240
LRG E S LVSV+VFVILIRRYARAGM+QPAIRT+EFACNLETISGT SEGLFEILLDSL
Sbjct: 181 LRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGSEGLFEILLDSL 240
Query: 241 CKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISP 300
CKEGHVRVASEYFNRKREM S FEPSIRAYNIL+NGWFRSRKLKHA+RLWFEMKKNKISP
Sbjct: 241 CKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISP 300
Query: 301 TVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMM 360
TVVTYGTL+EGYCRMR VE AIELVDEMR EGIEPNAI+YNPIVDA GEAGRFKEALGMM
Sbjct: 301 TVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMM 360
Query: 361 ERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKY 420
ERFMVLEQGPTISTYNSL+KGYCKA DLSGASKILK MIGRGFTPTPTTYNYFFRFFSKY
Sbjct: 361 ERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKY 420
Query: 421 GKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATS 480
GKIEE M+LYNKMIESGYAPDKLTYHLLLKMLCEEERLNLA QVCNEMKARGFDMDLATS
Sbjct: 421 GKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATS 480
Query: 481 TMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS 540
TML+HLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS
Sbjct: 481 TMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS 540
Query: 541 VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSAN 600
VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSE+AVFSAN
Sbjct: 541 VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSEDAVFSAN 600
Query: 601 RLIDDIKKKANPVT 615
+LIDDIKKKANP T
Sbjct: 601 KLIDDIKKKANPGT 614
BLAST of Lsi04G021540 vs. TrEMBL
Match:
M5XNZ3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003040mg PE=4 SV=1)
HSP 1 Score: 783.5 bits (2022), Expect = 1.9e-223
Identity = 399/612 (65.20%), Postives = 470/612 (76.80%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MP K R L + N R +L+F S SWLS G P+IKWPS PD +
Sbjct: 1 MPSHKTRHFLSLALLLFKPNPNLNLRALSLRF--FSNQSWLSVRGNPIIKWPSPPDIPCS 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
N A NPNP +F ND STI+ +L+D + G++L+ ALDRTGI P
Sbjct: 61 LPHPNPAPNPNPNPN---SSGPNFSQNDFSTIANVLADPSISPGSSLQSALDRTGIEPGP 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
LL+AVF+HFDSSPK LH+LFLWAE +PGF SS LF C+INVLAKSREF+SAWSLI+ R
Sbjct: 121 CLLQAVFDHFDSSPKLLHTLFLWAEKRPGFRSSATLFGCMINVLAKSREFESAWSLILNR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDS 240
+ GDE LVSVD FVI+IRRY+RAGM Q AIRTFEFA NL++ + SE LFE+LLDS
Sbjct: 181 IGGDEEPGLVSVDTFVIMIRRYSRAGMSQSAIRTFEFASNLDSFLNSESEMSLFEVLLDS 240
Query: 241 LCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKIS 300
LCKEG VRVASEYF+ KR++ + PS+R YNILLNGWFRSRKLK AERLW EMK++ +
Sbjct: 241 LCKEGLVRVASEYFDMKRKLHPDWIPSVRVYNILLNGWFRSRKLKRAERLWAEMKRDNVK 300
Query: 301 PTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGM 360
P+VVTYGTL+EGYCRMRR E AIELV EMR EGIEPNAI+YN I+DA GEAG+FKEALGM
Sbjct: 301 PSVVTYGTLIEGYCRMRRAEIAIELVSEMRSEGIEPNAIVYNAIIDALGEAGKFKEALGM 360
Query: 361 MERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSK 420
ME F+VLE GPTISTYNSL KG+CKA DL GASKILK MI +G PTPTTYNYFFR+FSK
Sbjct: 361 MEHFLVLESGPTISTYNSLAKGFCKAGDLVGASKILKMMISKGCVPTPTTYNYFFRYFSK 420
Query: 421 YGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLAT 480
+GKIEEGMNLY KMIESGY PD+LT+HLLLKMLC+E RL LA QV EM++RG DMDLAT
Sbjct: 421 FGKIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCDEGRLGLAVQVSKEMRSRGLDMDLAT 480
Query: 481 STMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 540
STML+HLLC +HKF+EAFAEFE MI RG+VPQYLTF R++ E K+G+T+MA K+ MMS
Sbjct: 481 STMLIHLLCNVHKFKEAFAEFEDMIRRGLVPQYLTFQRMNVELRKQGMTEMAHKMCNMMS 540
Query: 541 SVPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSA 600
SVPHS LP+TY + D+ ARR SI++KAEAMS++LK C DPRELVK RS EN V A
Sbjct: 541 SVPHSTNLPNTYVRERDASHARRKSIIQKAEAMSDLLKTCSDPRELVKYRSLPENVVSRA 600
Query: 601 NRLIDDIKKKAN 612
N+L++DIK+KAN
Sbjct: 601 NQLVEDIKRKAN 607
BLAST of Lsi04G021540 vs. TrEMBL
Match:
W9SQG5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_007369 PE=4 SV=1)
HSP 1 Score: 761.5 bits (1965), Expect = 7.7e-217
Identity = 386/578 (66.78%), Postives = 455/578 (78.72%), Query Frame = 1
Query: 33 SSLSAHSWLSTPGKPLIKWPSLPDQSGNPLQSNSAVISNPNPAIDLKFEASFEPNDLSTI 92
SS S SWLS PGKPLI+WP P NP + +PNP A F N+ + I
Sbjct: 43 SSASGLSWLSVPGKPLIRWPHEPCSVPNPQPDPNP---SPNPG------AEFSQNEFAAI 102
