Lsi04G012880 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G012880
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Late embryogenesis abundant (LEA) protein-related
Location	chr04 : 20303266 .. 20304690 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGAACAGTTCATTTTCTTCAAGAGTACTTAATTGTCTGGGAAAATGCCCACTTTCCCACTCAATGGATTTTATAAAAGATAGAAGGAAAACCTGTGTTTGACCATAACAAGTCTTTGGCTGCCATTGAAGAAGCTCAGGTGATAATGGGGAGATTTAGCATAAATGAAATGTCCATCATTCTTCTGGTGTTCATGTCTGGTTTGTTGCAGATCCATGCTGCCGATACGTTAACTTGTTACAGGAGCAACAGCCCGTGTCGTTTCAAGCAGATGCGTTGCCCAGCAGAATGCCCATCAAAATCACCATCAAACCATACTGACAAAGTTTGTTACGTTAACTGCGAATCGCCTGTATGCAAAGCAGAGTGCAAAAGTAAGGCTGGATAATGATGATTTCAATGATGTATGAGATGTAAAGTTTCTTTTAGGAATAACTTATTTGTTTTTGTGCCACAATGACAGGTTCAAAACCAAACTGTAATGGTCCTGGGTCGGCATGCTTGGACCCGAGGTTCATTGGTGCTGATGGTATTGTGTTCTACTTCCATGGAAAAAGCAATGAACACTTCAGCTTAGTATCTGATCCCGACCTGCAAATCAATGCGCGGTTCATTGGACTAAGGCCTGCAGGCAGATCCAGGGACTTCACATGGATTCAAGCACTTGGTTTCCTCTTCAATTCTCACTCCTTCTCACTTGAGGCCAAGCGAGCAGCAACATGGGACAACAAAGTCGATCACTTAGAATTCACTTACGATGGAAAAGAAGTAGTCATACCAGATGGTTTTCTCTCGCAATGGAGGTCCTCAAAAAGCAATATTATAGTTCAAAGAACATCAACCAGCAACAGTGTCTTGGTTACTCTCCCTGAGATAGCAGAGATATCAGTTAACGTTGTACCGATTACTAAAGAAGACGATAGAATTCATAAATATCAGATACCAGAAGATGACTGTTTTGCTCACTTGGAAGTCCAGTTCAGATTCCACGGCCTCTCATCGAAGGTTGAAGGAGTGCTTGGAAGGACTTATCAGCCTGACTTTATGAACCCTGCAAAGCCAGGAGTTGCAATGCCTGTTTTAGGAGGTGACAAGGAGTACAGGACCTCATCGCTCCTCTCAGCCGATTGCAGTGCTTGTTTGTTTTCCCCTGCCAGAATCTCAAACAAAGTGGACCCAAAGATAATGCAATATAGCTTCATAGACTGCTCTGGAGGAAGCACAAGTGGAAATGGAATAGTTTGCAGAAAATAAAGCATAATAACCAGAACCAAGTCATACTAAACATTGAATAACGAAGCTTTTGCTTCACACTGTCTAATAGTCTTCTCTCATGGAGAGTTTAACTGGTTGTCTTCTGTTGTGTGAAAGCGTTTCTACTTTTGGGTGAATCTTGCAGTATCTTAGTATTCAGTTTTGTCAA

mRNA sequence

AATGGAACAGTTCATTTTCTTCAAGAGTACTTAATTGTCTGGGAAAATGCCCACTTTCCCACTCAATGGATTTTATAAAAGATAGAAGGAAAACCTGTGTTTGACCATAACAAGTCTTTGGCTGCCATTGAAGAAGCTCAGGTGATAATGGGGAGATTTAGCATAAATGAAATGTCCATCATTCTTCTGGTGTTCATGTCTGGTTTGTTGCAGATCCATGCTGCCGATACGTTAACTTGTTACAGGAGCAACAGCCCGTGTCGTTTCAAGCAGATGCGTTGCCCAGCAGAATGCCCATCAAAATCACCATCAAACCATACTGACAAAGTTTGTTACGTTAACTGCGAATCGCCTGTATGCAAAGCAGAGTGCAAAAGTTCAAAACCAAACTGTAATGGTCCTGGGTCGGCATGCTTGGACCCGAGGTTCATTGGTGCTGATGGTATTGTGTTCTACTTCCATGGAAAAAGCAATGAACACTTCAGCTTAGTATCTGATCCCGACCTGCAAATCAATGCGCGGTTCATTGGACTAAGGCCTGCAGGCAGATCCAGGGACTTCACATGGATTCAAGCACTTGGTTTCCTCTTCAATTCTCACTCCTTCTCACTTGAGGCCAAGCGAGCAGCAACATGGGACAACAAAGTCGATCACTTAGAATTCACTTACGATGGAAAAGAAGTAGTCATACCAGATGGTTTTCTCTCGCAATGGAGGTCCTCAAAAAGCAATATTATAGTTCAAAGAACATCAACCAGCAACAGTGTCTTGGTTACTCTCCCTGAGATAGCAGAGATATCAGTTAACGTTGTACCGATTACTAAAGAAGACGATAGAATTCATAAATATCAGATACCAGAAGATGACTGTTTTGCTCACTTGGAAGTCCAGTTCAGATTCCACGGCCTCTCATCGAAGGTTGAAGGAGTGCTTGGAAGGACTTATCAGCCTGACTTTATGAACCCTGCAAAGCCAGGAGTTGCAATGCCTGTTTTAGGAGGTGACAAGGAGTACAGGACCTCATCGCTCCTCTCAGCCGATTGCAGTGCTTGTTTGTTTTCCCCTGCCAGAATCTCAAACAAAGTGGACCCAAAGATAATGCAATATAGCTTCATAGACTGCTCTGGAGGAAGCACAAGTGGAAATGGAATAGTTTGCAGAAAATAAAGCATAATAACCAGAACCAAGTCATACTAAACATTGAATAACGAAGCTTTTGCTTCACACTGTCTAATAGTCTTCTCTCATGGAGAGTTTAACTGGTTGTCTTCTGTTGTGTGAAAGCGTTTCTACTTTTGGGTGAATCTTGCAGTATCTTAGTATTCAGTTTTGTCAA

Coding sequence (CDS)

ATGGGGAGATTTAGCATAAATGAAATGTCCATCATTCTTCTGGTGTTCATGTCTGGTTTGTTGCAGATCCATGCTGCCGATACGTTAACTTGTTACAGGAGCAACAGCCCGTGTCGTTTCAAGCAGATGCGTTGCCCAGCAGAATGCCCATCAAAATCACCATCAAACCATACTGACAAAGTTTGTTACGTTAACTGCGAATCGCCTGTATGCAAAGCAGAGTGCAAAAGTTCAAAACCAAACTGTAATGGTCCTGGGTCGGCATGCTTGGACCCGAGGTTCATTGGTGCTGATGGTATTGTGTTCTACTTCCATGGAAAAAGCAATGAACACTTCAGCTTAGTATCTGATCCCGACCTGCAAATCAATGCGCGGTTCATTGGACTAAGGCCTGCAGGCAGATCCAGGGACTTCACATGGATTCAAGCACTTGGTTTCCTCTTCAATTCTCACTCCTTCTCACTTGAGGCCAAGCGAGCAGCAACATGGGACAACAAAGTCGATCACTTAGAATTCACTTACGATGGAAAAGAAGTAGTCATACCAGATGGTTTTCTCTCGCAATGGAGGTCCTCAAAAAGCAATATTATAGTTCAAAGAACATCAACCAGCAACAGTGTCTTGGTTACTCTCCCTGAGATAGCAGAGATATCAGTTAACGTTGTACCGATTACTAAAGAAGACGATAGAATTCATAAATATCAGATACCAGAAGATGACTGTTTTGCTCACTTGGAAGTCCAGTTCAGATTCCACGGCCTCTCATCGAAGGTTGAAGGAGTGCTTGGAAGGACTTATCAGCCTGACTTTATGAACCCTGCAAAGCCAGGAGTTGCAATGCCTGTTTTAGGAGGTGACAAGGAGTACAGGACCTCATCGCTCCTCTCAGCCGATTGCAGTGCTTGTTTGTTTTCCCCTGCCAGAATCTCAAACAAAGTGGACCCAAAGATAATGCAATATAGCTTCATAGACTGCTCTGGAGGAAGCACAAGTGGAAATGGAATAGTTTGCAGAAAATAA

Protein sequence

MGRFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK

Homology

[Close]

BLAST of Lsi04G012880 vs. TrEMBL
Match: A0A0A0LIM8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851860 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 2.5e-185
Identity = 311/339 (91.74%), Postives = 329/339 (97.05%), Query Frame = 1


Query: 1   MGRFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDK 60
           MGRF+ +E+SI+LLVFMSGLLQIH ADTLTCY+SNSPCRFKQMRCPAECPSKSPSNHT K
Sbjct: 3   MGRFNRHEISILLLVFMSGLLQIHGADTLTCYKSNSPCRFKQMRCPAECPSKSPSNHTHK 62

Query: 61  VCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 120
           VCYVNCESPVCKA CKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL
Sbjct: 63  VCYVNCESPVCKAGCKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 122

Query: 121 QINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVV 180
           QINARFIG+RPAGRSRDFTWIQALGFLFNSHSFSL+AKRAATWD KVDHL+FTY+G EVV
Sbjct: 123 QINARFIGIRPAGRSRDFTWIQALGFLFNSHSFSLQAKRAATWDEKVDHLKFTYNGNEVV 182

Query: 181 IPDGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDD 240
           IPDG LSQW+SS+SNI+VQRTS SNSVL+TLPEIAEISVNVVPITKEDDRIH Y+IP+DD
Sbjct: 183 IPDGHLSQWKSSESNIMVQRTSNSNSVLLTLPEIAEISVNVVPITKEDDRIHNYRIPKDD 242

Query: 241 CFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCS 300
           CFAHLEVQFRFHGLSSKVEGVLGRTYQPDF+NPAKPGVAMPV+GGDKEYRTSSLLSADCS
Sbjct: 243 CFAHLEVQFRFHGLSSKVEGVLGRTYQPDFINPAKPGVAMPVVGGDKEYRTSSLLSADCS 302

Query: 301 ACLFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           ACLFSPARISNKVDPK+ QYSFIDCSGGSTSGNGIVCRK
Sbjct: 303 ACLFSPARISNKVDPKMRQYSFIDCSGGSTSGNGIVCRK 341

[Close]

BLAST of Lsi04G012880 vs. TrEMBL
Match: V4TX84_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010209mg PE=4 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 5.7e-137
Identity = 226/337 (67.06%), Postives = 285/337 (84.57%), Query Frame = 1


Query: 3   RFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVC 62
           + S + + I LL+ +S L+Q +A +TLTC    SPC  K+M CPA+CPS+SP + T KVC
Sbjct: 2   KVSCSSLLIALLILISVLVQTNA-ETLTCTSRRSPCFLKKMTCPAQCPSRSPKDPTAKVC 61

Query: 63  YVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQI 122
           Y++C SP+CK ECK  KPNC+G G+ACLDPRFIG DGIVFYFHGKSNEH++LVSD +LQI
Sbjct: 62  YIDCNSPICKTECKKRKPNCSGTGAACLDPRFIGGDGIVFYFHGKSNEHYTLVSDFNLQI 121

Query: 123 NARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIP 182
           N+RFIGLRP GR+RD+TWIQALGFLFNS +FSLEA +AATWD+++DHL+F+ + +E+VIP
Sbjct: 122 NSRFIGLRPEGRTRDYTWIQALGFLFNSQTFSLEATKAATWDDEIDHLKFSSNREELVIP 181

Query: 183 DGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCF 242
           +G LS W+S +SN+ V+RTS  NSV++TLP++AEISVNVVP+TKED+RIH YQIP DDCF
Sbjct: 182 EGHLSSWQSPESNLRVERTSNKNSVVITLPDVAEISVNVVPVTKEDNRIHNYQIPSDDCF 241

