Lsi04G013090 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGTAATCTCTCTTCCTTTATTTATTCCTTTTTTTCTCTCTCTTATTTGTAGACTTAAAATAACATAATTGAGATGATAATATGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTATTGATGACCTTAATTTCATAGTCAAAATGTTGTTTGCCTCAAGTTTTGAAAATAATGAACTATAACTATTTGTCGTTGTTAGAACACACTAAGTGCGTGTTAATTATTCATACTGTGTCTCGAGATTTTAGCGGGATAAAATTAAGGTTATTTGTTGTAACGTCCAATTTCAAGAGGGGTACATAAATGAGTCCAGATCACATTTGAATGAGGGGATCCTAAAGATATGAAAGTAGGGTTAAAAAGGTTTAAAAGAATTGATACCTACCACCCAAGGTGCATTTTCTTTTTAACTCTCAAATTAAGTATGCTTAGCATGAAGAAATTATATGTTGGGTGATCTTCTAAAAAACCTATTTCACATTAGATAATATGGATAATTAACATGCTCTTAGTTATGCTCAGACAATGATAGAGGGTAGCTATACTTCATTATTTAAAAAATATGAGGCAAAAACATTACAAATTTGAAATTTAGGTCATTCGTACAAAAAAAAAAAAAAAAAAACTTCGATAAAATGGTTTATTTTAGGGAAGATTTCGTGTATTTTGCAAAAATTTGTTTTGAAGAATTTGGAGACAGAGGATAACGATAAATGAGATAAATCTAGTGGCAATAAAGCTTACTTAGAAGGAGTTTACCCGCCAGCCCATTGCTCCTCACCTTTTGGAAAATGCTCTATTGGCAACTCTGATATTGAGCCTCTCATTGTTGTGCACAATATGTTACTTGCTCATGCCAAGGCCGTTCGTCTTTATCGCGTCCATTTTCATGTAAGTTCTTTCTTCCTTTTCTCCTTTAGGCTATGTTTACGTATCAGAAATTGAAATGAGCTAGAATCGAAATGAAAATCCATCGGAATGAAATGTTTTTATTTCTTTATTGTTGTCTACTAGGAGTTGTGTCTAGAATTTGAATTAAAAAAATAATAATAATAAAAATAAAAATAAAAAGCTCAACTTGTTTACTAGAGATAAATTGAGAAGCATACTATGAATTAAGATATATAATAACTAATAAGATACCGGCATTTTCATTTTTTTTTAACTAATTGAAATGTGTTACTAAATAATACATGAATATAACTTTTAATTAAAATAATAATAATAATAATAATAATAATAATAATGAGAATTTTTTAAAATATAAAAATAAAGAAAACTTATTTACACAAAATAGAAAAAATTTTAGATAGTTGTGATAGACGCTGATAGAAGTCTATCATGGTCTATCAGGAATAGAAATGATGGAAGTCTATCCGTGGTAGACGCTGATAGAAGTCTATCAATGACTATAAGTGTTTTTTTTTTTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTTTCTATTCGTAAAATTTTTCTTAATAATAATAATAATAATAATAATTTATTTTTATTGTTATTTTATTTTGATACTGATGCCTTTAATTTTGACAGTTTATTCCATCTTAAAAATAATCTAATTAAAATAAAATTCCTCTATCAATTAAAAAAATTTAAATGTTTTCTTAAAAAAAACTTATTTGTATATGTTATTTAATATGAATACATTATTTTAACAAAATAAATAGTATTTAAATATTTAAAAACTAAATGAAAATTTTAAATTGTTATAAAAGGATTAGGTGTAATAAAATTATAATATATTAATATATTTATTTGGTTAAAATTCAAATTTGGTCCCTATGATTTAGAGAAATTAGAGTTTAGTCCATATGGTTTGATAAAACCTTCATATATAGATCCTTTGGTAGGGACTATTTTTGAGAATTTTATCAAACCATAAGGATTATTTATGAGAATTTATCCAACCGGAATTGAATTCTAACTTTTAAAACCAAACAGATTAAATTCTAACTTTCTTCAAACTAAAGAGCAAACAAAAATCGTAATGACACCCTAATAATTTTTAATAATTTTTTTTTTTTGCTATTTTGCGTAAATAATTCCCTTATTTTTCTATTTTTAAAAATTCTCATTTTTTTTTAAAGAATGTTAATTATTTGTAGGGAAAACAAGGTGGATCCATAGGAATAGCAGCACGTGGACACATGTATGAACCACTAACAGACCATGAATTTGACAAACATGCTGCCCACAGAGCCCTGCTTTTCAACTTTGCCTGGTTTGTTTTATTCTATCCTTTTACCCTTTTTTTTTTCTCTCTTTCTCTTTCTAATCTTTGTCCAACAAAGTTTCAATGGGGCTAACATTAAAAAAAATTATTTATAAATATAGCAAAATGTTAGAGTGATAGACAGTACTGATAGACAGTGATAGACATCTGTATCTATCAGTGTTAGATGATAGTAGTCTATTAGTATCTATCACTGATAGACGGGGACATTTTGCTATATTTATAAGTATCTTGGTTCATTTTGCCGTATTTGAAACAACCCTTAAAAAAATTAAATATATCTTATTAATTGAAAATGGAAATGGTCAGTAATAAGATGCCTTTTACCTTCCATTAAGTTTGGAAGTTTGAATTATTGAATTAGATAAGATAATAAATTTATACCCATTTTTCATGATTATTCTTCGTAGGGCTCATTTAGATTGAATTTTTTAGTGTTTATAAACATTTTTCTTTGCACTTATAAACACTTAGAAAGTCAATTCAAACGGACCCTAATTTTCATGCATAATAATTTTTGCCATCTTTAAAAATATAGAAACTGAATTCGGAAAGTTGTTGCGTATTTCTCAAATAACAATACTACTTTTGCATATCGTATTATTCTTTTGATAATATTTGTTGACAGAAAAAAAAAAAAAAACATAAAAGTTTGAAACTTAATTATATTAAAGGGTCAACTCATTTTTCATGGAGAATTTTTAAAAATAAAAAAACAAGAAAAATTATTTACGCAAAATAGCAAAATATTTAGATAGTTGTGATAGACGCTGATAGTAATCTATCAAAGTCTACCAGTGATAAAAATGATAGAAGTCTATTACTGGTAGATGTTGATAGAAGTCTATCAATGTCTATCAGTGTTTTTTTTTGCTACTTTCTGTAAATAGTTTGACATTTTTTCTATCTCTGAAAATTTCTTTTTTTTTATTGCTATTTTCCTTCATGTTTAAATATTTTTATTTCAATATATATTAAAAATTCTTGACCTAAGTTCTTCAGGACATTTTTAAATTTTAATTTCTCAAAAAAAAAAAATTGATGCGTCATGAAATTATTGTTTAAATAATAGGATTGCGTAAATGTGGACATGTCATTTGAATGCTATTTGATGCAAATAACTTATCATATGGAGTTGAGGTGATGTGTTCTCAAAAGTCTTATAAGAACATGATTTATGATTTTTCATTGGCTAACTCTTTCAAAAGTTATATTACTTTATATAACTTTTTTAGTTTATATAAATAATTTGAACTTCTTATCATGCTTTTTTTTTTTAAAAAAAAAATAAAGAATAAAAAAAAGTTTAATTTTCTTTCTAAACATGAATAGGGTGTATGATCCTATTGTATATGGAGATTATCCTACGGAAATGAGAGAACTTTTAGGAAACCAACTTCCAAGTTTCTCTGACATAGAGAAAAATATTATAAGAGAAAGCTTGGACTACATTGGCATCAACCACTACACCACTTTTTATACAAAGGATTGTCTTCATTCCACTTGCTCTCAAGGTTCATATCATCCTATAAAAGGATTTCTTGAAATTATGGCGTATCGAGATGACATTTCTATTGGAGAACCTGTATGTTTTTTTTCCCACTACTGCTATTTTCTATTTTAATTTAAAATTTATTGAAGATCTTATGCCTTAACTAATTGAATTATGTTTAAGTTGATGTGTTCAAATCAGAGTTGAAGAACTATCAAATAAATAAATGTCATATTAATTGTTGATTAAAACATACACATATAACTAATGTTTCATGACGATAACATTAAACTTATTATTGTACAAGACTCTTTAAAGAAAGATAGATCCCAAAGATACAAGTGATCATATAATAGTTTATATCAAATGATTTTGATAACAGGCTCATAACTTCTCATATAAAAGTGTGGTTTGTTTGAGTTAAAAACGACCCATTAATCTTGAGGGATTATGGGAACCCATAGGTCTTGGATTATGGTGATCTCCAAAATACTATGCTTCTTTAGTCTCTTATTCTCCATTTTGATTTTCTTTCCTGCTTCGATCTTTTATACAACTTGATTGTTCTCTATGGTCATTATATTGTAGAATAATCCTGAAGTTGCCTTTTTATATGACAGACTAGAGAAGCAAGATTCTTTGTTGTTCCAAGAGGCTTGGAGGAAATCATTAA ATGCATGGCAATAAAGCTTACTTAGAAGGAGTTTACCCGCCAGCCCATTGCTCCTCACCTTTTGGAAAATGCTCTATTGGCAACTCTGATATTGAGCCTCTCATTGTTGTGCACAATATGTTACTTGCTCATGCCAAGGCCGTTCGTCTTTATCGCGTCCATTTTCATACCATGAATTTGACAAACATGCTGCCCACAGAGCCCTGCTTTTCAACTTTGCCTGGTTTGGTGTATGATCCTATTGTATATGGAGATTATCCTACGGAAATGAGAGAACTTTTAGGAAACCAACTTCCAAGTTTCTCTGACATAGAGAAAAATATTATAAGAGAAAGCTTGGACTACATTGGCATCAACCACTACACCACTTTTTATACAAAGGATTGTCTTCATTCCACTTGCTCTCAAGGTTCATATCATCCTATAAAAGGATTTCTTGAAATTATGGCGTATCGAGATGACATTTCTATTGGAGAACCTAGAAGCAAGATTCTTTGTTGTTCCAAGAGGCTTGGAGGAAATCATTAA ATGCATGGCAATAAAGCTTACTTAGAAGGAGTTTACCCGCCAGCCCATTGCTCCTCACCTTTTGGAAAATGCTCTATTGGCAACTCTGATATTGAGCCTCTCATTGTTGTGCACAATATGTTACTTGCTCATGCCAAGGCCGTTCGTCTTTATCGCGTCCATTTTCATACCATGAATTTGACAAACATGCTGCCCACAGAGCCCTGCTTTTCAACTTTGCCTGGTTTGGTGTATGATCCTATTGTATATGGAGATTATCCTACGGAAATGAGAGAACTTTTAGGAAACCAACTTCCAAGTTTCTCTGACATAGAGAAAAATATTATAAGAGAAAGCTTGGACTACATTGGCATCAACCACTACACCACTTTTTATACAAAGGATTGTCTTCATTCCACTTGCTCTCAAGGTTCATATCATCCTATAAAAGGATTTCTTGAAATTATGGCGTATCGAGATGACATTTCTATTGGAGAACCTAGAAGCAAGATTCTTTGTTGTTCCAAGAGGCTTGGAGGAAATCATTAA MHGNKAYLEGVYPPAHCSSPFGKCSIGNSDIEPLIVVHNMLLAHAKAVRLYRVHFHTMNLTNMLPTEPCFSTLPGLVYDPIVYGDYPTEMRELLGNQLPSFSDIEKNIIRESLDYIGINHYTTFYTKDCLHSTCSQGSYHPIKGFLEIMAYRDDISIGEPRSKILCCSKRLGGNH
BLAST of Lsi04G013090 vs. Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=3 SV=2) HSP 1 Score: 139.4 bits (350), Expect = 3.7e-32 Identity = 71/174 (40.80%), Postives = 96/174 (55.17%), Query Frame = 1
BLAST of Lsi04G013090 vs. Swiss-Prot
Match: BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 PE=2 SV=2) HSP 1 Score: 132.5 bits (332), Expect = 4.5e-30 Identity = 68/176 (38.64%), Postives = 100/176 (56.82%), Query Frame = 1
BLAST of Lsi04G013090 vs. Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29 Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 1
BLAST of Lsi04G013090 vs. Swiss-Prot
Match: BGL45_ARATH (Beta-glucosidase 45 OS=Arabidopsis thaliana GN=BGLU45 PE=1 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.9e-29 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 1
BLAST of Lsi04G013090 vs. Swiss-Prot
Match: BGL18_ORYSJ (Beta-glucosidase 18 OS=Oryza sativa subsp. japonica GN=BGLU18 PE=3 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 2.5e-28 Identity = 60/151 (39.74%), Postives = 86/151 (56.95%), Query Frame = 1
BLAST of Lsi04G013090 vs. TrEMBL
Match: A0A0A0LD30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852490 PE=3 SV=1) HSP 1 Score: 214.5 bits (545), Expect = 1.0e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. TrEMBL
Match: K4GMG6_CUCSA (Beta-glucosidase (Fragment) OS=Cucumis sativus GN=BG1 PE=2 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 1.3e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. TrEMBL
Match: A0A0A0L4S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638400 PE=3 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.5e-51 Identity = 101/173 (58.38%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. TrEMBL
Match: A0A0A0LFY4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852480 PE=3 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 7.7e-45 Identity = 94/172 (54.65%), Postives = 111/172 (64.53%), Query Frame = 1
BLAST of Lsi04G013090 vs. TrEMBL
Match: A0A067G3G8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g012716mg PE=3 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 6.5e-44 Identity = 90/174 (51.72%), Postives = 110/174 (63.22%), Query Frame = 1
BLAST of Lsi04G013090 vs. TAIR10
Match: AT4G21760.1 (AT4G21760.1 beta-glucosidase 47) HSP 1 Score: 139.4 bits (350), Expect = 2.1e-33 Identity = 71/174 (40.80%), Postives = 96/174 (55.17%), Query Frame = 1
BLAST of Lsi04G013090 vs. TAIR10
Match: AT1G61820.1 (AT1G61820.1 beta glucosidase 46) HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30 Identity = 66/179 (36.87%), Postives = 99/179 (55.31%), Query Frame = 1
BLAST of Lsi04G013090 vs. TAIR10
Match: AT1G61810.3 (AT1G61810.3 beta-glucosidase 45) HSP 1 Score: 129.8 bits (325), Expect = 1.6e-30 Identity = 65/174 (37.36%), Postives = 97/174 (55.75%), Query Frame = 1
BLAST of Lsi04G013090 vs. TAIR10
Match: AT4G27820.1 (AT4G27820.1 beta glucosidase 9) HSP 1 Score: 105.1 bits (261), Expect = 4.3e-23 Identity = 55/140 (39.29%), Postives = 81/140 (57.86%), Query Frame = 1
BLAST of Lsi04G013090 vs. TAIR10
Match: AT2G44480.1 (AT2G44480.1 beta glucosidase 17) HSP 1 Score: 104.0 bits (258), Expect = 9.7e-23 Identity = 61/175 (34.86%), Postives = 89/175 (50.86%), Query Frame = 1
BLAST of Lsi04G013090 vs. NCBI nr
Match: gi|659109407|ref|XP_008454703.1| (PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo]) HSP 1 Score: 216.9 bits (551), Expect = 2.9e-53 Identity = 105/173 (60.69%), Postives = 121/173 (69.94%), Query Frame = 1
BLAST of Lsi04G013090 vs. NCBI nr
Match: gi|778686431|ref|XP_011652391.1| (PREDICTED: beta-glucosidase 18 isoform X2 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. NCBI nr
Match: gi|700204767|gb|KGN59900.1| (hypothetical protein Csa_3G852490 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. NCBI nr
Match: gi|778686428|ref|XP_011652390.1| (PREDICTED: beta-glucosidase 18 isoform X1 [Cucumis sativus]) HSP 1 Score: 214.5 bits (545), Expect = 1.4e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
BLAST of Lsi04G013090 vs. NCBI nr
Match: gi|397140984|gb|AFO12647.1| (beta-glucosidase, partial [Cucumis sativus]) HSP 1 Score: 214.2 bits (544), Expect = 1.9e-52 Identity = 102/173 (58.96%), Postives = 118/173 (68.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |