Lsi04G018340 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G018340
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	NAC-domain containing protein 2
Location	chr04 : 25461530 .. 25463471 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGCAATGGAGCAAATTTTATCTGAACTGAATGGTGAGGAGTTAAACGAGCAGGGTTTGCCTCCAGGGTTCAGGTTTCACCCAACTGATGAGGAACTTATCACATTTTACTTAGCTTCAAAGGTTTTCAAAGGCAGCTTCTGCGGAGTTGAGATTGCTGAGGTTGACCTTAATCGATGTGAGCCATGGGAGCTTCCAGGTACGTACTTTATATACATACATCACGATTCTCATCATCTTATTCATGATCTCATGCACCATTCTCTAGAAAAAAAAAAAAAAAAAAAAAAAGGCTTCGCCTAGTTGGAGAAGAAATGGTGGGTTTTCAGTAAGAAAAATACTTAGATGTAGCCATGAGATCACTTAAAAACATGTCAAGTAGCCATGACTATACTTAATCATAATTAGTAAATTAGTAATATATGCAGTTTTCTGTGTGTTTGGTTATTTCTTCAGATGTTGCAAAGATGGGGGAAAGAGAATGGTACTTCTACAGTTTACGGGACCGGAAGTACCCAACAGGGTTAAGAACAAATAGGGCGACCGGAGCTGGTTACTGGAAAGCGACCGGAAAAGACAGGGAGGTTTACAGTGCATCAAATGGATCGTTACTTGGGATGAAGAAGACGCTGGTGTTTTACAAAGGGAGAGCTCCGCGTGGGGAAAAAACCAAGTGGGTCATGCATGAGTACCGCTTAGACGGCGATTTCTCTTACCGCCATGCCTGTAAGGTAATGCCAACAATAATGAACTCTCAAGTCTCACCCACCGCACGTGCATTCTCGCACCGTGCGAATCAAGCTATTAACCTACAATACTACTTAACCCCCCCCCCCCCCCCCCCCTTTTCTTTTTGTCCTCTTCCGAGTTGACTTATTTTATATTCCATAAAAGTACTTCTTCTTTCCGAAGCTACACTATTCCTTCTTCTATTATTTACTTTGGGGTAAGTTTTTGATGTGATACGATTGATTTAACCACTGCTAAGTTTATCTCTGGAAATGGTGCAATGTGCTGTAGTCCCTTATTAGCTTTTTTTTTTTTCCTGCAATCTCCATGCATATGACACACAGCCTTTTTTAAGTTAAAAGATTTAATTTAATGGAATGCCGACTGTTTATTGCCATGTTTAATTGTTGTTATGTATTTTGAAACTTCTCGTATGCAGGAAGAATGGGTTATTTGTAGAATATTTCACAAGAACGGGGAGAAGAAAAATCCAATGTTCCAGTGTCAGACTTATCTTCTGGAGTCTGCTTTATCATCGTCCACCACTTCCAACTCCTTGCCTCCATTGCTAGAGTCGACCCCAACAACAACAACAACAACACTAGTAGAGTGTCAATCTCAAGCCGCAATGCAGGCTTTCCAAAACCCTTTTCAGATTCAGCAGCCTCCTGAAAACGACCTGAAGAGGTTCATGAGCTCAGTGATGTCCCAATCCAACCTCCATTCCTCGAGCGAGCAGCTGCACAAATCCCCAATCTCAATCAACCCCTGTATTGTGAATGCTAACAACAATATGTTGTTGTATACTTCGTCGTCGTCGCCATCGATTCTCTTCAAGTCTCTCCTCTCACATCAAGATTCCACAGTAGTGCTAAAGCAGCAGCAGTGTGATCATGTCTTTAAACAGTTCAACAAAGCAGCGGAGGCCAGCTTTACAGCCCATAATTTCGAGCCCGCTGAGACAGAGGCCAACTCAAACTTCATGGATATCAAGAAAATGATGCAGCCAAATGTCCCTCCTTGTTCTTACCATCAACATCCCTTGTTTTTTGAAATGGAATGCAATTCACCACCAGCCGTGGCTGCCGACGTGTCTCTTCATGACATATCAACTTCAATCGCCTTCAACAGGCCTGCCTTTCAGACTATGTTAGATCCTCACATCAACATCCTCCATGCCCATGGAGAATCTTGGCCTTTAGATGCTTAA

mRNA sequence

ATGTTGGCAATGGAGCAAATTTTATCTGAACTGAATGGTGAGGAGTTAAACGAGCAGGGTTTGCCTCCAGGGTTCAGGTTTCACCCAACTGATGAGGAACTTATCACATTTTACTTAGCTTCAAAGGTTTTCAAAGGCAGCTTCTGCGGAGTTGAGATTGCTGAGGTTGACCTTAATCGATGTGAGCCATGGGAGCTTCCAGATGTTGCAAAGATGGGGGAAAGAGAATGGTACTTCTACAGTTTACGGGACCGGAAGTACCCAACAGGGTTAAGAACAAATAGGGCGACCGGAGCTGGTTACTGGAAAGCGACCGGAAAAGACAGGGAGGTTTACAGTGCATCAAATGGATCGTTACTTGGGATGAAGAAGACGCTGGTGTTTTACAAAGGGAGAGCTCCGCGTGGGGAAAAAACCAAGTGGGTCATGCATGAGTACCGCTTAGACGGCGATTTCTCTTACCGCCATGCCTGTAAGGAAGAATGGGTTATTTGTAGAATATTTCACAAGAACGGGGAGAAGAAAAATCCAATGTTCCAGTGTCAGACTTATCTTCTGGAGTCTGCTTTATCATCGTCCACCACTTCCAACTCCTTGCCTCCATTGCTAGAGTCGACCCCAACAACAACAACAACAACACTAGTAGAGTGTCAATCTCAAGCCGCAATGCAGGCTTTCCAAAACCCTTTTCAGATTCAGCAGCCTCCTGAAAACGACCTGAAGAGGTTCATGAGCTCAGTGATGTCCCAATCCAACCTCCATTCCTCGAGCGAGCAGCTGCACAAATCCCCAATCTCAATCAACCCCTGTATTGTGAATGCTAACAACAATATGTTGTTGTATACTTCGTCGTCGTCGCCATCGATTCTCTTCAAGTCTCTCCTCTCACATCAAGATTCCACAGTAGTGCTAAAGCAGCAGCAGTGTGATCATGTCTTTAAACAGTTCAACAAAGCAGCGGAGGCCAGCTTTACAGCCCATAATTTCGAGCCCGCTGAGACAGAGGCCAACTCAAACTTCATGGATATCAAGAAAATGATGCAGCCAAATGTCCCTCCTTGTTCTTACCATCAACATCCCTTGTTTTTTGAAATGGAATGCAATTCACCACCAGCCGTGGCTGCCGACGTGTCTCTTCATGACATATCAACTTCAATCGCCTTCAACAGGCCTGCCTTTCAGACTATGTTAGATCCTCACATCAACATCCTCCATGCCCATGGAGAATCTTGGCCTTTAGATGCTTAA

Coding sequence (CDS)

ATGTTGGCAATGGAGCAAATTTTATCTGAACTGAATGGTGAGGAGTTAAACGAGCAGGGTTTGCCTCCAGGGTTCAGGTTTCACCCAACTGATGAGGAACTTATCACATTTTACTTAGCTTCAAAGGTTTTCAAAGGCAGCTTCTGCGGAGTTGAGATTGCTGAGGTTGACCTTAATCGATGTGAGCCATGGGAGCTTCCAGATGTTGCAAAGATGGGGGAAAGAGAATGGTACTTCTACAGTTTACGGGACCGGAAGTACCCAACAGGGTTAAGAACAAATAGGGCGACCGGAGCTGGTTACTGGAAAGCGACCGGAAAAGACAGGGAGGTTTACAGTGCATCAAATGGATCGTTACTTGGGATGAAGAAGACGCTGGTGTTTTACAAAGGGAGAGCTCCGCGTGGGGAAAAAACCAAGTGGGTCATGCATGAGTACCGCTTAGACGGCGATTTCTCTTACCGCCATGCCTGTAAGGAAGAATGGGTTATTTGTAGAATATTTCACAAGAACGGGGAGAAGAAAAATCCAATGTTCCAGTGTCAGACTTATCTTCTGGAGTCTGCTTTATCATCGTCCACCACTTCCAACTCCTTGCCTCCATTGCTAGAGTCGACCCCAACAACAACAACAACAACACTAGTAGAGTGTCAATCTCAAGCCGCAATGCAGGCTTTCCAAAACCCTTTTCAGATTCAGCAGCCTCCTGAAAACGACCTGAAGAGGTTCATGAGCTCAGTGATGTCCCAATCCAACCTCCATTCCTCGAGCGAGCAGCTGCACAAATCCCCAATCTCAATCAACCCCTGTATTGTGAATGCTAACAACAATATGTTGTTGTATACTTCGTCGTCGTCGCCATCGATTCTCTTCAAGTCTCTCCTCTCACATCAAGATTCCACAGTAGTGCTAAAGCAGCAGCAGTGTGATCATGTCTTTAAACAGTTCAACAAAGCAGCGGAGGCCAGCTTTACAGCCCATAATTTCGAGCCCGCTGAGACAGAGGCCAACTCAAACTTCATGGATATCAAGAAAATGATGCAGCCAAATGTCCCTCCTTGTTCTTACCATCAACATCCCTTGTTTTTTGAAATGGAATGCAATTCACCACCAGCCGTGGCTGCCGACGTGTCTCTTCATGACATATCAACTTCAATCGCCTTCAACAGGCCTGCCTTTCAGACTATGTTAGATCCTCACATCAACATCCTCCATGCCCATGGAGAATCTTGGCCTTTAGATGCTTAA

Protein sequence

MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQCQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPPENDLKRFMSSVMSQSNLHSSSEQLHKSPISINPCIVNANNNMLLYTSSSSPSILFKSLLSHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPCSYHQHPLFFEMECNSPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGESWPLDA

Homology

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BLAST of Lsi04G018340 vs. Swiss-Prot
Match: NAC31_ARATH (Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.4e-84
Identity = 160/258 (62.02%), Postives = 190/258 (73.64%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLA+E +LSEL GEE NE+GLPPGFRFHPTDEELITFYLASK+F G   G+ I+EVDLNR
Sbjct: 2   MLAVEDVLSELAGEERNERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNR 61

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELP++AKMGEREWYFYSLRDRKYPTGLRTNRAT AGYWKATGKD+EV+S   G L+
Sbjct: 62  CEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLV 121

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNP--M 180
           GMKKTLVFYKGRAPRG KTKWVMHEYRL+ D S+RH CKEEWVICR+F+K G++KN   +
Sbjct: 122 GMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLI 181

Query: 181 FQCQTYLLESALSSSTTSN--SLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPP 240
               +YL   +LS++   +  +LP L+E +  T T                N F      
Sbjct: 182 HNQISYLHNHSLSTTHHHHHEALPLLIEPSNKTLTNFPSLLYDDPHQNYNNNNFLHGSSG 241

Query: 241 EN--DLKRFMSSVMSQSN 253
            N  +LK  ++ V+SQ N
Sbjct: 242 HNIDELKALINPVVSQLN 259

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BLAST of Lsi04G018340 vs. Swiss-Prot
Match: NAC98_ARATH (Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.3e-64
Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = 1


Query: 17  NEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGERE 76
           + Q LPPGFRFHPTDEELIT YL  KV  G F    IAEVDLN+CEPW+LP  AKMGE+E
Sbjct: 13  DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE 72

Query: 77  WYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRG 136
           WYF+SLRDRKYPTGLRTNRAT AGYWKATGKDRE++S+   +L+GMKKTLVFYKGRAP+G
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG 132

Query: 137 EKTKWVMHEYRLDGDFSYR---HACKEEWVICRIFHK 171
           EK+ WVMHEYRL+G FSY     + K+EWVI R+F K
Sbjct: 133 EKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK 169

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BLAST of Lsi04G018340 vs. Swiss-Prot
Match: NAC54_ARATH (Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 5.6e-63
Identity = 127/228 (55.70%), Postives = 157/228 (68.86%), Query Frame = 1


Query: 17  NEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGERE 76
           +E  +PPGFRFHPTDEELIT+YL  KV   +F    I++VDLN+ EPWELP+ AKMGE+E
Sbjct: 16  DESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKE 75

Query: 77  WYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRG 136
           WYF++LRDRKYPTGLRTNRAT AGYWKATGKDRE+ S+   SLLGMKKTLVFYKGRAP+G
Sbjct: 76  WYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKG 135

Query: 137 EKTKWVMHEYRLDGDFSYRH---ACKEEWVICRIFHKNGEKKNPMFQCQTYLLESALSSS 196
           EK+ WVMHEYRLDG FSY +   + K+EWV+C++  K+G     +   +T L+ S+ SS+
Sbjct: 136 EKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG-----VVSRETNLISSSSSSA 195

Query: 197 TTS--NSLPPLLESTPTTTTTTLVEC---QSQAAMQAFQNPFQIQQPP 237
            T   +S    +     T  T  V C    S A   A  + F    PP
Sbjct: 196 VTGEFSSAGSAIAPIINTFATEHVSCFSNNSAAHTDASFHTFLPAPPP 238

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BLAST of Lsi04G018340 vs. Swiss-Prot
Match: NC100_ARATH (NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 8.1e-62
Identity = 125/219 (57.08%), Postives = 150/219 (68.49%), Query Frame = 1


Query: 14  EELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMG 73
           +E  +  LPPGFRFHPTDEELIT YL  KV   SF    I EVDLN+ EPWELP +AKMG
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMG 68

Query: 74  EREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRA 133
           E+EWYF+ +RDRKYPTGLRTNRAT AGYWKATGKD+E+Y     SL+GMKKTLVFY+GRA
Sbjct: 69  EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRA 128

Query: 134 PRGEKTKWVMHEYRLDGDFSYRH---ACKEEWVICRIFHKN-GEKKNPMFQCQTYLLESA 193
           P+G+KT WVMHEYRL+G FS  +     K EWVICR+F K+ G KK P+    + +   +
Sbjct: 129 PKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPI---SSLIRIGS 188

Query: 194 LSSSTTSNSLPPLLESTP----TTTTTTLVECQSQAAMQ 225
           L +    + LP L +S+P    T T    V C S    Q
Sbjct: 189 LGTDFNPSLLPSLTDSSPYNDKTKTEPVYVPCFSNQTDQ 222

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BLAST of Lsi04G018340 vs. Swiss-Prot
Match: NAC79_ARATH (NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 1.8e-61
Identity = 142/288 (49.31%), Postives = 172/288 (59.72%), Query Frame = 1


Query: 14  EELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMG 73
           E+  +  LPPGFRFHPTDEELIT YL  KV    F    I EVDLN+ EPWELP  AK+G
Sbjct: 10  EDDEQMDLPPGFRFHPTDEELITHYLHKKVLDLGFSAKAIGEVDLNKAEPWELPYKAKIG 69

Query: 74  EREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRA 133
           E+EWYF+ +RDRKYPTGLRTNRAT AGYWKATGKD+E++     SL+GMKKTLVFY+GRA
Sbjct: 70  EKEWYFFCVRDRKYPTGLRTNRATQAGYWKATGKDKEIFRGK--SLVGMKKTLVFYRGRA 129

Query: 134 PRGEKTKWVMHEYRLDGDFSYRH---ACKEEWVICRIFHKN-GEKKNPMFQCQTYLLESA 193
           P+G+KT WVMHEYRLDG  S  +     K EWVICR+FHK  G KK P+    T +    
Sbjct: 130 PKGQKTNWVMHEYRLDGKLSAHNLPKTAKNEWVICRVFHKTAGGKKIPI---STLI---R 189

Query: 194 LSSSTTSNSLPPLLESTP----TTTTTTLVECQSQAA------MQAFQNPFQIQQPPEND 253
           + S  T +SLPPL +S+P    T T    V C S  A      +  F NP      P  D
Sbjct: 190 IGSYGTGSSLPPLTDSSPYNDKTKTEPVYVPCFSNQAETRGTILNCFSNPSLSSIQP--D 249

Query: 254 LKRFMSSVMSQS-NLHSSSEQLHKSPISINPCIVNANNNMLLYTSSSS 287
             + +     QS N+  SS  +     S+   ++  N      T S S
Sbjct: 250 FLQMIPLYQPQSLNISESSNPVLTQEQSVLQAMMENNRRQNFKTLSIS 287

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BLAST of Lsi04G018340 vs. TrEMBL
Match: A0A0A0L1E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664400 PE=4 SV=1)

HSP 1 Score: 739.6 bits (1908), Expect = 2.1e-210
Identity = 372/422 (88.15%), Postives = 386/422 (91.47%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           ML MEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR
Sbjct: 1   MLTMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL
Sbjct: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKN MFQ
Sbjct: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNSMFQ 180

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAM----QAFQNPFQIQQPP 240
           CQTYLLESALSSSTTSNSLPPLLE+ P   TTTLVECQSQAAM    QAFQNPFQI+QPP
Sbjct: 181 CQTYLLESALSSSTTSNSLPPLLETNP---TTTLVECQSQAAMQLQLQAFQNPFQIRQPP 240

Query: 241 ENDLKRFMSSVMSQSNLHSSSEQLHKSPISINPCIVNA--NNNMLLYTSSSSPSILFKSL 300
           ENDLKRFMSSVMSQSNL SSSEQLHKS ISINP I NA  NNN +LY  + SPSILFKSL
Sbjct: 241 ENDLKRFMSSVMSQSNLLSSSEQLHKSSISINPIITNAANNNNNMLY--APSPSILFKSL 300

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAE-ASFTAHNFEPAETEANSNFMDIKKMMQPNVPP 360
           LSHQDSTV+LKQQQ  H  +QFNKAA+ +SFT HNF+PAE EANSN MDIKKMM PN  P
Sbjct: 301 LSHQDSTVLLKQQQQQHQQQQFNKAADSSSFTTHNFDPAEAEANSNLMDIKKMMVPNASP 360

Query: 361 CSYHQHPLFFEMECNSPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGESWPL 416
           CSYHQHPLFFE ECNSPP + A VSLHD STSI+FNRPA+QT+LDPHINILHAHG+SWPL
Sbjct: 361 CSYHQHPLFFETECNSPPPLPAHVSLHDTSTSISFNRPAYQTLLDPHINILHAHGDSWPL 417

[Close]

BLAST of Lsi04G018340 vs. TrEMBL
Match: A0A061FGR2_THECC (NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=TCM_034835 PE=4 SV=1)

HSP 1 Score: 468.4 bits (1204), Expect = 9.1e-129
Identity = 266/424 (62.74%), Postives = 311/424 (73.35%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           ML++E++LSEL GEELNEQGLPPGFRFHPTDEELITFYLASKVF GSFCGVEIAEVDLNR
Sbjct: 38  MLSVEELLSELAGEELNEQGLPPGFRFHPTDEELITFYLASKVFNGSFCGVEIAEVDLNR 97

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS+G+LL
Sbjct: 98  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASSGALL 157

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFY+GRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHK GEKK  + Q
Sbjct: 158 GMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKTGEKKTALAQ 217

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPPENDL 240
            Q+++LE    SS+ ++SLPPLLE     T T  +E QSQ  MQA QN F I +  ENDL
Sbjct: 218 GQSFILE---VSSSPASSLPPLLE-----TPTPFLESQSQTPMQA-QNSFVIHR-QENDL 277

Query: 241 KRFMSSVMSQSNLHSSSEQLHKSPISINPCIVNA------NNNMLLYTSSSSPSILFKSL 300
           K  ++ V+SQ+ L  +     +   S NP  + +      + N    TS+ S S+LFKSL
Sbjct: 278 KSLINPVVSQTPLFPADGLQVQPSFSANPTTITSSTTNTTDKNAATDTSNPSASMLFKSL 337

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPC 360
           LSHQ+   +LK+Q    + KQ     EA+F+  +      +A+ N+MD    + PN  PC
Sbjct: 338 LSHQN--CILKEQAT--IPKQCK--TEANFSHFHL----PDASLNWMD---KIHPN--PC 397

Query: 361 SYHQHPLFFEMECN----SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGES 415
              Q+PLFFEM+C+    S    A D ++HD+STSIAFNR   Q MLDP I    A GES
Sbjct: 398 ---QNPLFFEMDCSVLGFSEGVTAGDATVHDMSTSIAFNRAGVQMMLDPPI---RAPGES 430

[Close]

BLAST of Lsi04G018340 vs. TrEMBL
Match: B9GPP5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s00730g PE=4 SV=1)

HSP 1 Score: 466.1 bits (1198), Expect = 4.5e-128
Identity = 256/425 (60.24%), Postives = 301/425 (70.82%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLAME++L EL  E++NEQGLPPGFRFHPTDEELITFYLASKVF GSFCGV+IAEVDLNR
Sbjct: 1   MLAMEELLCELTCEDINEQGLPPGFRFHPTDEELITFYLASKVFNGSFCGVDIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS G+LL
Sbjct: 61  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASTGALL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRH+CKEEWVICRIFHK GEKKN   Q
Sbjct: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHSCKEEWVICRIFHKKGEKKNVFLQ 180

Query: 181 C-QTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQ-AAMQAFQNPFQIQQPPEN 240
             Q Y L  A SS   S SLPPLLE+    + +   +CQS+   ++AFQN F I +  EN
Sbjct: 181 AGQGYHLMEA-SSPANSGSLPPLLEA----SASIFDQCQSKNTVVEAFQNAFLIHEHQEN 240

Query: 241 DLKRFMSSVMSQSN---LHSSSEQLHKSPISINPCIVNANNNMLLYTSSSSPSILFKSLL 300
           DLK  ++ ++SQSN   ++        + ISIN    + N N    T++ SPS+LFKS+L
Sbjct: 241 DLKSLLNPLVSQSNAMSINGFQPCFSPTSISINSTTTSTNKNTDTNTNNQSPSMLFKSIL 300

Query: 301 SHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPCS 360
           S+QD  +   ++Q   ++KQ N   EA+F+      A          + K++ PN     
Sbjct: 301 SYQDCAL---KEQSSTLYKQCN--TEANFSHFQLHDAHLGC------VDKIIHPN----P 360

Query: 361 YHQHPLFFEMECN------SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGE 415
           Y  +PLFFEM+C+      S  A AAD   HD+STSIAF+R   Q MLD  I +     E
Sbjct: 361 YQNNPLFFEMDCSSNILGFSESASAADTIAHDMSTSIAFSRAGLQMMLDTPIRL---PAE 402

[Close]

BLAST of Lsi04G018340 vs. TrEMBL
Match: B9R8S6_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1601970 PE=4 SV=1)

HSP 1 Score: 459.9 bits (1182), Expect = 3.2e-126
Identity = 262/425 (61.65%), Postives = 307/425 (72.24%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLAME++L EL GE+ NEQGLPPGFRFHPTDEELITFYLASKVF G+FCGVEIAEVDLNR
Sbjct: 1   MLAMEELLCELIGEDRNEQGLPPGFRFHPTDEELITFYLASKVFNGTFCGVEIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS+G+LL
Sbjct: 61  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASSGALL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFY+GRAPRGEKTKWVMHEYRLDGDFSYRH CKEEWVICRIF+K GEKKN + Q
Sbjct: 121 GMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHTCKEEWVICRIFNKTGEKKNALLQ 180

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPPENDL 240
            Q +LLE+  +S   S SLP LLE+      +TL+ECQSQA     QNPF IQ   ENDL
Sbjct: 181 GQRFLLEA--TSPPNSCSLPSLLEA-----PSTLMECQSQAGTDGLQNPFLIQH-QENDL 240

Query: 241 KR-FMSSVMSQ--SNLHSSSEQLHKSPISINPCIVNAN---NNMLLYTSSSSPSILFKSL 300
           K   +S ++SQ  + +  +  Q   S     P  ++ N   N  +   ++++PS+LFKSL
Sbjct: 241 KSLLLSPLLSQCHNTVSINGIQFQPSFSPTTPIAISTNTETNKNIDTNTNNNPSMLFKSL 300

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPC 360
           LSHQD T  LK+Q    V KQ     EA+F+         EAN N+M  K  +  +    
Sbjct: 301 LSHQDCT--LKEQ--SPVLKQCK--TEANFSHFQL----PEANLNWMMDK--IHHHHQHQ 360

Query: 361 SYHQHPLFFEMECN----SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGES 416
           S +Q+PL FEM+CN    +  A  AD++ H++STSIAFNR  FQ MLD  I       ES
Sbjct: 361 SPYQYPLSFEMDCNMLGITAAATDADITAHEMSTSIAFNRAGFQMMLDAPI---RHPAES 402

[Close]

BLAST of Lsi04G018340 vs. TrEMBL
Match: B9H5V7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27720g PE=4 SV=2)

HSP 1 Score: 444.1 bits (1141), Expect = 1.8e-121
Identity = 242/421 (57.48%), Postives = 287/421 (68.17%), Query Frame = 1


Query: 4   MEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEP 63
           ME++L EL+ E LN+QGLPPGFRFHPTDEELITFYLASKVF GSFCGVEIAEVDLNRCEP
Sbjct: 1   MEELLCELSSEGLNDQGLPPGFRFHPTDEELITFYLASKVFNGSFCGVEIAEVDLNRCEP 60

Query: 64  WELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMK 123
           WELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS G+LLGMK
Sbjct: 61  WELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASTGALLGMK 120

Query: 124 KTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQCQT 183
           KTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRH CK+EWVICRIFHK GEKK+   Q + 
Sbjct: 121 KTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHTCKDEWVICRIFHKKGEKKDVFLQAEQ 180

Query: 184 YLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQ-AAMQAFQNPFQIQQPPENDLKR 243
                 + S   S SLPPLL++    + +   +CQS+   + A QN F I +  ENDLK 
Sbjct: 181 GYHLWEVYSPANSGSLPPLLDA----SASLFDQCQSKNKVIDALQNAFLIPEHQENDLKS 240

Query: 244 FMSSVMSQS---NLHSSSEQLHKSPISINPCIVNANNNMLLYTSSSSPSILFKSLLSHQD 303
             + ++SQS   +++        +PISIN    + N N     ++ SPS+LFKS+LS+QD
Sbjct: 241 IPNPLVSQSHVLSINGLQPSFSPTPISINSTATSTNKNTNTDNNNQSPSMLFKSILSYQD 300

Query: 304 STVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPCSYHQH 363
            T+                  EASF+           ++ F  + K+  P+     Y  +
Sbjct: 301 CTL----------------KTEASFS----------HDATFGGVDKITHPH----PYLNN 360

Query: 364 PLFFEMECN------SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGESWPL 415
           PLFFEM+C+      S  A AAD  +HD+STSI F+R   Q MLD  I +    GESWPL
Sbjct: 361 PLFFEMDCSSNVLGFSGSASAADTIIHDMSTSIGFSRAGLQMMLDTPIRL---PGESWPL 384

[Close]

BLAST of Lsi04G018340 vs. TAIR10
Match: AT1G76420.1 (AT1G76420.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 313.5 bits (802), Expect = 1.9e-85
Identity = 160/258 (62.02%), Postives = 190/258 (73.64%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLA+E +LSEL GEE NE+GLPPGFRFHPTDEELITFYLASK+F G   G+ I+EVDLNR
Sbjct: 2   MLAVEDVLSELAGEERNERGLPPGFRFHPTDEELITFYLASKIFHGGLSGIHISEVDLNR 61

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELP++AKMGEREWYFYSLRDRKYPTGLRTNRAT AGYWKATGKD+EV+S   G L+
Sbjct: 62  CEPWELPEMAKMGEREWYFYSLRDRKYPTGLRTNRATTAGYWKATGKDKEVFSGGGGQLV 121

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNP--M 180
           GMKKTLVFYKGRAPRG KTKWVMHEYRL+ D S+RH CKEEWVICR+F+K G++KN   +
Sbjct: 122 GMKKTLVFYKGRAPRGLKTKWVMHEYRLENDHSHRHTCKEEWVICRVFNKTGDRKNVGLI 181

Query: 181 FQCQTYLLESALSSSTTSN--SLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPP 240
               +YL   +LS++   +  +LP L+E +  T T                N F      
Sbjct: 182 HNQISYLHNHSLSTTHHHHHEALPLLIEPSNKTLTNFPSLLYDDPHQNYNNNNFLHGSSG 241

Query: 241 EN--DLKRFMSSVMSQSN 253
            N  +LK  ++ V+SQ N
Sbjct: 242 HNIDELKALINPVVSQLN 259

[Close]

BLAST of Lsi04G018340 vs. TAIR10
Match: AT5G53950.1 (AT5G53950.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 248.4 bits (633), Expect = 7.5e-66
Identity = 113/157 (71.97%), Postives = 129/157 (82.17%), Query Frame = 1


Query: 17  NEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGERE 76
           + Q LPPGFRFHPTDEELIT YL  KV  G F    IAEVDLN+CEPW+LP  AKMGE+E
Sbjct: 13  DSQYLPPGFRFHPTDEELITHYLLRKVLDGCFSSRAIAEVDLNKCEPWQLPGRAKMGEKE 72

Query: 77  WYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRG 136
           WYF+SLRDRKYPTGLRTNRAT AGYWKATGKDRE++S+   +L+GMKKTLVFYKGRAP+G
Sbjct: 73  WYFFSLRDRKYPTGLRTNRATEAGYWKATGKDREIFSSKTCALVGMKKTLVFYKGRAPKG 132

Query: 137 EKTKWVMHEYRLDGDFSYR---HACKEEWVICRIFHK 171
           EK+ WVMHEYRL+G FSY     + K+EWVI R+F K
Sbjct: 133 EKSNWVMHEYRLEGKFSYHFISRSSKDEWVISRVFQK 169

[Close]

BLAST of Lsi04G018340 vs. TAIR10
Match: AT3G15170.1 (AT3G15170.1 NAC (No Apical Meristem) domain transcriptional regulator superfamily protein)

HSP 1 Score: 243.0 bits (619), Expect = 3.2e-64
Identity = 127/228 (55.70%), Postives = 157/228 (68.86%), Query Frame = 1


Query: 17  NEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGERE 76
           +E  +PPGFRFHPTDEELIT+YL  KV   +F    I++VDLN+ EPWELP+ AKMGE+E
Sbjct: 16  DESLMPPGFRFHPTDEELITYYLLKKVLDSNFSCAAISQVDLNKSEPWELPEKAKMGEKE 75

Query: 77  WYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRG 136
           WYF++LRDRKYPTGLRTNRAT AGYWKATGKDRE+ S+   SLLGMKKTLVFYKGRAP+G
Sbjct: 76  WYFFTLRDRKYPTGLRTNRATEAGYWKATGKDREIKSSKTKSLLGMKKTLVFYKGRAPKG 135

Query: 137 EKTKWVMHEYRLDGDFSYRH---ACKEEWVICRIFHKNGEKKNPMFQCQTYLLESALSSS 196
           EK+ WVMHEYRLDG FSY +   + K+EWV+C++  K+G     +   +T L+ S+ SS+
Sbjct: 136 EKSCWVMHEYRLDGKFSYHYISSSAKDEWVLCKVCLKSG-----VVSRETNLISSSSSSA 195

Query: 197 TTS--NSLPPLLESTPTTTTTTLVEC---QSQAAMQAFQNPFQIQQPP 237
            T   +S    +     T  T  V C    S A   A  + F    PP
Sbjct: 196 VTGEFSSAGSAIAPIINTFATEHVSCFSNNSAAHTDASFHTFLPAPPP 238

[Close]

BLAST of Lsi04G018340 vs. TAIR10
Match: AT2G24430.1 (AT2G24430.1 NAC domain containing protein 38)

HSP 1 Score: 241.1 bits (614), Expect = 1.2e-63
Identity = 109/181 (60.22%), Postives = 138/181 (76.24%), Query Frame = 1


Query: 18  EQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMGEREW 77
           E+ LPPGFRFHPTDEELI++YL +K+   +F G  IA+VDLN+ EPWELP+ AKMG +EW
Sbjct: 13  EEALPPGFRFHPTDEELISYYLVNKIADQNFTGKAIADVDLNKSEPWELPEKAKMGGKEW 72

Query: 78  YFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRAPRGE 137
           YF+SLRDRKYPTG+RTNRAT  GYWK TGKD+E+++++   L+GMKKTLVFY+GRAPRGE
Sbjct: 73  YFFSLRDRKYPTGVRTNRATNTGYWKTTGKDKEIFNSTTSELVGMKKTLVFYRGRAPRGE 132

Query: 138 KTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQCQTYLLESALSSSTTSN 197
           KT WVMHEYRL    SYR + ++EWV+CR+F K    K        Y+  S+ S+S   N
Sbjct: 133 KTCWVMHEYRLHSKSSYRTSKQDEWVVCRVFKKTEATKK-------YISTSSSSTSHHHN 186

Query: 198 S 199
           +
Sbjct: 193 N 186

[Close]

BLAST of Lsi04G018340 vs. TAIR10
Match: AT5G61430.1 (AT5G61430.1 NAC domain containing protein 100)

HSP 1 Score: 239.2 bits (609), Expect = 4.6e-63
Identity = 125/219 (57.08%), Postives = 150/219 (68.49%), Query Frame = 1


Query: 14  EELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNRCEPWELPDVAKMG 73
           +E  +  LPPGFRFHPTDEELIT YL  KV   SF    I EVDLN+ EPWELP +AKMG
Sbjct: 9   KEEEQMDLPPGFRFHPTDEELITHYLHKKVLDTSFSAKAIGEVDLNKSEPWELPWMAKMG 68

Query: 74  EREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLLGMKKTLVFYKGRA 133
           E+EWYF+ +RDRKYPTGLRTNRAT AGYWKATGKD+E+Y     SL+GMKKTLVFY+GRA
Sbjct: 69  EKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDKEIYRGK--SLVGMKKTLVFYRGRA 128

Query: 134 PRGEKTKWVMHEYRLDGDFSYRH---ACKEEWVICRIFHKN-GEKKNPMFQCQTYLLESA 193
           P+G+KT WVMHEYRL+G FS  +     K EWVICR+F K+ G KK P+    + +   +
Sbjct: 129 PKGQKTNWVMHEYRLEGKFSAHNLPKTAKNEWVICRVFQKSAGGKKIPI---SSLIRIGS 188

Query: 194 LSSSTTSNSLPPLLESTP----TTTTTTLVECQSQAAMQ 225
           L +    + LP L +S+P    T T    V C S    Q
Sbjct: 189 LGTDFNPSLLPSLTDSSPYNDKTKTEPVYVPCFSNQTDQ 222

[Close]

BLAST of Lsi04G018340 vs. NCBI nr
Match: gi|778697253|ref|XP_011654285.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus])

HSP 1 Score: 739.6 bits (1908), Expect = 3.0e-210
Identity = 372/422 (88.15%), Postives = 386/422 (91.47%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           ML MEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR
Sbjct: 1   MLTMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL
Sbjct: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKN MFQ
Sbjct: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNSMFQ 180

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAM----QAFQNPFQIQQPP 240
           CQTYLLESALSSSTTSNSLPPLLE+ P   TTTLVECQSQAAM    QAFQNPFQI+QPP
Sbjct: 181 CQTYLLESALSSSTTSNSLPPLLETNP---TTTLVECQSQAAMQLQLQAFQNPFQIRQPP 240

Query: 241 ENDLKRFMSSVMSQSNLHSSSEQLHKSPISINPCIVNA--NNNMLLYTSSSSPSILFKSL 300
           ENDLKRFMSSVMSQSNL SSSEQLHKS ISINP I NA  NNN +LY  + SPSILFKSL
Sbjct: 241 ENDLKRFMSSVMSQSNLLSSSEQLHKSSISINPIITNAANNNNNMLY--APSPSILFKSL 300

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAE-ASFTAHNFEPAETEANSNFMDIKKMMQPNVPP 360
           LSHQDSTV+LKQQQ  H  +QFNKAA+ +SFT HNF+PAE EANSN MDIKKMM PN  P
Sbjct: 301 LSHQDSTVLLKQQQQQHQQQQFNKAADSSSFTTHNFDPAEAEANSNLMDIKKMMVPNASP 360

Query: 361 CSYHQHPLFFEMECNSPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGESWPL 416
           CSYHQHPLFFE ECNSPP + A VSLHD STSI+FNRPA+QT+LDPHINILHAHG+SWPL
Sbjct: 361 CSYHQHPLFFETECNSPPPLPAHVSLHDTSTSISFNRPAYQTLLDPHINILHAHGDSWPL 417

[Close]

BLAST of Lsi04G018340 vs. NCBI nr
Match: gi|659105071|ref|XP_008453003.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo])

HSP 1 Score: 729.2 bits (1881), Expect = 4.1e-207
Identity = 372/426 (87.32%), Postives = 384/426 (90.14%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR
Sbjct: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL
Sbjct: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKN MFQ
Sbjct: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNSMFQ 180

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAM----QAFQNPFQIQQPP 240
           CQTYLLESALSSSTTSNSLPPLLE+ P   TTTLVECQSQAAM    QAFQNPFQI+QPP
Sbjct: 181 CQTYLLESALSSSTTSNSLPPLLETNP---TTTLVECQSQAAMQLQLQAFQNPFQIRQPP 240

Query: 241 ENDLKRFMSSVMSQSNLHSSSEQLHKSPISINPCIVN-ANNNMLLYTSSSSPSILFKSLL 300
           ENDLKRFMSSVMSQSNL SSSEQLHKSP SINP I N ANNN  +Y  + SPS LFKSLL
Sbjct: 241 ENDLKRFMSSVMSQSNLLSSSEQLHKSPTSINPIITNAANNNNNMY--APSPSTLFKSLL 300

Query: 301 SHQDSTVVLK-----QQQCDHVFKQFNKAAEA-SFTAHNFEPAETEANSNFMDIKKMMQP 360
           SHQDSTV+LK     QQQ     +QFNKAA++ SFT HNFEPAE EANSN MDIKKMM P
Sbjct: 301 SHQDSTVLLKQQQQQQQQQQQQQQQFNKAADSPSFTTHNFEPAEAEANSNLMDIKKMMVP 360

Query: 361 NVPPCSYHQHPLFFEMECNSPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGE 416
           N  PCSYHQHPLFFE ECNSPP + A VSLHDISTSI+FNRP++QTMLDP INILHAHGE
Sbjct: 361 NGSPCSYHQHPLFFETECNSPPTLPAHVSLHDISTSISFNRPSYQTMLDPRINILHAHGE 420

[Close]

BLAST of Lsi04G018340 vs. NCBI nr
Match: gi|590597702|ref|XP_007018687.1| (NAC domain transcriptional regulator superfamily protein [Theobroma cacao])

HSP 1 Score: 468.4 bits (1204), Expect = 1.3e-128
Identity = 266/424 (62.74%), Postives = 311/424 (73.35%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           ML++E++LSEL GEELNEQGLPPGFRFHPTDEELITFYLASKVF GSFCGVEIAEVDLNR
Sbjct: 38  MLSVEELLSELAGEELNEQGLPPGFRFHPTDEELITFYLASKVFNGSFCGVEIAEVDLNR 97

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS+G+LL
Sbjct: 98  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASSGALL 157

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFY+GRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHK GEKK  + Q
Sbjct: 158 GMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKTGEKKTALAQ 217

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPPENDL 240
            Q+++LE    SS+ ++SLPPLLE     T T  +E QSQ  MQA QN F I +  ENDL
Sbjct: 218 GQSFILE---VSSSPASSLPPLLE-----TPTPFLESQSQTPMQA-QNSFVIHR-QENDL 277

Query: 241 KRFMSSVMSQSNLHSSSEQLHKSPISINPCIVNA------NNNMLLYTSSSSPSILFKSL 300
           K  ++ V+SQ+ L  +     +   S NP  + +      + N    TS+ S S+LFKSL
Sbjct: 278 KSLINPVVSQTPLFPADGLQVQPSFSANPTTITSSTTNTTDKNAATDTSNPSASMLFKSL 337

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPC 360
           LSHQ+   +LK+Q    + KQ     EA+F+  +      +A+ N+MD    + PN  PC
Sbjct: 338 LSHQN--CILKEQAT--IPKQCK--TEANFSHFHL----PDASLNWMD---KIHPN--PC 397

Query: 361 SYHQHPLFFEMECN----SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGES 415
              Q+PLFFEM+C+    S    A D ++HD+STSIAFNR   Q MLDP I    A GES
Sbjct: 398 ---QNPLFFEMDCSVLGFSEGVTAGDATVHDMSTSIAFNRAGVQMMLDPPI---RAPGES 430

[Close]

BLAST of Lsi04G018340 vs. NCBI nr
Match: gi|224061845|ref|XP_002300627.1| (hypothetical protein POPTR_0002s00730g [Populus trichocarpa])

HSP 1 Score: 466.1 bits (1198), Expect = 6.5e-128
Identity = 256/425 (60.24%), Postives = 301/425 (70.82%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLAME++L EL  E++NEQGLPPGFRFHPTDEELITFYLASKVF GSFCGV+IAEVDLNR
Sbjct: 1   MLAMEELLCELTCEDINEQGLPPGFRFHPTDEELITFYLASKVFNGSFCGVDIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS G+LL
Sbjct: 61  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASTGALL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRH+CKEEWVICRIFHK GEKKN   Q
Sbjct: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHSCKEEWVICRIFHKKGEKKNVFLQ 180

Query: 181 C-QTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQ-AAMQAFQNPFQIQQPPEN 240
             Q Y L  A SS   S SLPPLLE+    + +   +CQS+   ++AFQN F I +  EN
Sbjct: 181 AGQGYHLMEA-SSPANSGSLPPLLEA----SASIFDQCQSKNTVVEAFQNAFLIHEHQEN 240

Query: 241 DLKRFMSSVMSQSN---LHSSSEQLHKSPISINPCIVNANNNMLLYTSSSSPSILFKSLL 300
           DLK  ++ ++SQSN   ++        + ISIN    + N N    T++ SPS+LFKS+L
Sbjct: 241 DLKSLLNPLVSQSNAMSINGFQPCFSPTSISINSTTTSTNKNTDTNTNNQSPSMLFKSIL 300

Query: 301 SHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPCS 360
           S+QD  +   ++Q   ++KQ N   EA+F+      A          + K++ PN     
Sbjct: 301 SYQDCAL---KEQSSTLYKQCN--TEANFSHFQLHDAHLGC------VDKIIHPN----P 360

Query: 361 YHQHPLFFEMECN------SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGE 415
           Y  +PLFFEM+C+      S  A AAD   HD+STSIAF+R   Q MLD  I +     E
Sbjct: 361 YQNNPLFFEMDCSSNILGFSESASAADTIAHDMSTSIAFSRAGLQMMLDTPIRL---PAE 402

[Close]

BLAST of Lsi04G018340 vs. NCBI nr
Match: gi|255539308|ref|XP_002510719.1| (PREDICTED: protein CUP-SHAPED COTYLEDON 3 [Ricinus communis])

HSP 1 Score: 459.9 bits (1182), Expect = 4.7e-126
Identity = 262/425 (61.65%), Postives = 307/425 (72.24%), Query Frame = 1


Query: 1   MLAMEQILSELNGEELNEQGLPPGFRFHPTDEELITFYLASKVFKGSFCGVEIAEVDLNR 60
           MLAME++L EL GE+ NEQGLPPGFRFHPTDEELITFYLASKVF G+FCGVEIAEVDLNR
Sbjct: 1   MLAMEELLCELIGEDRNEQGLPPGFRFHPTDEELITFYLASKVFNGTFCGVEIAEVDLNR 60

Query: 61  CEPWELPDVAKMGEREWYFYSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASNGSLL 120
           CEPWELPDVAKMGEREWYF+SLRDRKYPTGLRTNRATGAGYWKATGKDREVYSAS+G+LL
Sbjct: 61  CEPWELPDVAKMGEREWYFFSLRDRKYPTGLRTNRATGAGYWKATGKDREVYSASSGALL 120

Query: 121 GMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSYRHACKEEWVICRIFHKNGEKKNPMFQ 180
           GMKKTLVFY+GRAPRGEKTKWVMHEYRLDGDFSYRH CKEEWVICRIF+K GEKKN + Q
Sbjct: 121 GMKKTLVFYRGRAPRGEKTKWVMHEYRLDGDFSYRHTCKEEWVICRIFNKTGEKKNALLQ 180

Query: 181 CQTYLLESALSSSTTSNSLPPLLESTPTTTTTTLVECQSQAAMQAFQNPFQIQQPPENDL 240
            Q +LLE+  +S   S SLP LLE+      +TL+ECQSQA     QNPF IQ   ENDL
Sbjct: 181 GQRFLLEA--TSPPNSCSLPSLLEA-----PSTLMECQSQAGTDGLQNPFLIQH-QENDL 240

Query: 241 KR-FMSSVMSQ--SNLHSSSEQLHKSPISINPCIVNAN---NNMLLYTSSSSPSILFKSL 300
           K   +S ++SQ  + +  +  Q   S     P  ++ N   N  +   ++++PS+LFKSL
Sbjct: 241 KSLLLSPLLSQCHNTVSINGIQFQPSFSPTTPIAISTNTETNKNIDTNTNNNPSMLFKSL 300

Query: 301 LSHQDSTVVLKQQQCDHVFKQFNKAAEASFTAHNFEPAETEANSNFMDIKKMMQPNVPPC 360
           LSHQD T  LK+Q    V KQ     EA+F+         EAN N+M  K  +  +    
Sbjct: 301 LSHQDCT--LKEQ--SPVLKQCK--TEANFSHFQL----PEANLNWMMDK--IHHHHQHQ 360

Query: 361 SYHQHPLFFEMECN----SPPAVAADVSLHDISTSIAFNRPAFQTMLDPHINILHAHGES 416
           S +Q+PL FEM+CN    +  A  AD++ H++STSIAFNR  FQ MLD  I       ES
Sbjct: 361 SPYQYPLSFEMDCNMLGITAAATDADITAHEMSTSIAFNRAGFQMMLDAPI---RHPAES 402

The following BLAST results are available for this feature:

BLAST of Lsi04G018340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
NAC31_ARATH	3.4e-84	62.02	Protein CUP-SHAPED COTYLEDON 3 OS=Arabidopsis thaliana GN=NAC031 PE=1 SV=1	[more]
NAC98_ARATH	1.3e-64	71.97	Protein CUP-SHAPED COTYLEDON 2 OS=Arabidopsis thaliana GN=NAC098 PE=1 SV=1	[more]
NAC54_ARATH	5.6e-63	55.70	Protein CUP-SHAPED COTYLEDON 1 OS=Arabidopsis thaliana GN=NAC054 PE=1 SV=1	[more]
NC100_ARATH	8.1e-62	57.08	NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1	[more]
NAC79_ARATH	1.8e-61	49.31	NAC domain-containing protein 79 OS=Arabidopsis thaliana GN=NAC079 PE=2 SV=1	[more]

BLAST of Lsi04G018340 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L1E7_CUCSA	2.1e-210	88.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G664400 PE=4 SV=1	[more]
A0A061FGR2_THECC	9.1e-129	62.74	NAC domain transcriptional regulator superfamily protein OS=Theobroma cacao GN=T...	[more]
B9GPP5_POPTR	4.5e-128	60.24	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0002s00730g PE=4 SV=1	[more]
B9R8S6_RICCO	3.2e-126	61.65	Transcription factor, putative OS=Ricinus communis GN=RCOM_1601970 PE=4 SV=1	[more]
B9H5V7_POPTR	1.8e-121	57.48	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s27720g PE=4 SV=2	[more]

BLAST of Lsi04G018340 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G76420.1	1.9e-85	62.02	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT5G53950.1	7.5e-66	71.97	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT3G15170.1	3.2e-64	55.70	NAC (No Apical Meristem) domain transcriptional regulator superfamil...	[more]
AT2G24430.1	1.2e-63	60.22	NAC domain containing protein 38	[more]
AT5G61430.1	4.6e-63	57.08	NAC domain containing protein 100	[more]

BLAST of Lsi04G018340 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778697253\|ref\|XP_011654285.1\|	3.0e-210	88.15	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis sativus]	[more]
gi\|659105071\|ref\|XP_008453003.1\|	4.1e-207	87.32	PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Cucumis melo]	[more]
gi\|590597702\|ref\|XP_007018687.1\|	1.3e-128	62.74	NAC domain transcriptional regulator superfamily protein [Theobroma cacao]	[more]
gi\|224061845\|ref\|XP_002300627.1\|	6.5e-128	60.24	hypothetical protein POPTR_0002s00730g [Populus trichocarpa]	[more]
gi\|255539308\|ref\|XP_002510719.1\|	4.7e-126	61.65	PREDICTED: protein CUP-SHAPED COTYLEDON 3 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003441	NAC-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0009855	determination of bilateral symmetry
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0010014	meristem initiation
biological_process	GO:0010073	meristem maintenance
biological_process	GO:0010199	organ boundary specification between lateral organs and the meristem
biological_process	GO:0048513	animal organ development
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G018340.1	Lsi04G018340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003441	NAC domain	PFAM	PF02365	NAM	coord: 22..148 score: 1.6
IPR003441	NAC domain	PROFILE	PS51005	NAC	coord: 21..170 score: 59
IPR003441	NAC domain	unknown	SSF101941	NAC domain	coord: 16..171 score: 4.71
None	No IPR available	PANTHER	PTHR31744	FAMILY NOT NAMED	coord: 4..409 score: 1.1E
None	No IPR available	PANTHER	PTHR31744:SF17	PROTEIN CUP-SHAPED COTYLEDON 3	coord: 4..409 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G018340	Csa4G664400	Cucumber (Chinese Long) v2	culsiB284
Lsi04G018340	CSPI04G27200	Wild cucumber (PI 183967)	cpilsiB284
Lsi04G018340	Cucsa.272370	Cucumber (Gy14) v1	cgylsiB436
Lsi04G018340	CmaCh01G020350	Cucurbita maxima (Rimu)	cmalsiB424
Lsi04G018340	CmoCh01G020920	Cucurbita moschata (Rifu)	cmolsiB412
Lsi04G018340	Cla023471	Watermelon (97103) v1	lsiwmB335
Lsi04G018340	MELO3C017052	Melon (DHL92) v3.5.1	lsimeB323
Lsi04G018340	ClCG11G018980	Watermelon (Charleston Gray)	lsiwcgB261
Lsi04G018340	Cla97C11G225100	Watermelon (97103) v2	lsiwmbB268
Lsi04G018340	Bhi09G002361	Wax gourd	lsiwgoB403
Lsi04G018340	Cp4.1LG02g08680	Cucurbita pepo (Zucchini)	cpelsiB462
Lsi04G018340	CsGy4G025500	Cucumber (Gy14) v2	cgyblsiB264
Lsi04G018340	Carg21351	Silver-seed gourd	carlsiB324
Lsi04G018340	CsaV3_4G037580	Cucumber (Chinese Long) v3	cuclsiB305

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G018340	Bottle gourd (USVL1VR-Ls)	lsilsiB054
Lsi04G018340	Melon (DHL92) v3.6.1	lsimedB339