Lsi04G020790 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G020790
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 27966282 .. 27973235 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGTGGTTCATTGTTTAATCTTAAAGATGTGAGTGCACTCAAGCTGAATCATTAGATGGATGATTCTCTTTTAAGCTGCAATCTATAGTGCATGACATCCTAAACCTCTCACGGTACACTAACTGGCAATTTCTATATTTGTTTGAATGAAAGAATTAGAGAACTTGCAAGTGAGAAAATAATTTTTATTTGAATGATAGAATTGTCGAGCTCATTTGATAACAGTGTGGCTGCAATACTTCTCCAAGTGTTATTCCAGAGACTTTGAACTTCAAATTGACAGGTATCAAGTGGAAACTTATTCTAATAGAATCTTGGTTTGAAATGGTTCTCATGTTTTCTTTTGACACTTGACACTGTTGCATTTGTGTGGAAGAGGTGATATTATTCTGTCATATATGGTCATTGGCCCATTGTAACATTTTCATATGATTTTTTTAGGCCATTTATTTCATGTCTGTCGAAGAAGGTGCAAGTCAAGTTTGTGGAAAAAGTGCGAGTGATCTCTCTTGTGATGCATAATTCCTTTTCAACCTTGATTTTGTATGTGTATTTTGTAATGATAACTGTTGAATTTCTTTTCCATCTATATTTTACAGGTTAGCCTCCTAATGATATTATTACTGGTAAGATATTGGACTGTGAAATGTGATGTACTCTTGCTGAAGAGATGATCTTATCTGCACTGAAAAGTGAAATTTGGCATTGGTTAAGTCAAAATCTTTGTTTAACAAAGTTGCTATGTGGAAAAGATCAACTGGTTTGCAGAATAGATGGTAAGTGAGAACCAAGTGTTTCTCTTTTGGCATTATAGAAAAACGAGATATAATTTTACAGTTATATATGCATGGTTTTTGTTTTGATTTCTTAAATACATGCACATTTTTTTTCTCTTTAAATTCCGAAATAACATTTCTGTATCAACAACACTAGGCTTTGGGATCGGATTTCCTTGTCCTTTACTGTCTAGCCAGAAGTTCTCAATTTCTAGAAATAGACATCCCCCTGTTGATATTATTACCTGTTTCAAGCACAACAGGGGAGTAGTTGAGCTCTATTCCTACCTTTTCTGAGAGCCCTCATGTCTTTAAATATATCTTTTTACTCTTTAGACAAGAGGAGAAACGACACCTTCATGTTGTACCATTGCTCAAGGGAACTTCAATTAATTCATCAAATCCTAATTTCTTCGTGCTTCCCTTCCTTCTCCTCCCATTAAAATTTTCAAAAGCCTACCTTGTTGCATGGAATGTCTTTTGCAAAACACCAAGAAGCAAGAGCCATCTCAATAGCCATAGAGGAAAGGTATTTTCTTTCTTTATGTCCCACAATACCATAAATGTTGGTCCTTCGTTTAAAACCGGTATTTTTGTTAATGGATGTAATTACTATCACCTAATCATCAATGGCGACCTTGTTTTGGAGAGAACAATTTTTTGCTCCCAATTAATACCAGAAGATCCCATCATCTTGTGTGGGCAAAACAATTTCGGACTTCAAAAATAAATACATAATTTAGGACTTCAAATGAGGGACCATCATTTCACATTAAGGTTAATCAACTGTCTCTGCAACTTGTTAGCAGTGGCATTTAGTGCAAGAGAGCTGATTGACAAGAGAATGTACCTAGGTTATAAAATATCCTGACAAAATAGTCGATATTTCGATTAAGGGTCACACATTCGACTTTCATAGTGAAGTAAGATACATATTTGACAAGTACTTGGGGGGAAAAAAAAGAAAAAGAAAAAGAAAAAGAGAGGAAGAGATTGCGGTCAGACTTAGACAATGCTTATGTTATTGTTGACTTTCTTTAGATTTCATTGAGAGGGCTCTAGAACTGAATTACTCAAATAAATCTGTGACTATGGTCTATGAACATGGTTGTGTTTTCTCTTGAAATGATTTGTCCTCTAATTTATTTGTTGAGGAAATTTTACAGGAAGAAGTGTTGTGTGTGCTACGTTTATGAACAATGGTTAACGCAAAGGAACTGAAAGCAAAATCCTTAGGAGGGAAAGAAGATGAGTGCACCGAAAGTTGTCAACATTGTCAAATGAAGGTGGAAGAGAAGGTAAACGTTCATTTCTCTCTTTAGTTATTTTATATATTTTTATAAAGTTTCACATGTTGATTTCAGAAATGAAAAGTATCATAAGTTGAATCTTGATCAAGTAACTTGGCTGGCTTTTCTGCTTTTGATGGGAATCATACGAGTAATTGTTATTAATTGGAACTTGGTGAATTAGGGTGACTTTTGGTGCTATAAATAGTACCACTTTTTTAGCACGTCTAAGAAATTGCAGATGTAATCAAATGTAATTATGAGATTTTAAAAAATATTTAAAGCCCAAGTGCTTTCAATGGATTGACTTAATTAAGAAGCTCTCCCTCTAAAGATACTACATAAAAGTAATTATCACGCTCACTCTTAGGTATGAGGTATGTTGTGAGTACCATAAAAGTGTCTTTTGAAAAAAGTCACGAGCACTTTAAAGTGCTCAAGGATTTAGAGTATTTGCTTGAGTTGACTAGATATTTTAGACGACTTTTAAAAGTATGAAATATTAAGTTATTTTATAGTCTAAAAGGTGTCTAGAATTAAAATATGGTGGTAGATTGAACAATGTTTGTTAAAATGAGCATAATTCAACCACTAATATATTCCTCTTTTGAAGTAAGAGGTTCAAATCTTCTCACCTAACTCTCCATAATTGTATTAAAAATTTGAACAGCCTTTGAAAGGAAAAGGGGTATAGCTTGAATGAAGCTACATTATTTGGGCTTAGCCCACGAAAATATTGTCCAAAGGAGAGTAAAGAAATGGTTCTGTGATTGGAAGGAAGGAAAGGTCAGTCGTTAATAAATTATTAATTATTGATTAGTATTTCTTTAATAGATATTTTGGTCGGGATTCGTTGACTTTGAATGTTTGTACTAAATTGACATTTGAAATGCCCCCACGATTTGCTAAAGAAATAGCACAACAACTATTGCTTTTAGTGATGGTGGTTTCTTTAGAATTTGGTGTCCTTGTTGCTCCACTAAACAATGTGACCATTTATTTCTTTGGCATTAAAAAGGTTTTAGTTGGATGGTTAGTGTAACTTATCTGATCATTATTTTCCTTATTTTTATTTTTGTTGTCAAAGTTTGAGTGACTAGAAATCCTTTGTTCTACATCTTTTTCAAACATATGGCCCCCCAAAATTTTGGTGGTCCAGTTTTGATTTTACAATTTTGATAATAAGATGTGAGGGGCATGCTCATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAAAAAAAAAAAAATATATCTATAATACTAACCTCTAGTTAGAGGAACATACAATTTTCCTATTAAAGTGTGATTATGGTTTTGGAAAGGGTGAATGAAGTTTAGATTTAATAATAAAAAGCAACCACCATTCAATGAAGATGCAATAATCCATTTTGCCTCTACCAAAAGGGTTATAAATAAGATGTGGAAAGCAGCTTTAATACTTAAAATAGGACACCCCACAATCCTTAGTGCTACAAATTCTTTGCTCCCCACTTGAATTCAAAGTTCAAAGTACTTGTTTGGAGACCATGTGGTTGTCATTGTGCCTTTCATTTTAAGATTCCCACATCATTCTCATCACTACTTCCTTATTTTCCTTTTGCACCACTAAAAAAAAAACCCAACTTTTCCATTAATATTTTGGTTTTGTATACTTTCATTCATTTGTTTTCTATGCTTTTATAAATGTATTAACTTAAACTTTGCTTGATTATATCGTAACTATAGCTGACATGACAGTGTTAATATCAAAATTGGTGCTATTCTTAATTTGTTTATTTACTGCTATTAAACTAGATGATTGATGTCATTATATAGTTAGAACAAACTGTACAAAGAAACTAGGGGTGTTTGTGGAGGAGTGATGCATCTTATCTAGCCCAAAGAATTCTTAATTAAATTCACATATTAACATCAATTTCATGGTTTATTAATTTCAAATACTTTGAACCCTATGACTATACAAGTATATTCTTTTTCTCAAACACCCTTAGAGAGCTTTGTCCATTGTTTCAAAAATTGCAACATTATCACTGATCCTTTCATAAATGTGTTAAAATCACCTTTGCAACAAAAATAAGTTTTAGGCGAAAAATCGATGTGACGATGACGTGGCAACAATGACTAAGCACTTGCTTGAATTACGTTTGAAAGGATGACATTCATATATATTTCAATGATTTTTCTACTAAAATATTTATGAAAGATGAACGATAATATTGACTAGTTTAATGGTATGTAATAATATAGGTTTTCCTTGAAGCAAATGGAACTTTTATAAATGGTTTATTTTGCAGGAGTTGACAGGTTTGGTCAAAGGTTGGTGCTAGGTGCAAGTTGATGTCACACACCATTATGAGAGAGAAAGATGAGGGTTTGGGAAGAAGGTAAAAAAGTGGTTGCTCTGATTGATTGATTAAAACCCTTTTTTGGAGTTTGGCACTGTACTTTTTTGGGCTGTGAAATAAGATCTATGGGCATATATATATATATATATATCATCACACCATCATGCATGTACAATTTACTATACATTGTACATTTTTGTTTTCCCATCTCCATCAGGGCATAAGATTGACCACTCCTATCATGTGAAATCTATATGCATTTTTTTCACTACTTTTTCCTCGATATTTTATTGATATATTTGTAAATTTGAAATCTTATTATAGATATTTGACATCGAAAAATATTTTAAGTGCATCTTAGGCAGTACTTGTTTTTGTACATCTCATCGAATTGTACAGTCATAATTTGTTATATAGGTTTTTTTTTTACTTCCTTTTTTAGATATTTTAAATCATTTTTTTTTGTGTGATAAGAGTGAGATGCATAAAAATGAGTGCATCTAAATATTGCTCTTTAACATCGATGATTTAATCTTTTGATTATAGCATAATACTTAGTGAATTACACAAATTTAGAGAAAGAAAAAGAGAAGAAATTATTAATTCCTTCATTGAATTTTTAAGAAATTAGTAGAAATTTGAATTTTTTTAGATGACATGTTTTTTTTTCCCTCTAAATTTCTACACATTCACTTAGTACTGTGCTACGTAAATATTGCCAACCGGTTTTTACATTTATTAATAGTGATGGGATAAACTGAAAAATGTTCCTACGTAATACTGACAGTCTAAATTGATTTTTTTTTTAATAATAAGAATTGAATTAGAAAAAAAAATACTCAGGATTAAAACATATATTTATGAGATGTATTCAAATATATAGAAAAATGAGTCAAGCTATTTATAAGTATAAATTTTTTTTATTATCTATCAGCGATAGAATTTTATCGTTTGAGCGACAGAAGTCTATCGCTTGAATGCTATCGCAGATAGATAGTAAATTTTTTTATATTTGGTGTTTAATCCTTTTTGAAGTGTATTTGAAGCTTTTTGCTTATCAAGTACTTGGATTAAAAAAACACTTTTTATTTTATTTTTATGTGCTTTTGACTTCCAATCGTATTTTTACATTTTTTTTTCAAATATGACCACTTTGATAGAAATGTGTTATTAGTCGTATCTAAAATCACTCAAAATAGGTCAAAACGAGCATAACTCAATTAACATACGAGTGTTAATAATTACGAAATTTGTGGTTCGAATCATCTATCTCTAATTACACTAACTCCAAACATAATCTAATTAGTTGATTAAATATATTATTTGTCAAAGAAAAAGTGATTATTTCACAATTCTCCTTTGAATGGATGTTATGTTATATTATTCCATTTCTTTTCTTTAAGGTTGTATGTGGGTGGAGCCATTTGGACCATAA

mRNA sequence