Query: 93 SGILSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCS 152
S +L++ + G +L ALDRTGI PS SLL+AVF+HFDSSPK L+SLFLWAE +PG+ S
Sbjct: 103 SEVLTNPNISGGFSLHTALDRTGIEPSPSLLQAVFDHFDSSPKLLYSLFLWAEKQPGYRS 162
Query: 153 SKALFNCLINVLAKSREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAI 212
S +LF +INVLAKSREFDSAWSLI+ R+ +E LV D FVI+IRRYAR GM Q A+
Sbjct: 163 SASLFASVINVLAKSREFDSAWSLILHRIGKEEEPRLVCEDTFVIMIRRYAREGMPQSAV 222
Query: 213 RTFEFACNLETISGTNSE-GLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYN 272
RTFEFA N I SE LF ILLD+LCKEGHVR AS+YFN K+++D + PSIRAYN
Sbjct: 223 RTFEFASNSVPICSYISEISLFGILLDALCKEGHVRAASDYFNEKKKLDPSWIPSIRAYN 282
Query: 273 ILLNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGE 332
ILLNGWFRSRKLK AERLW EMK++ + TVVTYGTLVEGYCRMRR E A+ELV EMR E
Sbjct: 283 ILLNGWFRSRKLKRAERLWMEMKRDNVRSTVVTYGTLVEGYCRMRRAEIAVELVKEMRTE 342
Query: 333 GIEPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGA 392
GIEPNAI+YNPI+DA GEAGRFKEALGMMERF+VLE GPTISTYNSL+KG+CKA +L+GA
Sbjct: 343 GIEPNAIVYNPIIDALGEAGRFKEALGMMERFLVLESGPTISTYNSLVKGFCKAGNLAGA 402
Query: 393 SKILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKM 452
SKI+K MIGRG PTPTTYNYFF++FSK+GKIEEGMNLY KMI SG++PD+LTYHLLLKM
Sbjct: 403 SKIIKMMIGRGIIPTPTTYNYFFKYFSKFGKIEEGMNLYTKMIGSGHSPDRLTYHLLLKM 462
Query: 453 LCEEERLNLAAQVCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQ 512
LCEE +L+LA QV EM++RGFDMDLATSTML+HL C M +FEEA+ EF MI RGIVPQ
Sbjct: 463 LCEEGKLDLAVQVGKEMRSRGFDMDLATSTMLIHLFCNMRRFEEAYLEFGDMIRRGIVPQ 522
Query: 513 YLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTYNQTPDSIRARRTSIMRKAEA 572
YLT+ R+ DE KRG+T+M SKL+++MSSVPHS KLP+TY + D+ RR S+MRKAEA
Sbjct: 523 YLTYHRMKDELKKRGMTEMVSKLRDLMSSVPHSTKLPNTYTRDGDASSDRRNSVMRKAEA 582
Query: 573 MSEMLKVCKDPRELVKRRSPSENAVFSANRLIDDIKKK 610
+S+MLK CK+ RELV R P ENAV ANRLI+DI+KK
Sbjct: 583 ISDMLKTCKESRELVNYRGPFENAVSLANRLIEDIQKK 611
BLAST of Lsi04G021540 vs. TrEMBL
Match:
B9H9Q3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26360g PE=4 SV=1)
HSP 1 Score: 755.7 bits (1950), Expect = 4.2e-215
Identity = 385/579 (66.49%), Postives = 451/579 (77.89%), Query Frame = 1
Query: 36 SAHSWLSTPGKPLIKWPSLPDQSGNPL--QSNSAVISNPNPAIDLKFEASFEPNDLSTIS 95
SA SWL+ G PLIKWP P+ + +P Q NS+ SN NP ++ ND T+
Sbjct: 35 SAESWLAVQGNPLIKWPHNPNLAPSPSADQQNSSPTSNSNP--------NYHQNDFFTLC 94
Query: 96 GILSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSS 155
IL D ++ G +L ALDRTGI P L+++VF+HFDSSPK LHS+FLWAE KPGF SS
Sbjct: 95 NILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSS 154
Query: 156 KALFNCLINVLAKSREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIR 215
ALFN ++N L K+REF SAW L++ R+ G+E LVS D F ILIRRY RAGM + AIR
Sbjct: 155 AALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIR 214
Query: 216 TFEFACNLETISGTNS-EGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNI 275
TFE+A +L+ I + + LFEILLDSLCKEGHVRVA++YF+RK E D C+ PS+R YNI
Sbjct: 215 TFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNI 274
Query: 276 LLNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEG 335
LLNGWFRSRKLKHAERLW EMKK + P+VVTYGTLVEGY RMRRVERAIELVDEM+ EG
Sbjct: 275 LLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREG 334
Query: 336 IEPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGAS 395
I+ NAI+YNPI+DA EAGRFKE LGMME F + E+GPTISTYNSL+KGYCKA DL GAS
Sbjct: 335 IKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGAS 394
Query: 396 KILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKML 455
KILK MI R PTPTTYNYFFR FSK KIEEGMNLY KMIESGY PD+LTYHLLLKML
Sbjct: 395 KILKMMISREVFPTPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKML 454
Query: 456 CEEERLNLAAQVCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQY 515
CEEERL+LA Q+ EM+ARG DMDLATSTM HLLCKM +FEEAFAEFE M+ RGIVPQY
Sbjct: 455 CEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRRGIVPQY 514
Query: 516 LTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTYNQTPDSIR-ARRTSIMRKAEA 575
LTF RL+DEF K+GLT++A +L ++MSSV HS+ LP+TYN D+ R ARR SI++KA
Sbjct: 515 LTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNLPNTYNVDRDASRHARRKSILQKAGV 574
Query: 576 MSEMLKVCKDPRELVKRRSPSENAVFSANRLIDDIKKKA 611
MSE+LK C DPRELVK RS S+N SAN+LI+DIKK+A
