Lsi04G012070 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G012070
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transmembrane protein 14C
Location	chr04 : 18613542 .. 18619283 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGGTAGTGAAGAAGAAACTATATACGGCGTGGTTTTGGTGGGGGCGGAGCGAGGGTAACCAAGTCATTTTGAAAGACGAACTAGGGGTACTTTGGTAAATACGTTTGAGGGCGTGTGGACAGTCAATTTTGACCAGTGGCGTCCCACACGCCATACAGCTCATAAGGCAGTTGAGAAGAAGTGGAGAACACCTTCATTCCTCTTTGATCTGTGAAATTAAAGAAGGATTTACTAAAAATCTGATATTCCCAGGAAACCCAGTTTGGAAAAATGCATGATTTCTGCTTCACAATCCCTTATGGATTGATTTTAGTTGGTGGTGGCATTTTTGGCTACCTCAGGAAGGGGAGCACAGCATCGCTAGCTGGAGGTGTGGGTACTGGATTGGTTCTAATTCTGGCTGGATACTTGAGCCTTGGAGCTTTCAAGAAGAAGAAGAACTCCTATCTTGCTCTGATTCTTGAGACAGGTATTGTTGGTTTTATAACTTCTCTTTCCATGTTCATCTTTTCATGTTTGATCTTGTTTTTGCTCTTTCTGGGGTCGAAGATCTTGTTTGCAACTATTGATCCTGGTAGTTTTACCAGTTATAGAACCTTAAACAATGGGATCCTTGCCGCTCAAATGTGTCAATTGTTTTCTAATTTCTTTTTGATGTTTTAGTGTTCTTGTTTCTTCAAACTTGAGACCCTTGTGAGCAAACTCATTCGAGGTATTGTGGGTCTCTTATTTTTCTGTGTAATCTATGCGGCGAAAATCACTAATCACTAGGATTGTTCAAATCATTACCTTATAATATTTTATTAGTAGGAAATCTTGTTATGAATCTATAGCTACAATTCATGAGAACTTGCTGAACACGAGTTTTTTTTTTTTTTTCCTTCTTCTTGCCCTGCTGCTTTTAACCAGTATCGCTTCGTGTTCTCTTCTTGAATTTTATTTCCAAATAGTTAACTTTCTTAGCTCTTTGCTGGGTATTATCTTGAGTTTATGTAACGGGAGGAGTCTGATGGCTGTAAACTTTTTGAAAATGTCAAAAAGAGATTTAATATACTCTCAATTCGCGCTGGTGTGTCCATATTCTTTCATTGGTCTCAGTAGGGTTGTATGGAAGGGAACTACTAGGGGTTTATGGGTAGGAGTAGTATGGTATTAGTCAGTTCATATAGGTAATTAGTTAGGGAGTTAGAGAAGAGAGGCAATTGTTGAGTGATTTAGGGCTTGGGTTAGCATGGAAAGAGAGGGGAGGTTCCAAGTGCCTTATATTTGGTTTATCTTGTAGTTTTTGATCCTTTACCTTTCATTTCAGTTCTTAATTTTTGTTAAGTGGTATCCAAACATTCATTGGCACATTCTGAGCTGCTAGGAGAGCGCTGCCTTAGCCTATGTGCTGCAACCTACCTTCCCATCAGATCAAATGCACACCATTGCCCCTCCATTGGGGCAGGGGAGGAAGGTGAAATGTCGAGTCAAACTCTAGGTGGACTTGCTTTTATGATGCCTGACTGTTTGGTCCATCGGTTTTTAGAAAAATAAAAGAAAAGGGTTATCTAGCACATTGGATTCTTTTAATGCAAGTAACGATGAACTCATGGGGGAGTTGCCTAGTAGATCTTCTGAGCATTCAGTGCTTTCCATAATTGGTATGGATCGGATATCCAGATTTCTTATTGGTGCTGGATGTCTAAAAAAATAGTGTTTGCTAGATGTTTTAGTTTACTTATTTATACTATTTTCTCCCTGAAGATCCTTTTCCAGGACTACTGTGATGTGTGCGTTTTTATGTCTAGTGAACTGCTATAGACACTGATATTCTACATACTTGTTACTTACTCTGTTTTCCTTGATCCTTTATCTGGAGCTTGCATCCATGACCATCATTTTTTATTAATTAGCTACAAATGTAGAAGGTAGCACAATTCGGTGGAATCAAACATCAACTAAGTCCAAGAAAATCAAGGACGCCTTGAAGAAGGGAGCACACTACTTTGATTCTTCTTTCCCACCACTAAGGAAGTGTTAATTGCTGCTATTACTTTCGCACCTGCTTCTCCTATTATAGTGGAATGAACTCCTGCACCTTCTTTTTTTTTCACTGCATTTCTTCCTTTTTTACAACAGTCATGCTTAGTGCTTCTACACCTCCAACTTCAACTGGAATTTTTAGGACATGCAGTTTGAAAGAAGGCTACTTTGGCTACCCTGTCCGAGTGGACTGAAGACCAAATCTTTTTAGGATATGTACCTTGAAAGAGATTTGAACAAGTCGTCCAAGTGGAGATTCGACCAAATCTTTCACGACCCTTTTTATCCATCCTTCGAGCTATTTCCTTTTTGTATAAGAATTTCCTGTGGACTGTCAAGGTATTTTTCCCGGGAAGATCCTGACATGACTGTAGGTTCTTACTTAGTTGGAATATTGCTACAAATATTTGGGAGTTCAAAGTTTGGGCATGGAAACTTAAGGAAAAGAAATGTGTCCCTCCCTCTTCATCAAACAGTTGTGGAGTTTTCCCTTGGAAAGGAAGCTCTTATGGCGAGATTATAAATTACTAGTATGGGCTTTCTCCCCCTTGGGGTTAGTGCTAGCTTCATATACTAATGCCAGTTTCAGTAGTTTCTGGAAATCAATTTTAGGTTTGAGCGATTTGTTTGTCGAGAGGATTAATCTTATGGTGGGTAATAGTGTTAATTGGAGCTTTTGAAAGGATTCCTGGTGTGACGGCAGACCTTTCTCAATGTTCTTTTCCCAGGCCAGGTTGTTTGCCTCGTGATGAATTTGTTGCCTGATTGCTTGGATGGCTATCTGAATTTCTGAAACCTCAATCCTGAAAGGAATATGAATGATGAAGAGGCCTTTGAGTGGGTAGGTACAATGGCTCGGCAAAGATTAAGGTCTTTATTTGGAAATGTCTATGAATAGACGTCAGCACCTGGGACAAAGCTCAAACAAGAAACTCTAACCATCTCTTGCAAGAAACTCTAACCACTTCTCCCATTATTGTAGTCTGTGTTGGCAGAAGAGACTGTGGACAATTACTTGTTCTTTTGGTGCCCTTTTCCTCCATCTTTGGCTCCAGCTCTCAAGTATCTTTGGCTTCAGTATGCTTTCTCATACTGATGCTTAACAGTTTTCTGTCTTTACTGCTGTGTATCATGTCCCAAAAAAAAGAAGGCTAGCTTTTCCTTGTGAACAGGACTAGATCGTTTTTATGCAAAAAATGATTCAAATTATTTTGTACAGAAGCTTTCTGTTTCCAGAGCCTCTCTACGTAGTAAAATTAACTTTTTGTGACTAATATTCTTACACTCTTACGAGGTTGAGAGAGCGGGTGGAGAGGTGTTGGACTTCGGTCACTAGGCCTTTTTCGTAATTATGATCTTGGTCTTGTTCTTGATTAGAGTTCTGTTGTGCAGTTTAGGATAATGCCCTTGTATTTTTATTTAATGAAATCTTGGTTTCTTACAAAAAAAAAAAAAAAAAAAATCTAACATTTATACCAACCGGAGGAACTTTTCGTGGTTCCCTTGCCTTTTGGTTGTGTTCAATCATTTCATTCCTTGAACGAAGTTTGCTTCCTTATACAAGAACGGTATTTCCTTGATGCCACAACGTTGTGTGTTCTGTGTTTCTCAAGAGTTCTCATTAATGATTTATCACTTTTCCATGTCAAGTTAGCTTTGAATTTACTTTAAATGGAGTGATAAAGATGTATGTGCATTTTGGAACAGTATGTAGCGGCGCACTCACGTGGGTGATGGGACAACGGTACTTACAGACTTCAAAGATCATGCCAGCCGGAGTTGTAGCTGGACTCAGGTAACTTGATCTACTTCTAAATTCACGTCAAGAATTTCTTTTAAATGAAAGCAAACATTTTCTTGTGCTGTTGTTTATATCTTGATTGGAAAAACATAGTGATGCCACTATTTATCAGCTATCCGAACTATACCTTTTGTTTTTCGTCTGCGTTACAATACGAACAAAATCTTGTCGAACCAATAGATTTGACGGGTGATGTTATTATCACATTTTTGTAACTTATATTGTTACTGTTATTTATTATTTTTTAAGACACCGAGCTTTCATTGAGTAAAATGAAAAAAAATGTGAGGGCATAGAAAGAAACAAGCCCAACAAGAGGGAGCCCCAAAACACAACCCATGAGAAGATACTCGAATCTAGCAAAATCAAACTAAGGTCATAATTACAAAAAGGCCTAGTTTCCGATGCTCATAAGGGGACATTAAACCTCACCACCTCCCAAAACTTGTTACATGACCTCTTCACCCTTCTAAAGAATCTAATGTTTCTCTCAAGTCAAGTGCCCCCACAAAATAACAAAAAAACTAGCATGCCACAAAACTTTGCCCTTTTCCAAAATGCGAACTTGGGAGCCCACGAAGTAAGATATGGTGGGTATAATTTTACCCCTCCCTCCATGTTATCTTTTTCCTCTCCCTGTGTTATTTTACTCCCTCTGACTTCTCATTCTCTCTCCCACCTGCATTCGATCTTCACGTGAATCTCGTCGTCCCTTTCTCTAGCCTTTTGTCTTCCTCTTTCTTCAACCATTGTTCTCTTTGTTTAACCTCCTAGCACCATCCCTTTCTCTCTCACCTTTCGTATACTCCGTGGATCATCACAAACACAGCATTACAATTCTCAATCATCCACAACCCCAACCGCCAGTTCAAAATCAAATATGAAATCAGGAAGATCAGACGGTAAAATCGAAGCAAGGCCATGAACCTTTTCAGATTTAGATCTCCGCCCATCCTCAGTGATTGAAGAATCGAAAAATGCACAAAATGCTGTCGTCTTCGAATTACCCACAAGAATCGGGCTCTCGTTCATCGAGTAGGCGAAATTTGCCCCCATCTTCAAAATAGTAAAATAGGGAAGTGATAAGCCGTCAAAGACTGTGGAAATAAACAAGGTAGCACCACCGAAGGTTTGAGTGACAACATGAGTGTTGCGAATAAGGAAATTGTAGCAGAAATTGCCAACAATTAGAGCACAAGTAAGAAAATTGGGTGGTGGGTCTTTGGAATTGCTCACCATCTAGGGATTGGGAAGAGAAATAAGAGAGAAATTGAAGAGAAAAGGGGAATGTGTCGATATATTGGTATTGTGATCCCAGAAAAGTGAGGGGAAAGGGGCTAAGCCGCCATGGGAGGATGACTGGAAGAAGAAATGGAAGAAGAAAAGATTTGTAATGGAAAATTGGGAATGAATGAATGAGTATGAATTTGAGGACAGAAAGGAAGAAAGTCGTGTAAGAAGGAGAGAGTGGAGGTGGTAGAGAGAGGCGACACGCGTCGGTGAGAGATTTGGATTCAAAAGGGTTTATGTTTATGCATAAACGTTTTTATTTACTTTAGTTTGCCATTTGCATGAAATTATTCTGTTTAGTGCATCCTTTTTTGTTCAATAAAACAACAAAGTTTGAAGATCTAATTTTCTTTTTCTAAAGAAAGGGGCTTATATTTTTCTTAAAAAAAAAGTGGATCATGGTCAACAAAGGGAGCTTTAAAAAAAACATGAACTAAACAACTCGTCAAATTAAACACCTATGCACCATAAACACAGATAATTTAACTCTCCAGACTAAACAACTCTGCCCAAAATATAGATTATTTCAATTCAGACTAAGACTAAATGACTTTGGACCCCTAATACAGATTATTTTAACTTTCAAACAATATAACTCCCTAGACAATTTAACTCTGTTATTTTT

mRNA sequence

GAGGTAGTGAAGAAGAAACTATATACGGCGTGGTTTTGGTGGGGGCGGAGCGAGGGTAACCAAGTCATTTTGAAAGACGAACTAGGGGTACTTTGGTAAATACGTTTGAGGGCGTGTGGACAGTCAATTTTGACCAGTGGCGTCCCACACGCCATACAGCTCATAAGGCAGTTGAGAAGAAGTGGAGAACACCTTCATTCCTCTTTGATCTGTGAAATTAAAGAAGGATTTACTAAAAATCTGATATTCCCAGGAAACCCAGTTTGGAAAAATGCATGATTTCTGCTTCACAATCCCTTATGGATTGATTTTAGTTGGTGGTGGCATTTTTGGCTACCTCAGGAAGGGGAGCACAGCATCGCTAGCTGGAGGTGTGGGTACTGGATTGGTTCTAATTCTGGCTGGATACTTGAGCCTTGGAGCTTTCAAGAAGAAGAAGAACTCCTATCTTGCTCTGATTCTTGAGACAGGAGAGCGCTGCCTTAGCCTATGTGCTGCAACCTACCTTCCCATCAGATCAAATGCACACCATTGCCCCTCCATTGGGGCAGGGGAGGAAGGTGAAATGTCGAGTCAAACTCTAGGTGGACTTGCTTTTATGATGCCTGACTTATGTAGCGGCGCACTCACGTGGGTGATGGGACAACGGTACTTACAGACTTCAAAGATCATGCCAGCCGGAGTTGTAGCTGGACTCAGGTAACTTGATCTACTTCTAAATTCACGTCAAGAATTTCTTTTAAATGAAAGCAAACATTTTCTTGTGCTGTTGTTTATATCTTGATTGGAAAAACATAGTGATGCCACTATTTATCAGCTATCCGAACTATACCTTTTGTTTTTCGTCTGCGTTACAATACGAACAAAATCTTGTCGAACCAATAGATTTGACGGGTGATGTTATTATCACATTTTTGTAACTTATATTGTTACTGTTATTTATTATTTTTTAAGACACCGAGCTTTCATTGAGTAAAATGAAAAAAAATGTGAGGGCATAGAAAGAAACAAGCCCAACAAGAGGGAGCCCCAAAACACAACCCATGAGAAGATACTCGAATCTAGCAAAATCAAACTAAGGTCATAATTACAAAAAGGCCTAGTTTCCGATGCTCATAAGGGGACATTAAACCTCACCACCTCCCAAAACTTGTTACATGACCTCTTCACCCTTCTAAAGAATCTAATGTTTCTCTCAAGTCAAGTGCCCCCACAAAATAACAAAAAAACTAGCATGCCACAAAACTTTGCCCTTTTCCAAAATGCGAACTTGGGAGCCCACGAAGTAAGATATGGTGGGTATAATTTTACCCCTCCCTCCATGTTATCTTTTTCCTCTCCCTGTGTTATTTTACTCCCTCTGACTTCTCATTCTCTCTCCCACCTGCATTCGATCTTCACGTGAATCTCGTCGTCCCTTTCTCTAGCCTTTTGTCTTCCTCTTTCTTCAACCATTGTTCTCTTTGTTTAACCTCCTAGCACCATCCCTTTCTCTCTCACCTTTCGTATACTCCGTGGATCATCACAAACACAGCATTACAATTCTCAATCATCCACAACCCCAACCGCCAGTTCAAAATCAAATATGAAATCAGGAAGATCAGACGGTAAAATCGAAGCAAGGCCATGAACCTTTTCAGATTTAGATCTCCGCCCATCCTCAGTGATTGAAGAATCGAAAAATGCACAAAATGCTGTCGTCTTCGAATTACCCACAAGAATCGGGCTCTCGTTCATCGAGTAGGCGAAATTTGCCCCCATCTTCAAAATAGTAAAATAGGGAAGTGATAAGCCGTCAAAGACTGTGGAAATAAACAAGGTAGCACCACCGAAGGTTTGAGTGACAACATGAGTGTTGCGAATAAGGAAATTGTAGCAGAAATTGCCAACAATTAGAGCACAAGTAAGAAAATTGGGTGGTGGGTCTTTGGAATTGCTCACCATCTAGGGATTGGGAAGAGAAATAAGAGAGAAATTGAAGAGAAAAGGGGAATGTGTCGATATATTGGTATTGTGATCCCAGAAAAGTGAGGGGAAAGGGGCTAAGCCGCCATGGGAGGATGACTGGAAGAAGAAATGGAAGAAGAAAAGATTTGTAATGGAAAATTGGGAATGAATGAATGAGTATGAATTTGAGGACAGAAAGGAAGAAAGTCGTGTAAGAAGGAGAGAGTGGAGGTGGTAGAGAGAGGCGACACGCGTCGGTGAGAGATTTGGATTCAAAAGGGTTTATGTTTATGCATAAACGTTTTTATTTACTTTAGTTTGCCATTTGCATGAAATTATTCTGTTTAGTGCATCCTTTTTTGTTCAATAAAACAACAAAGTTTGAAGATCTAATTTTCTTTTTCTAAAGAAAGGGGCTTATATTTTTCTTAAAAAAAAAGTGGATCATGGTCAACAAAGGGAGCTTTAAAAAAAACATGAACTAAACAACTCGTCAAATTAAACACCTATGCACCATAAACACAGATAATTTAACTCTCCAGACTAAACAACTCTGCCCAAAATATAGATTATTTCAATTCAGACTAAGACTAAATGACTTTGGACCCCTAATACAGATTATTTTAACTTTCAAACAATATAACTCCCTAGACAATTTAACTCTGTTATTTTT