ATGGATGTGAATTGTCGAGCTCATTTGATAACAGTGTGGCTGCAATACTTCTCCAAGTGTTATTCCAGAGACTTTGAACTTCAAATTGACAGACAAGAGGAGAAACGACACCTTCATGTTGTACCATTGCTCAAGGGAACTTCAATTAATTCATCAAATCCTAATTTCTTCGTGCTTCCCTTCCTTCTCCTCCCATTAAAATTTTCAAAAGCCTACCTTGTTGCATGGAATGTCTTTTGCAAAACACCAAGAAGCAAGAGCCATCTCAATAGCCATAGAGGAAAGGTATTTTCTTTCTTTATGTCCCACAATACCATAAATGTTGGTCCTTCGTTTAAAACCGGACTTCAAATGAGGGACCATCATTTCACATTAAGGTTAATCAACTGTCTCTGCAACTTGTTAGCAGTGGCATTTAGTGCAAGAGAGCTGATTGACAAGAGAATGTACCTAGTTTCACATGTTGATTTCAGAAATGAAAAGTATCATAAGTTGAATCTTGATCAAGTAACTTGGCTGGCTTTTCTGCTTTTGATGGGAATCATACGATATTTCTTTAATAGATATTTTGGTCGGGATTCGTTGACTTTGAATGTTTGTACTAAATTGACATTTGAAATGCCCCCACGATTTGCTAAAGAAATAGCACAACAACTATTGCTTTTAGTGATGGTGGTTTCTTTAGAATTTGGTGTCCTTGTTGCTCCACTAAACAATGTGACCATTTATTTCTTTGGCATTAAAAAGGAGTTGACAGGTTTGGTCAAAGGTTGTATGTGGGTGGAGCCATTTGGACCATAA

Coding sequence (CDS)

ATGGATGTGAATTGTCGAGCTCATTTGATAACAGTGTGGCTGCAATACTTCTCCAAGTGTTATTCCAGAGACTTTGAACTTCAAATTGACAGACAAGAGGAGAAACGACACCTTCATGTTGTACCATTGCTCAAGGGAACTTCAATTAATTCATCAAATCCTAATTTCTTCGTGCTTCCCTTCCTTCTCCTCCCATTAAAATTTTCAAAAGCCTACCTTGTTGCATGGAATGTCTTTTGCAAAACACCAAGAAGCAAGAGCCATCTCAATAGCCATAGAGGAAAGGTATTTTCTTTCTTTATGTCCCACAATACCATAAATGTTGGTCCTTCGTTTAAAACCGGACTTCAAATGAGGGACCATCATTTCACATTAAGGTTAATCAACTGTCTCTGCAACTTGTTAGCAGTGGCATTTAGTGCAAGAGAGCTGATTGACAAGAGAATGTACCTAGTTTCACATGTTGATTTCAGAAATGAAAAGTATCATAAGTTGAATCTTGATCAAGTAACTTGGCTGGCTTTTCTGCTTTTGATGGGAATCATACGATATTTCTTTAATAGATATTTTGGTCGGGATTCGTTGACTTTGAATGTTTGTACTAAATTGACATTTGAAATGCCCCCACGATTTGCTAAAGAAATAGCACAACAACTATTGCTTTTAGTGATGGTGGTTTCTTTAGAATTTGGTGTCCTTGTTGCTCCACTAAACAATGTGACCATTTATTTCTTTGGCATTAAAAAGGAGTTGACAGGTTTGGTCAAAGGTTGTATGTGGGTGGAGCCATTTGGACCATAA

Protein sequence

MDVNCRAHLITVWLQYFSKCYSRDFELQIDRQEEKRHLHVVPLLKGTSINSSNPNFFVLPFLLLPLKFSKAYLVAWNVFCKTPRSKSHLNSHRGKVFSFFMSHNTINVGPSFKTGLQMRDHHFTLRLINCLCNLLAVAFSARELIDKRMYLVSHVDFRNEKYHKLNLDQVTWLAFLLLMGIIRYFFNRYFGRDSLTLNVCTKLTFEMPPRFAKEIAQQLLLLVMVVSLEFGVLVAPLNNVTIYFFGIKKELTGLVKGCMWVEPFGP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G020790.1Lsi04G020790.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G020790Silver-seed gourdcarlsiB126
Lsi04G020790Silver-seed gourdcarlsiB179
Lsi04G020790Silver-seed gourdcarlsiB575