Sbjct: 575 MSEILKTCNDPRELVKHRSSSQNPESSANQLIEDIKKRA 605
BLAST of Lsi04G021540 vs. TrEMBL
Match:
A0A061GPP0_THECC (Pentatricopeptide repeat superfamily protein isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_038312 PE=4 SV=1)
HSP 1 Score: 740.3 bits (1910), Expect = 1.8e-210
Identity = 384/577 (66.55%), Postives = 447/577 (77.47%), Query Frame = 1
Query: 36 SAHSWLSTPGKPLIKWPSLPDQSGNPLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGI 95
S SWLS PLIKWP +S+ + P+P + F S + S IS +
Sbjct: 15 SDQSWLSKKRNPLIKWPP----------PSSSPCNQPHPIPNRTFSQS----NFSIISNL 74
Query: 96 LSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKA 155
L + + SG++LE ALD+T I P LL+A+F FDSSPK LH LFLWAE KPGF SS
Sbjct: 75 LKNSTITSGSSLESALDQTEIDPDPGLLQAIFECFDSSPKLLHHLFLWAEKKPGFKSSAT 134
Query: 156 LFNCLINVLAKSREFDSAWSLIIRRLR-GDEVSSLVSVDVFVILIRRYARAGMLQPAIRT 215
LF+ ++NVL K+R F+ AWSL++ R+ G E S+LVSV+ FVILIRRYARAGM QPAIRT
Sbjct: 135 LFDSMVNVLGKARGFEDAWSLVLDRIGDGMEGSTLVSVNTFVILIRRYARAGMPQPAIRT 194
Query: 216 FEFACNLETISGTNSE-GLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNIL 275
FEFA +LE I ++ E LFEI+LDSLCKEGHVRV SEY RKRE D + PSI+ YNIL
Sbjct: 195 FEFAKSLEQICNSDEETNLFEIMLDSLCKEGHVRVVSEYLTRKRETDLGWVPSIKVYNIL 254
Query: 276 LNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGI 335
LNGWFRSRKLKHAERLW +MKK + P+VVTYGTLVEGYC MRRVERAI+LVDEM+G GI
Sbjct: 255 LNGWFRSRKLKHAERLWLDMKKEGVLPSVVTYGTLVEGYCTMRRVERAIQLVDEMKGVGI 314
Query: 336 EPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASK 395
EPNA +YNPI+DA GEAGR KEALGMMER + E GP IS Y+SL+KGYCKARDL GASK
Sbjct: 315 EPNAKVYNPIIDALGEAGRLKEALGMMERVFLCESGPNISMYSSLVKGYCKARDLVGASK 374
Query: 396 ILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLC 455
ILK MI RGF PTPTTYNYFFR+FS++ KIEE MNLY KMIESG+ PD+LTYHLLLKML
Sbjct: 375 ILKMMISRGFIPTPTTYNYFFRYFSQFRKIEEAMNLYTKMIESGHTPDRLTYHLLLKMLF 434
Query: 456 EEERLNLAAQVCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYL 515
EEERL+LA Q+ EM+ARG+D DLATSTML+HLLCKMH+FE+AF EFE MI RG+ PQYL
Sbjct: 435 EEERLDLAVQISKEMRARGYDRDLATSTMLIHLLCKMHRFEDAFGEFEDMIRRGMAPQYL 494
Query: 516 TFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMS 575
TF R++DE KRG+T MASKL +MMSSV S+KLP+TY DS RARRTSIMRKAEAMS
Sbjct: 495 TFQRMNDELKKRGMTDMASKLCDMMSSVRSSKKLPNTYGGDEDSSRARRTSIMRKAEAMS 554
Query: 576 EMLKVCKDPRELVKRRSPSENAVFSANRLIDDIKKKA 611
+MLK CKDPRE VK R+ SENAV SA RLI+ IK+ A
Sbjct: 555 DMLKTCKDPREFVKHRTLSENAVSSAGRLIEIIKEGA 577
BLAST of Lsi04G021540 vs. TAIR10
Match:
AT5G11310.1 (AT5G11310.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 611.3 bits (1575), Expect = 6.5e-175
Identity = 321/604 (53.15%), Postives = 420/604 (69.54%), Query Frame = 1
Query: 10 FYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGNPLQSNSAVI 69
F R L + HR+ F L S S+ P I+ P++PD + P Q N+
Sbjct: 8 FRRNLLLNPNPHRNFFLHRLLSSSRRSSPLIPVEPLIQRIQSPAVPDSTCTPPQQNTV-- 67
Query: 70 SNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNH 129
DLSTIS +L + V G++LE ALD TGI PS L+ A+F+
Sbjct: 68 ---------------SKTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDR 127
Query: 130 FDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRRLRGDEVSSL 189
SSP LHS+F WAE KPGF S +LF+ ++N L K+REF+ AWSL+ R+R DE S+L
Sbjct: 128 LSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNL 187
Query: 190 VSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDSLCKEGHVRV 249
VS D F++LIRRYARAGM+Q AIR FEFA + E + + +E L E+LLD+LCKEGHVR
Sbjct: 188 VSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVRE 247
Query: 250 ASEYFNR-KREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGT 309
AS Y R MDS + PS+R +NILLNGWFRSRKLK AE+LW EMK + PTVVTYGT
Sbjct: 248 ASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGT 307
Query: 310 LVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLE 369
L+EGYCRMRRV+ A+E+++EM+ +E N +++NPI+D GEAGR EALGMMERF V E
Sbjct: 308 LIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCE 367
Query: 370 QGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGM 429
GPTI TYNSL+K +CKA DL GASKILK M+ RG PT TTYN+FF++FSK+ K EEGM
Sbjct: 368 SGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGM 427
Query: 430 NLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATSTMLVHLL 489
NLY K+IE+G++PD+LTYHL+LKMLCE+ +L+LA QV EMK RG D DL T+TML+HLL
Sbjct: 428 NLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLL 487
Query: 490 CKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKL 549
C++ EEAF EF++ + RGI+PQY+TF + + +G++ MA +L +MSS+PHS+KL
Sbjct: 488 CRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKL 547
Query: 550 PDTYNQTPDS--IRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSANRLIDD 609
P+TY + D+ + RR SI+ +AEAMS++LK C++PR+LVK R + AV LIDD
Sbjct: 548 PNTYREAVDAPPDKDRRKSILHRAEAMSDVLKGCRNPRKLVKMRGSHKKAVGEDINLIDD 594
BLAST of Lsi04G021540 vs. TAIR10
Match:
AT1G77360.1 (AT1G77360.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 202.2 bits (513), Expect = 9.2e-52
Identity = 129/436 (29.59%), Postives = 218/436 (50.00%), Query Frame = 1
Query: 107 LEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAK 166
L+ ALD++G+ S ++E V N F ++ + F W+E + + S ++ +I AK
Sbjct: 87 LDSALDQSGLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAK 146
Query: 167 SREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISG 226
R++ W LI + +++V+ F I++R+YARA + AI F +E
Sbjct: 147 IRQYKLMWDLINAMRK----KKMLNVETFCIVMRKYARAQKVDEAIYAFNV---MEKYDL 206
Query: 227 TNSEGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHA 286
+ F LL +LCK +VR A E F M F P + Y+ILL GW + L A
Sbjct: 207 PPNLVAFNGLLSALCKSKNVRKAQEVF---ENMRDRFTPDSKTYSILLEGWGKEPNLPKA 266
Query: 287 ERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDA 346
++ EM P +VTY +V+ C+ RV+ A+ +V M +P IY+ +V
Sbjct: 267 REVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHT 326
Query: 347 FGEAGRFKEALGMMERFMVLEQG---PTISTYNSLIKGYCKARDLSGASKILKSMIGRGF 406
+G R +EA ++ F+ +E+ ++ +NSLI +CKA + ++LK M +G
Sbjct: 327 YGTENRLEEA---VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 386
Query: 407 TPTPTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQ 466
TP + N R + G+ +E +++ KMI+ PD TY +++KM CE++ + A +
Sbjct: 387 TPNSKSCNIILRHLIERGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADK 446
Query: 467 VCNEMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFM 526
V M+ +G + T ++L++ LC+ ++A E MI GI P +TF RL +
Sbjct: 447 VWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLI 506
Query: 527 KRGLTKMASKLQEMMS 540
K + L E M+
Sbjct: 507 KEEREDVLKFLNEKMN 508
BLAST of Lsi04G021540 vs. TAIR10
Match:
AT3G22670.1 (AT3G22670.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 199.9 bits (507), Expect = 4.5e-51
Identity = 123/434 (28.34%), Postives = 213/434 (49.08%), Query Frame = 1
Query: 111 LDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREF 170
L + +V + SL+ V F + + F+WA ++ G+ S +N +++VL K R F
Sbjct: 123 LSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVDVLGKCRNF 182
Query: 171 DSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE 230
D W L+ + +E S LV++D ++RR A++G A+ F +E G ++
Sbjct: 183 DLMWELV-NEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF---LEMEKSYGVKTD 242
Query: 231 GL-FEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERL 290
+ L+D+L KE + A E F + + +P R +NIL++G+ ++RK A +
Sbjct: 243 TIAMNSLMDALVKENSIEHAHEVFLK---LFDTIKPDARTFNILIHGFCKARKFDDARAM 302
Query: 291 WFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGE 350
MK + +P VVTY + VE YC+ R E+++EMR G PN + Y ++ + G+
Sbjct: 303 MDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGK 362
Query: 351 AGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTT 410
+ + EALG+ E+ P Y+SLI K A++I + M +G
Sbjct: 363 SKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLV 422
Query: 411 YNYFFRFFSKYGKIEEGMNLYNKMIE---SGYAPDKLTYHLLLKMLCEEERLNLAAQVCN 470
YN + + E + L +M + +P+ TY LLKM C ++++ L + +
Sbjct: 423 YNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLH 482
Query: 471 EMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRG 530
M +D++T +L+ LC K EEA FE + +G+VP+ T L DE K+
Sbjct: 483 HMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKKN 542
Query: 531 LTKMASKLQEMMSS 541
+ + K+Q ++ S
Sbjct: 543 MAEAKLKIQSLVQS 549
BLAST of Lsi04G021540 vs. TAIR10
Match:
AT5G65820.1 (AT5G65820.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 199.9 bits (507), Expect = 4.5e-51
Identity = 123/436 (28.21%), Postives = 215/436 (49.31%), Query Frame = 1
Query: 107 LEDALDRTGIVPSSSLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAK 166
