Lsi04G013060 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G013060
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionBeta-glucosidase
Locationchr04 : 20751540 .. 20754699 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTCTTTCTCCTCTACCTCTATTTTTATTTTTGTTTAAAATTTATTGAAGATCTTATGCCTTAACTAATTGAATTTTATCATTTACAAGTTGGCATGTTAAAATCAAAGTTAAGAACTAATAAAGAAATTTAAAAGGCCGTTTTCAATTATATTATTGATTAGACATACACATATACAACTAATACTTTATGACCTAAAGGGCGATAACATTAACTATTATTGTACAAGACTCTTTAAATAAAAATAAAGGCCAAGAACAAGCTCAAAATAGTTTAAATAAGAGAGGAAATAGTTCTTAAAAAATTGCATAAACAAATTACTGGGAAATTGTGAATTATTTGAAAAACTCAACTTCTAATCTTTTTTTATATTAAAAATGATAAAAGTGATAATTACAATTTTAAAATAATAAACTTCAAGAAATTAAATAAGTGTAGGTCTTCTATATTAACCTATGAGTATGTATGTGTTGAATTATTTTCATAATATTATTCGTAGTATATGACAAGTGATTTTGAGTTATTTAACGGATAATATCAAGTAATTTTGAAGATGGATTCATGACTTCTCATACAGAGACATGTCATGTTAGGCAGAAAACAACTCATTGGTCATGAGAATTATGGAAAAGAACTCTATGGTCAATATATATAAATATAAGACTATGGTCTCCAAAACACTATGTCTCGTTAGCATCCTATTTCCCATCTGAAGTTCTACTCAATCCGGTCTGATTTGTCTATCCATAGTTCCAAGTAACTTTAACATCTTTATAGATTTTAATTTTCTTCCATGCTTAGATCTTTTATCTCGATTGTTCTCTATGGTCATTGTAGAATAATCATGAGCTTGGATTTTATTATTTCTCAACATATGTATATCCTAAAGTTACCTTTTTATATGGTAGACTGGAGTAGCAACATTCTCTGTTGTTTCAAGAGGCTTGGAAGAAATCATTAACTATGCTAAAGAAAGGTATCCCAACAAGCCCATCTTTATCACAGAAAATGGTAAGTTAACACAAAAATATGATTGTATTTGTAATTACATTAGTGTGCCACGTCAAATTAAACTGTTCGGACTTGTTTATGAAACTATCGTATAAATAATTATTATGTTTGTATGTGAAAAATACTTGTTTTCAACGTTTTCTCAAGTACGACCGTTTTCTAAAACAGTTTTTTAAGTACTTTTTAAATTTATAACTAAATATTAGGAAAAATTTGAAATTTTATTTTAATTAATATAGCTATTTTTAAGATCTTGAAAAGTGCTTTCTTTTACTTTTCAGGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGTAAATAAATAGCCCCTTTATTACCTTTTCTATGTATTATCTCTTTTTCATTTTTAATCCAAGGTTTTAGGTATCCTTTATTTTAGAAAAATTATTTTCAACAATTTTGAGTGATTATCCCATATCTTTATTGGGAGAAGTTTATAGGCACTTTTTAGACCTAACTCAAGTATTTGACTTATAAATTTTTTTCAATCCAAACAACACTATTATTAAATAATGATTTCAACTTTTGAAGCATTTAAATTAGGTTGGTTTGAGTTGTTTTGATCATTTATTCAAATTTTTATTTTAAGAAAAATTAAAATATTAATATGTAAAACATCTTTTTAATTATTTTTTAGGGAAATTGTTGTGTATAGAAAAAAACAAAAGTAATTACACATATAGAAAAAAGTGCACTCCATGCTTTTGTATTTCTCACTTTTTTTTTCTATATGTGTAATTACTTTTATTTTTTTCCTATTTATGAAAAGCCTATTTTTTAATACTGAAATCAAACTATCAATACAATTACAATGTATATGATGAAAAGTAACCTTTCAAATAATTAAAAAAATATATTTAGTAGTTATCGGATAGTAAATAATAAAAAAATCATGAAATTAAATAACTTTGTAATAAGTATATGTATATGTATAATTGCTTGGAATGTAAAACAAATACTCTTTAAAATAAATAATAAGTTTGTCTTGCTTCCTAAATTTTCATTTATTTGAAGTCAATCAAATCCAACCTAAACTGTACGGATTGAGCTGGGTTGATTAGATTTTTCTAATCATCAATCTTTTTTAACACTTCTAATTTTCGCTTATAGTCGTTATTGTTTGGCCAACCAACTTAAACACATGTCCATAATGATACGATATTATCCATGTTGAATAATCTTAATCCATGCGATACTTAGGGCTTATTTCAATTGACTTTTTAAATGTGTACAAGTGCAAAAAAAAAAAAAATGTTTATAAACACTTAGAAAGTCAATCCAAACAAGTTCTTAGTCTCCATTTTCTAAAAAAGAGCTCATATATCTCAAATCTTTCCTATATTAAATAATGTAATTAATGTTTGATGTAATATCTATACCTTATGTAAGAATTAATAATAATAACAACATTTTTATGATAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAAGAATGCCAAATGCTTTTGGAAAAACTACTTTTATTCATGCTCGTGATTGAATCAATTTCATTAATGAGAAGAAATCATGTTCTAAAGTCCTTGTTGCTAAGAAAAATAATGACGGATGATCAACTTGATTAAATTTACTTATTATTTGTTTCCTTTTCTCTTTTTAGTGTATGGTGTTACTAAAAGAAATGTTATTCCTGGTCGAGGATTAAGAAACTCATTTATTTCTC

