Lsi04G020520 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G020520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Coffea canephora DH200=94 genomic scaffold, scaffold_19
Location	chr04 : 27624434 .. 27627598 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTTCAATGAAAAATCGTAGCCGAACTCGTTGAAGAAGGTAACAGGCTTGAGAAAGAGTTTTGAAATGTGAAAATTCCAAAGGTTATTTTGGACAATTTTCCAACCTAACTTGGTTTAGTGACCAAAGAGAGAAAGTACAAAAGTTAGGTACCTAAATGGAAATTTTTTTGTCACAAATTGTGAACGACACGGGTAGACGGCGAAGAAAGAACAGACTTCCAGTTTAGCGATGAGATCCTCCCGAAAAACAGAGCAAACCCTGCATTAACCTCCAATCACCTCACTAATTTTCAATTTCTCAACCTTAATTCCCACATTCAAAATCGATTTTTCTTCTTCTTTTGCAGTCTATTTTGCCCTCTTTATCTGTTTTTTCTCTCTCGGACGTGGTTTTTGCAGGTTAAATCCAGATGGGTAAAGCCTCTTCTTCTCGCAAGAAGGAGCGTTCCAAGACTTCTTCATCCCAGGTACTTTCTTTTTACTCTCTCTCGCGTTGAATGTTTCCTTTCTTGATATCCCAATTGGGTATTGGCTTTATTTGATTTCTCCCCTCTCTTGTTGGATGTTCTGTTTGGTTGCTGTGTAATGTTTATAGATTAGGATGTAATTTGGCATAGGATTTGACGAATATATCTGGGTAACCTTCTGTTATTCGATTTATATGCTTGAATTTTAACTTTGGGTGGAGTTTCTTCTTCGTCTTTCACTTTCTTGGTATTTTTTTTTTCTCTCGGTTGGCAACTGGAAAATGTAATATTCGTATTGTGGTTGCGGGTAAAATATGGATGTTGTCTCCCTCTTTTCCCCTTTTACCTCATATAAGTTTGTTTTGATGCCGATGTGAATTTCCTTTCCATCCATTTTTTTTTGTGTTGTTTTATTTTTTGGGTCGAACCATGAAGAGAAGTAGGAGAAAGAGTAAGAGTAGTAGGAAATTGAAGTCCAAGAAGCTGCGGTATCGCCACGATTCTCCTTCTTGCTCAGACACTGATTTTGAGAGTTCAACTTCAATGTCTTCATCTAGCTCGGAGGATGACAAAAAGGTGAGAAGATCTCGATCCAAGACGCGAAAGAATGCGAAGCCTAGTAAAAAGAGATCCAAAAAGCAATCTCATGATCATCAAAGTAGGGAATGCTCTCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAAATGACCGTTGTGAGGTGAAGAAGGCCAACAAAAAGAAGCGTAGAAGAGATGTGAGTGTTGGTGCCTATGGTGACTCTTTGAGCTCCTCAACTTGTGGAAATGGCAGTACAACCAGCAATGAGAGTGAAGTTGTTAGGCGTAGGGGCAGGTGTGGAAAGAGGAAAGGAAATATGGGAAAGACTGAAAGAATTAGAAACAGGTCAAAGAGTCGTTCACCATGCTCTTTATATGGTGAAGGTAGTGATTATCAGAATGAGGTTGATGGTGACAGTTATGTTGAATACACCTTTAAACGACTAAGGTCCATAATTGTTGTAGTAGGGGAGGAAAATAAATTAAAGACCTTTGTTGGGAATGAACAACAAGAAGGGGTCACACATCAGCCTGATGATGACCACCCTTCTTTTGGAGACTTGGACAGTAAGGATGTGATAAGTAAAAGAGAATTAGACTGTGTTATATCAGAAGAGGCACCATTGGTAGAAAACGAAGAAGTGGATATACCTGACAGTAGGAACTCTATCGTTGTAAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAAAAACCATGGAGGAGTAACTAATGATCATTCTTTAGATGAAAGAACTTATGGCTGTTCTGGAAATACTGACAGCGTAAATTGTATTGATTTAGAGTCAATTTTAAGGCAGAGGGCTTTGGAAAACCTTAGAAAGTTCAAAGGGGCTCCCCCAAGGAATGTGGAAGCTATTGCTAATTGCAAAGGTGACCATAATAATGATGCAAAGCAATTGTATTCTCCTGACTCTAAGTCAGTTCATGTGACATCTCCTAGGGATGATGCTGAGATAAATAGTGAAGGGTTCTCTAGACAAGGTGGAGGGAATGCGGTAAATTCAATGACAGTTAAGGAGAATGGTGTTAAATCTACAGATGCAATAGATTCAGCAGTTGCATCTATGCATGACCCAGTCTATTCTTCACAGAATCTGGGTATGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGGAGGTTATAAATGATAGTATTTGCCAGAAGACAGATGTAGATATTTGTTCTACAACTAACAGAAGTAATTTGGTTATTGCAGCTTTGAGGCCTGAGCCAAAAGTTGATTCTATTATAAAGCAGGCATCTGCTGCTGAGGAATCTATCCAAACAAAGCCATCCATATCTGACATTGGTGTAGACGAGACTGCTCAAACTCAGACCCAAATGAGGAATAATGACGATGAAAATATTCATAATGGTTTAGGTTCTTCAGCTCACAAGCCTTCTTCTTCCCTTAATTCTATTTCAGGAGAGAATAGCTTGAATATGTCCAGACACGAGAGTGGAGAAGGCTCACAGTTTGAACAGAAAACCATGTCTGTGATGCGGGGTGGTGAGATGGTGCAGGTGAGGATATTGACTACTGACTAAATTTATATTTTCAGCAATGATTATAATGATGCCAGTTTATTAAGAACTTCTTAGCATGGATCTGCAATTATTCATTTCAGGTGAACTACAAGGTCTACATCCCGAAGAGAGCTCCCGCTTTGACTAGGAAGCAACTCAAGCGGTAACGTAAGATTTCTGATTTTGCAGCCATGTAGGAAGATCCCGTTGCTTGCCATTGAAAAGATTGTAAAGTTCTGGAAGTGATCGATCACTCACTTTCTATGCCAAGTATCTATGAGCCTTAAAACATGAACAATAATTAGTGTAGTCAATTGTTAATATTTATGTCTTTTGACATTTCCATCACAATGATCAAAATGACTTTTTGATCAAACGGGATCCTCATGTTTACAAAGCCTTTCTCATTTAGTTTTGTTTGTGATGCCAAAGCCTGGAATAGGTTAGTTTATGATCATAATTATTTTCACATTCTATTCTATCAGGTTATTGTGAATAAACAAAACCTTCTAGGTGGTGACTCTCAAGTATTAGTGCGAAATATCGAGTTTGGTTCCT