LE AL+ +G+ L+E V N + + F+WA +P +C S ++ ++ +L+K
Sbjct: 100 LELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSK 159
Query: 167 SREFDSAWSLIIRRLRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISG 226
R+F + W LI + E L+ ++FV+L++R+A A M++ AI + +
Sbjct: 160 MRQFGAVWGLIEEMRK--ENPQLIEPELFVVLVQRFASADMVKKAIEVLD---EMPKFGF 219
Query: 227 TNSEGLFEILLDSLCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHA 286
E +F LLD+LCK G V+ A++ F +M F ++R + LL GW R K+ A
Sbjct: 220 EPDEYVFGCLLDALCKHGSVKDAAKLFE---DMRMRFPVNLRYFTSLLYGWCRVGKMMEA 279
Query: 287 ERLWFEMKKNKISPTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDA 346
+ + +M + P +V Y L+ GY ++ A +L+ +MR G EPNA Y ++ A
Sbjct: 280 KYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQA 339
Query: 347 FGEAGRFKEALGMMERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPT 406
+ R +EA+ + E + TY +L+ G+CK + +L MI +G P+
Sbjct: 340 LCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPS 399
Query: 407 PTTYNYFFRFFSKYGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCN 466
TY + K EE + L KM + Y PD Y++++++ C+ + A ++ N
Sbjct: 400 ELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWN 459
Query: 467 EMKARGFDMDLATSTMLVHLLCKMHKFEEAFAEFEHMIHRGI--VPQYLTFCRLHDEFMK 526
EM+ G + T ++++ L EA F+ M+ RG+ V QY T L + +K
Sbjct: 460 EMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLK 519
Query: 527 RGLTKMASKLQEMMSS 541
+MA + ++S
Sbjct: 520 DKKLEMAKDVWSCITS 527
BLAST of Lsi04G021540 vs. TAIR10
Match:
AT1G71060.1 (AT1G71060.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 197.2 bits (500), Expect = 2.9e-50
Identity = 129/467 (27.62%), Postives = 221/467 (47.32%), Query Frame = 1
Query: 75 AIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSSSLLEAVFNHFDSSP 134
+++ + A+ D I IL+ + + +E L+ + S +L+E V ++
Sbjct: 52 SVETQVSANDASQDAERICKILTKF---TDSKVETLLNEASVKLSPALIEEVLKKLSNAG 111
Query: 135 KFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRRLRGDEVSSLVSVDV 194
S+F WAEN+ GF + + +N LI L K ++F WSL+ + L+S +
Sbjct: 112 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDM----KAKKLLSKET 171
Query: 195 FVILIRRYARAGMLQPAIRTFEFACNLETISGTNSEGLFEILLDSLCKEGHVRVASEYFN 254
F ++ RRYARA ++ AI F +E F +LD+L K +V A + F+
Sbjct: 172 FALISRRYARARKVKEAIGAFH---KMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFD 231
Query: 255 RKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISPTVVTYGTLVEGYCR 314
+ ++ FEP I++Y ILL GW + L + + EMK P VV YG ++ +C+
Sbjct: 232 KMKKKR--FEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCK 291
Query: 315 MRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMMERFMVLEQGPTIST 374
++ E AI +EM +P+ I+ +++ G + +AL ER T
Sbjct: 292 AKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPT 351
Query: 375 YNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKYGKIEEGMNLYNKMI 434
YN+L+ YC ++ + A K + M +G P TY+ + + +E +Y M
Sbjct: 352 YNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM- 411
Query: 435 ESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATSTMLVHLLCKMHKFE 494
P TY ++++M C +ERL++A ++ +EMK +G + + L+ LC +K +
Sbjct: 412 --SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLD 471
Query: 495 EAFAEFEHMIHRGIVPQYLTFCRLH----DEFMKRGLTKMASKLQEM 538
EA F M+ GI P F RL DE K +T + K+ +
Sbjct: 472 EACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMDRL 503
BLAST of Lsi04G021540 vs. NCBI nr
Match:
gi|449437378|ref|XP_004136469.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Cucumis sativus])
HSP 1 Score: 1111.3 bits (2873), Expect = 0.0e+00
Identity = 555/614 (90.39%), Postives = 576/614 (93.81%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MPI KP +L YR+LH+I+HNH S+FR SALQFSSLS HSWLSTPGKPL+KWPSLPDQ N
Sbjct: 1 MPIHKPLILIYRILHSIQHNHPSSFRFSALQFSSLSPHSWLSTPGKPLVKWPSLPDQPAN 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
PL SNSAVISNPN AID+KFEAS+ PNDLSTIS ILSDR VR GAALEDALDRTGIVPSS
Sbjct: 61 PLPSNSAVISNPNSAIDVKFEASYSPNDLSTISSILSDRSVRPGAALEDALDRTGIVPSS 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
SLLEAVF+HFDSSPKFLHSLFLWA K GF S ALFN LINVLAKSREFDSAWSLI R
Sbjct: 121 SLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSEGLFEILLDSL 240
LRG E S LVSV+VFVILIRRYARAGM+QPAIRT+EFACNLETISGT SEGLFEILLDSL