Coding sequence (CDS)

ATGCATGATTTCTGCTTCACAATCCCTTATGGATTGATTTTAGTTGGTGGTGGCATTTTTGGCTACCTCAGGAAGGGGAGCACAGCATCGCTAGCTGGAGGTGTGGGTACTGGATTGGTTCTAATTCTGGCTGGATACTTGAGCCTTGGAGCTTTCAAGAAGAAGAAGAACTCCTATCTTGCTCTGATTCTTGAGACAGGAGAGCGCTGCCTTAGCCTATGTGCTGCAACCTACCTTCCCATCAGATCAAATGCACACCATTGCCCCTCCATTGGGGCAGGGGAGGAAGGTGAAATGTCGAGTCAAACTCTAGGTGGACTTGCTTTTATGATGCCTGACTTATGTAGCGGCGCACTCACGTGGGTGATGGGACAACGGTACTTACAGACTTCAAAGATCATGCCAGCCGGAGTTGTAGCTGGACTCAGGTAA

Protein sequence

MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYLALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALTWVMGQRYLQTSKIMPAGVVAGLR

Homology

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BLAST of Lsi04G012070 vs. Swiss-Prot
Match: FAX6_ARATH (Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana GN=FAX6 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.4e-21
Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYG++L+GGG  GY++KGS  S AGG GTGL+LILAGY+SL AF+KKKNS +
Sbjct: 1  MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60

Query: 61 ALILET 67
          A++L+T
Sbjct: 61 AMVLQT 66

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BLAST of Lsi04G012070 vs. Swiss-Prot
Match: FAX5_ARATH (Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana GN=FAX5 PE=3 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 4.5e-20
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYG++L+ GG  GYL+KGS ASLAGG GTGL+++LAG++SL AF+KKK S L
Sbjct: 1  MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60

Query: 61 ALILET 67
          A +LET
Sbjct: 61 ATLLET 66

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BLAST of Lsi04G012070 vs. TrEMBL
Match: A0A151U262_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006014 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 8.0e-32
Identity = 84/157 (53.50%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYGL+LVGGG+FGY++KGS ASL GGV +GL+LI+AGYLSL AF K+KNSYL
Sbjct: 1   MHDFCFTIPYGLMLVGGGLFGYIKKGSIASLGGGVASGLLLIVAGYLSLNAFGKRKNSYL 60