Lsi04G020790Cucumber (Chinese Long) v3cuclsiB135
Lsi04G020790Cucumber (Chinese Long) v3cuclsiB306
Lsi04G020790Watermelon (97103) v2lsiwmbB285
Lsi04G020790Watermelon (97103) v2lsiwmbB306
Lsi04G020790Wax gourdlsiwgoB364
Lsi04G020790Wax gourdlsiwgoB405
Lsi04G020790Bottle gourd (USVL1VR-Ls)lsilsiB151
Lsi04G020790Cucumber (Gy14) v1cgylsiB264
Lsi04G020790Cucumber (Gy14) v1cgylsiB437
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB022
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB059
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB120
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB177
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB436
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB439
Lsi04G020790Cucurbita maxima (Rimu)cmalsiB727
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB010
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB045
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB109
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB164
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB425
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB428
Lsi04G020790Cucurbita moschata (Rifu)cmolsiB719
Lsi04G020790Cucurbita pepo (Zucchini)cpelsiB297
Lsi04G020790Cucurbita pepo (Zucchini)cpelsiB459
Lsi04G020790Cucurbita pepo (Zucchini)cpelsiB551
Lsi04G020790Cucurbita pepo (Zucchini)cpelsiB636
Lsi04G020790Cucurbita pepo (Zucchini)cpelsiB677
Lsi04G020790Wild cucumber (PI 183967)cpilsiB119
Lsi04G020790Wild cucumber (PI 183967)cpilsiB285
Lsi04G020790Cucumber (Chinese Long) v2culsiB122
Lsi04G020790Cucumber (Chinese Long) v2culsiB285
Lsi04G020790Melon (DHL92) v3.5.1lsimeB298
Lsi04G020790Melon (DHL92) v3.5.1lsimeB325
Lsi04G020790Watermelon (Charleston Gray)lsiwcgB284
Lsi04G020790Watermelon (Charleston Gray)lsiwcgB306
Lsi04G020790Watermelon (97103) v1lsiwmB294
Lsi04G020790Watermelon (97103) v1lsiwmB313
Lsi04G020790Cucumber (Gy14) v2cgyblsiB051
Lsi04G020790Cucumber (Gy14) v2cgyblsiB109
Lsi04G020790Cucumber (Gy14) v2cgyblsiB265
Lsi04G020790Melon (DHL92) v3.6.1lsimedB311
Lsi04G020790Melon (DHL92) v3.6.1lsimedB341