mRNA sequence

TTTTCAATGAAAAATCGTAGCCGAACTCGTTGAAGAAGGTAACAGGCTTGAGAAAGAGTTTTGAAATGTGAAAATTCCAAAGGTTATTTTGGACAATTTTCCAACCTAACTTGGTTTAGTGACCAAAGAGAGAAAGTACAAAAGTTAGGTACCTAAATGGAAATTTTTTTGTCACAAATTGTGAACGACACGGGTAGACGGCGAAGAAAGAACAGACTTCCAGTTTAGCGATGAGATCCTCCCGAAAAACAGAGCAAACCCTGCATTAACCTCCAATCACCTCACTAATTTTCAATTTCTCAACCTTAATTCCCACATTCAAAATCGATTTTTCTTCTTCTTTTGCAGTCTATTTTGCCCTCTTTATCTGTTTTTTCTCTCTCGGACGTGGTTTTTGCAGGTTAAATCCAGATGGGTAAAGCCTCTTCTTCTCGCAAGAAGGAGCGTTCCAAGACTTCTTCATCCCAGGTACTTTCTTTTTACTCTCTCTCGCGTTGAATGTTTCCTTTCTTGATATCCCAATTGGGTATTGGCTTTATTTGATTTCTCCCCTCTCTTGTTGGATGTTCTGTTTGGTTGCTGTGTAATGTTTATAGATTAGGATGTAATTTGGCATAGGATTTGACGAATATATCTGGGTAACCTTCTGTTATTCGATTTATATGCTTGAATTTTAACTTTGGGTGGAGTTTCTTCTTCGTCTTTCACTTTCTTGGTATTTTTTTTTTCTCTCGGTTGGCAACTGGAAAATGTAATATTCGTATTGTGGTTGCGGGTAAAATATGGATGTTGTCTCCCTCTTTTCCCCTTTTACCTCATATAAGTTTGTTTTGATGCCGATGTGAATTTCCTTTCCATCCATTTTTTTTTGTGTTGTTTTATTTTTTGGGTCGAACCATGAAGAGAAGTAGGAGAAAGAGTAAGAGTAGTAGGAAATTGAAGTCCAAGAAGCTGCGGTATCGCCACGATTCTCCTTCTTGCTCAGACACTGATTTTGAGAGTTCAACTTCAATGTCTTCATCTAGCTCGGAGGATGACAAAAAGGTGAGAAGATCTCGATCCAAGACGCGAAAGAATGCGAAGCCTAGTAAAAAGAGATCCAAAAAGCAATCTCATGATCATCAAAGTAGGGAATGCTCTCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAAATGACCGTTGTGAGGTGAAGAAGGCCAACAAAAAGAAGCGTAGAAGAGATGTGAGTGTTGGTGCCTATGGTGACTCTTTGAGCTCCTCAACTTGTGGAAATGGCAGTACAACCAGCAATGAGAGTGAAGTTGTTAGGCGTAGGGGCAGGTGTGGAAAGAGGAAAGGAAATATGGGAAAGACTGAAAGAATTAGAAACAGGTCAAAGAGTCGTTCACCATGCTCTTTATATGGTGAAGGTAGTGATTATCAGAATGAGGTTGATGGTGACAGTTATGTTGAATACACCTTTAAACGACTAAGGTCCATAATTGTTGTAGTAGGGGAGGAAAATAAATTAAAGACCTTTGTTGGGAATGAACAACAAGAAGGGGTCACACATCAGCCTGATGATGACCACCCTTCTTTTGGAGACTTGGACAGTAAGGATGTGATAAGTAAAAGAGAATTAGACTGTGTTATATCAGAAGAGGCACCATTGGTAGAAAACGAAGAAGTGGATATACCTGACAGTAGGAACTCTATCGTTGTAAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAAAAACCATGGAGGAGTAACTAATGATCATTCTTTAGATGAAAGAACTTATGGCTGTTCTGGAAATACTGACAGCGTAAATTGTATTGATTTAGAGTCAATTTTAAGGCAGAGGGCTTTGGAAAACCTTAGAAAGTTCAAAGGGGCTCCCCCAAGGAATGTGGAAGCTATTGCTAATTGCAAAGGTGACCATAATAATGATGCAAAGCAATTGTATTCTCCTGACTCTAAGTCAGTTCATGTGACATCTCCTAGGGATGATGCTGAGATAAATAGTGAAGGGTTCTCTAGACAAGGTGGAGGGAATGCGGTAAATTCAATGACAGTTAAGGAGAATGGTGTTAAATCTACAGATGCAATAGATTCAGCAGTTGCATCTATGCATGACCCAGTCTATTCTTCACAGAATCTGGGTATGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGGAGGTTATAAATGATAGTATTTGCCAGAAGACAGATGTAGATATTTGTTCTACAACTAACAGAAGTAATTTGGTTATTGCAGCTTTGAGGCCTGAGCCAAAAGTTGATTCTATTATAAAGCAGGCATCTGCTGCTGAGGAATCTATCCAAACAAAGCCATCCATATCTGACATTGGTGTAGACGAGACTGCTCAAACTCAGACCCAAATGAGGAATAATGACGATGAAAATATTCATAATGGTTTAGGTTCTTCAGCTCACAAGCCTTCTTCTTCCCTTAATTCTATTTCAGGAGAGAATAGCTTGAATATGTCCAGACACGAGAGTGGAGAAGGCTCACAGTTTGAACAGAAAACCATGTCTGTGATGCGGGGTGGTGAGATGGTGCAGGTGAACTACAAGGTCTACATCCCGAAGAGAGCTCCCGCTTTGACTAGGAAGCAACTCAAGCGGTAACGTAAGATTTCTGATTTTGCAGCCATGTAGGAAGATCCCGTTGCTTGCCATTGAAAAGATTGTAAAGTTCTGGAAGTGATCGATCACTCACTTTCTATGCCAAGTATCTATGAGCCTTAAAACATGAACAATAATTAGTGTAGTCAATTGTTAATATTTATGTCTTTTGACATTTCCATCACAATGATCAAAATGACTTTTTGATCAAACGGGATCCTCATGTTTACAAAGCCTTTCTCATTTAGTTTTGTTTGTGATGCCAAAGCCTGGAATAGGTTAGTTTATGATCATAATTATTTTCACATTCTATTCTATCAGGTTATTGTGAATAAACAAAACCTTCTAGGTGGTGACTCTCAAGTATTAGTGCGAAATATCGAGTTTGGTTCCT

Coding sequence (CDS)

ATGAAGAGAAGTAGGAGAAAGAGTAAGAGTAGTAGGAAATTGAAGTCCAAGAAGCTGCGGTATCGCCACGATTCTCCTTCTTGCTCAGACACTGATTTTGAGAGTTCAACTTCAATGTCTTCATCTAGCTCGGAGGATGACAAAAAGGTGAGAAGATCTCGATCCAAGACGCGAAAGAATGCGAAGCCTAGTAAAAAGAGATCCAAAAAGCAATCTCATGATCATCAAAGTAGGGAATGCTCTCCTCATCCCAGAAAGAGGAAGCATTCAAAGAGAAATGACCGTTGTGAGGTGAAGAAGGCCAACAAAAAGAAGCGTAGAAGAGATGTGAGTGTTGGTGCCTATGGTGACTCTTTGAGCTCCTCAACTTGTGGAAATGGCAGTACAACCAGCAATGAGAGTGAAGTTGTTAGGCGTAGGGGCAGGTGTGGAAAGAGGAAAGGAAATATGGGAAAGACTGAAAGAATTAGAAACAGGTCAAAGAGTCGTTCACCATGCTCTTTATATGGTGAAGGTAGTGATTATCAGAATGAGGTTGATGGTGACAGTTATGTTGAATACACCTTTAAACGACTAAGGTCCATAATTGTTGTAGTAGGGGAGGAAAATAAATTAAAGACCTTTGTTGGGAATGAACAACAAGAAGGGGTCACACATCAGCCTGATGATGACCACCCTTCTTTTGGAGACTTGGACAGTAAGGATGTGATAAGTAAAAGAGAATTAGACTGTGTTATATCAGAAGAGGCACCATTGGTAGAAAACGAAGAAGTGGATATACCTGACAGTAGGAACTCTATCGTTGTAAAGGATGATGGAGTTCAAAATGAAGGAAGCAACAAAAACCATGGAGGAGTAACTAATGATCATTCTTTAGATGAAAGAACTTATGGCTGTTCTGGAAATACTGACAGCGTAAATTGTATTGATTTAGAGTCAATTTTAAGGCAGAGGGCTTTGGAAAACCTTAGAAAGTTCAAAGGGGCTCCCCCAAGGAATGTGGAAGCTATTGCTAATTGCAAAGGTGACCATAATAATGATGCAAAGCAATTGTATTCTCCTGACTCTAAGTCAGTTCATGTGACATCTCCTAGGGATGATGCTGAGATAAATAGTGAAGGGTTCTCTAGACAAGGTGGAGGGAATGCGGTAAATTCAATGACAGTTAAGGAGAATGGTGTTAAATCTACAGATGCAATAGATTCAGCAGTTGCATCTATGCATGACCCAGTCTATTCTTCACAGAATCTGGGTATGATTTCCAATGGAAGCAATGGTATGAATGAACTGAAGCAGGATATTTCTTCATTAGACCAGGAGGTTATAAATGATAGTATTTGCCAGAAGACAGATGTAGATATTTGTTCTACAACTAACAGAAGTAATTTGGTTATTGCAGCTTTGAGGCCTGAGCCAAAAGTTGATTCTATTATAAAGCAGGCATCTGCTGCTGAGGAATCTATCCAAACAAAGCCATCCATATCTGACATTGGTGTAGACGAGACTGCTCAAACTCAGACCCAAATGAGGAATAATGACGATGAAAATATTCATAATGGTTTAGGTTCTTCAGCTCACAAGCCTTCTTCTTCCCTTAATTCTATTTCAGGAGAGAATAGCTTGAATATGTCCAGACACGAGAGTGGAGAAGGCTCACAGTTTGAACAGAAAACCATGTCTGTGATGCGGGGTGGTGAGATGGTGCAGGTGAACTACAAGGTCTACATCCCGAAGAGAGCTCCCGCTTTGACTAGGAAGCAACTCAAGCGGTAA

Protein sequence

MKRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNAKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLSSSTCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVDGDSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKRELDCVISEEAPLVENEEVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSVHVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGMISNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKVDSIIKQASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHNGLGSSAHKPSSSLNSISGENSLNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRKQLKR

Homology

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BLAST of Lsi04G020520 vs. TrEMBL
Match: A0A0A0L248_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G630530 PE=4 SV=1)

HSP 1 Score: 879.8 bits (2272), Expect = 1.9e-252
Identity = 497/590 (84.24%), Postives = 531/590 (90.00%), Query Frame = 1


Query: 2   KRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNA 61
           +RSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTS+ SSSSE  K+VRRSRSKT+KNA
Sbjct: 19  QRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSVPSSSSEHHKRVRRSRSKTQKNA 78

Query: 62  KPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLSS 121
           KPSKKRSKKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + +SLS 
Sbjct: 79  KPSKKRSKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSNSLSC 138

Query: 122 STCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVDG 181
           STCGNGSTTSNESEVVRRRGR GKRK NM KTE  R  SKS SPCSL  EGSDYQNEVD 
Sbjct: 139 STCGNGSTTSNESEVVRRRGRSGKRKENMRKTESGRYMSKSHSPCSLRSEGSDYQNEVDD 198

Query: 182 DSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKRE 241
           +SYVE  F+RLRSIIVVVGEENKL  +VGNEQ EGVT+QP DDHPSFGD+DSKD  SKRE
Sbjct: 199 ESYVENNFRRLRSIIVVVGEENKL--YVGNEQ-EGVTNQPSDDHPSFGDMDSKDATSKRE 258

Query: 242 LDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGCS 301
           LD VI++EAP+VENE EVD+P+ RNS+VV+DDGVQNEGSNKNHGGVTND S DE   GCS
Sbjct: 259 LDYVITKEAPVVENEKEVDVPNFRNSMVVEDDGVQNEGSNKNHGGVTNDRSSDEIKNGCS 318

Query: 302 GNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSVH 361
            NTDS+NCIDLES+LRQRALENLRKFKGAPPRNVE IANCK  HNN AKQL SP SKSVH
Sbjct: 319 DNTDSINCIDLESMLRQRALENLRKFKGAPPRNVETIANCKVSHNNAAKQLCSPISKSVH 378

Query: 362 VTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGMI 421
           VTSPR+DAEINSE FSRQGGGNAVNSM VKENGV S DAIDSAVA+MHDPVYSSQNLG I
Sbjct: 379 VTSPRNDAEINSEQFSRQGGGNAVNSMIVKENGVNSMDAIDSAVATMHDPVYSSQNLGKI 438

Query: 422 SNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKVDSIIKQ 481
           SNGSNGMNE KQDISSLDQE+IND+ICQK + DICSTTNRSNLVIAALRP+PKVDS+IKQ
Sbjct: 439 SNGSNGMNEQKQDISSLDQELINDNICQKANADICSTTNRSNLVIAALRPKPKVDSLIKQ 498

Query: 482 ASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHNGLGSSAHKPSSSLNSISGENS 541
            SAA+ES+QTKPSISD+ V ETAQTQTQMRNN+D NI NGLGSSAHKP SSLNSISGENS
Sbjct: 499 TSAAQESVQTKPSISDVAVGETAQTQTQMRNNNDLNIRNGLGSSAHKP-SSLNSISGENS 558

Query: 542 LNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRKQLKR 591
           L+MS HESGE SQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTR+QLKR
Sbjct: 559 LHMSNHESGESSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRRQLKR 603

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BLAST of Lsi04G020520 vs. TrEMBL
Match: E0CSG6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02260 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 2.4e-50
Identity = 240/624 (38.46%), Postives = 322/624 (51.60%), Query Frame = 1


Query: 3   RSRRKSKS-SRKLKSKKLRYRHDSPSCSDTDFE-SSTSMSSSSSEDDKKVRRSRSKTRKN 62
           R R++SKS SR+ KSKKLR   DS S SD D   SS  +SSSSSE++ + RR+RS+TRK+
Sbjct: 20  RKRKRSKSRSRRNKSKKLRRHDDSLSYSDDDTSRSSMLVSSSSSEENYRSRRARSRTRKD 79

Query: 63  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEV-KKANKKKRRRDVSVGAYGD-S 122
            K SKKR+++ S    S E SP  +KRK SKRN   +  KKA+KKK RRDVS  +    S
Sbjct: 80  VKSSKKRARRSSPRRGSVEGSPRAKKRKGSKRNGDLDARKKAHKKKPRRDVSDSSMSSGS 139

Query: 123 LSSSTCGNGSTTSNESEVVRRRGRCGKR---KGNMGKTERIRNRSKSRS-PCSLYG---E 182
            S STC  G+++S ESE  R RGR  ++   K N+GK + +  RS+ RS  CS Y    E
Sbjct: 140 WSCSTCQGGNSSSGESEFERPRGRSERKERDKRNLGKVKHVNKRSRHRSRSCSSYSRCSE 199

Query: 183 GSDYQNEVDGDSYVEYTFKRLRSIIVVVGE--ENKLKTFVGNEQQEGVTHQPDDDHPSFG 242
            S YQ+    D+  E   +RLRS+I VV E  E   +    +  +E + +  DD +PS  
Sbjct: 200 SSGYQSVERWDA--ENNSRRLRSVITVVREPEEEDGRELDKDAHKEEIIYDHDDGYPSCR 259

Query: 243 DLDSKDVISKRELDCVISEEAPLVENEEVDIPDSRNSIVV---KDDGVQNEGSNKNHGGV 302
             DS D   KREL     +   +   +E  + + R +      KD G QN+GSN +  GV
Sbjct: 260 SNDSNDGGGKRELTYHSEKRKQIESGKEAFVSNIRTTEDKESDKDCGTQNDGSNPSFHGV 319

Query: 303 TNDHSLDERTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAP------PRNVEAIANC 362
             +            N  S +   LESILRQRA+ENLRKF+G        P++V A    
Sbjct: 320 KENK-----------NEASDDIGHLESILRQRAIENLRKFRGVQTNAKTTPKDVTAAVK- 379

Query: 363 KGDHNNDAKQLYSPDSKSVHVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAI 422
                      +SP SK          AE+     SR  G  AV++  V E     T   
Sbjct: 380 -----------HSPTSK----------AELVQIKASRVDGTRAVSANPVVEQSNMPTVG- 439

Query: 423 DSAVASMHDPVYSSQNLGMISNGSNGMNE---LKQDISSLDQEVI-----NDSICQKTDV 482
                   +  YSSQNLG I +G    NE    ++ +    ++V      ND    KT V
Sbjct: 440 -------REFTYSSQNLGKIPDGRYSENEPGASERGVVCPPEKVATTCAPNDDNSSKTAV 499

Query: 483 DICSTTNRSNLVIAALRPEPKVDSI-IKQASAAEES-----IQTKPSISDIGVDETAQTQ 542
           +     N+S    + LR E    S  +KQAS ++E      + T+PS++      TAQT 
Sbjct: 500 NAFG--NKSKPGTSVLRRESFGTSTPLKQASISQEPHRPNLLVTRPSVNTNSA-ATAQTV 559

Query: 543 TQMRNNDDENIHNGLGSSAHKPSSSLNSISGENSLNMSRHESGEGSQFEQKTMSVMRGGE 591
                ++ + + +  G +A  P   L  ISGE S    + E+ EGSQFEQKTMSVMRGGE
Sbjct: 560 LWSSKDNGQQVSDTAGPAASNPPPELKPISGEQSSKEVQGEAKEGSQFEQKTMSVMRGGE 597

[Close]

BLAST of Lsi04G020520 vs. TrEMBL
Match: A5AHG8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019030 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 7.8e-49
Identity = 233/618 (37.70%), Postives = 315/618 (50.97%), Query Frame = 1


Query: 3   RSRRKSKS-SRKLKSKKLRYRHDSPSCSDTDFE-SSTSMSSSSSEDDKKVRRSRSKTRKN 62
           R R++SKS SR+ KSKKLR   DS S SD D   SS  +SSSSSE++ + RR+RS+TRK+
Sbjct: 20  RKRKRSKSRSRRNKSKKLRRHDDSLSYSDDDTSRSSMLVSSSSSEENYRSRRARSRTRKD 79

Query: 63  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEV-KKANKKKRRRDVSVGAYGD-S 122
            K SKKR+++ S    S E SP  +KRK SKRN   +  KKA+KKK RRDVS  +    S
Sbjct: 80  VKSSKKRARRSSPRRGSVEGSPRAKKRKGSKRNGDLDARKKAHKKKPRRDVSDXSMSSGS 139

Query: 123 LSSSTCGNGSTTSNESEVVRRRGRCGKR---KGNMGKTERIRNRSKSRS-PCSLYG---E 182
            S STC  G+++S ESE  R RGR  ++   K N+GK + +  RS+ RS  CS Y    E
Sbjct: 140 WSCSTCQGGNSSSGESEFERPRGRSERKERDKRNLGKVKHVNKRSRHRSRSCSSYSRCSE 199

Query: 183 GSDYQNEVDGDSYVEYTFKRLRSIIVVVGE--ENKLKTFVGNEQQEGVTHQPDDDHPSFG 242
            S YQ+    D+  E   +RLRS+I VV E  E   +    +  +E + +  DD +PS  
Sbjct: 200 SSGYQSVERWDA--ENNSRRLRSVITVVREPEEEDGRELDKDAHKEEIIYDHDDGYPSCR 259

Query: 243 DLDSKDVISKRELDCVISEEAPLVENEEVDIPDSRNSIVV---KDDGVQNEGSNKNHGGV 302
             DS D   KREL     +   +   +E  + + R +      KD G QN+GSN +  GV
Sbjct: 260 SNDSNDGGGKRELTYHSEKRKQIESGKEAFVSNIRTTEDKESDKDCGTQNDGSNPSFHGV 319

Query: 303 TNDHSLDERTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNN 362
             +            N  S +   LESILRQRA+ENLRKF+G     ++ ++ CK     
Sbjct: 320 XENK-----------NEASDDIGHLESILRQRAIENLRKFRGLSIHPLQRLSWCKSRP-- 379

Query: 363 DAKQLYSPDSKSVHVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVAS 422
                                        SR  G  AV++  V E     T         
Sbjct: 380 -----------------------------SRVDGTRAVSANPVVEQSNMPTVG------- 439

Query: 423 MHDPVYSSQNLGMISNGSNGMNE---LKQDISSLDQEVI-----NDSICQKTDVDICSTT 482
             +  YSSQNLG I +G    NE    ++ +    ++V      ND    KT V+     
Sbjct: 440 -REFTYSSQNLGKIPDGRYSENEPGASERGVVCPPEKVAXTCAPNDDNSSKTAVNAFG-- 499

Query: 483 NRSNLVIAALRPEPKVDSI-IKQASAAEES-----IQTKPSISDIGVDETAQTQTQMRNN 542
           N+S    + LR E    S  +KQAS ++E      + T+PS++      TAQT      +
Sbjct: 500 NKSKPGTSVLRRESFGTSTPLKQASISQEXHRPNLLVTRPSVNTNSA-ATAQTVLWSSKD 559

Query: 543 DDENIHNGLGSSAHKPSSSLNSISGENSLNMSRHESGEGSQFEQKTMSVMRGGEMVQVNY 591
           + + + +  G +A  P   L  ISGE S    + E+ EGSQFEQKTMSVMRGGEMVQV+Y
Sbjct: 560 NGQQVSDTXGPAASNPPPELKPISGEQSSKEVQGEAKEGSQFEQKTMSVMRGGEMVQVSY 582

[Close]

BLAST of Lsi04G020520 vs. TrEMBL
Match: M5WPG9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003502mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.2e-44
Identity = 219/612 (35.78%), Postives = 311/612 (50.82%), Query Frame = 1


Query: 2   KRSRRKSKSSRKLKSKKLRYRHDSPSCSDT-DFESSTSMSSSSSEDDKKVRRSRSKTRKN 61
           ++S +    SRK +SKKLR R DSPS SD  D  S  S+SS SS+DD + RR+RS+TR++
Sbjct: 22  RKSSKSKPKSRKYRSKKLRRRDDSPSHSDDGDSRSLESVSSFSSDDDSRSRRARSRTRRD 81

Query: 62  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANK--KKRRRDVSVGAYGD- 121
            K SKKR++++SH H S E SP  +KRK +K  +  E +K ++  KK RR+ S+ +    
Sbjct: 82  LKGSKKRARRRSHIHDSSEDSPRGKKRKSAKNKNDYEARKKSRSRKKPRRNASISSRSSA 141

Query: 122 SLSSSTCGNGSTTSNESEVVRRRGRCGKR---KGNMGK----TERIRNRSKS---RSPCS 181
           S S STC +GS   +E E  R RGR GKR   + ++ K    T+R R RSKS    S CS
Sbjct: 142 SFSCSTCPSGSICGDEIESKRHRGRPGKRNRDESDINKVESGTKRARYRSKSCSSHSQCS 201

Query: 182 LYGEGSDYQNEVDGDSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPS 241
             G G D Q+E       E   +RLRS+I V  E+   +    +  +E + +  DDD+PS
Sbjct: 202 --GRGGDSQSEEKVT--FENKLRRLRSVITVTEEDKHGRWMDKDGHKEEMAY--DDDYPS 261

Query: 242 FGDLDSKDVISKRELDCVISEEAPLVENEEVDIPDSRNSIVVKDDGVQNEGSNKNHGGVT 301
               DS D   KRELD  +      V  + + +   +    +  +    + ++    G  
Sbjct: 262 CRSNDSNDGGCKRELDNHLH-----VVEKRIGVESGKEEKALISNVPIEDLTDSGIAGPV 321

Query: 302 NDHSLDERTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNND 361
           N     E T   SG    +   DLESILRQRALENL++FKG      ++        NND
Sbjct: 322 N-----ENTKEVSGAISHLPGEDLESILRQRALENLKRFKGTTSEENKS--------NND 381

Query: 362 AKQLYSPDSKSVHVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSA--VA 421
            KQ  +  +  V + SP++             G  AV + + KE   +   A  S    A
Sbjct: 382 LKQPSTVKADFVQIESPKES------------GARAVVAKSSKEGATEMVVAKSSKEDAA 441

Query: 422 SMHDPVYSSQNLGMISNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVI 481
            M D     +N    +NG          + + D++V           D  +  N+ NL  
Sbjct: 442 EMVDTTQLLEN----ANGP------PVALGNSDKKV-----------DTIAVLNKPNLAS 501

Query: 482 AALR-PEPKVDSIIKQASAAEESIQTKPSISDIGVD----ETAQT--QTQMRNNDDENIH 541
             LR    K  S  KQA+ ++E    +  + +  VD    ETAQT  QTQ   ++ ++I+
Sbjct: 502 PKLRCHSAKAHSTWKQAARSQEPPHERLLVIENSVDKSTSETAQTVPQTQSTYSNGDDIN 561

Query: 542 NGLGSSAHKPSSSLNSISGENSLNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPK 591
           +  G +A +PS       GEN  +  + E  +GSQFEQKTMSVMRG EMVQV+YKVYIPK
Sbjct: 562 DDRGCTAPEPS-------GENRSDKQQGEGKDGSQFEQKTMSVMRGSEMVQVSYKVYIPK 569

[Close]

BLAST of Lsi04G020520 vs. TrEMBL
Match: A0A067EEB7_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007560mg PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 4.7e-38
Identity = 214/624 (34.29%), Postives = 314/624 (50.32%), Query Frame = 1


Query: 3   RSRRKSKSSRKLKSKKLRYRHDSPS-CSDTD-FESSTSMSSSSSEDDKKVRRSRSKTRKN 62
           + RRKS++ R    KK+R   DS S  SD+D   SS S+SSSSSE D + +RSRS+ +K+
Sbjct: 24  KKRRKSRTRRSNNLKKVRCCDDSVSYSSDSDGSRSSVSISSSSSEGDYRSKRSRSRMQKD 83

Query: 63  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKAN------KKKRRRDVSVGA 122
            K SKKR +++S   +  E SPH +KRK SK+ND  +VKK        KKK RR VSV +
Sbjct: 84  VKVSKKR-RRRSSSCERIEDSPHVKKRKGSKKNDDFQVKKKRLEKKKKKKKSRRGVSVSS 143

Query: 123 YGDSLSSSTCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSR-------SPCS 182
              S  S +C   +++S+E E+ + RGR  ++  +  +  +++N SKSR       S CS
Sbjct: 144 --SSSGSWSCSTCNSSSDEREIEKNRGRSERKYKDGKRLVKVKNESKSRRSRSRSSSLCS 203

Query: 183 LYGEGSDYQNEVDGDSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPS 242
            + E SD+   V+     E   +RLRS+I VV E   +     +E +E + +   DD+PS
Sbjct: 204 QFSEYSDHN--VEDKLAGEANSRRLRSVITVVREGEDVTGMFNDEHKEVMVYD-HDDYPS 263

Query: 243 FGDLDSKDVISKREL---DCVISEEAP---LVENEEVDIPDSRNSIVVKD--DGVQNEGS 302
               DS D  SKREL     V SEE     +V+ E V + + R   V +   +G  ++GS
Sbjct: 264 SRSNDSIDAGSKRELVHNSHVASEEKKHEEIVKGEAV-VSNIRTCKVTESHRNGEGHDGS 323

Query: 303 NKNHGGVTNDHSLDERTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIAN 362
           N +   V  +  +  +    SG+ D     DLESILRQ+ALENLR  +G           
Sbjct: 324 NPSCDRVEMNDDVKGKRNQDSGSVDGY---DLESILRQKALENLRIRRG----------- 383

Query: 363 CKGDHNNDAK-QLYSPDSKSVHVTSPRDDAEINSEGFSRQGGGNAV-----------NSM 422
               +  DAK  +   D  S  V +P      +SE     G G+ +            S 
Sbjct: 384 ----YQADAKVPITQKDVISCEVNTPSTINSRSSENRFSNGDGDELLGASYAAERSSASA 443

Query: 423 TVKENGVKSTDAIDSAVASM-HDPVYSSQNLGMISNGSNGMNELKQDISSLDQEVINDSI 482
            +  N  K +D  D+   S  HD  Y    L + SN        K  +SS      +  +
Sbjct: 444 DLSINNDKISDRNDNGKGSAKHDVQYPPDLLALASNP-------KGHVSSETNNPTSVVL 503

Query: 483 CQKTDVDICSTTNRSNLVIAALRPEPKVDSIIKQASAAEESIQTKPSISDIGVDETAQTQ 542
             K ++   STT +    +  L+  P+ DSI +  +  +  ++  P+++ +G        
Sbjct: 504 VSKPELSSTSTTKKQ---LFTLQGPPQADSIARD-NVDKTMVEATPTVNPLG-------- 563

Query: 543 TQMRNNDDENIHNGLGSSAHKPSSSLNSISGENSLNMSRHESGEGSQFEQKTMSVMRGGE 591
               NN+D+   N   S++  PSS      G  S    + E+ EGSQ++QKTM+VMRGGE
Sbjct: 564 ---DNNNDKETKNV--SASDDPSSCTQLACGGTSSKKPQDETNEGSQYQQKTMTVMRGGE 598

[Close]

BLAST of Lsi04G020520 vs. TAIR10
Match: AT5G53930.1 (AT5G53930.1 unknown protein)

HSP 1 Score: 80.1 bits (196), Expect = 5.0e-15
Identity = 166/604 (27.48%), Postives = 260/604 (43.05%), Query Frame = 1


Query: 7   KSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNAKPSKK 66
           K K S++ KSKK+R   D    S +D     S   SSSEDD      R K ++ +K SKK
Sbjct: 22  KKKKSKRNKSKKIRRIKDESESSGSD-----SSLYSSSEDDY-----RRKKKRRSKLSKK 81

Query: 67  RSKKQSHDHQSRECSPHPR---KRKHSKRNDRCEVKKANK----KKRRRDVSVGAYGDSL 126
           RS+K+    +S + S   R   K+K SKR D    KK  K    K+R+RD+S  +     
Sbjct: 82  RSRKRYSSSESDDDSDDDRLLKKKKRSKRKDENVGKKKKKVVSRKRRKRDLSSSSTSSEQ 141