Query: 243 AHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSAC 302
           AHLEVQFRF+GLSSKVEGVLGRTYQPDF NPAKPGVAMPV+GG+ +YRT+SLLSA+C +C
Sbjct: 242 AHLEVQFRFYGLSSKVEGVLGRTYQPDFKNPAKPGVAMPVVGGEDKYRTTSLLSANCKSC 301

Query: 303 LFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           +FSPA + ++ D  +M Y  +DC+G + SGNGIVCRK
Sbjct: 302 IFSPAGVLDQKDALVMDYGTLDCTGSAISGNGIVCRK 337

[Close]

BLAST of Lsi04G012880 vs. TrEMBL
Match: E0CSR0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03410 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 1.3e-136
Identity = 233/335 (69.55%), Postives = 278/335 (82.99%), Query Frame = 1


Query: 5   SINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYV 64
           S N + IILL F++G+ QI A ++ TC   NSPC  K++ CP+ECP+ S +N   KVCY+
Sbjct: 5   SSNCLLIILLCFVAGVTQIDA-ESRTCTNRNSPCFLKRITCPSECPTSSSTNSKAKVCYI 64

Query: 65  NCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINA 124
           NC SP+C+AECK+ K NCN PG+ACLDPRFIG DGIVFYFHGK NEHFSLVSD +LQINA
Sbjct: 65  NCNSPLCQAECKNRKANCNSPGAACLDPRFIGGDGIVFYFHGKRNEHFSLVSDLNLQINA 124

Query: 125 RFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDG 184
            FIGLRPAGR+RD+TWIQALG L +SHSFSLEA RA  WD+++DHL+F+YDGKE+ IP+G
Sbjct: 125 HFIGLRPAGRTRDYTWIQALGILVDSHSFSLEATRAVAWDDEIDHLKFSYDGKELDIPEG 184

Query: 185 FLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAH 244
            LS W  S++++ V+RTS  NSV+VTLPEIAEI VNVVPITKEDDRIH YQIP DDCFAH
Sbjct: 185 HLSAWNFSENDLKVERTSNRNSVVVTLPEIAEILVNVVPITKEDDRIHNYQIPSDDCFAH 244

Query: 245 LEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLF 304
           LEVQFRF GLSSKVEGVLG+TYQPDF NP KPGVAMPV+GG+ +YRT+SLLSADC +CLF
Sbjct: 245 LEVQFRFFGLSSKVEGVLGQTYQPDFENPVKPGVAMPVVGGEDKYRTTSLLSADCRSCLF 304

Query: 305 SPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           SPA + ++ D  IM Y  +DC+GG+TSG GIVCRK
Sbjct: 305 SPAGVFDQKDTLIMDYGTLDCTGGATSGMGIVCRK 338

[Close]

BLAST of Lsi04G012880 vs. TrEMBL
Match: A0A067GFT6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042767mg PE=4 SV=1)

HSP 1 Score: 493.0 bits (1268), Expect = 2.8e-136
Identity = 226/337 (67.06%), Postives = 284/337 (84.27%), Query Frame = 1


Query: 3   RFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVC 62
           + S + + I LL+ +S L+Q +A +TLTC    SPC  K+M CPA+CPS+SP + T KVC
Sbjct: 2   KVSCSSLLIALLILISVLVQTNA-ETLTCTSRRSPCFLKKMTCPAQCPSRSPKDPTAKVC 61

Query: 63  YVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQI 122
           Y++C SP+CK ECK  KPNC+G G+ACLDPRFIG DGIVFYFHGKSNEH++LVSD +LQI
Sbjct: 62  YIDCNSPICKTECKKRKPNCSGTGAACLDPRFIGGDGIVFYFHGKSNEHYTLVSDFNLQI 121

Query: 123 NARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIP 182
           N+RFIGLRP GR+RD TWIQALGFLFNS +FSLEA +AATWD+++DHL+F+ + +E+VIP
Sbjct: 122 NSRFIGLRPEGRTRDNTWIQALGFLFNSQTFSLEATKAATWDDEIDHLKFSSNREELVIP 181

Query: 183 DGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCF 242
           +G LS W+S +SN+ V+RTS  NSV++TLP++AEISVNVVP+TKED+RIH YQIP DDCF
Sbjct: 182 EGHLSSWQSPESNLRVERTSNKNSVVITLPDVAEISVNVVPVTKEDNRIHNYQIPSDDCF 241

Query: 243 AHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSAC 302
           AHLEVQFRF+GLSSKVEGVLGRTYQPDF NPAKPGVAMPV+GG+ +YRT+SLLSA+C +C
Sbjct: 242 AHLEVQFRFYGLSSKVEGVLGRTYQPDFKNPAKPGVAMPVVGGEDKYRTTSLLSANCKSC 301

Query: 303 LFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           +FSPA + ++ D  +M Y  +DC+G + SGNGIVCRK
Sbjct: 302 IFSPAGVLDQKDALVMDYGTLDCTGSAISGNGIVCRK 337

[Close]

BLAST of Lsi04G012880 vs. TrEMBL
Match: A0A061F803_THECC (Late embryogenesis abundant (LEA) protein-related OS=Theobroma cacao GN=TCM_031345 PE=4 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.4e-135
Identity = 230/342 (67.25%), Postives = 282/342 (82.46%), Query Frame = 1


Query: 1   MGRFSINEMSIILLVFMSGLLQIHAAD---TLTCYRSNSPCRFKQMRCPAECPSKSPSNH 60
           M  F  N  SIILL+ +  L++I A +   T TC+   S C  + MRCPA+CPS  PSN 
Sbjct: 1   MKAFCNNSYSIILLLLILALVKIDAQNRPVTTTCFSPRSRCFRRTMRCPAQCPSTRPSNP 60

Query: 61  TDKVCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSD 120
             KVCY NC+SP+C+AECK+ KPNCN PG+ACLDPRFIG DGIVFYFHGKSNEHFSLVSD
Sbjct: 61  GAKVCYFNCDSPICQAECKNRKPNCNAPGAACLDPRFIGGDGIVFYFHGKSNEHFSLVSD 120

Query: 121 PDLQINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGK 180
            +LQINARFIGLRPAGR+RD+TWIQALG LF + +FSLEAK  ATWD + DHL+F+Y+GK
Sbjct: 121 LNLQINARFIGLRPAGRTRDYTWIQALGVLFGTQTFSLEAKHTATWDEEFDHLKFSYNGK 180

Query: 181 EVVIPDGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIP 240
           ++VI DG LS W+S +S++ V+RTS  NSVLVTLPEIAEISVNVVP+T+EDDRIHKYQIP
Sbjct: 181 DIVIADGHLSSWQSPESDLKVERTSEKNSVLVTLPEIAEISVNVVPVTEEDDRIHKYQIP 240

Query: 241 EDDCFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSA 300
            ++ FAHLEVQF+F+GLSSKVEGVLGRTYQPDF+NPAKPGVAMPV+GG+  YRTSSLLSA
Sbjct: 241 SNNAFAHLEVQFKFYGLSSKVEGVLGRTYQPDFVNPAKPGVAMPVVGGEDNYRTSSLLSA 300

Query: 301 DCSACLFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           +C +C+FSPA + ++ D  +M +  +DC+ G++SG+GIVCR+
Sbjct: 301 ECRSCIFSPAGVLDQTDSLLMDFGTLDCTSGASSGSGIVCRR 342

[Close]

BLAST of Lsi04G012880 vs. TAIR10
Match: AT5G54370.1 (AT5G54370.1 Late embryogenesis abundant (LEA) protein-related)

HSP 1 Score: 431.8 bits (1109), Expect = 3.9e-121
Identity = 200/329 (60.79%), Postives = 251/329 (76.29%), Query Frame = 1


Query: 11  IILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYVNCESPV 70
           +I LV  +  LQ  AA    C    + C  K +RCP ECPSK+  N  +KVCY +C+ P 
Sbjct: 10  VISLVAATCFLQAKAAGVY-CSNPYTRCYRKYIRCPEECPSKTAMNSKNKVCYADCDRPT 69

Query: 71  CKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINARFIGLR 130
           CK++C+  KPNCN PGSAC DPRFIG DGIVFYFHGKSNE FSLVSD DLQIN RFIG R
Sbjct: 70  CKSQCRMRKPNCNRPGSACYDPRFIGGDGIVFYFHGKSNEEFSLVSDSDLQINGRFIGHR 129

Query: 131 PAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDGFLSQWR 190
           PAGR+RDFTWIQALGFLFNS+ FSLEA + A+WDN++DHL+F+YDG+++ +P+  LS W 
Sbjct: 130 PAGRARDFTWIQALGFLFNSNKFSLEAAKTASWDNEIDHLKFSYDGQDLSVPEETLSTWY 189

Query: 191 SSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAHLEVQFR 250
           S   +I ++R S  NSV+VT+ + AEI +NVVP+TKEDDRIH Y++P DDCFAHLEVQFR
Sbjct: 190 SPNKDIKIERVSMRNSVIVTIKDKAEIMINVVPVTKEDDRIHSYKVPSDDCFAHLEVQFR 249

Query: 251 FHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLFSPARIS 310
           F  LS KV+G+LGRTY+PDF NPAKPGVAMPV+GG+  ++TSSLLS DC  C+FS ++  
Sbjct: 250 FFNLSPKVDGILGRTYRPDFQNPAKPGVAMPVVGGEDSFKTSSLLSNDCKTCIFSESQAE 309

Query: 311 NKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
                  ++Y+ +DC+ G++SG GIVCRK
Sbjct: 310 IDSVKSEIEYATLDCTRGASSGYGIVCRK 337

[Close]

BLAST of Lsi04G012880 vs. TAIR10
Match: AT1G54890.1 (AT1G54890.1 Late embryogenesis abundant (LEA) protein-related)

HSP 1 Score: 424.5 bits (1090), Expect = 6.2e-119
Identity = 201/334 (60.18%), Postives = 258/334 (77.25%), Query Frame = 1


Query: 11  IILLVFMSGLLQIHAA-DTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYVNCESP 70
           +++L     ++Q+ AA +T TC++  SPC  K+  CP +CPS SP N + K C ++C +P
Sbjct: 14  VVMLYACIVVVQLEAALETKTCFQRKSPCFLKKQTCPKQCPSFSPPNGSTKACVIDCFNP 73

Query: 71  VCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINARFIGL 130
           +CKA C++ KPNCNG GSACLDPRFIG DGIVFYFHGK +EHF+L+SD D Q+NARFIGL
Sbjct: 74  ICKATCRNRKPNCNGKGSACLDPRFIGGDGIVFYFHGKRDEHFALISDVDFQVNARFIGL 133

Query: 131 RPAGRSRDFTWIQALGFLF--NSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDGFLS 190
           RP GR+RDFTWIQ+LG +F  NS +FSLEA +A  WD++VDHL  +Y+GKE+ +P G  S
Sbjct: 134 RPNGRARDFTWIQSLGLIFGPNSKTFSLEATKAEKWDHQVDHLRLSYEGKEISLPKGDTS 193

Query: 191 QWRSSKSNII-VQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAHLE 250
            W     + I ++RTS  NSVLVTL +IAEI +NVVP+TKEDD IHKY IPEDDCFAHLE
Sbjct: 194 VWSPPLGDYIKIERTSDINSVLVTLQDIAEIWINVVPVTKEDDIIHKYGIPEDDCFAHLE 253

Query: 251 VQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLFS- 310
           VQFRF  LSS VEGVLGRTY+ DF NPAKPGVAMPV+GG+ +YRT+SLL   C+AC++S 
Sbjct: 254 VQFRFLKLSSNVEGVLGRTYKEDFKNPAKPGVAMPVVGGEDKYRTASLLETSCNACVYSG 313

Query: 311 PARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
            +R  +K++P ++  + +DC+GGS+SG GI CRK
Sbjct: 314 GSRSLDKIEPLLLNQNTVDCTGGSSSGVGIFCRK 347

[Close]

BLAST of Lsi04G012880 vs. TAIR10
Match: AT4G27400.1 (AT4G27400.1 Late embryogenesis abundant (LEA) protein-related)

HSP 1 Score: 414.8 bits (1065), Expect = 5.0e-116
Identity = 198/337 (58.75%), Postives = 249/337 (73.89%), Query Frame = 1


Query: 7   NEMSIILLVFMSGLLQIHAADTLTCYRSNSP--CRFKQMRCPAECPSKSPSNHTDKVCYV 66
           + + +I+ V  S  L + A    T    N+   C+ + + CP ECP++   N  +K+C+V
Sbjct: 6   SSLLMIIFVVASCFLHVKAWHGQTYCGGNATPRCQLRYIDCPEECPTEMFPNSQNKICWV 65

Query: 67  NCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINA 126
           +C  P+C+A C++ KPNC   GS CLDPRFIG DGIVFYFHGKSNEHFS+VSDPD QINA
Sbjct: 66  DCFKPLCEAVCRAVKPNCESYGSICLDPRFIGGDGIVFYFHGKSNEHFSIVSDPDFQINA 125

Query: 127 RFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDG 186
           RF G RPAGR+RDFTWIQALGFLFNSH FSLE  + ATWD+ +DHL+FT DG++++IP  
Sbjct: 126 RFTGHRPAGRTRDFTWIQALGFLFNSHKFSLETTKVATWDSNLDHLKFTIDGQDLIIPQE 185

Query: 187 FLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAH 246
            LS W SS  +I ++R +  NSV+VT+ + AEI VNVVP+TKEDDRIH Y++P DDCFAH
Sbjct: 186 TLSTWYSSDKDIKIERLTEKNSVIVTIKDKAEIMVNVVPVTKEDDRIHNYKLPVDDCFAH 245

Query: 247 LEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLF 306
            EVQF+F  LS KV+G+LGRTY+PDF NPAKPGV MPV+GG+  +RTSSLLS  C  CLF
Sbjct: 246 FEVQFKFINLSPKVDGILGRTYRPDFKNPAKPGVVMPVVGGEDSFRTSSLLSHVCKTCLF 305

Query: 307 S--PARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           S  PA  S  V PK   Y+ +DCS G++SG G+VCRK
Sbjct: 306 SEDPAVASGSVKPK-STYALLDCSRGASSGYGLVCRK 341

[Close]

BLAST of Lsi04G012880 vs. TAIR10
Match: AT5G60520.1 (AT5G60520.1 Late embryogenesis abundant (LEA) protein-related)

HSP 1 Score: 301.6 bits (771), Expect = 6.1e-82
Identity = 139/286 (48.60%), Postives = 193/286 (67.48%), Query Frame = 1


Query: 38  CRFKQMRCPAECPSKSPS-NHTDKVCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIG 97
           C  K + CP ECP + P  N   K C+++C S  C+  CK  K NCNG GS C DPRF+G
Sbjct: 59  CNQKILTCPKECPERKPKMNKKKKACFIDCSSK-CEVTCKWRKANCNGYGSLCYDPRFVG 118

Query: 98  ADGIVFYFHGKSNEHFSLVSDPDLQINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLE 157
            DG++FYFHG  + +F++VSD +LQINA FIG RPAGR+RDFTW+QA   +F+SH+  + 
Sbjct: 119 GDGVMFYFHGNKDGNFAIVSDENLQINAHFIGTRPAGRTRDFTWVQAFSVMFDSHNLVIA 178

Query: 158 AKRAATWDNKVDHLEFTYDGKEVVIPDGFLSQWR--SSKSNIIVQRTSTSNSVLVTLPEI 217
           AK+ A+WD+ VD L   ++G+EV +P    ++WR    +  +IV+RT   N+V VT+  I
Sbjct: 179 AKKVASWDDSVDSLVVRWNGEEVEVPTEGEAEWRIDLDEREVIVERTDERNNVRVTVSGI 238

Query: 218 AEISVNVVPITKEDDRIHKYQIPEDDCFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPA 277
            +I + V PI KE+DR+HKYQ+P+DD FAHLE QF+F  LS  VEGVLG+TY+P +++P 
Sbjct: 239 VQIDIQVRPIGKEEDRVHKYQLPKDDAFAHLETQFKFFNLSDLVEGVLGKTYRPGYVSPV 298

Query: 278 KPGVAMPVLGGDKEYRTSSLLSADCSACLFSPARISNKVDPKIMQY 321
           K GV MP++GG+ +Y+T SL S  C+ C     R   K  P + +Y
Sbjct: 299 KTGVPMPMMGGEDKYQTPSLFSPLCNVC-----RFQGKTGPGVAKY 338

[Close]

BLAST of Lsi04G012880 vs. TAIR10
Match: AT5G60530.1 (AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-related)

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-80
Identity = 136/281 (48.40%), Postives = 185/281 (65.84%), Query Frame = 1


Query: 38  CRFKQMRCPAECPSKSPS-NHTDKVCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIG 97
           C +K + CP ECP + P+ N   K C+++C +  C+A CK  K NCNG GS C DPRF+G
Sbjct: 159 CYYKTLVCPGECPKRKPTKNKNTKGCFIDCTNK-CEATCKWRKTNCNGYGSLCYDPRFVG 218

Query: 98  ADGIVFYFHGKSNEHFSLVSDPDLQINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLE 157
            DG++FYFHG    +F++VSD +LQINA FIG RP GR+RDFTW+QAL  +F +H   + 
Sbjct: 219 GDGVMFYFHGSKGGNFAIVSDNNLQINAHFIGTRPVGRTRDFTWVQALNVMFENHKLVIT 278

Query: 158 AKRAATWDNKVDHLEFTYDGKEVVIPDGFLSQWR---SSKSNIIVQRTSTSNSVLVTLPE 217
           A R   WD   D     YDG+ + +P+   S+WR     K +II++RT   NSV V + +
Sbjct: 279 ANRVNQWDETSDAFTIRYDGELITLPEDEQSEWREISGQKKDIIIERTDERNSVRVLVSD 338

Query: 218 IAEISVNVVPITKEDDRIHKYQIPEDDCFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNP 277
           + ++ + V PI KE++R+H YQ+P+DD FAHLE QF+F  LS  VEGVLG+TY+PD+++ 
Sbjct: 339 LVQMDIRVRPIGKEENRVHNYQLPQDDAFAHLETQFKFLDLSELVEGVLGKTYRPDYVSS 398

Query: 278 AKPGVAMPVLGGDKEYRTSSLLSADCSACLFSPARISNKVD 315
           AK GV MPVLGG+ +Y+T SL S  C  C F P   S   D
Sbjct: 399 AKTGVPMPVLGGEDKYQTPSLFSPTCRLCRFKPQEESLSAD 438

[Close]

BLAST of Lsi04G012880 vs. NCBI nr
Match: gi|778686399|ref|XP_004150113.2| (PREDICTED: uncharacterized protein LOC101217774 [Cucumis sativus])

HSP 1 Score: 656.0 bits (1691), Expect = 3.6e-185
Identity = 311/339 (91.74%), Postives = 329/339 (97.05%), Query Frame = 1


Query: 1   MGRFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDK 60
           MGRF+ +E+SI+LLVFMSGLLQIH ADTLTCY+SNSPCRFKQMRCPAECPSKSPSNHT K
Sbjct: 3   MGRFNRHEISILLLVFMSGLLQIHGADTLTCYKSNSPCRFKQMRCPAECPSKSPSNHTHK 62

Query: 61  VCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 120
           VCYVNCESPVCKA CKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL
Sbjct: 63  VCYVNCESPVCKAGCKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 122

Query: 121 QINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVV 180
           QINARFIG+RPAGRSRDFTWIQALGFLFNSHSFSL+AKRAATWD KVDHL+FTY+G EVV
Sbjct: 123 QINARFIGIRPAGRSRDFTWIQALGFLFNSHSFSLQAKRAATWDEKVDHLKFTYNGNEVV 182

Query: 181 IPDGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDD 240
           IPDG LSQW+SS+SNI+VQRTS SNSVL+TLPEIAEISVNVVPITKEDDRIH Y+IP+DD
Sbjct: 183 IPDGHLSQWKSSESNIMVQRTSNSNSVLLTLPEIAEISVNVVPITKEDDRIHNYRIPKDD 242

Query: 241 CFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCS 300
           CFAHLEVQFRFHGLSSKVEGVLGRTYQPDF+NPAKPGVAMPV+GGDKEYRTSSLLSADCS
Sbjct: 243 CFAHLEVQFRFHGLSSKVEGVLGRTYQPDFINPAKPGVAMPVVGGDKEYRTSSLLSADCS 302

Query: 301 ACLFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           ACLFSPARISNKVDPK+ QYSFIDCSGGSTSGNGIVCRK
Sbjct: 303 ACLFSPARISNKVDPKMRQYSFIDCSGGSTSGNGIVCRK 341

[Close]

BLAST of Lsi04G012880 vs. NCBI nr
Match: gi|659109322|ref|XP_008454656.1| (PREDICTED: uncharacterized protein LOC103495008 [Cucumis melo])

HSP 1 Score: 655.2 bits (1689), Expect = 6.2e-185
Identity = 314/339 (92.63%), Postives = 327/339 (96.46%), Query Frame = 1


Query: 1   MGRFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDK 60
           MGRFS   +SI+LLVFMSGLLQIH ADTLTCY+S SPCRFKQMRCPAECPSKSPSNHTDK
Sbjct: 1   MGRFS-RHVSILLLVFMSGLLQIHGADTLTCYKSKSPCRFKQMRCPAECPSKSPSNHTDK 60

Query: 61  VCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 120
           VCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL
Sbjct: 61  VCYVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDL 120

Query: 121 QINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVV 180
           QINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHL+F Y+GKEVV
Sbjct: 121 QINARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLKFMYNGKEVV 180

Query: 181 IPDGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDD 240
           IPDG LSQW+SS+SNIIVQRTS SNSVL+TLPEIAEISV VVPITKEDDRIH Y+IP+DD
Sbjct: 181 IPDGHLSQWKSSESNIIVQRTSNSNSVLLTLPEIAEISVKVVPITKEDDRIHNYRIPKDD 240

Query: 241 CFAHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCS 300
           CFAHLE+QFRFHGLSSKVEGVLGRTYQPDF+NPAKPGVAMPV+GGDKEYRTSSLLSADCS
Sbjct: 241 CFAHLEIQFRFHGLSSKVEGVLGRTYQPDFINPAKPGVAMPVVGGDKEYRTSSLLSADCS 300

Query: 301 ACLFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           ACLFS ARISNKVDPKI QYSFIDCSGGSTSGNGIVCRK
Sbjct: 301 ACLFSSARISNKVDPKIRQYSFIDCSGGSTSGNGIVCRK 338

[Close]

BLAST of Lsi04G012880 vs. NCBI nr
Match: gi|567919904|ref|XP_006451958.1| (hypothetical protein CICLE_v10010209mg [Citrus clementina])

HSP 1 Score: 495.4 bits (1274), Expect = 8.2e-137
Identity = 226/337 (67.06%), Postives = 285/337 (84.57%), Query Frame = 1


Query: 3   RFSINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVC 62
           + S + + I LL+ +S L+Q +A +TLTC    SPC  K+M CPA+CPS+SP + T KVC
Sbjct: 2   KVSCSSLLIALLILISVLVQTNA-ETLTCTSRRSPCFLKKMTCPAQCPSRSPKDPTAKVC 61

Query: 63  YVNCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQI 122
           Y++C SP+CK ECK  KPNC+G G+ACLDPRFIG DGIVFYFHGKSNEH++LVSD +LQI
Sbjct: 62  YIDCNSPICKTECKKRKPNCSGTGAACLDPRFIGGDGIVFYFHGKSNEHYTLVSDFNLQI 121

Query: 123 NARFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIP 182
           N+RFIGLRP GR+RD+TWIQALGFLFNS +FSLEA +AATWD+++DHL+F+ + +E+VIP
Sbjct: 122 NSRFIGLRPEGRTRDYTWIQALGFLFNSQTFSLEATKAATWDDEIDHLKFSSNREELVIP 181

Query: 183 DGFLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCF 242
           +G LS W+S +SN+ V+RTS  NSV++TLP++AEISVNVVP+TKED+RIH YQIP DDCF
Sbjct: 182 EGHLSSWQSPESNLRVERTSNKNSVVITLPDVAEISVNVVPVTKEDNRIHNYQIPSDDCF 241

Query: 243 AHLEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSAC 302
           AHLEVQFRF+GLSSKVEGVLGRTYQPDF NPAKPGVAMPV+GG+ +YRT+SLLSA+C +C
Sbjct: 242 AHLEVQFRFYGLSSKVEGVLGRTYQPDFKNPAKPGVAMPVVGGEDKYRTTSLLSANCKSC 301

Query: 303 LFSPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           +FSPA + ++ D  +M Y  +DC+G + SGNGIVCRK
Sbjct: 302 IFSPAGVLDQKDALVMDYGTLDCTGSAISGNGIVCRK 337

[Close]

BLAST of Lsi04G012880 vs. NCBI nr
Match: gi|225461342|ref|XP_002284614.1| (PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera])

HSP 1 Score: 494.2 bits (1271), Expect = 1.8e-136
Identity = 233/335 (69.55%), Postives = 278/335 (82.99%), Query Frame = 1


Query: 5   SINEMSIILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYV 64
           S N + IILL F++G+ QI A ++ TC   NSPC  K++ CP+ECP+ S +N   KVCY+
Sbjct: 5   SSNCLLIILLCFVAGVTQIDA-ESRTCTNRNSPCFLKRITCPSECPTSSSTNSKAKVCYI 64

Query: 65  NCESPVCKAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINA 124
           NC SP+C+AECK+ K NCN PG+ACLDPRFIG DGIVFYFHGK NEHFSLVSD +LQINA
Sbjct: 65  NCNSPLCQAECKNRKANCNSPGAACLDPRFIGGDGIVFYFHGKRNEHFSLVSDLNLQINA 124

Query: 125 RFIGLRPAGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDG 184
            FIGLRPAGR+RD+TWIQALG L +SHSFSLEA RA  WD+++DHL+F+YDGKE+ IP+G
Sbjct: 125 HFIGLRPAGRTRDYTWIQALGILVDSHSFSLEATRAVAWDDEIDHLKFSYDGKELDIPEG 184

Query: 185 FLSQWRSSKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAH 244
            LS W  S++++ V+RTS  NSV+VTLPEIAEI VNVVPITKEDDRIH YQIP DDCFAH
Sbjct: 185 HLSAWNFSENDLKVERTSNRNSVVVTLPEIAEILVNVVPITKEDDRIHNYQIPSDDCFAH 244

Query: 245 LEVQFRFHGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLF 304
           LEVQFRF GLSSKVEGVLG+TYQPDF NP KPGVAMPV+GG+ +YRT+SLLSADC +CLF
Sbjct: 245 LEVQFRFFGLSSKVEGVLGQTYQPDFENPVKPGVAMPVVGGEDKYRTTSLLSADCRSCLF 304

Query: 305 SPARISNKVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           SPA + ++ D  IM Y  +DC+GG+TSG GIVCRK
Sbjct: 305 SPAGVFDQKDTLIMDYGTLDCTGGATSGMGIVCRK 338

[Close]

BLAST of Lsi04G012880 vs. NCBI nr
Match: gi|460397283|ref|XP_004244197.1| (PREDICTED: uncharacterized protein LOC101245970 [Solanum lycopersicum])

HSP 1 Score: 493.0 bits (1268), Expect = 4.1e-136
Identity = 220/328 (67.07%), Postives = 275/328 (83.84%), Query Frame = 1


Query: 12  ILLVFMSGLLQIHAADTLTCYRSNSPCRFKQMRCPAECPSKSPSNHTDKVCYVNCESPVC 71
           I+++F++GL +++  + +TC    S C  K + CPAECPSKSPSN   KVCY+NC SPVC
Sbjct: 12  IVILFLAGLTEVNGGELITCTNRKSKCFLKPLYCPAECPSKSPSNSKAKVCYINCNSPVC 71

Query: 72  KAECKSSKPNCNGPGSACLDPRFIGADGIVFYFHGKSNEHFSLVSDPDLQINARFIGLRP 131
           K EC++ K NCN PG+ACLDPRFIG DGIVFYFHGKSNEHFSLVSD +LQINARFIGLRP
Sbjct: 72  KPECRNRKANCNQPGAACLDPRFIGGDGIVFYFHGKSNEHFSLVSDLNLQINARFIGLRP 131

Query: 132 AGRSRDFTWIQALGFLFNSHSFSLEAKRAATWDNKVDHLEFTYDGKEVVIPDGFLSQWRS 191
           AGR RD+TWIQALG LF+ H+FS+EA +A +WD++VDHL+F Y+GKE+ +P+G+ S W S
Sbjct: 132 AGRPRDYTWIQALGILFDMHAFSVEATKAESWDDEVDHLKFYYNGKELGLPEGYPSIWES 191

Query: 192 SKSNIIVQRTSTSNSVLVTLPEIAEISVNVVPITKEDDRIHKYQIPEDDCFAHLEVQFRF 251
           S+S I V+RT+  N   +TLPE+AEISVNVVPITKEDDRIH YQ+P DDCFAHL+VQFRF
Sbjct: 192 SESGIKVERTANKNGAFITLPEVAEISVNVVPITKEDDRIHNYQLPSDDCFAHLDVQFRF 251

Query: 252 HGLSSKVEGVLGRTYQPDFMNPAKPGVAMPVLGGDKEYRTSSLLSADCSACLFSPARISN 311
           +GLS+KVEGVLGRTYQPDF NPAKPGVA+PV+GG+K YRTS+LLS+ C++C+FSPA +S 
Sbjct: 252 YGLSTKVEGVLGRTYQPDFKNPAKPGVAVPVVGGEKMYRTSTLLSSKCNSCIFSPAGVSE 311

Query: 312 KVDPKIMQYSFIDCSGGSTSGNGIVCRK 340
           + DP +M Y  +DC+GGS+ G+GI+CRK
Sbjct: 312 ESDPLVMDYGTLDCTGGSSGGHGIICRK 339

The following BLAST results are available for this feature:

BLAST of Lsi04G012880 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G012880 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIM8_CUCSA	2.5e-185	91.74	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G851860 PE=4 SV=1	[more]
V4TX84_9ROSI	5.7e-137	67.06	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10010209mg PE=4 SV=1	[more]
E0CSR0_VITVI	1.3e-136	69.55	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_19s0014g03410 PE=4 SV=...	[more]
A0A067GFT6_CITSI	2.8e-136	67.06	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042767mg PE=4 SV=1	[more]
A0A061F803_THECC	1.4e-135	67.25	Late embryogenesis abundant (LEA) protein-related OS=Theobroma cacao GN=TCM_0313...	[more]

BLAST of Lsi04G012880 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54370.1	3.9e-121	60.79	Late embryogenesis abundant (LEA) protein-related	[more]
AT1G54890.1	6.2e-119	60.18	Late embryogenesis abundant (LEA) protein-related	[more]
AT4G27400.1	5.0e-116	58.75	Late embryogenesis abundant (LEA) protein-related	[more]
AT5G60520.1	6.1e-82	48.60	Late embryogenesis abundant (LEA) protein-related	[more]
AT5G60530.1	1.2e-80	48.40	late embryogenesis abundant protein-related / LEA protein-related	[more]

BLAST of Lsi04G012880 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778686399\|ref\|XP_004150113.2\|	3.6e-185	91.74	PREDICTED: uncharacterized protein LOC101217774 [Cucumis sativus]	[more]
gi\|659109322\|ref\|XP_008454656.1\|	6.2e-185	92.63	PREDICTED: uncharacterized protein LOC103495008 [Cucumis melo]	[more]
gi\|567919904\|ref\|XP_006451958.1\|	8.2e-137	67.06	hypothetical protein CICLE_v10010209mg [Citrus clementina]	[more]
gi\|225461342\|ref\|XP_002284614.1\|	1.8e-136	69.55	PREDICTED: uncharacterized protein LOC100246927 [Vitis vinifera]	[more]
gi\|460397283\|ref\|XP_004244197.1\|	4.1e-136	67.07	PREDICTED: uncharacterized protein LOC101245970 [Solanum lycopersicum]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR009646	Root_cap

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G012880.1	Lsi04G012880.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009646	Root cap	PFAM	PF06830	Root_cap	coord: 248..304 score: 6.3
None	No IPR available	PANTHER	PTHR31656	FAMILY NOT NAMED	coord: 16..339 score: 1.1E
None	No IPR available	PANTHER	PTHR31656:SF5	LATE EMBRYOGENESIS ABUNDANT-RELATED PROTEIN	coord: 16..339 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G012880	Csa3G851860	Cucumber (Chinese Long) v2	culsiB193
Lsi04G012880	CSPI03G42030	Wild cucumber (PI 183967)	cpilsiB191
Lsi04G012880	Cucsa.341680	Cucumber (Gy14) v1	cgylsiB553
Lsi04G012880	CmaCh01G011880	Cucurbita maxima (Rimu)	cmalsiB426
Lsi04G012880	CmoCh01G012410	Cucurbita moschata (Rifu)	cmolsiB414
Lsi04G012880	Cla023420	Watermelon (97103) v1	lsiwmB340
Lsi04G012880	MELO3C018210	Melon (DHL92) v3.5.1	lsimeB312
Lsi04G012880	ClCG11G018390	Watermelon (Charleston Gray)	lsiwcgB265
Lsi04G012880	MELO3C018210.2	Melon (DHL92) v3.6.1	lsimedB326
Lsi04G012880	Cla97C11G224550	Watermelon (97103) v2	lsiwmbB272
Lsi04G012880	Bhi09G001693	Wax gourd	lsiwgoB395
Lsi04G012880	Cp4.1LG02g01460	Cucurbita pepo (Zucchini)	cpelsiB464
Lsi04G012880	CsGy3G039440	Cucumber (Gy14) v2	cgyblsiB177
Lsi04G012880	Carg14676	Silver-seed gourd	carlsiB284
Lsi04G012880	CsaV3_3G044440	Cucumber (Chinese Long) v3	cuclsiB210

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G012880	Wax gourd	lsiwgoB378
Lsi04G012880	Bottle gourd (USVL1VR-Ls)	lsilsiB098
Lsi04G012880	Bottle gourd (USVL1VR-Ls)	lsilsiB136
Lsi04G012880	Cucumber (Gy14) v1	cgylsiB196
Lsi04G012880	Cucurbita maxima (Rimu)	cmalsiB026
Lsi04G012880	Cucurbita maxima (Rimu)	cmalsiB217
Lsi04G012880	Cucurbita maxima (Rimu)	cmalsiB382
Lsi04G012880	Cucurbita maxima (Rimu)	cmalsiB685
Lsi04G012880	Cucurbita moschata (Rifu)	cmolsiB014
Lsi04G012880	Cucurbita moschata (Rifu)	cmolsiB205
Lsi04G012880	Cucurbita moschata (Rifu)	cmolsiB367
Lsi04G012880	Cucurbita moschata (Rifu)	cmolsiB678
Lsi04G012880	Cucurbita pepo (Zucchini)	cpelsiB034
Lsi04G012880	Cucurbita pepo (Zucchini)	cpelsiB640
Lsi04G012880	Wild cucumber (PI 183967)	cpilsiB051
Lsi04G012880	Cucumber (Chinese Long) v2	culsiB050
Lsi04G012880	Melon (DHL92) v3.5.1	lsimeB290
Lsi04G012880	Watermelon (Charleston Gray)	lsiwcgB277
Lsi04G012880	Watermelon (97103) v1	lsiwmB299
Lsi04G012880	Cucumber (Gy14) v2	cgyblsiB046
Lsi04G012880	Melon (DHL92) v3.6.1	lsimedB304
Lsi04G012880	Silver-seed gourd	carlsiB613
Lsi04G012880	Silver-seed gourd	carlsiB825
Lsi04G012880	Cucumber (Chinese Long) v3	cuclsiB056
Lsi04G012880	Watermelon (97103) v2	lsiwmbB264
Lsi04G012880	Watermelon (97103) v2	lsiwmbB278