Sbjct: 181 LRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGSEGLFEILLDSL 240
Query: 241 CKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISP 300
CKEGHVRVASEYFNRKREM S FEPSIRAYNIL+NGWFRSRKLKHA+RLWFEMKKNKISP
Sbjct: 241 CKEGHVRVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISP 300
Query: 301 TVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMM 360
TVVTYGTL+EGYCRMR VE AIELVDEMR EGIEPNAI+YNPIVDA GEAGRFKEALGMM
Sbjct: 301 TVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMM 360
Query: 361 ERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKY 420
ERFMVLEQGPTISTYNSL+KGYCKA DLSGASKILK MIGRGFTPTPTTYNYFFRFFSKY
Sbjct: 361 ERFMVLEQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKY 420
Query: 421 GKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATS 480
GKIEE M+LYNKMIESGYAPDKLTYHLLLKMLCEEERLNLA QVCNEMKARGFDMDLATS
Sbjct: 421 GKIEESMSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATS 480
Query: 481 TMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS 540
TML+HLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS
Sbjct: 481 TMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS 540
Query: 541 VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSAN 600
VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSE+AVFSAN
Sbjct: 541 VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSEDAVFSAN 600
Query: 601 RLIDDIKKKANPVT 615
+LIDDIKKKANP T
Sbjct: 601 KLIDDIKKKANPGT 614
BLAST of Lsi04G021540 vs. NCBI nr
Match:
gi|659132770|ref|XP_008466375.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Cucumis melo])
HSP 1 Score: 1104.4 bits (2855), Expect = 0.0e+00
Identity = 557/614 (90.72%), Postives = 571/614 (93.00%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MPI KP LL YR+L+AI+HNH S+FR SALQFSSLSAHSWLS PGKPLIKWPSLPDQ N
Sbjct: 1 MPIHKPSLLIYRILYAIQHNHPSSFRFSALQFSSLSAHSWLSMPGKPLIKWPSLPDQPAN 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
L SNSAVISNPN AIDLKFEAS+ PNDLSTIS ILSDR VR GAALEDALDRTGIVPSS
Sbjct: 61 TLPSNSAVISNPNSAIDLKFEASYAPNDLSTISSILSDRTVRPGAALEDALDRTGIVPSS 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
SLLEAVF+HFDSSPKFLHSLFLWA K GF S ALFN LINVLAKSREFDSAWSLI R
Sbjct: 121 SLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLITSR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSEGLFEILLDSL 240
L G E S LVSV+V VILIRRYARAGMLQPAIRT+EFACNLETISGT SEGLFEILLDSL
Sbjct: 181 LLGGEESFLVSVEVLVILIRRYARAGMLQPAIRTYEFACNLETISGTGSEGLFEILLDSL 240
Query: 241 CKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKISP 300
CKEGHVRVASEYFNRKREM S FEPSIRAYNILLNGWFRSRKLKHA+RLWFEMKKN ISP
Sbjct: 241 CKEGHVRVASEYFNRKREMGSSFEPSIRAYNILLNGWFRSRKLKHAQRLWFEMKKNNISP 300
Query: 301 TVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGMM 360
TVVTYGTL+EGYCRMR VE AIELVDEMR EGIEPNAIIYNPIVDA GEAGRFKEALGMM
Sbjct: 301 TVVTYGTLIEGYCRMRSVEIAIELVDEMRREGIEPNAIIYNPIVDALGEAGRFKEALGMM 360
Query: 361 ERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSKY 420
ERFMVLEQGPTISTYNSLIKGYCKA DLSGASKILK MIGRGFTPTPTTYNYFFRFFSKY
Sbjct: 361 ERFMVLEQGPTISTYNSLIKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKY 420
Query: 421 GKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLATS 480
GKIEE MNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLA QVCNEMKARGFDMDLATS
Sbjct: 421 GKIEESMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATS 480
Query: 481 TMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMSS 540
TML+HLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEF+KRGLTKMASKLQEMMSS
Sbjct: 481 TMLMHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFLKRGLTKMASKLQEMMSS 540
Query: 541 VPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSAN 600
VPHSEKLPDTYNQTPDS+RARRTSIMRKAEAMSEMLKVC DPRELVKRRSPSENAVFSAN
Sbjct: 541 VPHSEKLPDTYNQTPDSVRARRTSIMRKAEAMSEMLKVCNDPRELVKRRSPSENAVFSAN 600
Query: 601 RLIDDIKKKANPVT 615
+LIDDIKKKANP T
Sbjct: 601 KLIDDIKKKANPGT 614
BLAST of Lsi04G021540 vs. NCBI nr
Match:
gi|645226047|ref|XP_008219858.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial [Prunus mume])
HSP 1 Score: 783.5 bits (2022), Expect = 2.7e-223
Identity = 400/612 (65.36%), Postives = 469/612 (76.63%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MP K L + N R +L+F S SWLS G P+IKWPS PD +
Sbjct: 1 MPSHKTLHFLSLALLLFKPNPNPNLRALSLRF--FSDQSWLSVRGNPIIKWPSPPDVPCS 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
N A NPNP I +F ND TI+ +L+D + G++L+ ALDRTGI P
Sbjct: 61 LPHPNPA--PNPNPNIS---GPNFSQNDFFTIANLLADPSISPGSSLQSALDRTGIEPGP 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
LL+AVF+HFDSSPK LH+LFLWA+ +PGF SS LF C+INVLAKSREF+SAWSLI+ R
Sbjct: 121 CLLQAVFDHFDSSPKLLHTLFLWAQKRPGFRSSATLFGCMINVLAKSREFESAWSLILNR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDS 240
+ DE LVSVD FVI+IRRY+RAGM Q AIRTFEFA NL+ + SE LFE+LLDS
Sbjct: 181 IGADEEPGLVSVDTFVIMIRRYSRAGMSQSAIRTFEFASNLDLFLNSESEMSLFEVLLDS 240
Query: 241 LCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKIS 300
CKEG VRVASEYF+ KR++ + PS+R YNILLNGWFRSRKLK AERLW EMK++ +
Sbjct: 241 FCKEGLVRVASEYFDMKRKLHPDWIPSVRVYNILLNGWFRSRKLKWAERLWVEMKRDNVK 300
Query: 301 PTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGM 360
P+VVTYGTLVEGYCRMRR E AIELV EMR EGIEPNAI+YNPI+DA GEAG+FKEALGM
Sbjct: 301 PSVVTYGTLVEGYCRMRRAETAIELVSEMRSEGIEPNAIVYNPIIDALGEAGKFKEALGM 360
Query: 361 MERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSK 420
ME F++LE GPTISTYNSL+KG+CKA DL GASKILK MI RG PTPTTYNYFFR+FSK
Sbjct: 361 MEHFLILESGPTISTYNSLVKGFCKAGDLVGASKILKMMISRGCVPTPTTYNYFFRYFSK 420
Query: 421 YGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLAT 480
+GKIEEGMNLY KMIESGY PD+LT+HLLLKMLC+E RL+LA QV EM++RG DMDLAT
Sbjct: 421 FGKIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCDEGRLDLAVQVSKEMRSRGLDMDLAT 480
Query: 481 STMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 540
STML+HLLC MHKF+EAFAEFE MI RG+VPQYLTF R++DE K+G+T+MA KL MMS
Sbjct: 481 STMLIHLLCNMHKFKEAFAEFEDMIRRGLVPQYLTFQRMNDELRKQGMTEMAHKLCNMMS 540
Query: 541 SVPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSA 600
SVPHS LP+TY + D+ ARR SI+ KAEAMS++LK C DPRELVK RS EN V A
Sbjct: 541 SVPHSTNLPNTYVRERDASHARRKSIILKAEAMSDLLKTCSDPRELVKYRSSPENVVSRA 600
Query: 601 NRLIDDIKKKAN 612
N+L++DIK+KAN
Sbjct: 601 NQLVEDIKRKAN 605
BLAST of Lsi04G021540 vs. NCBI nr
Match:
gi|596127548|ref|XP_007222034.1| (hypothetical protein PRUPE_ppa003040mg [Prunus persica])
HSP 1 Score: 783.5 bits (2022), Expect = 2.7e-223
Identity = 399/612 (65.20%), Postives = 470/612 (76.80%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MP K R L + N R +L+F S SWLS G P+IKWPS PD +
Sbjct: 1 MPSHKTRHFLSLALLLFKPNPNLNLRALSLRF--FSNQSWLSVRGNPIIKWPSPPDIPCS 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
N A NPNP +F ND STI+ +L+D + G++L+ ALDRTGI P
Sbjct: 61 LPHPNPAPNPNPNPN---SSGPNFSQNDFSTIANVLADPSISPGSSLQSALDRTGIEPGP 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
LL+AVF+HFDSSPK LH+LFLWAE +PGF SS LF C+INVLAKSREF+SAWSLI+ R
Sbjct: 121 CLLQAVFDHFDSSPKLLHTLFLWAEKRPGFRSSATLFGCMINVLAKSREFESAWSLILNR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDS 240
+ GDE LVSVD FVI+IRRY+RAGM Q AIRTFEFA NL++ + SE LFE+LLDS
Sbjct: 181 IGGDEEPGLVSVDTFVIMIRRYSRAGMSQSAIRTFEFASNLDSFLNSESEMSLFEVLLDS 240
Query: 241 LCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKIS 300
LCKEG VRVASEYF+ KR++ + PS+R YNILLNGWFRSRKLK AERLW EMK++ +
Sbjct: 241 LCKEGLVRVASEYFDMKRKLHPDWIPSVRVYNILLNGWFRSRKLKRAERLWAEMKRDNVK 300
Query: 301 PTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGM 360
P+VVTYGTL+EGYCRMRR E AIELV EMR EGIEPNAI+YN I+DA GEAG+FKEALGM
Sbjct: 301 PSVVTYGTLIEGYCRMRRAEIAIELVSEMRSEGIEPNAIVYNAIIDALGEAGKFKEALGM 360
Query: 361 MERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSK 420
ME F+VLE GPTISTYNSL KG+CKA DL GASKILK MI +G PTPTTYNYFFR+FSK
Sbjct: 361 MEHFLVLESGPTISTYNSLAKGFCKAGDLVGASKILKMMISKGCVPTPTTYNYFFRYFSK 420
Query: 421 YGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLAT 480
+GKIEEGMNLY KMIESGY PD+LT+HLLLKMLC+E RL LA QV EM++RG DMDLAT
Sbjct: 421 FGKIEEGMNLYTKMIESGYTPDRLTFHLLLKMLCDEGRLGLAVQVSKEMRSRGLDMDLAT 480
Query: 481 STMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 540
STML+HLLC +HKF+EAFAEFE MI RG+VPQYLTF R++ E K+G+T+MA K+ MMS
Sbjct: 481 STMLIHLLCNVHKFKEAFAEFEDMIRRGLVPQYLTFQRMNVELRKQGMTEMAHKMCNMMS 540
Query: 541 SVPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSA 600
SVPHS LP+TY + D+ ARR SI++KAEAMS++LK C DPRELVK RS EN V A
Sbjct: 541 SVPHSTNLPNTYVRERDASHARRKSIIQKAEAMSDLLKTCSDPRELVKYRSLPENVVSRA 600
Query: 601 NRLIDDIKKKAN 612
N+L++DIK+KAN
Sbjct: 601 NQLVEDIKRKAN 607
BLAST of Lsi04G021540 vs. NCBI nr
Match:
gi|694395195|ref|XP_009372943.1| (PREDICTED: pentatricopeptide repeat-containing protein At5g11310, mitochondrial-like [Pyrus x bretschneideri])
HSP 1 Score: 775.0 bits (2000), Expect = 9.7e-221
Identity = 398/612 (65.03%), Postives = 467/612 (76.31%), Query Frame = 1
Query: 1 MPIQKPRLLFYRVLHAIEHNHRSTFRVSALQFSSLSAHSWLSTPGKPLIKWPSLPDQSGN 60
MP PR F L + N + +F S SWLS G P+IKWPSLPD +
Sbjct: 1 MPSYNPRQFFSLTLFLFKPNPNLHLPSRSRRF--FSNQSWLSVRGNPIIKWPSLPDVPCS 60
Query: 61 PLQSNSAVISNPNPAIDLKFEASFEPNDLSTISGILSDRGVRSGAALEDALDRTGIVPSS 120
N + +N NP+ SF P D S I+ +L+D + G++LE ALDRTGI P
Sbjct: 61 LPHPNPSPNTNHNPSSG----PSFSPMDFSIIANLLTDPTISPGSSLESALDRTGIEPGP 120
Query: 121 SLLEAVFNHFDSSPKFLHSLFLWAENKPGFCSSKALFNCLINVLAKSREFDSAWSLIIRR 180
L++AVF+HFDSSPK LH+LFLWAE +PGF SS LF +INVLAKSREFDSAWSLI+ R
Sbjct: 121 GLVQAVFDHFDSSPKLLHTLFLWAEKQPGFRSSAKLFGSMINVLAKSREFDSAWSLILNR 180
Query: 181 LRGDEVSSLVSVDVFVILIRRYARAGMLQPAIRTFEFACNLETISGTNSE-GLFEILLDS 240
+ GDE LVS D FVI+IRRY RAGM + AIRTFEFA NL++ + +E LFE+LLDS
Sbjct: 181 VGGDEGPGLVSADTFVIMIRRYTRAGMPESAIRTFEFASNLDSFLNSEAEMSLFEVLLDS 240
Query: 241 LCKEGHVRVASEYFNRKREMDSCFEPSIRAYNILLNGWFRSRKLKHAERLWFEMKKNKIS 300
L KEG VRVASEYF+RKR++ + PS+R YNILLNGWFRSRKLK AERLW EM++ +
Sbjct: 241 LSKEGLVRVASEYFDRKRKLHPNWIPSVRVYNILLNGWFRSRKLKQAERLWVEMRRENVK 300
Query: 301 PTVVTYGTLVEGYCRMRRVERAIELVDEMRGEGIEPNAIIYNPIVDAFGEAGRFKEALGM 360
P+VVTYGTLVEGYCRMRR E AIELV EMR EG+EPNAI+YNPI+DA GEAGR KEALGM
Sbjct: 301 PSVVTYGTLVEGYCRMRRAEIAIELVSEMRREGVEPNAIVYNPIIDALGEAGRLKEALGM 360
Query: 361 MERFMVLEQGPTISTYNSLIKGYCKARDLSGASKILKSMIGRGFTPTPTTYNYFFRFFSK 420
MERF+VLE GPTISTYNSL+KGYCKA DL GASKILK+MI RG PTPTTYNYFFR+FSK
Sbjct: 361 MERFLVLESGPTISTYNSLVKGYCKAGDLVGASKILKTMISRGTAPTPTTYNYFFRYFSK 420
Query: 421 YGKIEEGMNLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAAQVCNEMKARGFDMDLAT 480
+GKIEEGMNLY KMIESGY PD+LT+ LLLKMLCEEERL+LA QV EM++RG DMDLAT
Sbjct: 421 HGKIEEGMNLYTKMIESGYTPDRLTFQLLLKMLCEEERLDLAIQVSKEMRSRGLDMDLAT 480
Query: 481 STMLVHLLCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 540
STML+HLLC MHK +EAF EFE MI RG+VPQY+TF R+ D K+G+ +MA KL +MMS
Sbjct: 481 STMLIHLLCNMHKLKEAFEEFEDMIRRGLVPQYITFQRMDDVLRKQGMNQMARKLCKMMS 540
Query: 541 SVPHSEKLPDTYNQTPDSIRARRTSIMRKAEAMSEMLKVCKDPRELVKRRSPSENAVFSA 600
SVPHS LPDTY + D+ RARR SI++KAEAMS++LK C DPRELVK R EN V A
Sbjct: 541 SVPHSTNLPDTYVRDADASRARRKSIVQKAEAMSDLLKTCSDPRELVKFRRSPENLVSIA 600
Query: 601 NRLIDDIKKKAN 612
N+LI+DIK+KAN
Sbjct: 601 NQLIEDIKRKAN 606
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PP375_ARATH | 1.2e-173 | 53.15 | Pentatricopeptide repeat-containing protein At5g11310, mitochondrial OS=Arabidop... | [more] |
PP150_ARATH | 2.0e-53 | 30.70 | Pentatricopeptide repeat-containing protein At2g13420, mitochondrial OS=Arabidop... | [more] |
PP129_ARATH | 1.6e-50 | 29.59 | Pentatricopeptide repeat-containing protein At1g77360, mitochondrial OS=Arabidop... | [more] |
PP248_ARATH | 8.1e-50 | 28.34 | Pentatricopeptide repeat-containing protein At3g22670, mitochondrial OS=Arabidop... | [more] |
PP447_ARATH | 8.1e-50 | 28.21 | Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0LEE0_CUCSA | 0.0e+00 | 90.39 | Uncharacterized protein OS=Cucumis sativus GN=Csa_3G878910 PE=4 SV=1 | [more] |
M5XNZ3_PRUPE | 1.9e-223 | 65.20 | Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003040mg PE=4 SV=1 | [more] |
W9SQG5_9ROSA | 7.7e-217 | 66.78 | Uncharacterized protein OS=Morus notabilis GN=L484_007369 PE=4 SV=1 | [more] |
B9H9Q3_POPTR | 4.2e-215 | 66.49 | Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s26360g PE=4 SV=1 | [more] |
A0A061GPP0_THECC | 1.8e-210 | 66.55 | Pentatricopeptide repeat superfamily protein isoform 2 (Fragment) OS=Theobroma c... | [more] |
Match Name | E-value | Identity | Description | |
AT5G11310.1 | 6.5e-175 | 53.15 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G77360.1 | 9.2e-52 | 29.59 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G22670.1 | 4.5e-51 | 28.34 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G65820.1 | 4.5e-51 | 28.21 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G71060.1 | 2.9e-50 | 27.62 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |