Lsi04G018800 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGAGTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGGTTTAGATTCTGCTCGTCTCTACTTCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTTGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGAGATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGGTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCAAATTTCCAGAATTTCAGTTTCTCTACATCACAAGATGGTAGGCCAAATATTCTTCTTATAATTTTTAATTTTGGAGCCGATGAATATCATTTATTGAGGTTTCCCCCCTTTTGTTCTGTAACCTCCCTTGGTATGGGGTCGACTCTCCCTCTTTTGTAGTTTAATTACATCAATTAAATTGTTTCTTATAAGAAGAAAAAGTCATTTATTGAGGGTTTATAAATGCAATATTAATTTTCTTTTACATGTTTAGTACTTAGCTGCTTGGTTTGATTGATGTTAGTTGTGCTTCTTTCTACAGTACACACAATGCTTCTGTAGGTTGCTGAAATTCAAATTTCCCTTCCCTTCGATGTTTTACCTAGACGTAATAAAGAGCCATCTGTTTAGATTGCCATTTTGCTATATATTTGGAGAATTTCTCTTAGTGAAAGAGCGTTGTGAGAAAATGATTTATGTTTCAATGTATATTTTTGGGTGAATTATGGATTGGAGGCCATGTATTTGCATTATTTTGATATTTATTATTGCTTGATAGTTTGAATGCTTGCTTGCCCGAGTATTTAGTTGTTCATTTCATCTTTATCCACTTGTTGGGTAGTGTTCCTTCTATAGTAATTTCTTAGCGTTAGTAGCCACCTTAGTGAGAAGCTTTCAATTAACAGGGTGTTGGATCGATGAAATGCTGGTACAGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCAACCAACTGTAAGTGGATCTCTGTCATATTCATATATGCATGCATCGACTGGTTCTTGTTTTTTACTCCAACAAGTTCCTGCTTTGCAATCAATGTGAATGAAGCTTACTGATTTTGGTTCAATTCAGAAAATCCTTGAGGTATTGTTATAGTCTTATTGTCTTTGGAAAGAGGGAAATGAAATCATAGGTGTGCATCATTATTTTTCCTATTGTGTGAAGGTGGGTAAGGACAGAATTCAAAACTGTAAGCATGTACATTCTTTCCCGTTACATTATTACTTTCCCCTTCCCCCATTTTTATTATTGTCTGCAGAATCATGTTTATTATTATTATTATTATTTATTTATTTCTCTTCCATCCCCTTGAAACTGGCCAGTCTTTTTTAATTTGGTGCTGAAAATTTCCGAGATAATTTTATGAATCATCAAGGAATCAGGAAGATTAACAGTAGTGGTTGATGGAAGGGTAGCTTTATTGCAATGCTGCATTTGCTGTGCCTTAGGGATGCATTTGTGAGTGTAATAGATTTGATATATGATTTGAACTTGTGTCCATGTCCTTAAGTTGTGTCCATGTCTGATGGCCGTGGGGACTGTTGACGGAGATTAGTTTGGTTCATGAGTGAATTGGAGTCTAGAGTCTATATTTCCTAGAAGCTTGAAGATAATTGTGTTGGATCTTTTGAACTCTGTGCTACACATGTTTGACGGACCTTGGAAGCTCTTCTGTAGAACAATTTTACAGGCACATCAATCTTTGCGCATCATTTTTTTTTAGAAACCAAGGATATCATTCAAAACAACCTAAAGGACAAGGGGATAAAGCATCCCCTTCCCAAAGGAAGTGTTACAAAAAGACCTTCCAATCTAAGTTAATGGTGTCTATGGTGTTGTTACAAAACAACTATGTTTAGGCCGTTAAACAACCTATGTTCTGCATATCATGGCTTTTCACCCTAGCATTGAGTCATGGACTGATTTTAGTTAACTTTTTCAAAATTTTAACAAGTTCGTGAGTGTTACCTAGAAGGATACATACTCATAGTTGTGCTGTCGGGAGCTTGAAAGTTTAGTATTGGCTAGGCAATTACGTAGTCCATTTGTATAAAATCATACTACTTCATGTAGATTTGGCACTGTCTTCGTTCAGTTTCTGTTGTTGCACCAGCATCACCAACCCAACTTTTCAGCCCTGCACCTAATACACAGGCTCCCCTTTCTCTCGCTCCATATATTTTTTCCATTTTTGTTGTTGATCTAAGGGCTTCCTGACTTCACTTCATCATATAGTTTTTCTTCCTCCCATTTTTGTTTTTGCCTTTTCTTGCTTGGCTTGCATGTCTGTTTGCTCGATCTGCATCTTCTTTTACTTAAAATGTTTGTTTTAGCTTTATTCTTTTTGGATGTCAATGGCATAATGTTTTTTTTTTTTTTGGTTCCTGTTTCTTCAGGAATCAGTTCATGTTCTGTACATCAGTGGATTTTCAAAGCCTCGTAGCTTGCAACTTCAAAACCAGTTCCATTCATTCATGGCTGAGCCGTTGATCAGCTCATCATGCCTGCGCTCGGATTGTTGTTTCAATACCCAATGCTGACAAATTGTGCCTGTTCGCATCTCCAGTGAAGACTGTACATATGTATTACTTTCTGGGTAAGCCAGTTTCATCGTCATCTCCTCTAACCGTTGGACAGCTTTATCTTATTTTGTTGGAGGACAACTCTTGAAGAAAGGGGTTTGTTAAGCTAGCTAACCAGTGATGGTAATGGAGTGGAAAGAACTATTTCCTTTGAATTCTAGTAGAGATTTTTTTCATGTTAGTCATACCTTCATGTTCCTAGACTAGTCAGTATGATGTGTAAAATTTGGGAAATACGATAGAGAGCAGAAATATACAAACTTGAGGTTCCTGAAGAAATATTCCCTGTTTTTTCCTTTTTCTATTCTTGATGTTGTTCTGCGATCATGACTTGAGCTCTTCACAATACATCTCTTTTGCTTTTAAA ATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGAGTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGGTTTAGATTCTGCTCGTCTCTACTTCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTTGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGAGATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGGTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCAAATTTCCAGAATTTCAGTTTCTCTACATCACAAGATGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCAACCAACTGAATCAGTTCATGTTCTGTACATCAGTGGATTTTCAAAGCCTCGTAGCTTGCAACTTCAAAACCAGTTCCATTCATTCATGGCTGAGCCGTTGATCAGCTCATCATGCCTGCGCTCGGATTGTTGTTTCAATACCCAATGCTGACAAATTGTGCCTGTTCGCATCTCCAGTGAAGACTGTACATATGTATTACTTTCTGGGTAAGCCAGTTTCATCGTCATCTCCTCTAACCGTTGGACAGCTTTATCTTATTTTGTTGGAGGACAACTCTTGAAGAAAGGGGTTTGTTAAGCTAGCTAACCAGTGATGGTAATGGAGTGGAAAGAACTATTTCCTTTGAATTCTAGTAGAGATTTTTTTCATGTTAGTCATACCTTCATGTTCCTAGACTAGTCAGTATGATGTGTAAAATTTGGGAAATACGATAGAGAGCAGAAATATACAAACTTGAGGTTCCTGAAGAAATATTCCCTGTTTTTTCCTTTTTCTATTCTTGATGTTGTTCTGCGATCATGACTTGAGCTCTTCACAATACATCTCTTTTGCTTTTAAA ATGGCAGGCAATGGCCTGCCATCATTGGGTCGTGTGAAGCTTACCGATATAGCACCATCTGAAGGAGTTCCTTCTGAGTCTTTCAAATTGTCGGTCTCAACTCTATCACATTCACTAGCTCAATACTCTGCTGCCATCATTCAATTCCCTGCTTGTGATGGGGCTCTTTTAAGGTCCGGTTTAGATTCTGCTCGTCTCTACTTCCACCAGAGGGCTGCATGTTCATCTGCTGAGTTGATGCAAAACAATGATTCACGGGAGTGGTGCAGAACTTCTGGTTACTATGTGGATGCTCAGATGTGGCAAGAAACATATGATTATAGGCCTGGATTGACTCCAGTTGAGCCCAGCAATGGAATGGAGTTACAACCTGCGGGTTTGCCAGACATTTTTGCTCTCTATGGAAAGGCATCTCGAATTATTTTGGATGCCATCAGCTTCTACCTAAACTTGCGCAGCTCTCCTTTCACGGAAATACTTGATAATGTCCCCCTAAGAAGCAGGGAGATATCATCTTCTGTGTTGTCTGTGTGCTGTTATGGGAGACCCTCATTTCATGGAGAGCATCACCATAAACTAACTGCTCAAGAGGATAGCCAGTTGGCTATGTATGCATCGGACCATGACCATCAAATTGATAAAAGTCTTATTACTCTGGTCAAGTCGGATAAGGCAGGTTTACTAATAAAGGATTTCAATGGTAGATGGATTCTTGTGGATGGTGATCTTGGCCCTCAAGATGCTATAGTTTATCCTGGACTTGCACTCTATCAAGCAACTGCGGGGTATGTGAATCCTGCTTTGCTCAGAACAGATGTGAATAATATTCAAGGTAGTATGTATGGACGGTGTTCCTTATCATTCAAACTCATGCCTAAATCCATGACTAGCCTCAGTTGTTCAGAAATGAGAGCAGCTGGCCATGGGGTAGATGTTCAGTTCCAGCTTCCAGTACCAGTGGATGACTTTATGCAGAGATCACACTCAACTGACGAACTTTTTAACCGCCCAAATTTCCAGAATTTCAGTTTCTCTACATCACAAGATGGATCCATAAAAATGAGGAGGAGAAAGAATAATTCAAGTACCAAACCTCTACCCCCTTCTAAGAGATTACGGCTTGAGGCACAGAGAGTTCTGAAGGAGAAAGTACAGGATATTGCAGATAAGAAGGGTATCAAATTGAGGTTCTGTAATCTGAAGGATTGTGAGAGTCACATTCACACATTAGATAGCCCTTGTGCCAGCACAAGAATGGAGATTGGATGGCCTCCTGGAGTGCCGTTCGTTCATCCTCACGATCTACCTAATAAGGCAAAAATTGGTTTTCTTGAAGCTTACGAGCCTGGTTGGACAGCTAGTCATGACGTTGAATTAAGTCTTACTGAACCTGGGCAAGTGGGTCAACAGTCAACCAACTGA MAGNGLPSLGRVKLTDIAPSEGVPSESFKLSVSTLSHSLAQYSAAIIQFPACDGALLRSGLDSARLYFHQRAACSSAELMQNNDSREWCRTSGYYVDAQMWQETYDYRPGLTPVEPSNGMELQPAGLPDIFALYGKASRIILDAISFYLNLRSSPFTEILDNVPLRSREISSSVLSVCCYGRPSFHGEHHHKLTAQEDSQLAMYASDHDHQIDKSLITLVKSDKAGLLIKDFNGRWILVDGDLGPQDAIVYPGLALYQATAGYVNPALLRTDVNNIQGSMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVDVQFQLPVPVDDFMQRSHSTDELFNRPNFQNFSFSTSQDGSIKMRRRKNNSSTKPLPPSKRLRLEAQRVLKEKVQDIADKKGIKLRFCNLKDCESHIHTLDSPCASTRMEIGWPPGVPFVHPHDLPNKAKIGFLEAYEPGWTASHDVELSLTEPGQVGQQSTN
BLAST of Lsi04G018800 vs. TrEMBL
Match: A0A061F8X2_THECC (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_032425 PE=4 SV=1) HSP 1 Score: 799.7 bits (2064), Expect = 2.0e-228 Identity = 387/475 (81.47%), Postives = 428/475 (90.11%), Query Frame = 1
BLAST of Lsi04G018800 vs. TrEMBL
Match: A0A061FH49_THECC (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_032425 PE=4 SV=1) HSP 1 Score: 799.7 bits (2064), Expect = 2.0e-228 Identity = 387/475 (81.47%), Postives = 428/475 (90.11%), Query Frame = 1
BLAST of Lsi04G018800 vs. TrEMBL
Match: D7SWX7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0027g00600 PE=4 SV=1) HSP 1 Score: 797.0 bits (2057), Expect = 1.3e-227 Identity = 385/475 (81.05%), Postives = 430/475 (90.53%), Query Frame = 1
BLAST of Lsi04G018800 vs. TrEMBL
Match: A0A0A0KZ26_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G608060 PE=4 SV=1) HSP 1 Score: 795.4 bits (2053), Expect = 3.7e-227 Identity = 386/394 (97.97%), Postives = 390/394 (98.98%), Query Frame = 1
BLAST of Lsi04G018800 vs. TrEMBL
Match: A0A0D2M686_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G036400 PE=4 SV=1) HSP 1 Score: 789.3 bits (2037), Expect = 2.7e-225 Identity = 381/476 (80.04%), Postives = 427/476 (89.71%), Query Frame = 1
BLAST of Lsi04G018800 vs. TAIR10
Match: AT3G12940.1 (AT3G12940.1 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 716.5 bits (1848), Expect = 1.1e-206 Identity = 351/476 (73.74%), Postives = 408/476 (85.71%), Query Frame = 1
BLAST of Lsi04G018800 vs. TAIR10
Match: AT3G19895.1 (AT3G19895.1 RING/U-box superfamily protein) HSP 1 Score: 158.7 bits (400), Expect = 8.9e-39 Identity = 117/336 (34.82%), Postives = 166/336 (49.40%), Query Frame = 1
BLAST of Lsi04G018800 vs. NCBI nr
Match: gi|449453784|ref|XP_004144636.1| (PREDICTED: uncharacterized protein LOC101216737 [Cucumis sativus]) HSP 1 Score: 945.3 bits (2442), Expect = 4.2e-272 Identity = 465/473 (98.31%), Postives = 469/473 (99.15%), Query Frame = 1
BLAST of Lsi04G018800 vs. NCBI nr
Match: gi|659130950|ref|XP_008465436.1| (PREDICTED: uncharacterized protein LOC103503048 isoform X1 [Cucumis melo]) HSP 1 Score: 941.0 bits (2431), Expect = 7.9e-271 Identity = 462/473 (97.67%), Postives = 469/473 (99.15%), Query Frame = 1
BLAST of Lsi04G018800 vs. NCBI nr
Match: gi|659130954|ref|XP_008465438.1| (PREDICTED: uncharacterized protein LOC103503048 isoform X2 [Cucumis melo]) HSP 1 Score: 941.0 bits (2431), Expect = 7.9e-271 Identity = 462/473 (97.67%), Postives = 469/473 (99.15%), Query Frame = 1
BLAST of Lsi04G018800 vs. NCBI nr
Match: gi|590611974|ref|XP_007022254.1| (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 2 [Theobroma cacao]) HSP 1 Score: 799.7 bits (2064), Expect = 2.8e-228 Identity = 387/475 (81.47%), Postives = 428/475 (90.11%), Query Frame = 1
BLAST of Lsi04G018800 vs. NCBI nr
Match: gi|590611970|ref|XP_007022253.1| (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein isoform 1 [Theobroma cacao]) HSP 1 Score: 799.7 bits (2064), Expect = 2.8e-228 Identity = 387/475 (81.47%), Postives = 428/475 (90.11%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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