Lsi04G013210 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G013210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionStem-specific TSJT1
Locationchr04 : 20997635 .. 20999605 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGATAAGGCCACATTGAAAAACGAGAACCTTATCCCAACCCATCCCACAAAATTCCACGCCCACAATAATTACACAACATTGCCATACCATACTTTGCCTTCTTTCTTCTTTTAGATACTTGTTTTGTTTTCATATATATAAGGCAGGCTTTGGTTAAGCTTCTCTCTCCCACTATCTATTTTGATGAACCCAGTGAGTACCATTTCTGCAAAATGTTAGCCATTTTCCACAAAGCTTTCGCCCACCCACCTGAGGAACTTAACAGCCCTGCCTCTTCCACTGCCTCTAAGCCCCCTAAGCTTCCTCAAGAAACACTCAATGACTTTCTTTCCCGTCATCCTCACAACACTTTCTCTGTAAACTTCGGCCAAGCTGCTGTTCTTGCTTATGTTTCTCCCCATCGACCCTTCTCTATCCAGCAAAGGTAATTTCAAGGATGGATTACGGTAAAATTTAATCTTTTAAATACTCCCTTTTATCACTGATCATACTAGTTGATGGGTTTATGGTTAAATTGATTAATTCCTCTGTGGGGTTGATTTTTGGGTGAATTTGCAGGCTGTTCTGTGGGTTTGATGACATATACTGTCTATTCTTGGGAAGTTTAAACAATCTATGTGCACTGAATAAGCAATACGGTCTATCAAAAGGCTCAAATGAGGCTATGTTTTTGATTGAGGCGTATAGGACTCTTAGGGACAGAGGTCCTTATCCAGCTGATCAGGTCCTTAAGGAGCTTGATGGCAGCTTTGCCTTTGTTGTTTATGATAGCAGGGCTGGTGCTGTTTTTGCTGCCTTGGTATACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATCTTATTTCCTCCTCTTAGATGTGGCAATTTGACATTGGTAAGGTTTTGGCAAAAGATTAGACGTCTGAAAAGTACAAAGAAGTGATGAGTTTCTTGTAGGATAATAAGACTTGTTTGAATGGTAGAAAGCTTCGAAAGAGTGGTTTCCGTAAGTGGGGTCGAGGGAAATAGATTTGTGGGTCGTGGTGTTTCTTAGAATTGGGTTATTTTTTAAAAAAATTATAAGGTTCACTTCATGTGGGTGATAATAAAACAGGGTGCTGATGGGGGAGTGAAGCTCTATTGGGGAATTGCAGCAGATGGGTCAGTGGTGATATCAGACGATGTGGATGTCATCAAAGAAGGCTGTGCTAAATCATATGCTCCTTTTCCAACAGGTAATCCACTCTGATCCACAAGGAAAATCACACACATCTGATCTGCAAGTGTTTAAATGGTGAATTTGTTGAATTCACCGTTGAAAAGGCACGTGCAAATCAGATGAGATTTCCCACTAATCTAACAACAATGATGCAATTTTGATTGATTGACATGTTTGGAAACATTGTGTAATTGAGTAATAAACTTTTGAATGAATGAATGAATGAGCAGGATGCATGTTCCATAGTGAAGGGGGTCTAATGAGTTTTGAGCATCCAATGAACAAGATGAAAGCAATGCCTAGAATTGACAGTGAAGGAGCCATGTGTGGAGCTAACTTCAAGGTTGATGTGTACACAAGAGTCAACAGCATTCCAAGGAGAGGCAGTGAAGCTAATTGGGCTGAATGGGACACAAACTAGACAGACATATACAATTCTCTCTTCTGCGTGTCCTTCTGCTGTTGCTGTTTTCACAATTTAGCTCTTCTACGTCCTCTAACATCTCTTTCTCAGCTCCAATGGCTTGTAATTATTTTAAATAATAAATTTTTTTCTTTCCCTTCTTACTACTACATATATGTAAATAAACAAATAAACTCATAATTTCGATAATTTGAGAGAAAACACATCATTTCATTGCAAAGAAAAATATATCAAACACCTTGCCTGCACTACAACATTTCTCCGTTTTCTTCCTGGAATTATGTGTTCCTTGTTGAATAGAGAACTCAAAATATTTC