mRNA sequence

ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAAGAATGCCAAATGCTTTTGGAAAAACTACTTTTATTCATGCTCGTGATTGAATCAATTTCATTAATGAGAAGAAATCATGTTCTAAAGTCCTTGTTGCTAAGAAAAATAATGACGGATGATCAACTTGATTAAATTTACTTATTATTTGTTTCCTTTTCTCTTTTTAGTGTATGGTGTTACTAAAAGAAATGTTATTCCTGGTCGAGGATTAAGAAACTCATTTATTTCTC

Coding sequence (CDS)

ATGATAAGAGGAAGTTTGGATTATATTGGCATCAACCACTACAGCACTTTGTATACAAAGGATTGTCTTCATTCCAATTGCTCCTCGGAAGCTTCATATCATCCTATACAAGGATTTCTTGAAACCACGTCGTCTCGAGATGACATTTCCATTAGAGATCTTGTACGTTATTCTCCATCAAATGGCGATAGTGACAAAGTTGAGGATATTTTAAATGACACAAAACGAATCAATTACCACAAGAATTACCTTGCTTCCTTGGCTAAAGCAACTAGGAATGGTGGTGATGTGAGAGGGTATTTTGTTTGGTCCTTAATGGATAACTTTGAATGGGCCAATGGGTACACCAAAGGATATGGGCTTTTCTATGTGGACCGACACACACTTAAGCGTCGGCCCAAACTTTCGGCCCAATGGTTTGCTTCTTTGCTCGGCGGCAACCTACAACAACTTGCTAAATCTTCATCCCTCCTAAATACAAATGCTTCTCAGTCCCTCATGGATGCTTAA

Protein sequence

MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASLAKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNLQQLAKSSSLLNTNASQSLMDA
Homology
[Close]
BLAST of Lsi04G013060 vs. Swiss-Prot
Match: BGL47_ARATH (Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=3 SV=2)

HSP 1 Score: 122.5 bits (306), Expect = 4.5e-27
Identity = 59/160 (36.88%), Postives = 91/160 (56.88%), Query Frame = 1 

Query: 3   RGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI----------- 62
           + +LD+IGIN Y++ Y KDCLHS C         +GF+   + +D + +           
Sbjct: 352 KNALDFIGINQYTSRYAKDCLHSVCEPGKGGSRAEGFVYANALKDGLRLGEPVGMEEMLM 411

Query: 63  ------RDLVRYSPSNGDSDKVEDIL-NDTKRINYHKNYLASLAKATRNGGDVRGYFVWS 122
                 +++  Y   NG  +    +L ND +R+ +  NYL +L +A R G DVRGYF WS
Sbjct: 412 YATERYKNITLYVTENGFGENNTGVLLNDYQRVKFMSNYLDALKRAMRKGADVRGYFAWS 471

Query: 123 LMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           L+DNFEW +GYT  +G+++VD  T +R P+LSA W+ + +
Sbjct: 472 LLDNFEWISGYTIRFGMYHVDFSTQERTPRLSASWYKNFI 511

[Close]
BLAST of Lsi04G013060 vs. Swiss-Prot
Match: BGL14_ORYSJ (Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 PE=2 SV=2)

HSP 1 Score: 119.0 bits (297), Expect = 5.0e-26
Identity = 69/176 (39.20%), Postives = 90/176 (51.14%), Query Frame = 1 

Query: 6   LDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI---------RDLVR 65
           LD+IG+NHY+T Y KDC+ S C  +      + F  +   RD + I          D+ R
Sbjct: 326 LDFIGLNHYTTCYVKDCIFSPCEIDPVNADARVF--SLYERDGVPIGKATGAPFFHDVPR 385

Query: 66  ------------------------YSPSNGDSDKVEDILNDTKRINYHKNYLASLAKATR 125
                                   YS ++  +   +D  NDT RI Y + YL SLA A R
Sbjct: 386 GMEEAVTYYKQRYNNTPTYITENGYSQASNSNMTAKDFTNDTGRITYIQGYLISLASAIR 445