Query: 61  ALILETGER--CLSLCA------ATYLPIRS-------NAHHCPSIGAGEEGEMSSQTLG 120
           ALILET  +  CL             LP +        ++ HC S        +  +T+ 
Sbjct: 61  ALILETVVKRGCLDNIEWKGRINECMLPDQDMTGAAWFSSFHCVSDLDLAPDSVVFRTV- 120

Query: 121 GLAFMMPDLCSGALTWVMGQRYLQTSKIMPAGVVAGL 143
              + M  +C+  LTWVMGQRYL+TSKIMPAG+VAG+
Sbjct: 121 ---YAMEHVCAAVLTWVMGQRYLETSKIMPAGLVAGI 153

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BLAST of Lsi04G012070 vs. TrEMBL
Match: A0A0E0NXA9_ORYRU (Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-28
Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYG  ++ GG+ GY R+GSTASLAGG G G +L+LAG++SL AF+K++NSYL
Sbjct: 1   MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKAFEKRRNSYL 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
           AL LET            L  RS+ H   S+               L      +C+ ALT
Sbjct: 61  ALALET--------LLNLLLERSSMHVVVSL---------------LTMESSKICALALT 119

Query: 121 WVMGQRYLQTSKIMPAGVVAGL 143
           +VMGQRYL+TSKIMPAGVVAGL
Sbjct: 121 YVMGQRYLETSKIMPAGVVAGL 119

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BLAST of Lsi04G012070 vs. TrEMBL
Match: I1Q5Y7_ORYGL (Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-28
Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYG  ++ GG+ GY R+GSTASLAGG G G +L+LAG++SL AF+K++NSYL
Sbjct: 1   MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKAFEKRRNSYL 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
           AL LET            L  RS+ H   S+               L      +C+ ALT
Sbjct: 61  ALALET--------LLNLLLERSSMHVVVSL---------------LTMESSKICALALT 119

Query: 121 WVMGQRYLQTSKIMPAGVVAGL 143
           +VMGQRYL+TSKIMPAGVVAGL
Sbjct: 121 YVMGQRYLETSKIMPAGVVAGL 119

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BLAST of Lsi04G012070 vs. TrEMBL
Match: A0A0D9Z9N4_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-28
Identity = 75/142 (52.82%), Postives = 92/142 (64.79%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYG  ++ GG+ GY R+GSTASLAGG G G +L+LAG++SL AF+K++NSYL
Sbjct: 1   MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKAFEKRRNSYL 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
           AL LET            L  RS+ H   S+               L      +C+ ALT
Sbjct: 61  ALALET--------LLNLLLERSSMHVVVSL---------------LTMESSKICALALT 119

Query: 121 WVMGQRYLQTSKIMPAGVVAGL 143
           +VMGQRYL+TSKIMPAGVVAGL
Sbjct: 121 YVMGQRYLETSKIMPAGVVAGL 119

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BLAST of Lsi04G012070 vs. TrEMBL
Match: A3AJN9_ORYSJ (Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_11482 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 9.1e-28
Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYG  ++ GG+ GY R+GSTASLAGG G G +L+LAG++SL  F+K++NSYL
Sbjct: 1   MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYL 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
           AL LET            L  RS+ H   S+               L      +C+ ALT
Sbjct: 61  ALALET--------LLNLLLERSSMHVVVSL---------------LTMESSKICALALT 119

Query: 121 WVMGQRYLQTSKIMPAGVVAGL 143
           +VMGQRYL+TSKIMPAGVVAGL
Sbjct: 121 YVMGQRYLETSKIMPAGVVAGL 119

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BLAST of Lsi04G012070 vs. TAIR10
Match: AT3G20510.1 (AT3G20510.1 Transmembrane proteins 14C)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-22
Identity = 46/66 (69.70%), Postives = 58/66 (87.88%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYG++L+GGG  GY++KGS  S AGG GTGL+LILAGY+SL AF+KKKNS +
Sbjct: 1  MHDFCFTIPYGMLLIGGGFIGYMKKGSITSFAGGAGTGLLLILAGYISLKAFEKKKNSTI 60

Query: 61 ALILET 67
          A++L+T
Sbjct: 61 AMVLQT 66

[Close]

BLAST of Lsi04G012070 vs. TAIR10
Match: AT1G50740.1 (AT1G50740.1 Transmembrane proteins 14C)

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 46/66 (69.70%), Postives = 57/66 (86.36%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYG++L+ GG  GYL+KGS ASLAGG GTGL+++LAG++SL AF+KKK S L
Sbjct: 1  MHDFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAGFISLKAFEKKKTSLL 60

Query: 61 ALILET 67
          A +LET
Sbjct: 61 ATLLET 66

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BLAST of Lsi04G012070 vs. NCBI nr
Match: gi|1012362207|gb|KYP73390.1| (hypothetical protein KK1_006014 [Cajanus cajan])

HSP 1 Score: 144.8 bits (364), Expect = 1.1e-31
Identity = 84/157 (53.50%), Postives = 105/157 (66.88%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYGL+LVGGG+FGY++KGS ASL GGV +GL+LI+AGYLSL AF K+KNSYL
Sbjct: 1   MHDFCFTIPYGLMLVGGGLFGYIKKGSIASLGGGVASGLLLIVAGYLSLNAFGKRKNSYL 60

Query: 61  ALILETGER--CLSLCA------ATYLPIRS-------NAHHCPSIGAGEEGEMSSQTLG 120
           ALILET  +  CL             LP +        ++ HC S        +  +T+ 
Sbjct: 61  ALILETVVKRGCLDNIEWKGRINECMLPDQDMTGAAWFSSFHCVSDLDLAPDSVVFRTV- 120

Query: 121 GLAFMMPDLCSGALTWVMGQRYLQTSKIMPAGVVAGL 143
              + M  +C+  LTWVMGQRYL+TSKIMPAG+VAG+
Sbjct: 121 ---YAMEHVCAAVLTWVMGQRYLETSKIMPAGLVAGI 153

[Close]

BLAST of Lsi04G012070 vs. NCBI nr
Match: gi|125586864|gb|EAZ27528.1| (hypothetical protein OsJ_11482 [Oryza sativa Japonica Group])

HSP 1 Score: 131.3 bits (329), Expect = 1.3e-27
Identity = 74/142 (52.11%), Postives = 91/142 (64.08%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYG  ++ GG+ GY R+GSTASLAGG G G +L+LAG++SL  F+K++NSYL
Sbjct: 1   MHDFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAGFVSLKTFEKRRNSYL 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
           AL LET            L  RS+ H   S+               L      +C+ ALT
Sbjct: 61  ALALET--------LLNLLLERSSMHVVVSL---------------LTMESSKICALALT 119

Query: 121 WVMGQRYLQTSKIMPAGVVAGL 143
           +VMGQRYL+TSKIMPAGVVAGL
Sbjct: 121 YVMGQRYLETSKIMPAGVVAGL 119

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BLAST of Lsi04G012070 vs. NCBI nr
Match: gi|567920560|ref|XP_006452286.1| (hypothetical protein CICLE_v10009934mg [Citrus clementina])

HSP 1 Score: 129.0 bits (323), Expect = 6.5e-27
Identity = 71/143 (49.65%), Postives = 89/143 (62.24%), Query Frame = 1


Query: 1   MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
           MHDFCFTIPYGLIL+GGGI G+ +KGSTASLAGGVGTGL+L+LAGYLSL AF+KKKNSY 
Sbjct: 1   MHDFCFTIPYGLILIGGGIVGFAKKGSTASLAGGVGTGLLLVLAGYLSLKAFEKKKNSY- 60

Query: 61  ALILETGERCLSLCAATYLPIRSNAHHCPSIGAGEEGEMSSQTLGGLAFMMPDLCSGALT 120
                      ++   T    R+  +   ++                       C+  LT
Sbjct: 61  ----------FAIVIETEFRFRAEFYAVDTV-----------------------CAAVLT 109

Query: 121 WVMGQRYLQTSKIMPAGVVAGLR 144
            VM QRY++TSK+MPAG+VAG+R
Sbjct: 121 VVMAQRYMETSKVMPAGIVAGIR 109

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BLAST of Lsi04G012070 vs. NCBI nr
Match: gi|659109104|ref|XP_008454550.1| (PREDICTED: uncharacterized protein LOC103494940 isoform X2 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 8.5e-27
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYGLILVGGGIFGYLRKGS ASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL
Sbjct: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSIASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60