Query: 127 SSSTCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEV 186
           S +   +GS + +     R RGR       +GK +  R+RS+      L GE  +     
Sbjct: 142 SDN---DGSESDDGKRWSRDRGR------RLGKVKDSRSRSRDE----LEGESEEPDECW 201

Query: 187 DGDSYV--EYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVI 246
            G+  V  E   +RL+SI+VV           G  ++E                D +DV 
Sbjct: 202 QGEDEVIPEKNPRRLKSIVVVSYNYGN-----GERKEE----------------DDRDVY 261

Query: 247 SKR---ELDCVISEEAPLVENEEVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDE 306
             R     +   SE++  ++ E +D   S + I   D+G      ++       D+SL +
Sbjct: 262 MTRGGGNRELGYSEDSDEMDGESID---SYSRIRADDNGFGEYNKSETSKVSHTDNSLKD 321

Query: 307 RTYGCSGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSP 366
                          DLE+IL++RALENL++F+G   ++  A                  
Sbjct: 322 D--------------DLEAILKKRALENLKRFRGVTQKSGIA------------------ 381

Query: 367 DSKSVHVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSS 426
             K V   S  +  +I SE    Q            ++ +      DSAV+     + +S
Sbjct: 382 -KKEVSSVSEGEPMQIESEKVESQ------------DHDLMEQKLCDSAVSK---DLENS 441

Query: 427 QNLGMISNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKV 486
           + +  + N       L    S  DQ+   D+   K    + S T +  LV   L  +   
Sbjct: 442 EKILHVINVKESGTALANSASQQDQQS-GDTAKVKVSSGLSSCTTKRKLVRPVLSKDSLN 501

Query: 487 DSIIKQASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHN-------GLGSSAHK 546
            +  K+AS ++++       S +  +    T   +  N+ E+I            SS+H 
Sbjct: 502 LASKKEASGSQDAEAESIDGSTVDKNCLESTLALVTKNEGEHIEPTKVSSTLNAESSSHA 529

Query: 547 PSSSLNSISG-ENSLNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRK 591
            +  ++ + G   S   +  E+ + SQ+EQKTM+VMRGGEMVQV+YKVYIPK+A +L R+
Sbjct: 562 DTEEVDEVKGGSQSEQKTIDETKDESQYEQKTMTVMRGGEMVQVSYKVYIPKKASSLGRR 529

[Close]

BLAST of Lsi04G020520 vs. NCBI nr
Match: gi|449456727|ref|XP_004146100.1| (PREDICTED: uncharacterized protein LOC101205593 isoform X1 [Cucumis sativus])

HSP 1 Score: 879.8 bits (2272), Expect = 2.7e-252
Identity = 497/590 (84.24%), Postives = 531/590 (90.00%), Query Frame = 1


Query: 2   KRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNA 61
           +RSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTS+ SSSSE  K+VRRSRSKT+KNA
Sbjct: 19  QRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSVPSSSSEHHKRVRRSRSKTQKNA 78

Query: 62  KPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLSS 121
           KPSKKRSKKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + +SLS 
Sbjct: 79  KPSKKRSKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSNSLSC 138

Query: 122 STCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVDG 181
           STCGNGSTTSNESEVVRRRGR GKRK NM KTE  R  SKS SPCSL  EGSDYQNEVD 
Sbjct: 139 STCGNGSTTSNESEVVRRRGRSGKRKENMRKTESGRYMSKSHSPCSLRSEGSDYQNEVDD 198

Query: 182 DSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKRE 241
           +SYVE  F+RLRSIIVVVGEENKL  +VGNEQ EGVT+QP DDHPSFGD+DSKD  SKRE
Sbjct: 199 ESYVENNFRRLRSIIVVVGEENKL--YVGNEQ-EGVTNQPSDDHPSFGDMDSKDATSKRE 258

Query: 242 LDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGCS 301
           LD VI++EAP+VENE EVD+P+ RNS+VV+DDGVQNEGSNKNHGGVTND S DE   GCS
Sbjct: 259 LDYVITKEAPVVENEKEVDVPNFRNSMVVEDDGVQNEGSNKNHGGVTNDRSSDEIKNGCS 318

Query: 302 GNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSVH 361
            NTDS+NCIDLES+LRQRALENLRKFKGAPPRNVE IANCK  HNN AKQL SP SKSVH
Sbjct: 319 DNTDSINCIDLESMLRQRALENLRKFKGAPPRNVETIANCKVSHNNAAKQLCSPISKSVH 378

Query: 362 VTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGMI 421
           VTSPR+DAEINSE FSRQGGGNAVNSM VKENGV S DAIDSAVA+MHDPVYSSQNLG I
Sbjct: 379 VTSPRNDAEINSEQFSRQGGGNAVNSMIVKENGVNSMDAIDSAVATMHDPVYSSQNLGKI 438

Query: 422 SNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKVDSIIKQ 481
           SNGSNGMNE KQDISSLDQE+IND+ICQK + DICSTTNRSNLVIAALRP+PKVDS+IKQ
Sbjct: 439 SNGSNGMNEQKQDISSLDQELINDNICQKANADICSTTNRSNLVIAALRPKPKVDSLIKQ 498

Query: 482 ASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHNGLGSSAHKPSSSLNSISGENS 541
            SAA+ES+QTKPSISD+ V ETAQTQTQMRNN+D NI NGLGSSAHKP SSLNSISGENS
Sbjct: 499 TSAAQESVQTKPSISDVAVGETAQTQTQMRNNNDLNIRNGLGSSAHKP-SSLNSISGENS 558

Query: 542 LNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRKQLKR 591
           L+MS HESGE SQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTR+QLKR
Sbjct: 559 LHMSNHESGESSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRRQLKR 603

[Close]

BLAST of Lsi04G020520 vs. NCBI nr
Match: gi|659127415|ref|XP_008463689.1| (PREDICTED: transcriptional regulator ATRX homolog isoform X1 [Cucumis melo])

HSP 1 Score: 876.7 bits (2264), Expect = 2.3e-251
Identity = 495/591 (83.76%), Postives = 528/591 (89.34%), Query Frame = 1


Query: 1   MKRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKN 60
           MKRSRRKSKSSRKLKSKK RYRHDSPSCSDTDFESSTS+ SSSSEDDKKVRRSRSKTRKN
Sbjct: 39  MKRSRRKSKSSRKLKSKKQRYRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKN 98

Query: 61  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLS 120
            KPSKKR KKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + DSLS
Sbjct: 99  VKPSKKRFKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSDSLS 158

Query: 121 SSTCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVD 180
            STCGNG+TTSNESEVVRRRGR  KRKGNM KT   R  SKSRSPCSL+ EGSDYQNEVD
Sbjct: 159 CSTCGNGTTTSNESEVVRRRGRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVD 218

Query: 181 GDSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKR 240
            DSYVE  F+RLRSIIVVVGEENKLKTFVGNEQQE VT+Q  DDHPS G++DSKD   KR
Sbjct: 219 DDSYVEKNFRRLRSIIVVVGEENKLKTFVGNEQQE-VTNQLSDDHPSSGEMDSKDATGKR 278

Query: 241 ELDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGC 300
            LD V+++EA +VENE EVD+P+ RNS+VVKD GVQNEGSNKNHGGVTNDHS DE   GC
Sbjct: 279 GLDYVVTKEALVVENEKEVDVPNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGC 338

Query: 301 SGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSV 360
           S NTDS+NCIDLES+LRQRALENLRKFKGA PRNVE IANCK DHNN AKQL SP S SV
Sbjct: 339 SDNTDSINCIDLESMLRQRALENLRKFKGASPRNVETIANCKVDHNNAAKQLRSPVSDSV 398

Query: 361 HVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGM 420
           HVTSPR++AEINS+ FSRQGGGNA+NSM +KENGVKS DAIDSAVA+MHDPVYSSQNLG 
Sbjct: 399 HVTSPRNNAEINSKRFSRQGGGNAINSMILKENGVKSMDAIDSAVATMHDPVYSSQNLGK 458

Query: 421 ISNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKVDSIIK 480
           ISNGSNGMNE KQDISSLDQEVIND+ICQK D DICSTTNRSNLVIAALRPEPKVDS+IK
Sbjct: 459 ISNGSNGMNEQKQDISSLDQEVINDNICQKADADICSTTNRSNLVIAALRPEPKVDSLIK 518

Query: 481 QASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHNGLGSSAHKPSSSLNSISGEN 540
           Q SAA+ES+QTKPSISD+GV ETAQ QTQMRNNDD NI NGLGSSA++P SSLNSISGE+
Sbjct: 519 QTSAAQESVQTKPSISDVGVGETAQIQTQMRNNDDLNIRNGLGSSAYEP-SSLNSISGED 578

Query: 541 SLNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRKQLKR 591
           SLNMS  ESGE SQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTR+QLKR
Sbjct: 579 SLNMSNQESGESSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRRQLKR 626

[Close]

BLAST of Lsi04G020520 vs. NCBI nr
Match: gi|659127417|ref|XP_008463691.1| (PREDICTED: suppressor protein SRP40 isoform X2 [Cucumis melo])

HSP 1 Score: 873.2 bits (2255), Expect = 2.5e-250
Identity = 493/590 (83.56%), Postives = 527/590 (89.32%), Query Frame = 1


Query: 2   KRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNA 61
           +RSRRKSKSSRKLKSKK RYRHDSPSCSDTDFESSTS+ SSSSEDDKKVRRSRSKTRKN 
Sbjct: 19  QRSRRKSKSSRKLKSKKQRYRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKNV 78

Query: 62  KPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLSS 121
           KPSKKR KKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + DSLS 
Sbjct: 79  KPSKKRFKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSDSLSC 138

Query: 122 STCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVDG 181
           STCGNG+TTSNESEVVRRRGR  KRKGNM KT   R  SKSRSPCSL+ EGSDYQNEVD 
Sbjct: 139 STCGNGTTTSNESEVVRRRGRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVDD 198

Query: 182 DSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKRE 241
           DSYVE  F+RLRSIIVVVGEENKLKTFVGNEQQE VT+Q  DDHPS G++DSKD   KR 
Sbjct: 199 DSYVEKNFRRLRSIIVVVGEENKLKTFVGNEQQE-VTNQLSDDHPSSGEMDSKDATGKRG 258

Query: 242 LDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGCS 301
           LD V+++EA +VENE EVD+P+ RNS+VVKD GVQNEGSNKNHGGVTNDHS DE   GCS
Sbjct: 259 LDYVVTKEALVVENEKEVDVPNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGCS 318

Query: 302 GNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSVH 361
            NTDS+NCIDLES+LRQRALENLRKFKGA PRNVE IANCK DHNN AKQL SP S SVH
Sbjct: 319 DNTDSINCIDLESMLRQRALENLRKFKGASPRNVETIANCKVDHNNAAKQLRSPVSDSVH 378

Query: 362 VTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGMI 421
           VTSPR++AEINS+ FSRQGGGNA+NSM +KENGVKS DAIDSAVA+MHDPVYSSQNLG I
Sbjct: 379 VTSPRNNAEINSKRFSRQGGGNAINSMILKENGVKSMDAIDSAVATMHDPVYSSQNLGKI 438

Query: 422 SNGSNGMNELKQDISSLDQEVINDSICQKTDVDICSTTNRSNLVIAALRPEPKVDSIIKQ 481
           SNGSNGMNE KQDISSLDQEVIND+ICQK D DICSTTNRSNLVIAALRPEPKVDS+IKQ
Sbjct: 439 SNGSNGMNEQKQDISSLDQEVINDNICQKADADICSTTNRSNLVIAALRPEPKVDSLIKQ 498

Query: 482 ASAAEESIQTKPSISDIGVDETAQTQTQMRNNDDENIHNGLGSSAHKPSSSLNSISGENS 541
            SAA+ES+QTKPSISD+GV ETAQ QTQMRNNDD NI NGLGSSA++P SSLNSISGE+S
Sbjct: 499 TSAAQESVQTKPSISDVGVGETAQIQTQMRNNDDLNIRNGLGSSAYEP-SSLNSISGEDS 558

Query: 542 LNMSRHESGEGSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRKQLKR 591
           LNMS  ESGE SQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTR+QLKR
Sbjct: 559 LNMSNQESGESSQFEQKTMSVMRGGEMVQVNYKVYIPKRAPALTRRQLKR 605

[Close]

BLAST of Lsi04G020520 vs. NCBI nr
Match: gi|778695851|ref|XP_011654057.1| (PREDICTED: uncharacterized protein LOC101205593 isoform X2 [Cucumis sativus])

HSP 1 Score: 607.4 bits (1565), Expect = 2.6e-170
Identity = 347/419 (82.82%), Postives = 371/419 (88.54%), Query Frame = 1


Query: 2   KRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKNA 61
           +RSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTS+ SSSSE  K+VRRSRSKT+KNA
Sbjct: 19  QRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSVPSSSSEHHKRVRRSRSKTQKNA 78

Query: 62  KPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLSS 121
           KPSKKRSKKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + +SLS 
Sbjct: 79  KPSKKRSKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSNSLSC 138

Query: 122 STCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVDG 181
           STCGNGSTTSNESEVVRRRGR GKRK NM KTE  R  SKS SPCSL  EGSDYQNEVD 
Sbjct: 139 STCGNGSTTSNESEVVRRRGRSGKRKENMRKTESGRYMSKSHSPCSLRSEGSDYQNEVDD 198

Query: 182 DSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKRE 241
           +SYVE  F+RLRSIIVVVGEENKL  +VGNEQ EGVT+QP DDHPSFGD+DSKD  SKRE
Sbjct: 199 ESYVENNFRRLRSIIVVVGEENKL--YVGNEQ-EGVTNQPSDDHPSFGDMDSKDATSKRE 258

Query: 242 LDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGCS 301
           LD VI++EAP+VENE EVD+P+ RNS+VV+DDGVQNEGSNKNHGGVTND S DE   GCS
Sbjct: 259 LDYVITKEAPVVENEKEVDVPNFRNSMVVEDDGVQNEGSNKNHGGVTNDRSSDEIKNGCS 318

Query: 302 GNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSVH 361
            NTDS+NCIDLES+LRQRALENLRKFKGAPPRNVE IANCK  HNN AKQL SP SKSVH
Sbjct: 319 DNTDSINCIDLESMLRQRALENLRKFKGAPPRNVETIANCKVSHNNAAKQLCSPISKSVH 378

Query: 362 VTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGM 420
           VTSPR+DAEINSE FSRQGGGNAVNSM VKENGV S DAIDSAVA+MHDPVYSSQNL +
Sbjct: 379 VTSPRNDAEINSEQFSRQGGGNAVNSMIVKENGVNSMDAIDSAVATMHDPVYSSQNLAL 433

[Close]

BLAST of Lsi04G020520 vs. NCBI nr
Match: gi|659127419|ref|XP_008463692.1| (PREDICTED: transcriptional regulator ATRX homolog isoform X3 [Cucumis melo])

HSP 1 Score: 604.7 bits (1558), Expect = 1.7e-169
Identity = 344/420 (81.90%), Postives = 369/420 (87.86%), Query Frame = 1


Query: 1   MKRSRRKSKSSRKLKSKKLRYRHDSPSCSDTDFESSTSMSSSSSEDDKKVRRSRSKTRKN 60
           MKRSRRKSKSSRKLKSKK RYRHDSPSCSDTDFESSTS+ SSSSEDDKKVRRSRSKTRKN
Sbjct: 39  MKRSRRKSKSSRKLKSKKQRYRHDSPSCSDTDFESSTSVPSSSSEDDKKVRRSRSKTRKN 98

Query: 61  AKPSKKRSKKQSHDHQSRECSPHPRKRKHSKRNDRCEVKKANKKKRRRDVSVGAYGDSLS 120
            KPSKKR KKQSHD QSRECSP+PRKRKHSKRNDR EV KANKKKRRRDVSVG + DSLS
Sbjct: 99  VKPSKKRFKKQSHDRQSRECSPNPRKRKHSKRNDRREVNKANKKKRRRDVSVG-HSDSLS 158

Query: 121 SSTCGNGSTTSNESEVVRRRGRCGKRKGNMGKTERIRNRSKSRSPCSLYGEGSDYQNEVD 180
            STCGNG+TTSNESEVVRRRGR  KRKGNM KT   R  SKSRSPCSL+ EGSDYQNEVD
Sbjct: 159 CSTCGNGTTTSNESEVVRRRGRFAKRKGNMRKTGSGRYMSKSRSPCSLHSEGSDYQNEVD 218

Query: 181 GDSYVEYTFKRLRSIIVVVGEENKLKTFVGNEQQEGVTHQPDDDHPSFGDLDSKDVISKR 240
            DSYVE  F+RLRSIIVVVGEENKLKTFVGNEQQE VT+Q  DDHPS G++DSKD   KR
Sbjct: 219 DDSYVEKNFRRLRSIIVVVGEENKLKTFVGNEQQE-VTNQLSDDHPSSGEMDSKDATGKR 278

Query: 241 ELDCVISEEAPLVENE-EVDIPDSRNSIVVKDDGVQNEGSNKNHGGVTNDHSLDERTYGC 300
            LD V+++EA +VENE EVD+P+ RNS+VVKD GVQNEGSNKNHGGVTNDHS DE   GC
Sbjct: 279 GLDYVVTKEALVVENEKEVDVPNYRNSMVVKDGGVQNEGSNKNHGGVTNDHSSDEIKNGC 338

Query: 301 SGNTDSVNCIDLESILRQRALENLRKFKGAPPRNVEAIANCKGDHNNDAKQLYSPDSKSV 360
           S NTDS+NCIDLES+LRQRALENLRKFKGA PRNVE IANCK DHNN AKQL SP S SV
Sbjct: 339 SDNTDSINCIDLESMLRQRALENLRKFKGASPRNVETIANCKVDHNNAAKQLRSPVSDSV 398

Query: 361 HVTSPRDDAEINSEGFSRQGGGNAVNSMTVKENGVKSTDAIDSAVASMHDPVYSSQNLGM 420
           HVTSPR++AEINS+ FSRQGGGNA+NSM +KENGVKS DAIDSAVA+MHDPVYSSQNL +
Sbjct: 399 HVTSPRNNAEINSKRFSRQGGGNAINSMILKENGVKSMDAIDSAVATMHDPVYSSQNLAL 456

The following BLAST results are available for this feature:

BLAST of Lsi04G020520 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G020520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L248_CUCSA	1.9e-252	84.24	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G630530 PE=4 SV=1	[more]
E0CSG6_VITVI	2.4e-50	38.46	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g02260 PE=4 SV=...	[more]
A5AHG8_VITVI	7.8e-49	37.70	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_019030 PE=4 SV=1	[more]
M5WPG9_PRUPE	1.2e-44	35.78	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003502mg PE=4 SV=1	[more]
A0A067EEB7_CITSI	4.7e-38	34.29	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g007560mg PE=4 SV=1	[more]

BLAST of Lsi04G020520 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G53930.1	5.0e-15	27.48	unknown protein	[more]

BLAST of Lsi04G020520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449456727\|ref\|XP_004146100.1\|	2.7e-252	84.24	PREDICTED: uncharacterized protein LOC101205593 isoform X1 [Cucumis sativus]	[more]
gi\|659127415\|ref\|XP_008463689.1\|	2.3e-251	83.76	PREDICTED: transcriptional regulator ATRX homolog isoform X1 [Cucumis melo]	[more]
gi\|659127417\|ref\|XP_008463691.1\|	2.5e-250	83.56	PREDICTED: suppressor protein SRP40 isoform X2 [Cucumis melo]	[more]
gi\|778695851\|ref\|XP_011654057.1\|	2.6e-170	82.82	PREDICTED: uncharacterized protein LOC101205593 isoform X2 [Cucumis sativus]	[more]
gi\|659127419\|ref\|XP_008463692.1\|	1.7e-169	81.90	PREDICTED: transcriptional regulator ATRX homolog isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G020520.1	Lsi04G020520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36808	FAMILY NOT NAMED	coord: 1..590 score: 2.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G020520	Csa4G630530	Cucumber (Chinese Long) v2	culsiB283
Lsi04G020520	CSPI04G23280	Wild cucumber (PI 183967)	cpilsiB283
Lsi04G020520	Cucsa.122970	Cucumber (Gy14) v1	cgylsiB185
Lsi04G020520	CmaCh01G012180	Cucurbita maxima (Rimu)	cmalsiB432
Lsi04G020520	CmoCh01G012730	Cucurbita moschata (Rifu)	cmolsiB421
Lsi04G020520	Cla023365	Watermelon (97103) v1	lsiwmB333
Lsi04G020520	MELO3C025606	Melon (DHL92) v3.5.1	lsimeB315
Lsi04G020520	ClCG11G017870	Watermelon (Charleston Gray)	lsiwcgB259
Lsi04G020520	MELO3C025606.2	Melon (DHL92) v3.6.1	lsimedB331
Lsi04G020520	Cla97C11G223890	Watermelon (97103) v2	lsiwmbB266
Lsi04G020520	Bhi09G002825	Wax gourd	lsiwgoB402
Lsi04G020520	Cp4.1LG02g01770	Cucurbita pepo (Zucchini)	cpelsiB456
Lsi04G020520	CsGy4G021650	Cucumber (Gy14) v2	cgyblsiB263
Lsi04G020520	Carg17083	Silver-seed gourd	carlsiB151
Lsi04G020520	Carg14706	Silver-seed gourd	carlsiB286
Lsi04G020520	CsaV3_4G033500	Cucumber (Chinese Long) v3	cuclsiB304

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G020520	Bottle gourd (USVL1VR-Ls)	lsilsiB105
Lsi04G020520	Cucurbita maxima (Rimu)	cmalsiB023
Lsi04G020520	Cucurbita maxima (Rimu)	cmalsiB122
Lsi04G020520	Cucurbita maxima (Rimu)	cmalsiB311
Lsi04G020520	Cucurbita maxima (Rimu)	cmalsiB439
Lsi04G020520	Cucurbita moschata (Rifu)	cmolsiB011
Lsi04G020520	Cucurbita moschata (Rifu)	cmolsiB110
Lsi04G020520	Cucurbita moschata (Rifu)	cmolsiB299
Lsi04G020520	Cucurbita pepo (Zucchini)	cpelsiB637
Lsi04G020520	Watermelon (Charleston Gray)	lsiwcgB299
Lsi04G020520	Watermelon (97103) v1	lsiwmB310