Query: 126 NGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
            G DVRGYFVWSL+D+FEW  GYT  +GL++V   TLKR PKLS  W+   L G+L
Sbjct: 446 KGADVRGYFVWSLLDDFEWNFGYTLRFGLYHVHYKTLKRTPKLSVDWYRKFLTGSL 499

[Close]
BLAST of Lsi04G013060 vs. Swiss-Prot
Match: BGL15_ORYSJ (Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica GN=BGLU15 PE=5 SV=2)

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-25
Identity = 60/176 (34.09%), Postives = 95/176 (53.98%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSE-------------------------ASYHP 60
           +++  +D+IGIN Y+ +Y KDC++S C+                           ++Y  
Sbjct: 170 LLQNKVDFIGINQYTAIYAKDCIYSPCALNTYEGNALVYTTGVRNGAKIGKPTAFSTYFV 229

Query: 61  IQGFLETTSSRDDISIRDLVRYSPSNGDSD----KVEDILNDTKRINYHKNYLASLAKAT 120
           +   +E+     +   +D   Y   NG S      +ED++ND +R+NY + YL  L+ A 
Sbjct: 230 VPESIESAVMYVNGRYKDTTIYITENGYSQHSDTNMEDLINDVERVNYLQGYLKYLSSAV 289

Query: 121 RNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 148
           R G +V GYF+WSL+DNFEW  GYT  +GL++VD  T +R PK+SA+W+   L G+
Sbjct: 290 RKGANVGGYFMWSLIDNFEWVFGYTIKFGLYHVDFDTQERIPKMSAKWYRDFLTGS 345

[Close]
BLAST of Lsi04G013060 vs. Swiss-Prot
Match: BGL16_ORYSJ (Beta-glucosidase 16 OS=Oryza sativa subsp. japonica GN=BGLU16 PE=3 SV=2)

HSP 1 Score: 111.7 bits (278), Expect = 7.9e-24
Identity = 58/168 (34.52%), Postives = 87/168 (51.79%), Query Frame = 1 

Query: 6   LDYIGINHYSTLYTKDCLHSNCSSEA-------------------------SYHPIQGFL 65
           +D+IGINHY+ +Y KDC++S C+ +                           Y  +   +
Sbjct: 331 VDFIGINHYTAIYAKDCIYSPCTLDTYEGNALVYAIGRRNGKIIGKPTALHGYFVVPEAM 390

Query: 66  ETTSSRDDISIRDLVRYSPSNGDSD----KVEDILNDTKRINYHKNYLASLAKATRNGGD 125
           E      +   R+   Y   NG S      +ED++ND +R+NY  +YL  L+ A R G +
Sbjct: 391 EKVVMYVNDRYRNTTIYITENGYSQHSDTSMEDLINDVERVNYMHDYLKYLSSAIRKGAN 450

Query: 126 VRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           V GYF WS++DNFEW  GYT  +GL+ VD  T +R P++SA+W+   L
Sbjct: 451 VGGYFAWSIVDNFEWVYGYTVKFGLYQVDFDTQERIPRMSAKWYRDFL 498

[Close]
BLAST of Lsi04G013060 vs. Swiss-Prot
Match: BGL46_ARATH (Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-23
Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL + C+S       +G       + ++SI +L            
Sbjct: 334 DFLGINHYTSYFIQDCLITACNSGDGASKSEGLALKLDRKGNVSIGELTDVNWQHIDPNG 393

Query: 67  ----------------RYSPSNG------DSDKVEDILNDTKRINYHKNYLASLAKATRN 126
                            Y   NG          VE++L+DTKRI Y   YL +L  A R+
Sbjct: 394 FRKMLNYLKNRYHNIPMYITENGFGQLQKPETTVEELLHDTKRIQYLSGYLDALKAAMRD 453

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
           G +V+GYF WSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +  N+
Sbjct: 454 GANVKGYFAWSLLDNFEWLYGYKVRFGLFHVDFTTLKRTPKQSATWYKNFIEQNV 508

[Close]
BLAST of Lsi04G013060 vs. TrEMBL
Match: A0A0A0L4S1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638400 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.9e-47
Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLVR---- 60
           +I+GSLDYI +NHY+TLY KDCLHS CS+     PI+GFL+T   R+ +SI D       
Sbjct: 326 IIKGSLDYICVNHYTTLYAKDCLHSPCSNGGD-RPIKGFLDTMGYRNSVSIGDPTGMDRF 385

Query: 61  -----------------------------YSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS    D +KVEDI+NDTKR+N+H+NYLASL
Sbjct: 386 FVVPRGLEKTINYINQRYPNKPIFVTENGYSTPPSDGNKVEDIINDTKRVNFHRNYLASL 445

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 168
            +A RNG DVRGYFVWSLMDN EW +G+   +GL YVD  TL+RRPKLSA WFASLLGGN
Sbjct: 446 VRAMRNGADVRGYFVWSLMDNLEWIHGFNTRFGLVYVDFQTLERRPKLSAHWFASLLGGN 505

[Close]
BLAST of Lsi04G013060 vs. TrEMBL
Match: A0A0A0LD30_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852490 PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-41
Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCS-----------SEASYHP-------------- 60
           +IRGSLD+I +NHY+T YTKDCLHS C            +  +Y                
Sbjct: 345 IIRGSLDFICVNHYTTFYTKDCLHSACFGGGNHPVTGYLNTTAYRDGVSIGDPTGIDVFF 404

Query: 61  --------IQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   +  +++       I + +   YS    + ++ E ++ DTKR+NYHKNYLASL
Sbjct: 405 VVPRGLGKVINYIKERYPNKPIFVTEN-GYSSPQSEGNETEVLIKDTKRVNYHKNYLASL 464

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A A R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 465 ANAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 524

[Close]
BLAST of Lsi04G013060 vs. TrEMBL
Match: K4GMG6_CUCSA (Beta-glucosidase (Fragment) OS=Cucumis sativus GN=BG1 PE=2 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-41
Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCS-----------SEASYHP-------------- 60
           +IRGSLD+I +NHY+T YTKDCLHS C            +  +Y                
Sbjct: 137 IIRGSLDFICVNHYTTFYTKDCLHSACFGGRNHPVTGYLNTTAYRDGVSIGDPTGIDVFF 196

Query: 61  --------IQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   +  +++       I + +   YS    + ++ E ++ DTKR+NYHKNYLASL
Sbjct: 197 VVPRGLGKVINYIKERYPNKPIFVTEN-GYSSPQSEGNETEVLIKDTKRVNYHKNYLASL 256

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A A R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 257 ANAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 316

[Close]
BLAST of Lsi04G013060 vs. TrEMBL
Match: M5X265_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025660mg PE=3 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 5.5e-40
Identity = 86/161 (53.42%), Postives = 108/161 (67.08%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI--------- 60
           ++RGS+D+IG+NHYSTLY KDC+HS C S     PI GFL TT  RD + I         
Sbjct: 322 LLRGSIDFIGVNHYSTLYVKDCIHSPCPSGGD-RPIMGFLNTTGYRDGVPIGEPAWRRSI 381

Query: 61  -------RDLVRYSPSNGDSDKV-EDILNDTKRINYHKNYLASLAKATRNGGDVRGYFVW 120
                   ++  +   NG + +  E+ L D  RIN+H++YLASL +A R+G DVRGYFVW
Sbjct: 382 DYVKQRYNNMPMFVTENGCTLQTQENELEDRDRINFHRSYLASLVRAIRSGADVRGYFVW 441

Query: 121 SLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           S+MDNFEW NGYTK +GL+YVDR TL+R PKLSA WFAS L
Sbjct: 442 SVMDNFEWLNGYTKRFGLYYVDRETLERTPKLSAGWFASFL 481

[Close]
BLAST of Lsi04G013060 vs. TrEMBL
Match: A0A151REA9_CAJCA (Beta-glucosidase 44 (Fragment) OS=Cajanus cajan GN=KK1_037673 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.4e-38
Identity = 88/178 (49.44%), Postives = 108/178 (60.67%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----- 60
           +I+GSLD+IGINHY T+Y KDC  S+C      HP+ GFLETT +RD I I DL      
Sbjct: 155 LIKGSLDFIGINHYGTVYAKDCSLSSCPLGVD-HPLSGFLETTGTRDGIPIGDLTGMSGF 214

Query: 61  -----------------------RYSPSNGDS------DKVEDILNDTKRINYHKNYLAS 120
                                   Y   NG S      + ++D+L D KRI+YHK YLA+
Sbjct: 215 FVVPRGMEKLVEYIKIRYHNNIPMYITENGYSSPPKPDETMDDLLQDFKRIDYHKAYLAA 274

Query: 121 LAKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           L +A R G DVRGY +WSLMDNFEWA+GY   +GL+YVDRHTL+R PKLS QWF+S L
Sbjct: 275 LLRAIRKGADVRGYMIWSLMDNFEWASGYDIRFGLYYVDRHTLERIPKLSVQWFSSFL 331

[Close]
BLAST of Lsi04G013060 vs. TAIR10
Match: AT4G21760.1 (AT4G21760.1 beta-glucosidase 47)

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-28
Identity = 59/160 (36.88%), Postives = 91/160 (56.88%), Query Frame = 1 

Query: 3   RGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISI----------- 62
           + +LD+IGIN Y++ Y KDCLHS C         +GF+   + +D + +           
Sbjct: 352 KNALDFIGINQYTSRYAKDCLHSVCEPGKGGSRAEGFVYANALKDGLRLGEPVGMEEMLM 411

Query: 63  ------RDLVRYSPSNGDSDKVEDIL-NDTKRINYHKNYLASLAKATRNGGDVRGYFVWS 122
                 +++  Y   NG  +    +L ND +R+ +  NYL +L +A R G DVRGYF WS
Sbjct: 412 YATERYKNITLYVTENGFGENNTGVLLNDYQRVKFMSNYLDALKRAMRKGADVRGYFAWS 471

Query: 123 LMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLL 145
           L+DNFEW +GYT  +G+++VD  T +R P+LSA W+ + +
Sbjct: 472 LLDNFEWISGYTIRFGMYHVDFSTQERTPRLSASWYKNFI 511

[Close]
BLAST of Lsi04G013060 vs. TAIR10
Match: AT1G61820.1 (AT1G61820.1 beta glucosidase 46)

HSP 1 Score: 111.3 bits (277), Expect = 5.8e-25
Identity = 62/175 (35.43%), Postives = 89/175 (50.86%), Query Frame = 1 

Query: 7   DYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLV----------- 66
           D++GINHY++ + +DCL + C+S       +G       + ++SI +L            
Sbjct: 334 DFLGINHYTSYFIQDCLITACNSGDGASKSEGLALKLDRKGNVSIGELTDVNWQHIDPNG 393

Query: 67  ----------------RYSPSNG------DSDKVEDILNDTKRINYHKNYLASLAKATRN 126
                            Y   NG          VE++L+DTKRI Y   YL +L  A R+
Sbjct: 394 FRKMLNYLKNRYHNIPMYITENGFGQLQKPETTVEELLHDTKRIQYLSGYLDALKAAMRD 453

Query: 127 GGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGNL 149
           G +V+GYF WSL+DNFEW  GY   +GLF+VD  TLKR PK SA W+ + +  N+
Sbjct: 454 GANVKGYFAWSLLDNFEWLYGYKVRFGLFHVDFTTLKRTPKQSATWYKNFIEQNV 508

[Close]
BLAST of Lsi04G013060 vs. TAIR10
Match: AT5G54570.1 (AT5G54570.1 beta glucosidase 41)

HSP 1 Score: 106.7 bits (265), Expect = 1.4e-23
Identity = 70/205 (34.15%), Postives = 110/205 (53.66%), Query Frame = 1 

Query: 2   IRGSLDYIGINHYSTLYTKD-------CLHSNCSSEASYHPIQGFLETTSSRDDISI--- 61
           I+G+ DY+GINHY+TLY ++        +  + SS+++       + T+S R  ++I   
Sbjct: 328 IKGAFDYVGINHYTTLYARNDRTRIRKLILQDASSDSA-------VITSSFRGGVAIGER 387

Query: 62  --------------------RDLVRYSP----SNGDSDK------VEDILNDTKRINYHK 121
                               +D+    P     NG  +K      +E  L D KRI +H+
Sbjct: 388 AGSSWLHIVPWGIRKLAVYVKDIYGNPPVFITENGMDEKNSPFIDMEKALKDDKRIGFHR 447

Query: 122 NYLASLAKATRNGG-DVRGYFVWSLMDNFEWANGYTKGYGLFYVD-RHTLKRRPKLSAQW 165
           +YL++L+ A RN   DVRGYFVWSL+DN+EW +GYT  +G++YVD ++ L R PK SA+W
Sbjct: 448 DYLSNLSAAIRNDECDVRGYFVWSLLDNWEWNSGYTVRFGIYYVDYKNNLTRIPKASARW 507

[Close]
BLAST of Lsi04G013060 vs. TAIR10
Match: AT1G26560.1 (AT1G26560.1 beta glucosidase 40)

HSP 1 Score: 104.8 bits (260), Expect = 5.5e-23
Identity = 67/179 (37.43%), Postives = 91/179 (50.84%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKD--------CLHSNCSSEASYH-PIQGFLETTSSRDDI-- 60
           +++GSLD++GINHY+T Y ++         LH   S   +   P +G          I  
Sbjct: 328 LVKGSLDFVGINHYTTYYARNNATNLIGTLLHDAVSDSGTVTLPFKGLSTIGDRASSIWL 387

Query: 61  -----SIRDLVRYSP-----------SNGDSD------KVEDILNDTKRINYHKNYLASL 120
                 +R L+ Y              NG  D        +D L D KRI YH +YL+SL
Sbjct: 388 YIVPRGMRSLMNYIKHRYGNPPVFITENGMDDPNSILISRKDALKDAKRIKYHHDYLSSL 447

Query: 121 -AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVD-RHTLKRRPKLSAQWFASLL 145
            A    +G +V+GYFVWSL+DN+EWA GY+  +GL++VD R  LKR PK S  WF S L
Sbjct: 448 QASIKEDGCNVKGYFVWSLLDNWEWAAGYSSRFGLYFVDYRDNLKRYPKDSVHWFTSFL 506

[Close]
BLAST of Lsi04G013060 vs. TAIR10
Match: AT5G36890.1 (AT5G36890.1 beta glucosidase 42)

HSP 1 Score: 104.0 bits (258), Expect = 9.3e-23
Identity = 64/187 (34.22%), Postives = 99/187 (52.94%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQ----------GFLETTSSRDDI- 60
           M++ S D++G+NHY++        SN  +E++++  Q          G L    +  D  
Sbjct: 304 MLQNSWDFLGLNHYTSRLISHV--SNKEAESNFYQAQELERIVELENGDLIGERAASDWL 363

Query: 61  -----SIRDLVRYSPS-----------NGDSDK------VEDILNDTKRINYHKNYLASL 120
                 IR  + Y              NG  D+      + D+L+D +R++Y K+YLA++
Sbjct: 364 YAVPWGIRKTLNYMSKKYNHPPIFITENGMDDEDDGSASIHDMLDDKRRVDYFKSYLANV 423

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVD-RHTLKRRPKLSAQWFASLLGG 154
           ++A  +G D++GYF WSL+DNFEWA GYTK +GL YVD ++ L R PK SA WF   L G
Sbjct: 424 SQAIEDGVDIKGYFAWSLLDNFEWAQGYTKRFGLVYVDYKNGLTRHPKSSAYWFMKFLKG 483

[Close]
BLAST of Lsi04G013060 vs. NCBI nr
Match: gi|449447219|ref|XP_004141366.1| (PREDICTED: beta-glucosidase 18-like [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 1.1e-46
Identity = 105/200 (52.50%), Postives = 125/200 (62.50%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEASYHPIQGFLETTSSRDDISIRDLVR---- 60
           +I+GSLDYI +NHY+TLY KDCLHS CS+     PI+GFL+T   R+ +SI D       
Sbjct: 326 IIKGSLDYICVNHYTTLYAKDCLHSPCSNGGD-RPIKGFLDTMGYRNSVSIGDPTGMDRF 385

Query: 61  -----------------------------YSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                                        YS    D +KVEDI+NDTKR+N+H+NYLASL
Sbjct: 386 FVVPRGLEKTINYINQRYPNKPIFVTENGYSTPPSDGNKVEDIINDTKRVNFHRNYLASL 445

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 168
            +A RNG DVRGYFVWSLMDN EW +G+   +GL YVD  TL+RRPKLSA WFASLLGGN
Sbjct: 446 VRAMRNGADVRGYFVWSLMDNLEWIHGFNTRFGLVYVDFQTLERRPKLSAHWFASLLGGN 505

[Close]
BLAST of Lsi04G013060 vs. NCBI nr
Match: gi|659109407|ref|XP_008454703.1| (PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo])

HSP 1 Score: 182.2 bits (461), Expect = 7.6e-43
Identity = 96/201 (47.76%), Postives = 125/201 (62.19%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCS-----------SEASYHP-------------- 60
           +IRGSLD++ +NHY+T YTKDCLHS CS           +  +Y                
Sbjct: 280 IIRGSLDFVCVNHYTTFYTKDCLHSPCSDGGDHAITGYLNTTAYRDGVSIGDPTGIDVFF 339

Query: 61  --------IQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   +  +++       I + +   YS    + + VED++ DTKR+NYHK+YLASL
Sbjct: 340 VVPRGLGKVINYIKERYPNKPIFVTEN-GYSMPQAEGNNVEDLIKDTKRVNYHKDYLASL 399

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           AKA R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 400 AKAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 459

[Close]
BLAST of Lsi04G013060 vs. NCBI nr
Match: gi|659105305|ref|XP_008453064.1| (PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 1.7e-42
Identity = 95/192 (49.48%), Postives = 118/192 (61.46%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCSSEA----------------------------- 60
           +I+GSLDYI +NHY+TLYTKDCLHS CS+                               
Sbjct: 345 IIKGSLDYICVNHYTTLYTKDCLHSPCSNGGDRPIKGFLDTTGYRDSVSIGDPTGVDRFF 404

Query: 61  ----SYHPIQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   I  ++      + I + +   YS    D   +EDI+NDTKR+N+HKNYLASL
Sbjct: 405 VVPRGLEKIINYIRQRYPNNPIVVTEN-GYSMPPSDGKTLEDIINDTKRVNFHKNYLASL 464

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 160
            +A RNG DVRGYFVWSLMDNFEW +G+T  +GL+YVD  TL+RRPKLSA WFAS LGGN
Sbjct: 465 VRAMRNGADVRGYFVWSLMDNFEWIDGFTTRFGLWYVDFQTLERRPKLSAHWFASFLGGN 524

[Close]
BLAST of Lsi04G013060 vs. NCBI nr
Match: gi|778686428|ref|XP_011652390.1| (PREDICTED: beta-glucosidase 18 isoform X1 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 5.5e-41
Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCS-----------SEASYHP-------------- 60
           +IRGSLD+I +NHY+T YTKDCLHS C            +  +Y                
Sbjct: 360 IIRGSLDFICVNHYTTFYTKDCLHSACFGGGNHPVTGYLNTTAYRDGVSIGDPTGIDVFF 419

Query: 61  --------IQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   +  +++       I + +   YS    + ++ E ++ DTKR+NYHKNYLASL
Sbjct: 420 VVPRGLGKVINYIKERYPNKPIFVTEN-GYSSPQSEGNETEVLIKDTKRVNYHKNYLASL 479

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A A R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 480 ANAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 539

[Close]
BLAST of Lsi04G013060 vs. NCBI nr
Match: gi|700204767|gb|KGN59900.1| (hypothetical protein Csa_3G852490 [Cucumis sativus])

HSP 1 Score: 176.0 bits (445), Expect = 5.5e-41
Identity = 94/201 (46.77%), Postives = 122/201 (60.70%), Query Frame = 1 

Query: 1   MIRGSLDYIGINHYSTLYTKDCLHSNCS-----------SEASYHP-------------- 60
           +IRGSLD+I +NHY+T YTKDCLHS C            +  +Y                
Sbjct: 345 IIRGSLDFICVNHYTTFYTKDCLHSACFGGGNHPVTGYLNTTAYRDGVSIGDPTGIDVFF 404

Query: 61  --------IQGFLETTSSRDDISIRDLVRYSPSNGDSDKVEDILNDTKRINYHKNYLASL 120
                   +  +++       I + +   YS    + ++ E ++ DTKR+NYHKNYLASL
Sbjct: 405 VVPRGLGKVINYIKERYPNKPIFVTEN-GYSSPQSEGNETEVLIKDTKRVNYHKNYLASL 464

Query: 121 AKATRNGGDVRGYFVWSLMDNFEWANGYTKGYGLFYVDRHTLKRRPKLSAQWFASLLGGN 169
           A A R+G DVRGYFVWSL+DNFEWA+GY   +GL YVDR TL+RRPKLSA WF+S LGGN
Sbjct: 465 ANAMRDGADVRGYFVWSLIDNFEWADGYDTRFGLLYVDRKTLERRPKLSAHWFSSFLGGN 524

The following BLAST results are available for this feature:
BLAST of Lsi04G013060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BGL47_ARATH4.5e-2736.88Beta-glucosidase 47 OS=Arabidopsis thaliana GN=BGLU47 PE=3 SV=2[more]
BGL14_ORYSJ5.0e-2639.20Probable inactive beta-glucosidase 14 OS=Oryza sativa subsp. japonica GN=BGLU14 ... [more]
BGL15_ORYSJ1.9e-2534.09Putative beta-glucosidase 15 OS=Oryza sativa subsp. japonica GN=BGLU15 PE=5 SV=2[more]
BGL16_ORYSJ7.9e-2434.52Beta-glucosidase 16 OS=Oryza sativa subsp. japonica GN=BGLU16 PE=3 SV=2[more]
BGL46_ARATH1.0e-2335.43Beta-glucosidase 46 OS=Arabidopsis thaliana GN=BGLU46 PE=1 SV=2[more]
BLAST of Lsi04G013060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L4S1_CUCSA7.9e-4752.50Uncharacterized protein OS=Cucumis sativus GN=Csa_4G638400 PE=3 SV=1[more]
A0A0A0LD30_CUCSA3.8e-4146.77Uncharacterized protein OS=Cucumis sativus GN=Csa_3G852490 PE=3 SV=1[more]
K4GMG6_CUCSA3.8e-4146.77Beta-glucosidase (Fragment) OS=Cucumis sativus GN=BG1 PE=2 SV=1[more]
M5X265_PRUPE5.5e-4053.42Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025660mg PE=3 SV=1[more]
A0A151REA9_CAJCA1.4e-3849.44Beta-glucosidase 44 (Fragment) OS=Cajanus cajan GN=KK1_037673 PE=3 SV=1[more]
BLAST of Lsi04G013060 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G21760.12.5e-2836.88 beta-glucosidase 47[more]
AT1G61820.15.8e-2535.43 beta glucosidase 46[more]
AT5G54570.11.4e-2334.15 beta glucosidase 41[more]
AT1G26560.15.5e-2337.43 beta glucosidase 40[more]
AT5G36890.19.3e-2334.22 beta glucosidase 42[more]
BLAST of Lsi04G013060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449447219|ref|XP_004141366.1|1.1e-4652.50PREDICTED: beta-glucosidase 18-like [Cucumis sativus][more]
gi|659109407|ref|XP_008454703.1|7.6e-4347.76PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo][more]
gi|659105305|ref|XP_008453064.1|1.7e-4249.48PREDICTED: beta-glucosidase 18-like, partial [Cucumis melo][more]
gi|778686428|ref|XP_011652390.1|5.5e-4146.77PREDICTED: beta-glucosidase 18 isoform X1 [Cucumis sativus][more]
gi|700204767|gb|KGN59900.1|5.5e-4146.77hypothetical protein Csa_3G852490 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
Vocabulary: INTERPRO
TermDefinition
IPR017853Glycoside_hydrolase_SF
IPR013781Glycoside hydrolase, catalytic domain
IPR001360Glyco_hydro_1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G013060.1Lsi04G013060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001360Glycoside hydrolase family 1PRINTSPR00131GLHYDRLASE1coord: 5..19
score: 9.7E-17coord: 94..111
score: 9.7E-17coord: 118..130
score: 9.7E-17coord: 73..84
score: 9.7
IPR001360Glycoside hydrolase family 1PANTHERPTHR10353GLYCOSYL HYDROLASEcoord: 1..144
score: 3.3
IPR001360Glycoside hydrolase family 1PFAMPF00232Glyco_hydro_1coord: 64..144
score: 9.4
IPR013781Glycoside hydrolase, catalytic domainGENE3DG3DSA:3.20.20.80coord: 1..150
score: 3.8
IPR017853Glycoside hydrolase superfamilyunknownSSF51445(Trans)glycosidasescoord: 2..147
score: 1.23
NoneNo IPR availablePANTHERPTHR10353:SF42SUBFAMILY NOT NAMEDcoord: 1..144
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G013060Cla97C11G224340Watermelon (97103) v2lsiwmbB272
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G013060Cucumber (Gy14) v2cgyblsiB046
Lsi04G013060Cucumber (Gy14) v2cgyblsiB271
Lsi04G013060Melon (DHL92) v3.6.1lsimedB304
Lsi04G013060Melon (DHL92) v3.6.1lsimedB333
Lsi04G013060Silver-seed gourdcarlsiB284
Lsi04G013060Silver-seed gourdcarlsiB613
Lsi04G013060Silver-seed gourdcarlsiB825
Lsi04G013060Cucumber (Chinese Long) v3cuclsiB056
Lsi04G013060Cucumber (Chinese Long) v3cuclsiB314
Lsi04G013060Watermelon (97103) v2lsiwmbB264
Lsi04G013060Watermelon (97103) v2lsiwmbB278
Lsi04G013060Wax gourdlsiwgoB398
Lsi04G013060Bottle gourd (USVL1VR-Ls)lsilsiB098
Lsi04G013060Bottle gourd (USVL1VR-Ls)lsilsiB136
Lsi04G013060Cucumber (Gy14) v1cgylsiB187
Lsi04G013060Cucumber (Gy14) v1cgylsiB196
Lsi04G013060Cucumber (Gy14) v1cgylsiB553
Lsi04G013060Cucurbita maxima (Rimu)cmalsiB026
Lsi04G013060Cucurbita maxima (Rimu)cmalsiB217
Lsi04G013060Cucurbita maxima (Rimu)cmalsiB382
Lsi04G013060Cucurbita maxima (Rimu)cmalsiB426
Lsi04G013060Cucurbita maxima (Rimu)cmalsiB685
Lsi04G013060Cucurbita moschata (Rifu)cmolsiB014
Lsi04G013060Cucurbita moschata (Rifu)cmolsiB205
Lsi04G013060Cucurbita moschata (Rifu)cmolsiB367
Lsi04G013060Cucurbita moschata (Rifu)cmolsiB414
Lsi04G013060Cucurbita moschata (Rifu)cmolsiB678
Lsi04G013060Cucurbita pepo (Zucchini)cpelsiB034
Lsi04G013060Cucurbita pepo (Zucchini)cpelsiB464
Lsi04G013060Cucurbita pepo (Zucchini)cpelsiB640
Lsi04G013060Wild cucumber (PI 183967)cpilsiB051
Lsi04G013060Wild cucumber (PI 183967)cpilsiB293
Lsi04G013060Cucumber (Chinese Long) v2culsiB050
Lsi04G013060Cucumber (Chinese Long) v2culsiB293
Lsi04G013060Melon (DHL92) v3.5.1lsimeB290
Lsi04G013060Melon (DHL92) v3.5.1lsimeB312
Lsi04G013060Watermelon (Charleston Gray)lsiwcgB265
Lsi04G013060Watermelon (Charleston Gray)lsiwcgB277
Lsi04G013060Watermelon (97103) v1lsiwmB299
Lsi04G013060Watermelon (97103) v1lsiwmB340