mRNA sequence

TGAGAGAGAGAGAGACAGAGAGAGAGAGAGAGAGATAAGGCCACATTGAAAAACGAGAACCTTATCCCAACCCATCCCACAAAATTCCACGCCCACAATAATTACACAACATTGCCATACCATACTTTGCCTTCTTTCTTCTTTTAGATACTTGTTTTGTTTTCATATATATAAGGCAGGCTTTGGTTAAGCTTCTCTCTCCCACTATCTATTTTGATGAACCCAGTGAGTACCATTTCTGCAAAATGTTAGCCATTTTCCACAAAGCTTTCGCCCACCCACCTGAGGAACTTAACAGCCCTGCCTCTTCCACTGCCTCTAAGCCCCCTAAGCTTCCTCAAGAAACACTCAATGACTTTCTTTCCCGTCATCCTCACAACACTTTCTCTGTAAACTTCGGCCAAGCTGCTGTTCTTGCTTATGTTTCTCCCCATCGACCCTTCTCTATCCAGCAAAGGCTGTTCTGTGGGTTTGATGACATATACTGTCTATTCTTGGGAAGTTTAAACAATCTATGTGCACTGAATAAGCAATACGGTCTATCAAAAGGCTCAAATGAGGCTATGTTTTTGATTGAGGCGTATAGGACTCTTAGGGACAGAGGTCCTTATCCAGCTGATCAGGTCCTTAAGGAGCTTGATGGCAGCTTTGCCTTTGTTGTTTATGATAGCAGGGCTGGTGCTGTTTTTGCTGCCTTGGTTCACTTCATGTGGGTGATAATAAAACAGGGTGCTGATGGGGGAGTGAAGCTCTATTGGGGAATTGCAGCAGATGGGTCAGTGGTGATATCAGACGATGTGGATGTCATCAAAGAAGGCTGTGCTAAATCATATGCTCCTTTTCCAACAGGATGCATGTTCCATAGTGAAGGGGGTCTAATGAGTTTTGAGCATCCAATGAACAAGATGAAAGCAATGCCTAGAATTGACAGTGAAGGAGCCATGTGTGGAGCTAACTTCAAGGTTGATGTGTACACAAGAGTCAACAGCATTCCAAGGAGAGGCAGTGAAGCTAATTGGGCTGAATGGGACACAAACTAGACAGACATATACAATTCTCTCTTCTGCGTGTCCTTCTGCTGTTGCTGTTTTCACAATTTAGCTCTTCTACGTCCTCTAACATCTCTTTCTCAGCTCCAATGGCTTGTAATTATTTTAAATAATAAATTTTTTTCTTTCCCTTCTTACTACTACATATATGTAAATAAACAAATAAACTCATAATTTCGATAATTTGAGAGAAAACACATCATTTCATTGCAAAGAAAAATATATCAAACACCTTGCCTGCACTACAACATTTCTCCGTTTTCTTCCTGGAATTATGTGTTCCTTGTTGAATAGAGAACTCAAAATATTTC

Coding sequence (CDS)

ATGTTAGCCATTTTCCACAAAGCTTTCGCCCACCCACCTGAGGAACTTAACAGCCCTGCCTCTTCCACTGCCTCTAAGCCCCCTAAGCTTCCTCAAGAAACACTCAATGACTTTCTTTCCCGTCATCCTCACAACACTTTCTCTGTAAACTTCGGCCAAGCTGCTGTTCTTGCTTATGTTTCTCCCCATCGACCCTTCTCTATCCAGCAAAGGCTGTTCTGTGGGTTTGATGACATATACTGTCTATTCTTGGGAAGTTTAAACAATCTATGTGCACTGAATAAGCAATACGGTCTATCAAAAGGCTCAAATGAGGCTATGTTTTTGATTGAGGCGTATAGGACTCTTAGGGACAGAGGTCCTTATCCAGCTGATCAGGTCCTTAAGGAGCTTGATGGCAGCTTTGCCTTTGTTGTTTATGATAGCAGGGCTGGTGCTGTTTTTGCTGCCTTGGTTCACTTCATGTGGGTGATAATAAAACAGGGTGCTGATGGGGGAGTGAAGCTCTATTGGGGAATTGCAGCAGATGGGTCAGTGGTGATATCAGACGATGTGGATGTCATCAAAGAAGGCTGTGCTAAATCATATGCTCCTTTTCCAACAGGATGCATGTTCCATAGTGAAGGGGGTCTAATGAGTTTTGAGCATCCAATGAACAAGATGAAAGCAATGCCTAGAATTGACAGTGAAGGAGCCATGTGTGGAGCTAACTTCAAGGTTGATGTGTACACAAGAGTCAACAGCATTCCAAGGAGAGGCAGTGAAGCTAATTGGGCTGAATGGGACACAAACTAG

Protein sequence

MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYVSPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRGPYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVVISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKVDVYTRVNSIPRRGSEANWAEWDTN
Homology
[Close]
BLAST of Lsi04G013210 vs. Swiss-Prot
Match: TSJT1_TOBAC (Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 7.8e-26
Identity = 60/150 (40.00%), Postives = 87/150 (58.00%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLA+F ++   PP EL+ P +    K  K  +E    F +    +TF   F    +    
Sbjct: 1   MLAVFEQSIGRPPPELSLPQAGIQKKEAKTREEIAESFKTWKQDSTFYHLFNGNFMAFSH 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
               P  +Q R     DD++C+F G+L+N   L K YGLS+ + EAM ++EAY+ LRDR 
Sbjct: 61  GNENP--LQPRSIVVMDDVFCIFSGALDNTFDLRKHYGLSRQATEAMIMVEAYKVLRDRA 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAA 151
           PYP DQV+KEL+G FAF+++DS+A  +F A
Sbjct: 121 PYPPDQVIKELEGKFAFILFDSKASTLFLA 148

[Close]
BLAST of Lsi04G013210 vs. TrEMBL
Match: A0A0A0L069_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638320 PE=4 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 3.5e-134
Identity = 237/264 (89.77%), Postives = 242/264 (91.67%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+ FAHPPEEL SPAS + SK PKLPQETLNDF+SRHP NTFS+NFGQAAVLAYV
Sbjct: 1   MLAIFHQTFAHPPEELKSPASFSGSKAPKLPQETLNDFISRHPQNTFSINFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           SP     + QRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  SPQSFSLVHQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQVLKELDGSFAFVVYDSRAGAVFAAL          GADGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAAL----------GADGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV
Sbjct: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWDTN 265
           DVYTRVNSIPRRGSEANWAEWDTN
Sbjct: 241 DVYTRVNSIPRRGSEANWAEWDTN 254

[Close]
BLAST of Lsi04G013210 vs. TrEMBL
Match: A0A151SR83_CAJCA (Stem-specific protein TSJT1 OS=Cajanus cajan GN=KK1_003554 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 4.0e-122
Identity = 212/262 (80.92%), Postives = 234/262 (89.31%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFHKAFAHPPEELNSPAS   SK PK+PQETLNDFLS HPHNT S++FG AAVLAYV
Sbjct: 1   MLAIFHKAFAHPPEELNSPASYKGSKKPKVPQETLNDFLSHHPHNTCSMSFGHAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P +PFSI QRLFCG DDIYCLFLGSLNNL  LNKQYGLSK ++EAMF+IEAY+TLRDRG
Sbjct: 61  RPDQPFSIHQRLFCGVDDIYCLFLGSLNNLSLLNKQYGLSKNTDEAMFVIEAYKTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K+LDGSFAFVVYDS+ G+VFAAL          G+DGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVVKDLDGSFAFVVYDSKIGSVFAAL----------GSDGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD++VIKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNK+KAMPR+DSEGAMCGANFKV
Sbjct: 181 ISDDLEVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKLKAMPRVDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWD 263
           D ++RVNSIPR GS++NW EWD
Sbjct: 241 DKFSRVNSIPRVGSQSNWMEWD 252

[Close]
BLAST of Lsi04G013210 vs. TrEMBL
Match: W9RJH0_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025667 PE=4 SV=1)

HSP 1 Score: 444.9 bits (1143), Expect = 6.9e-122
Identity = 213/261 (81.61%), Postives = 232/261 (88.89%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+AFAHPPEELNSPAS   SK PKLPQETL +FLS HPHNTFS++FGQ+AVLAYV
Sbjct: 1   MLAIFHEAFAHPPEELNSPASYNGSKRPKLPQETLQEFLSHHPHNTFSMSFGQSAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P  PFS  QRLFCGF+D YCLFLG+LNNLC LNKQYGL+KG+NEAMF+IEAYRTLRDRG
Sbjct: 61  RPDNPFSKHQRLFCGFEDTYCLFLGTLNNLCLLNKQYGLTKGTNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K L+GSFAFVVYDS+AG+VFAAL          G+DGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVIKGLEGSFAFVVYDSKAGSVFAAL----------GSDGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD++VIKEGCAKS+APFPTG MFHSEGGLMSFEHPMNK+KAMPRIDSEGAMCGANF V
Sbjct: 181 ISDDLEVIKEGCAKSFAPFPTGFMFHSEGGLMSFEHPMNKVKAMPRIDSEGAMCGANFNV 240

Query: 241 DVYTRVNSIPRRGSEANWAEW 262
           D YTRVNSIPR GSE NWAEW
Sbjct: 241 DKYTRVNSIPRVGSETNWAEW 251

[Close]
BLAST of Lsi04G013210 vs. TrEMBL
Match: Q93V62_ARATH (AT4g27450/F27G19_50 OS=Arabidopsis thaliana GN=At4g27450 PE=1 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.2e-121
Identity = 212/259 (81.85%), Postives = 232/259 (89.58%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+AFAHPPEELNSPAS   SK PKLP+ETLNDFL R+P NTFS++FGQAAVLAYV
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETLNDFLLRYPLNTFSMSFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P   FSI QRLFCGFDDIYCLF GSLNNLC LNKQYGL+K +NEAMF+IEAYRTLRDRG
Sbjct: 61  RPSASFSIHQRLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKTTNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K+LDGSF+FVVYDS+AG+VF AL          G+DGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVVKDLDGSFSFVVYDSKAGSVFTAL----------GSDGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD+DVIKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNK+KAMPR+DSEG +CGANFKV
Sbjct: 181 ISDDLDVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWA 260
           DVY RVNSIPRRGSEANW+
Sbjct: 241 DVYNRVNSIPRRGSEANWS 249

[Close]
BLAST of Lsi04G013210 vs. TrEMBL
Match: D7MEF5_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_913794 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.2e-121
Identity = 212/259 (81.85%), Postives = 232/259 (89.58%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+AFAHPPEELNSPAS   SK PKLP+ETLNDFL R+P NTFS++FGQAAVLAYV
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETLNDFLLRYPLNTFSMSFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P   FSI QRLFCGFDDIYCLF GSLNNLC LNKQYGL+K +NEAMF+IEAYRTLRDRG
Sbjct: 61  RPSASFSIHQRLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKTTNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K+LDGSF+FVVYDS+AG+VF AL          G+DGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVVKDLDGSFSFVVYDSKAGSVFTAL----------GSDGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD+DVIKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNK+KAMPR+DSEG +CGANFKV
Sbjct: 181 ISDDLDVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWA 260
           DVY RVNSIPRRGSEANW+
Sbjct: 241 DVYNRVNSIPRRGSEANWS 249

[Close]
BLAST of Lsi04G013210 vs. TAIR10
Match: AT4G27450.1 (AT4G27450.1 Aluminium induced protein with YGL and LRDR motifs)

HSP 1 Score: 444.1 bits (1141), Expect = 5.9e-125
Identity = 212/259 (81.85%), Postives = 232/259 (89.58%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+AFAHPPEELNSPAS   SK PKLP+ETLNDFL R+P NTFS++FGQAAVLAYV
Sbjct: 1   MLAIFHEAFAHPPEELNSPASEKCSKQPKLPEETLNDFLLRYPLNTFSMSFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P   FSI QRLFCGFDDIYCLF GSLNNLC LNKQYGL+K +NEAMF+IEAYRTLRDRG
Sbjct: 61  RPSASFSIHQRLFCGFDDIYCLFFGSLNNLCQLNKQYGLTKTTNEAMFVIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K+LDGSF+FVVYDS+AG+VF AL          G+DGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVVKDLDGSFSFVVYDSKAGSVFTAL----------GSDGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD+DVIKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNK+KAMPR+DSEG +CGANFKV
Sbjct: 181 ISDDLDVIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKIKAMPRVDSEGVLCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWA 260
           DVY RVNSIPRRGSEANW+
Sbjct: 241 DVYNRVNSIPRRGSEANWS 249

[Close]
BLAST of Lsi04G013210 vs. TAIR10
Match: AT3G15450.1 (AT3G15450.1 Aluminium induced protein with YGL and LRDR motifs)

HSP 1 Score: 376.7 bits (966), Expect = 1.2e-104
Identity = 182/260 (70.00%), Postives = 212/260 (81.54%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIF KAFAHPPEELNSPAS  + K PKLP ETL+DFLS H +N FS+NFG +AVLAY 
Sbjct: 1   MLAIFQKAFAHPPEELNSPASHFSGKTPKLPGETLSDFLSHHQNNAFSMNFGDSAVLAYA 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLS-KGSNEAMFLIEAYRTLRDR 120
              +  S++QRLFCG D IYC+FLG LNNLC LN+QYGLS K SNEAMF+IEAYRTLRDR
Sbjct: 61  --RQETSLRQRLFCGLDGIYCMFLGRLNNLCTLNRQYGLSGKNSNEAMFVIEAYRTLRDR 120

Query: 121 GPYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSV 180
           GPYPADQVL+ L+GSFAFVVYD++  +VF+AL           +DGG  LYWGI+ DGSV
Sbjct: 121 GPYPADQVLRGLEGSFAFVVYDTQTSSVFSAL----------SSDGGESLYWGISGDGSV 180

Query: 181 VISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFK 240
           V+SDD+ +IK+GCAKS+APFP GCMFHSE GL SF+HP N MKAMPRIDSEG +CGA+FK
Sbjct: 181 VMSDDIQIIKQGCAKSFAPFPNGCMFHSETGLKSFDHPTNMMKAMPRIDSEGVLCGASFK 240

Query: 241 VDVYTRVNSIPRRGSEANWA 260
           VD  +++NSIPRRGSEANWA
Sbjct: 241 VDACSKINSIPRRGSEANWA 248

[Close]
BLAST of Lsi04G013210 vs. TAIR10
Match: AT5G43830.1 (AT5G43830.1 Aluminium induced protein with YGL and LRDR motifs)

HSP 1 Score: 236.5 bits (602), Expect = 1.9e-62
Identity = 126/261 (48.28%), Postives = 165/261 (63.22%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLA+F K  A+ PE L SP SS ++   K        F S +P N+ ++NFG +  +AY 
Sbjct: 1   MLAVFEKTVANSPEALQSPHSSESAFALK-DGSLATHFASVNP-NSVTLNFGSSGFVAY- 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           S   P     RLF   DDI+CLF G + NL  L +QYGL+K +NEA+ +IEAYRTLRDRG
Sbjct: 61  SLDNPDPRVPRLFAVVDDIFCLFQGHIENLPFLKQQYGLNKITNEAIIVIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYP D+V+++  G FAF+++DS    VFAA            ADG V  +WG  A+G +V
Sbjct: 121 PYPVDKVVRDFHGKFAFILFDSVKKTVFAAA----------DADGSVPFFWGTDAEGHLV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
            SD+ +++K+GCAKSY PFP GC F S GGL SFEHP N++K +PR+DS G +CGA FKV
Sbjct: 181 FSDNTEMVKKGCAKSYGPFPKGCFFTSSGGLRSFEHPKNELKPVPRVDSSGDVCGATFKV 240

Query: 241 DVYTR--VNSIPRRGSEANWA 260
           D  T+     +PR  S  NWA
Sbjct: 241 DAETKREGTKMPRVDSSQNWA 248

[Close]
BLAST of Lsi04G013210 vs. TAIR10
Match: AT3G22850.1 (AT3G22850.1 Aluminium induced protein with YGL and LRDR motifs)

HSP 1 Score: 219.2 bits (557), Expect = 3.1e-57
Identity = 116/262 (44.27%), Postives = 156/262 (59.54%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSP--ASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLA 60
           MLAIF K  A  PE L      S  A K   LP    N F S +P    ++N G +  +A
Sbjct: 1   MLAIFDKNVAKTPEALQGQEGGSVCALKDRFLP----NHFSSVYP-GAVTINLGSSGFIA 60

Query: 61  YVSPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRD 120
             S  +   +  RLF   DD++C+F G + N+  L +QYGL+K + E   +IEAYRTLRD
Sbjct: 61  -CSLEKQNPLLPRLFAVVDDMFCIFQGHIENVPILKQQYGLTKTATEVTIVIEAYRTLRD 120

Query: 121 RGPYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGS 180
           RGPY A+QV+++  G F F++YD     VF A             DG V LYWG  A+G 
Sbjct: 121 RGPYSAEQVVRDFQGKFGFMLYDCSTQNVFLA----------GDVDGSVPLYWGTDAEGH 180

Query: 181 VVISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANF 240
           +V+SDDV+ +K+GC KS+APFP GC F S GGL S+EHP N++K +PR+DS G +CG  F
Sbjct: 181 LVVSDDVETVKKGCGKSFAPFPKGCFFTSSGGLRSYEHPSNELKPVPRVDSSGEVCGVTF 240

Query: 241 KVDVYTRVNSIPRRGSEANWAE 261
           KVD   +  ++PR GS  NW++
Sbjct: 241 KVDSEAKKEAMPRVGSVQNWSK 246

[Close]
BLAST of Lsi04G013210 vs. TAIR10
Match: AT5G19140.1 (AT5G19140.1 Aluminium induced protein with YGL and LRDR motifs)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-50
Identity = 114/243 (46.91%), Postives = 146/243 (60.08%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETL-NDFLSRHPHNTFSVNFGQAAVLAY 60
           ML IF  A   PPEEL +  S T S  PK    TL N F+ ++P +  SV  G    LAY
Sbjct: 1   MLGIFSGAIVSPPEELVAAGSRTPS--PKTTGSTLVNRFVEKNP-SAVSVQVGDYVQLAY 60

Query: 61  VSPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDR 120
            S H    ++ R F   D+I+CLF GSL+NL +L +QYGL+K +NE + +IEAY+TLRDR
Sbjct: 61  -SHHNESPLRPRSFGAKDEIFCLFQGSLDNLGSLKQQYGLAKNANEVLLVIEAYKTLRDR 120

Query: 121 GPYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSV 180
            PYPA+ V+  L G FAFVV+D     +F A              G V LYWGI ADG V
Sbjct: 121 APYPANHVVAHLSGDFAFVVFDKSTSTLFVA----------SDQVGKVPLYWGITADGYV 180

Query: 181 VISDDVDVIKEGCAKSYAPFPTGCMFHSE-GGLMSFEHPMNKMKAMPRIDSEGAMCGANF 240
             +DDVD++K  C KS A FP GC + +  GGL SFE+P NK+ A+P   +EG + GA F
Sbjct: 181 AFADDVDLLKGACGKSLASFPQGCYYSTALGGLRSFENPKNKITAVPA--NEGEIWGATF 227

Query: 241 KVD 242
           KV+
Sbjct: 241 KVE 227

[Close]
BLAST of Lsi04G013210 vs. NCBI nr
Match: gi|659103105|ref|XP_008452477.1| (PREDICTED: stem-specific protein TSJT1 isoform X1 [Cucumis melo])

HSP 1 Score: 490.0 bits (1260), Expect = 2.7e-135
Identity = 242/285 (84.91%), Postives = 254/285 (89.12%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+ FAHPPEEL SPAS + SK PKLPQETLNDF+SRHP NTFSVNFGQAAVLAYV
Sbjct: 1   MLAIFHQTFAHPPEELKSPASFSGSKAPKLPQETLNDFISRHPLNTFSVNFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           SP + FS+ QRLFCGFD+IYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  SP-QSFSVHQRLFCGFDEIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFM---------------------WVII 180
           PYPADQV+K+LDGSFAFVVYDSRAGAVFAALV+ +                     ++II
Sbjct: 121 PYPADQVIKDLDGSFAFVVYDSRAGAVFAALVYSLSLNELLSKSLCELLQIALKDWFLII 180

Query: 181 KQGADGGVKLYWGIAADGSVVISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMN 240
           KQGADGGVKLYWGIAADGSVVISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMN
Sbjct: 181 KQGADGGVKLYWGIAADGSVVISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMN 240

Query: 241 KMKAMPRIDSEGAMCGANFKVDVYTRVNSIPRRGSEANWAEWDTN 265
           KMKAMPRIDSEGAMCGANFKVDVYTRVNSIPRRGSEANWAEWDTN
Sbjct: 241 KMKAMPRIDSEGAMCGANFKVDVYTRVNSIPRRGSEANWAEWDTN 284

[Close]
BLAST of Lsi04G013210 vs. NCBI nr
Match: gi|449446945|ref|XP_004141230.1| (PREDICTED: stem-specific protein TSJT1 [Cucumis sativus])

HSP 1 Score: 485.7 bits (1249), Expect = 5.0e-134
Identity = 237/264 (89.77%), Postives = 242/264 (91.67%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+ FAHPPEEL SPAS + SK PKLPQETLNDF+SRHP NTFS+NFGQAAVLAYV
Sbjct: 1   MLAIFHQTFAHPPEELKSPASFSGSKAPKLPQETLNDFISRHPQNTFSINFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           SP     + QRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  SPQSFSLVHQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQVLKELDGSFAFVVYDSRAGAVFAAL          GADGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAAL----------GADGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV
Sbjct: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWDTN 265
           DVYTRVNSIPRRGSEANWAEWDTN
Sbjct: 241 DVYTRVNSIPRRGSEANWAEWDTN 254

[Close]
BLAST of Lsi04G013210 vs. NCBI nr
Match: gi|659103108|ref|XP_008452478.1| (PREDICTED: stem-specific protein TSJT1 isoform X2 [Cucumis melo])

HSP 1 Score: 484.2 bits (1245), Expect = 1.5e-133
Identity = 237/264 (89.77%), Postives = 245/264 (92.80%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFH+ FAHPPEEL SPAS + SK PKLPQETLNDF+SRHP NTFSVNFGQAAVLAYV
Sbjct: 1   MLAIFHQTFAHPPEELKSPASFSGSKAPKLPQETLNDFISRHPLNTFSVNFGQAAVLAYV 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
           SP + FS+ QRLFCGFD+IYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  SP-QSFSVHQRLFCGFDEIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQV+K+LDGSFAFVVYDSRAGAVFAAL          GADGGVKLYWGIAADGSVV
Sbjct: 121 PYPADQVIKDLDGSFAFVVYDSRAGAVFAAL----------GADGGVKLYWGIAADGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV
Sbjct: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWDTN 265
           DVYTRVNSIPRRGSEANWAEWDTN
Sbjct: 241 DVYTRVNSIPRRGSEANWAEWDTN 253

[Close]
BLAST of Lsi04G013210 vs. NCBI nr
Match: gi|1009161790|ref|XP_015899084.1| (PREDICTED: stem-specific protein TSJT1-like [Ziziphus jujuba])

HSP 1 Score: 450.3 bits (1157), Expect = 2.3e-123
Identity = 217/264 (82.20%), Postives = 233/264 (88.26%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFHKAFAHPPEELNSPAS   SK PKLPQETL DFLSR+P NTFS+ F  AAVLAY+
Sbjct: 1   MLAIFHKAFAHPPEELNSPASYNGSKKPKLPQETLKDFLSRNPQNTFSMTFATAAVLAYI 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P RP S+QQRLFCG DDIYC+FLG+LNNLC LNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPQRP-SLQQRLFCGCDDIYCVFLGNLNNLCVLNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQVLK++DGSFAFVVYDS+AG VFAAL          G+DGGVKLYWGIA DGSVV
Sbjct: 121 PYPADQVLKDMDGSFAFVVYDSKAGTVFAAL----------GSDGGVKLYWGIAGDGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD+++IKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV
Sbjct: 181 ISDDLEIIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWDTN 265
           D YTRVNSIPR GSE NW +W+ N
Sbjct: 241 DKYTRVNSIPRVGSEVNWTDWNFN 253

[Close]
BLAST of Lsi04G013210 vs. NCBI nr
Match: gi|1009161792|ref|XP_015899085.1| (PREDICTED: stem-specific protein TSJT1-like [Ziziphus jujuba])

HSP 1 Score: 448.4 bits (1152), Expect = 8.9e-123
Identity = 216/264 (81.82%), Postives = 232/264 (87.88%), Query Frame = 1 

Query: 1   MLAIFHKAFAHPPEELNSPASSTASKPPKLPQETLNDFLSRHPHNTFSVNFGQAAVLAYV 60
           MLAIFHKAFAHPPEELNSPAS   SK PKLPQETL DFLSR+P NTFS+ F  AAVLAY+
Sbjct: 1   MLAIFHKAFAHPPEELNSPASYNGSKKPKLPQETLKDFLSRNPQNTFSMTFATAAVLAYI 60

Query: 61  SPHRPFSIQQRLFCGFDDIYCLFLGSLNNLCALNKQYGLSKGSNEAMFLIEAYRTLRDRG 120
            P RP S+QQ LFCG DDIYC+FLG+LNNLC LNKQYGLSKGSNEAMFLIEAYRTLRDRG
Sbjct: 61  PPQRP-SLQQTLFCGCDDIYCIFLGNLNNLCVLNKQYGLSKGSNEAMFLIEAYRTLRDRG 120

Query: 121 PYPADQVLKELDGSFAFVVYDSRAGAVFAALVHFMWVIIKQGADGGVKLYWGIAADGSVV 180
           PYPADQVLK++DGSFAFVVYDS+AG VFAAL          G+DGGVKLYWGIA DGSVV
Sbjct: 121 PYPADQVLKDMDGSFAFVVYDSKAGTVFAAL----------GSDGGVKLYWGIAGDGSVV 180

Query: 181 ISDDVDVIKEGCAKSYAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240
           ISDD+++IKEGCAKS+APFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV
Sbjct: 181 ISDDLEIIKEGCAKSFAPFPTGCMFHSEGGLMSFEHPMNKMKAMPRIDSEGAMCGANFKV 240

Query: 241 DVYTRVNSIPRRGSEANWAEWDTN 265
           D YTRVNSIPR GSE NW +W+ N
Sbjct: 241 DKYTRVNSIPRVGSEVNWTDWNFN 253

The following BLAST results are available for this feature:
BLAST of Lsi04G013210 vs. Swiss-Prot
Match NameE-valueIdentityDescription
TSJT1_TOBAC7.8e-2640.00Stem-specific protein TSJT1 OS=Nicotiana tabacum GN=TSJT1 PE=2 SV=1[more]
BLAST of Lsi04G013210 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L069_CUCSA3.5e-13489.77Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638320 PE=4 SV=1[more]
A0A151SR83_CAJCA4.0e-12280.92Stem-specific protein TSJT1 OS=Cajanus cajan GN=KK1_003554 PE=4 SV=1[more]
W9RJH0_9ROSA6.9e-12281.61Uncharacterized protein OS=Morus notabilis GN=L484_025667 PE=4 SV=1[more]
Q93V62_ARATH1.2e-12181.85AT4g27450/F27G19_50 OS=Arabidopsis thaliana GN=At4g27450 PE=1 SV=1[more]
D7MEF5_ARALL1.2e-12181.85Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRA... [more]
BLAST of Lsi04G013210 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G27450.15.9e-12581.85 Aluminium induced protein with YGL and LRDR motifs[more]
AT3G15450.11.2e-10470.00 Aluminium induced protein with YGL and LRDR motifs[more]
AT5G43830.11.9e-6248.28 Aluminium induced protein with YGL and LRDR motifs[more]
AT3G22850.13.1e-5744.27 Aluminium induced protein with YGL and LRDR motifs[more]
AT5G19140.12.8e-5046.91 Aluminium induced protein with YGL and LRDR motifs[more]
BLAST of Lsi04G013210 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659103105|ref|XP_008452477.1|2.7e-13584.91PREDICTED: stem-specific protein TSJT1 isoform X1 [Cucumis melo][more]
gi|449446945|ref|XP_004141230.1|5.0e-13489.77PREDICTED: stem-specific protein TSJT1 [Cucumis sativus][more]
gi|659103108|ref|XP_008452478.1|1.5e-13389.77PREDICTED: stem-specific protein TSJT1 isoform X2 [Cucumis melo][more]
gi|1009161790|ref|XP_015899084.1|2.3e-12382.20PREDICTED: stem-specific protein TSJT1-like [Ziziphus jujuba][more]
gi|1009161792|ref|XP_015899085.1|8.9e-12381.82PREDICTED: stem-specific protein TSJT1-like [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR024286DUF3700
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006522 alanine metabolic process
biological_process GO:0008150 biological_process
biological_process GO:0006529 asparagine biosynthetic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0010310 regulation of hydrogen peroxide metabolic process
biological_process GO:0001666 response to hypoxia
biological_process GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway
cellular_component GO:0005829 cytosol
cellular_component GO:0005634 nucleus
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G013210.1Lsi04G013210.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024286Domain of unknown function DUF3700PFAMPF12481DUF3700coord: 2..240
score: 1.2E
IPR024286Domain of unknown function DUF3700SMARTSM01172DUF3700_2coord: 2..240
score: 2.7E
NoneNo IPR availablePANTHERPTHR11772ASPARAGINE SYNTHETASEcoord: 1..262
score: 8.1E
NoneNo IPR availablePANTHERPTHR11772:SF14SUBFAMILY NOT NAMEDcoord: 1..262
score: 8.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G013210Csa4G638320Cucumber (Chinese Long) v2culsiB293
Lsi04G013210CSPI04G23620Wild cucumber (PI 183967)cpilsiB293
Lsi04G013210Cucsa.123280Cucumber (Gy14) v1cgylsiB187
Lsi04G013210CmaCh01G011990Cucurbita maxima (Rimu)cmalsiB426
Lsi04G013210CmaCh09G008790Cucurbita maxima (Rimu)cmalsiB026
Lsi04G013210CmoCh09G008680Cucurbita moschata (Rifu)cmolsiB014
Lsi04G013210CmoCh01G012530Cucurbita moschata (Rifu)cmolsiB414
Lsi04G013210Cla023397Watermelon (97103) v1lsiwmB340
Lsi04G013210MELO3C016712Melon (DHL92) v3.5.1lsimeB317
Lsi04G013210ClCG11G018200Watermelon (Charleston Gray)lsiwcgB265
Lsi04G013210MELO3C016712.2Melon (DHL92) v3.6.1lsimedB333
Lsi04G013210Cla97C11G224280Watermelon (97103) v2lsiwmbB272
Lsi04G013210Bhi09G002785Wax gourdlsiwgoB398
Lsi04G013210Cp4.1LG06g06890Cucurbita pepo (Zucchini)cpelsiB640
Lsi04G013210Cp4.1LG02g01630Cucurbita pepo (Zucchini)cpelsiB464
Lsi04G013210Carg14688Silver-seed gourdcarlsiB284
Lsi04G013210Carg17113Silver-seed gourdcarlsiB154
Lsi04G013210CsaV3_4G033850Cucumber (Chinese Long) v3cuclsiB314
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G013210Wild cucumber (PI 183967)cpilsiB051
Lsi04G013210Cucumber (Chinese Long) v2culsiB050
Lsi04G013210Melon (DHL92) v3.5.1lsimeB290
Lsi04G013210Watermelon (Charleston Gray)lsiwcgB277
Lsi04G013210Watermelon (97103) v1lsiwmB299
Lsi04G013210Cucumber (Gy14) v2cgyblsiB046
Lsi04G013210Cucumber (Gy14) v2cgyblsiB271
Lsi04G013210Melon (DHL92) v3.6.1lsimedB304
Lsi04G013210Cucumber (Chinese Long) v3cuclsiB056
Lsi04G013210Watermelon (97103) v2lsiwmbB278
Lsi04G013210Bottle gourd (USVL1VR-Ls)lsilsiB098
Lsi04G013210Cucumber (Gy14) v1cgylsiB196
Lsi04G013210Cucumber (Gy14) v1cgylsiB553
Lsi04G013210Cucurbita maxima (Rimu)cmalsiB217
Lsi04G013210Cucurbita maxima (Rimu)cmalsiB382
Lsi04G013210Cucurbita moschata (Rifu)cmolsiB205
Lsi04G013210Cucurbita moschata (Rifu)cmolsiB367
Lsi04G013210Cucurbita pepo (Zucchini)cpelsiB034