Lsi04G020780 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G020780
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 27953561 .. 27958178 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTCACATCTTCGAGTTGTAAATCCAATTTTTAGGTAATTTGTTTAATCTCAAAGTGGAAACCTAAATCCAGGTCTTTTTTGCTCATTGGAATTCTCTAGAAGAAGAAAATAAAAAAATAAAATAAAATAAGTCCCCCCTTTAATTTATTTTTTTATTGCCATTAATTATTATTGTTTCATTAATTGAATAATGTGTGTGATTCAATTGTAGATTTGACAGATAAGTTTGTGTTGTTTCTTCTTCCTTGATTCTTTTTTGGCTGATCTAGAACAGAAATTAATGGAGGAGGATCTACAAAAGAAAAGCATAACATTTGTCATTTATGCAGCTAATTATTTTTTATCAACAAGGAAACTGGTAAATTTTTTTAATTTTTATTTTTATTTAACTAATTTTGTTTGAAGATCTTGTGTCCTTCATTTTAAGACAGCCGTACGTCAAATGCAGTGACAAAAGTTAATATATTATTGCAATTTATTTTCTATTTACTTAATTTTGAAGTTCAATTATATATATAAAACTTTTGGTTTAAAATTTTGGTGTTGATACTTTAAACTTAAAGCAATATTGGCCAAGGAACAACAACATAAGTTAATTAGATATTGCCTTTCTTTGTTTAATTGTTTCTTGTTGTTTCATTGGTTCACTTAAATTCATTCCTTGTTTATCACTGTCATTTTACTTTCATATATCAAAAAATTAGAGAGATAACTTTCAAGAGCTCGAAGAACCATATGTTATCTAATACTATAGATTATGGACTTGTTTAGATTGACTTTTAAAGTGTTTAAAAACTCTTTTTTGCATTTAAAAAATCAATCCAAACATACTCTGATTAGGACAATTACTTAAGGAACATATATCGAGAAATGTAGTTATGAGAGAATCGCCTTTGTGGTATAAACTACGCTTAGTTTCCATCTCTGAGCTCAAATGTGAACGATTTTTTTTTTTAGTTCAATAAATATCTAGCAAGTGATTAAATATTCAACTTTATCGATTCATATAAATGTACTTTTTAACATAAATTAGGTGATTTTTCATTTTAATAATGTTTAAGATAAAATGTCACTTTATTGCAATACAATTAATTTGTTGCAGCTTTTACATTGAATTCATATGTTTGCCTTAATAATATTTGATTGGTGATATCACTTTCAAGATGTTTTTTAGTTCCATTTACTCAAAATTCAGTGCTTTTATGGTCTTATATATATTGTTTAAGTGATTCTCAAAGCTTCATTCTTAGCCTTTTTTACCACTTAATCTTTGAATGGGAAATCCTTCAAAGATTACTTCTTTAAGTATTAAACATTTCTTGAGCTATTGAGATTTAACAATTTGTTCATTTCATAATTTTCTATCACAAGGAAAATCAATAATAGAAAGAAGATCTTGTGTAAAAGTTGGTTCTTTCAATAATGGTTAATGATTTTGTAACTATGTTGTTTATTGCAAGATGCTAATTTTTCTAATGTATATGTAATTAAATTGACATATGATACTAAACATCTATTTATATGGTAATATATTACACTTGTTTGTGTTCCTTTCAAGAAGTGTCAATATATTGATATTTCCTAAATTTTGTTTCTTGATGTGTCAACTATATTTTCGATATATCTTCAATGCGTATATCTCGAATTATGAATGCATATTAGCTTATTAGTCAATTTATATGTTAATGAAAAAAATCATTCTTTATTTATTACTTTTATCATCCTTTCCTTTTGCATTCAATAATATTGTGTTGTATCTTTATGTGATCAAATGGAGAAATTGGGGGATTTTTCAAAATGACTCATGGTTTTATTTGTTGGCCTTCAAAGGAAGTGATTGAAGAGCTAAAATCACTCTTGAATTTGAATCCCCATTGGAAGATAAATATACTAGTTCATTCAATTATAATTATATTGCATATGTAACTTATCAGAAGAAGGTTAATGTTCTAGTAATTTATCAATTTGAGTATAGTTTAATTGAACAATAAATATATTTTCGACAAATAAGTCAAAAACTTAAATCTCCCACATCGACATGTTGTATGCAAATAAGAAAAAATAGTAATACACTTTAATTATTTGGCTTGTTACAGCTTACAAAGAGGTTGTGAGCTGCCAACTACAAAACAATAGAAAAAATAGTAATACACTTTAATTATTTGGCTTGTTACAGCTTACAAAGAGGTTGTGAGCTGCCAACTACAAAACAATTTATTGATCTAACAGCATATCTCTGATTACTTTTTCTTGATCCAGACTTATCATATATGCTAAATGAGCAAAGGGCAAAAATGTTTCCATCCTCGAGTAATGGATGGAGCTTGATCGGCTCGAAGCCCAGAGAGGCTGATATCGAAGGAGACAGGCGGTAGAATCATTCGATGAAAACACATTTGACGAGTAAAAATTTTGACGGGTTTGACGATCAAATATCTGCTCTACTAATGCAGGGCATTGGGTTGAGCATTCATTTACAAAAAGCTTGACTTCAGGTAGGAAAATGTTGTAGGCTGATGCTGCCAATGGGTTTAGGTTGAAACTCTACTCTTTAACTTCAAAAGGAATAAGGATTATTGGTTTTTGGACTTCCACACTCTGAGATATTTAGCAGTTGGTAGGCTTGGTAATGCAATTTGAACATACATTGCTGTAATTCACATACTTTATTTAGGCTTGTTGGCATATATTTTGAAAGGAATAGAAGTTCTCTACTTTGAGATACAGTTGCTGTGAATTTTGTAATGATCCCAAAATGAAACAATTGCAACAACAACCCATAGTAGATCAGTTCTCATCTAAGAACAACAATATAGATATAGATATAGATATAGATTTTCTTCATACAACTGCTTGACTGTTGGTTGAATAAATGGTATGCTACAACCTGCCAAGGAGGTTGAACCAAGAAGACGATGGAAGAACATGTAACCTCGTATTAGTATTGGTTCATGCTAAACTAATCAAACATTAGAAAAATCAATAATCAAAAGAAAATACTTAGATGTATCCCAGGTTGCACCTATGTTTGTGCATCCTATCAAATTGTCCAATCATGTTTGCTACGTGTCATATTCATTTTGTATGCATGATGCTGTGAAATGCATAAAAATGAGTGCATCTTAGAATATACCTAAATATTATTCACATCAAATAATTTGCCGAGGCAAGCTAAGCTATTAAGCTCCATGTTAGAGCCAAAGCTTAAAGAAGTGGAGGAGAAAAGTACTCCAGCTTTATACTTTATTCTTCTGAGCTTTAGCACTAAATGTGAACTGCCATCTCCAACCCTAATAAACAGTTAACATGAGAATCATTTCTTAGTTTGCCTCTATCAAGTCAGAGTCTACTGTTCTTGATGAGCTTCCATGTATATATTTTTCTTTCTTTTCATGAAATGCAAATGAATAAGACTGAAGAAACATAGTACAATTTGAAACTGAAATGGCAGAAATAAAAAAGATGACTTTAATTCAGGTATAATAGTATACTACCTTTATCAGCCTGTTCACTGCCCTGAGTAACAGTGAAAGTTTGGCATTTTCTTATCTGTACTTTTTTTTTCTGTCTTTTTTTTCTTATGCACTTGTTTTTTTTTTCCCCTTTCAAATACTCAATTGCACAAACAGTCCATATCCTTTTACACTTTTCCTATTCTCAAACTTCTTTTTTGCTGCAAATTTTCTCATCTTTATTTTTATTTACAATACAATCATTTGAGGGGTGAGATAAGCCCTGCAAGTACTTGTCATTTCACTTCAAAATTTCCAATGAACAGAATAATTCTTGCATGGATAAGATAACGTCAAGACTTCCTTTTGCACAAAAAGTTTGGCTGGAAATGATACACTAATTAAATAGGCCATTAATCGAACATTACAAAGAGATTTTATCAGGACAATTATATTAAACAAGGATTACAAAAGATTACAAGAGTGTTAAGCAGTTGCACTTTTTGAGAGCGCCCCAGCTGCAAATAAGAGGTTCCTCCGAGAGAACTGAATCAGAAAGAAAATAAAACCATTTAGAGAAATGTTATGTGAAGAAATAAGTTTAAAAATAAACAAGTTCGGTCCATCTGTACCCGCAAACTGTAAACCGGAGTCGACTTGGTTGGTAGAGTCTTCAAGGATCTAAGTCTATTGGCAGTTCCACTTTTGCTGATAATGAGAACAGAAACGTTCAATATGCAAAGGTCAAATTTTGAGCTAAAACATCTTAAAGTACTTTAGGGAGAACTCACTTTTCATCTGCTCTTGGTGGCTTTGTGCTTGAAGTTACGTCCCATAATTTCACTGTGCAATCGGCAGAGCCAGAGGCAAGGAGAGAGCCCTCACAACTGAAATGGAAAACAACAAATATTGGAGGATTATTTACGTCAATATCTAAACCCAAAAGCAGGCAGGGATGTGGGGAGGGGTGAGGTGGGGTCGAAGTTCTCTTTTTATGCACCTGAAGGCAAGGGTCCAAACGCATGATGTATGTCCAATCAAAGGTGTAACACAGCGACCCGTCGATAGGTCCCACATCATAATCGTACCGTCTTCGTCACCAGATGCCATGAACCGACCATCAGGTGACATTGCCAACGACAGAATCATGCTCCTGTGA

mRNA sequence

ATGGATCTTGTGTCCTTCATTTTAAGACAGCCGTACGTCAAATGCAGTGACAAAAACTTATCATATATGCTAAATGAGCAAAGGGCAAAAATGTTTCCATCCTCGAGTAATGGATGGAGCTTGATCGGCTCGAAGCCCAGAGAGGCTGATATCGAAGGAGACAGGCGTTCCACTTTTGCTGATAATGAGAACAGAAACGTTCAATATGCAAAGGCAGGGATGTGGGGAGGGGTGAGGTGGGGTCGAAGTTCTCTTTTTATGCACCTGAAGGCAAGGGTCCAAACGCATGATGTATGTCCAATCAAAGGTGTAACACAGCGACCCGTCGATAGGTCCCACATCATAATCGTACCGTCTTCGTCACCAGATGCCATGAACCGACCATCAGGTGACATTGCCAACGACAGAATCATGCTCCTGTGA

Coding sequence (CDS)

ATGGATCTTGTGTCCTTCATTTTAAGACAGCCGTACGTCAAATGCAGTGACAAAAACTTATCATATATGCTAAATGAGCAAAGGGCAAAAATGTTTCCATCCTCGAGTAATGGATGGAGCTTGATCGGCTCGAAGCCCAGAGAGGCTGATATCGAAGGAGACAGGCGTTCCACTTTTGCTGATAATGAGAACAGAAACGTTCAATATGCAAAGGCAGGGATGTGGGGAGGGGTGAGGTGGGGTCGAAGTTCTCTTTTTATGCACCTGAAGGCAAGGGTCCAAACGCATGATGTATGTCCAATCAAAGGTGTAACACAGCGACCCGTCGATAGGTCCCACATCATAATCGTACCGTCTTCGTCACCAGATGCCATGAACCGACCATCAGGTGACATTGCCAACGACAGAATCATGCTCCTGTGA

Protein sequence

MDLVSFILRQPYVKCSDKNLSYMLNEQRAKMFPSSSNGWSLIGSKPREADIEGDRRSTFADNENRNVQYAKAGMWGGVRWGRSSLFMHLKARVQTHDVCPIKGVTQRPVDRSHIIIVPSSSPDAMNRPSGDIANDRIMLL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G020780.1Lsi04G020780.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G020780CsGy4G024660Cucumber (Gy14) v2cgyblsiB265
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G020780Silver-seed gourdcarlsiB126
Lsi04G020780Silver-seed gourdcarlsiB179
Lsi04G020780Silver-seed gourdcarlsiB575
Lsi04G020780Cucumber (Chinese Long) v3cuclsiB135
Lsi04G020780Cucumber (Chinese Long) v3cuclsiB306
Lsi04G020780Watermelon (97103) v2lsiwmbB285
Lsi04G020780Watermelon (97103) v2lsiwmbB306
Lsi04G020780Wax gourdlsiwgoB364
Lsi04G020780Wax gourdlsiwgoB405
Lsi04G020780Bottle gourd (USVL1VR-Ls)lsilsiB151
Lsi04G020780Cucumber (Gy14) v1cgylsiB264
Lsi04G020780Cucumber (Gy14) v1cgylsiB437
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB022
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB059
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB120
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB177
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB436
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB439
Lsi04G020780Cucurbita maxima (Rimu)cmalsiB727
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB010
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB045
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB109
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB164
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB425
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB428
Lsi04G020780Cucurbita moschata (Rifu)cmolsiB719
Lsi04G020780Cucurbita pepo (Zucchini)cpelsiB297
Lsi04G020780Cucurbita pepo (Zucchini)cpelsiB459
Lsi04G020780Cucurbita pepo (Zucchini)cpelsiB551
Lsi04G020780Cucurbita pepo (Zucchini)cpelsiB636
Lsi04G020780Cucurbita pepo (Zucchini)cpelsiB677
Lsi04G020780Wild cucumber (PI 183967)cpilsiB119
Lsi04G020780Wild cucumber (PI 183967)cpilsiB285
Lsi04G020780Cucumber (Chinese Long) v2culsiB122
Lsi04G020780Cucumber (Chinese Long) v2culsiB285
Lsi04G020780Melon (DHL92) v3.5.1lsimeB298
Lsi04G020780Melon (DHL92) v3.5.1lsimeB325
Lsi04G020780Watermelon (Charleston Gray)lsiwcgB284
Lsi04G020780Watermelon (Charleston Gray)lsiwcgB306
Lsi04G020780Watermelon (97103) v1lsiwmB294
Lsi04G020780Watermelon (97103) v1lsiwmB313
Lsi04G020780Cucumber (Gy14) v2cgyblsiB051
Lsi04G020780Cucumber (Gy14) v2cgyblsiB109
Lsi04G020780Melon (DHL92) v3.6.1lsimedB311
Lsi04G020780Melon (DHL92) v3.6.1lsimedB341