Lsi04G012440 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G012440
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 19393056 .. 19399021 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTAGTTAGTGGGCTCGCTTCTCAATTGATTTTGGGGTTGTCTGTCTTATTTGTCATTGGATACTTGAAAGAACCTGTACTGTTTGAAGTTCTGTAATTGTAAATGTGAATAAAGTGAGTGATTTGGTAATGACCTCTCTATTTCAAACTGAATGGTGAAGTTGGGAATCACATTTCCACTCATCTTTAACCTTTCAAACATCTGAAGGGGCTTTAAACAGCATGAACTTTCAACCAAAGACATTTTAAATGTTGTCGATAAACATATGTAAATGATATTTGCAATTCTGACTTTTAAGCAATCATTCTGACTTTTAAGCAATCATTAGAAAAACTTAACGGTATATATTCTTGAAGTCTAGTACTTTTCAGGTTTGTTCAATTTTAGTCATTTTTATGTAACATGTGAACATGTTTTTAAAATTTATAATGAAAATATTAATAAAGAACAAAAAGTTTTTGGACTAAATTTAGGATTGATTTATTCAAATACAAAGACTAAAACTAGATATTTGAAAGTCATGTAATGGATTAAAATGGTATTTTAATCTCAATTTTTCCCCTTGATTTTCTTTAGGACGTAGTTTTATGTTGGAAGAAGAGTTTGAATTTAGACGGCCAACTATTGGCAGTTGGCAATTTGTTTAGACAATACGTAAGAAAAAAGGTAATCCAAATGGATTAGAACTCTTTCAAATTAAGTTGCCAACTGATGAAGATGATGTACTTGTTCTAATTTACAAGCGCCATGTTGAATGTTAGAACAATCACAAGGATCCATTCAAAAATCAAGAAAAACGAGTGTTGCGTGATAACAATTTTGTTTTTTTCTTTTTCGCTTTTACTTCTTTATTATAGTTTCCATTTTTCTTAAATTAATATTTGAATACTTTACAAATACCAAAAACAAAAATAAATTTATAAAAATTTTCAAAACTTGACATAAATTTTGATAAGAGCTTTAGAAAGTAAGTAACTGAGCAAAAAAGGAAAAAAAAAATAGTAAACCGAACACTTATCAAACGAAGTCTTAGTCTTAGATACAAAACATCAAGAAAGCCACCAACTTTTTACCAATATATAAATTACAAGGTGAATTGTTTTATCAAGCCATCCAAATTAAGGTACAAAAGACCAAATTGGACTACTTTATTTAGGAATTTATTTCTCTATAATTATCTACTTTTGGGTTGAAATTATCTATGAGAAGGCTGCTTTTGTTGAGTGAAAAATTGTAGCAAGAGAAATGCTTTTAGAAATGGTTCAAATTCTTTAAAAAAATTAAAAATGAAAAAGACAGTTGTGATAAGCCTGCCTTTTTGAAGTTCAGAGTCCCAATATAAACATAAAAGTCCAAAGATGTACTGTTGACAATTTTTTCAAAAAAGTCATTTGCATTTAAATTTTTTTAAAGTTGTTTAAAATAAAAATACAAATGTTCTATTATTACATTTTTTTCAAAAGTGCTTTTATTCATTGATTTGGTTATATGGTGAAAATGTTTTTATTAATGTTAAATTACTATATAAGTCGATTATTAAACACTTGACTAATAATTTCAATTTTATAATTAAAAACACTTCCACCAATCAAGTTTTATTGTTTTTTTTTCAAGTATACTATCCATTGAGTTGGTCATTAGAGTTAGTCGTTGGAGATGATCGATAGAGTTGGTAGACAAAGTTAGTCATCGAAGGTGATTGTCGAAGTTGGCCGTCTGAGGTAGTAATTGCACGGAGTTGGATGTTAGAGGTCGCTGAAGATGATTGACGAATGTAGTAGTTGCCAGAAGTAGTTGTTGGAGTTTGACTACCAAAGGTGGTCATCGAAACATGTCACCAGTGTAAGGCAGCAGTAGTTGCCAACGATGGTTGTTGCCGGAATAAGATGTCATAGATAGTCATCAAAGTTGGACATCTAAGATGTTCTTCACGGGAGGTGGTAGTGATGTAGATATTTCACAGAATTGGTGAACTTAATGTATTTTATTCAAGAGTTATGTTTTTAAAGTTGTTTTAGTTTTAGTTCTAATTCAGTTAAGGATTCTTTTAAGTTTGTAAGATTGACTAGTTGTCTAGGTTGTAGGTCAGGGATGGCTGTAAGGCTATTTAAAGGGCTAGATGTAAGTTTAGGATCATTCAGTATTCAATAAAATTTCCTTCTTTTAGTTTACATCAATTGGTATCAGAGTCCAAAAATTCTCGAACCTAATGGCAGGTAAGAAGCCAACCACTGGCGGCAATCCCTCAACTAATAATAAAGAAGCGACGCCCTATCACCAACTTTCACAACTAGACGTTTGTTGTCCGTTGAGAATTAGATCGTTGGTATACATAAGCTGTTAGAAAACATTTCAAACCATTTGGATAAACTTTCTATGCATCAAGATCCGTAACCTCCACCTGAAATCAGAGCAAGAAACTTCCCACACCACCAAGAACTTGGTCAAGGTATTAGACATCATCAGCAATATCAAAGAGAAATCCAAAAATTACCAATAGCTATTCAAGAAAGGCCAAGATACAATGTTTATAGAAGAAGACATCGCCAAGCTTTAGATCCTTCAAGTGAAGGAGAGCAAGAGTTAAGTTGAATGTAACATTGAATCAGTCCTTGATTGGATTAAGAGTGTAGAAGGATTCTTCAAACACGCAATTACTCCGAAAATTAAAAAGGTAGACTTAGTAGCACTCAAATTTAAAGGGGGAGTAGCTGCATGATGGAAACAAGTGGAAGAAAATAGATTGCGAAATAGAAAAGAACCTAATAAGACTTGGTAAAGATTGCAAAGAATGATCAAATATCATTTTTTACCTTCAAATTACGAGCAAATACTGTATAATCAGTATCAAAATTGTCGCCAAGGGTTGATGAGTATTGTTGAATACACAAAGGAGTTCCACAGACTAGGAGCAAGAACCAATTTGTTTGAAAGTGAATCACCTCATCGCTCACAAGGTTAATAATCCCTATAATCGACCAAATATGGGGAAATGTTTTCGACATCCTTGATATGGATGTGTCATATACTATTGGATAGACCATGGCAGTATAATTTACAAGCTATCCATAGAGGCCGAGACAATACTTATGAGTTCAATTAGATGGAAAAAAAAAGTAGTGTTATCACCCCTACATCAAAGACAACCAGTTCAATTGAATTTATTTACAAAGAATTCTTGAAACAAAGAAAAGATTATGTGGGGATTGGTTGTGAAGACAATCTATCTTGCAAAAATTCTTCAATAATACCATCAAACGTACAAAATTTATTGAAGGAATATCATTCACACATAAGCACTGCTAATGAAGTACCACCTTTGAGAAACATACAGCATCAAATAGACCTACTTCTTAGAGATATGTTACCTCACCACCCACATAACAAAATGACACCTAAAGAGTATGAAATACTCCATTCACATATGGAGGAACCCCTACAAAAGGACACATTCAGCCAAGTATTAGTCCTTGTGCTATCTCTGCTCTTTTAACACCCAAAAAAATATGGCGGATGTCAAATAAAGATTCCCTATACCAAGAACAAATGACTTGCTTGATCAATTGGGAGGTGCAATGGTATTTTCTAAGGTGGATTTATGCTGTGACTATCATCATATTAGGATAAGACCAGACGATGAGTGAAAGATTGGCTTTAACACCAATGAAGGGCTATTCAAAAGGCTCATAATGTCATTTGGACACTCTAACGTGCCAAGTACCTTCATGCACTTAGTAAACCAATAGGTTCTTCCCTTTCTCAATAATTAATCAATATCAATAATATCAATAATATCATTTCAAAAGTGTTACACAAGCTAAAGGAGGCCAACAACAAGAAAAATTCCAAATATCCTCTGTGGGTTTCTTGTGGCTCCTATTCTTTTTTTTCTTCTAATATCCATGAGTGTACATGCCAACTTGCAATAAGACAACTTGCAATAAGACAATTGAGCTTACCCCACAACATTTGGGTTCCAAGGAATGGGATATTAAATCCTAGGCTGATCACCATGCATTAAACCCATTCCCTATAAGTCTTTTATTGAATTCATGGCCCTTGTTAAATCCCAAGTAAGTGGCCACTATGAATTGAACTCATTCTCTTATAAGTCCTTTATTGAACTCATAGCCCTTATGGTTCTAATGGTCCCTATTGTAGGGCTATGATTGAAGGGTGGTCCTTAAACTTAAGGTCATAAAATTTTGAACCAAAAGTTTCCATCAAAATAGAAAAGAGAAATCATAGATAAAAAAAATGAGACGGCTCTGAAATAGACCAGCACATGACATAAATGCTCGTGTTCACTGTTACAGTGAATCACATTCAAATGATTCATAATTTAATATCCAGTCAGTTATAATGGCAGTTCTATTATTTACATCATAAAACTGCTAGTTGGAGCGGAGATCATATAGCTGTGTTATTTACAAAGGGACCATTAAATGAAAAGCCATTAAAACACTGTACCCACATTTCTCAATCTCAACTCCTCTACATTTCCCATATACACCCATTAATAAAGCTTCCAGGAGTATTAAAAGAATAAACTGCAAACCAGAGTGATGATTAAAAAAAAACACCATTGTTATGGACCAACACTTCATCAACAGGATAGAGTATTAACTAGAGAGATGAGAGTTTACCAAAGTTTCTAGAATTATTTACCTCTACTCAAACTCATCACCTAGGTCTTCAAAATGATTCTCCACCCTGAGGACACTTTTATGATGATTATTTACAGATTTGGGTTGAGACTCCATGCTTATGCTCTCTGTACAATTATTTACATTACTGAGCTGGGGCTGTGACCTTGGGCATTCATACTCATCTACAATGCCCTTGGTTTCTGTTACCATCTTGTAACCACGCCTACCAGTTACTTCAGGTCCGTTGCTGACAACAGAGTCGTGGGGACTCACATCGCTTCTCCATGACCATGATAGCCTTCCATTTTCAAATTGGCCAGATTTCTGGTGCAGCAACAGCTGGTCACTGTTGCTACTTAAATACCTAAATTTCAGAGAGAAAAATTGATGAGAACCAAAAAATCTTATGTTGAGTAAGCAGTCTAATCCTATATAATTTACAACGACAGGATCTTTAGGTTCCCTACGAGACAATTAAAGTTAGGAAGCTCGAGAAATTCTATAATTTAGCTCACCTTGGATGCGAACTTTTGGATGACTGAAGATAGTCAAAAACTGGAACAAGGTCTTTTGACCTAGCTTCAATCGTACGAGTGGGCATCCTTTCGATTTCAAGTTCTCCAGGATGATCGATTTCATCAACTTTGACTCCATCTCTTGCCATCACTTGAAAATATATCTGATCATCAGAAAAAAAAAATGCAGGCATGTAAATCTCAAACAAAAAAAAGAACCTACTTAGAGACACGAGTCAAACAGTACACACCTCAGGTTTTGTCCACAGCGGAGAACGAGCAGCATGCATCTGCAGTTCTGCTTCTGAAATATACAGGTGGTATTGTTCCTCCCTGCAAGTCTTTGCCTTAAAGACATTGCCACTAGCTTCAACAACAGGATTCCCATTCATTTCTTCACAATAATTTTTATTGCAATCGAAACCTCCATTGTCACCATAAATGTCAACGCTATTATCATGAGCCCTACGGTTTTGTTTCTGAGATATATTCCATTTCTGAATAGCTTCAACTACTAGTCTTGCATCCAATTCGGGGACTAATTCAAGAGCCATGCTAGATCTCGGCAAAACTATGGTTGAATCTAAACCCACTCGCAATGCATACTGTATCATACTGCCAGATGGAGAAAAAACTATTATGTGGTACCTAACCTCAGAAGACCCATTGTCCACATGCACAGCATTTCCCTTGCACTCGTGGAAAGCTGAAGCAATGGCTCCCGAAACAATACCCATTCTACCGGTTGCAGAAGCTGCAGCACTACTAACAGTGCCTCTCCAGCCATTACTTCCATGA

mRNA sequence

ATGGTTACTTCAACTACTAGTCTTGCATCCAATTCGGGGACTAATTCAAGAGCCATGCTAGATCTCGGCAAAACTATGGTTGAATCTAAACCCACTCGCAATGCATACTGTATCATACTGCCAGATGGAGAAAAAACTATTATGTGGTACCTAACCTCAGAAGACCCATTGTCCACATGCACAGCATTTCCCTTGCACTCGTGGAAAGCTGAAGCAATGGCTCCCGAAACAATACCCATTCTACCGGTTGCAGAAGCTGCAGCACTACTAACAGTGCCTCTCCAGCCATTACTTCCATGA

Coding sequence (CDS)

ATGGTTACTTCAACTACTAGTCTTGCATCCAATTCGGGGACTAATTCAAGAGCCATGCTAGATCTCGGCAAAACTATGGTTGAATCTAAACCCACTCGCAATGCATACTGTATCATACTGCCAGATGGAGAAAAAACTATTATGTGGTACCTAACCTCAGAAGACCCATTGTCCACATGCACAGCATTTCCCTTGCACTCGTGGAAAGCTGAAGCAATGGCTCCCGAAACAATACCCATTCTACCGGTTGCAGAAGCTGCAGCACTACTAACAGTGCCTCTCCAGCCATTACTTCCATGA

Protein sequence

MVTSTTSLASNSGTNSRAMLDLGKTMVESKPTRNAYCIILPDGEKTIMWYLTSEDPLSTCTAFPLHSWKAEAMAPETIPILPVAEAAALLTVPLQPLLP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0046983 protein dimerization activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G012440.1Lsi04G012440.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G012440CmaCh09G009250Cucurbita maxima (Rimu)cmalsiB026
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G012440Silver-seed gourdcarlsiB031
Lsi04G012440Silver-seed gourdcarlsiB613
Lsi04G012440Silver-seed gourdcarlsiB825
Lsi04G012440Silver-seed gourdcarlsiB933
Lsi04G012440Cucumber (Chinese Long) v3cuclsiB213
Lsi04G012440Watermelon (97103) v2lsiwmbB264
Lsi04G012440Watermelon (97103) v2lsiwmbB278
Lsi04G012440Watermelon (97103) v2lsiwmbB286
Lsi04G012440Wax gourdlsiwgoB395
Lsi04G012440Cucurbita maxima (Rimu)cmalsiB578
Lsi04G012440Bottle gourd (USVL1VR-Ls)lsilsiB136
Lsi04G012440Cucumber (Gy14) v1cgylsiB434
Lsi04G012440Cucurbita maxima (Rimu)cmalsiB426
Lsi04G012440Cucurbita maxima (Rimu)cmalsiB685
Lsi04G012440Cucurbita moschata (Rifu)cmolsiB014
Lsi04G012440Cucurbita moschata (Rifu)cmolsiB367
Lsi04G012440Cucurbita moschata (Rifu)cmolsiB414
Lsi04G012440Cucurbita moschata (Rifu)cmolsiB555
Lsi04G012440Cucurbita moschata (Rifu)cmolsiB678
Lsi04G012440Cucurbita pepo (Zucchini)cpelsiB034
Lsi04G012440Cucurbita pepo (Zucchini)cpelsiB464
Lsi04G012440Cucurbita pepo (Zucchini)cpelsiB640
Lsi04G012440Wild cucumber (PI 183967)cpilsiB194
Lsi04G012440Cucumber (Chinese Long) v2culsiB195
Lsi04G012440Melon (DHL92) v3.5.1lsimeB312
Lsi04G012440Watermelon (Charleston Gray)lsiwcgB277
Lsi04G012440Watermelon (Charleston Gray)lsiwcgB285
Lsi04G012440Watermelon (97103) v1lsiwmB299
Lsi04G012440Watermelon (97103) v1lsiwmB314
Lsi04G012440Cucumber (Gy14) v2cgyblsiB180
Lsi04G012440Melon (DHL92) v3.6.1lsimedB304
Lsi04G012440Melon (DHL92) v3.6.1lsimedB326