Query: 61 ALILET 67
          ALILET
Sbjct: 61 ALILET 66

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BLAST of Lsi04G012070 vs. NCBI nr
Match: gi|659109102|ref|XP_008454549.1| (PREDICTED: UPF0136 membrane protein At2g26240-like isoform X1 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 8.5e-27
Identity = 65/66 (98.48%), Postives = 65/66 (98.48%), Query Frame = 1


Query: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSTASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60
          MHDFCFTIPYGLILVGGGIFGYLRKGS ASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL
Sbjct: 1  MHDFCFTIPYGLILVGGGIFGYLRKGSIASLAGGVGTGLVLILAGYLSLGAFKKKKNSYL 60

Query: 61 ALILET 67
          ALILET
Sbjct: 61 ALILET 66

The following BLAST results are available for this feature:

BLAST of Lsi04G012070 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FAX6_ARATH	2.4e-21	69.70	Protein FATTY ACID EXPORT 6 OS=Arabidopsis thaliana GN=FAX6 PE=3 SV=1	[more]
FAX5_ARATH	4.5e-20	69.70	Protein FATTY ACID EXPORT 5 OS=Arabidopsis thaliana GN=FAX5 PE=3 SV=1	[more]

BLAST of Lsi04G012070 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A151U262_CAJCA	8.0e-32	53.50	Uncharacterized protein OS=Cajanus cajan GN=KK1_006014 PE=4 SV=1	[more]
A0A0E0NXA9_ORYRU	3.1e-28	52.82	Uncharacterized protein OS=Oryza rufipogon PE=4 SV=1	[more]
I1Q5Y7_ORYGL	3.1e-28	52.82	Uncharacterized protein OS=Oryza glaberrima PE=4 SV=1	[more]
A0A0D9Z9N4_9ORYZ	3.1e-28	52.82	Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1	[more]
A3AJN9_ORYSJ	9.1e-28	52.11	Uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_11482 PE=4 SV=1	[more]

BLAST of Lsi04G012070 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20510.1	1.3e-22	69.70	Transmembrane proteins 14C	[more]
AT1G50740.1	2.5e-21	69.70	Transmembrane proteins 14C	[more]

BLAST of Lsi04G012070 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1012362207\|gb\|KYP73390.1\|	1.1e-31	53.50	hypothetical protein KK1_006014 [Cajanus cajan]	[more]
gi\|125586864\|gb\|EAZ27528.1\|	1.3e-27	52.11	hypothetical protein OsJ_11482 [Oryza sativa Japonica Group]	[more]
gi\|567920560\|ref\|XP_006452286.1\|	6.5e-27	49.65	hypothetical protein CICLE_v10009934mg [Citrus clementina]	[more]
gi\|659109104\|ref\|XP_008454550.1\|	8.5e-27	98.48	PREDICTED: uncharacterized protein LOC103494940 isoform X2 [Cucumis melo]	[more]
gi\|659109102\|ref\|XP_008454549.1\|	8.5e-27	98.48	PREDICTED: UPF0136 membrane protein At2g26240-like isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR005349	TMEM14

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016020	membrane
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G012070.1	Lsi04G012070.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005349	TMEM14 family	PANTHER	PTHR12668	TRANSMEMBRANE PROTEIN 14, 15	coord: 114..142 score: 1.8E-25coord: 1..62 score: 1.8
IPR005349	TMEM14 family	PFAM	PF03647	Tmemb_14	coord: 5..142 score: 6.1
None	No IPR available	PANTHER	PTHR12668:SF0	UPF0136 MEMBRANE PROTEIN CG5532	coord: 114..142 score: 1.8E-25coord: 1..62 score: 1.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G012070	Csa3G418720	Cucumber (Chinese Long) v2	culsiB194
Lsi04G012070	CSPI03G23290	Wild cucumber (PI 183967)	cpilsiB192
Lsi04G012070	CmaCh01G011350	Cucurbita maxima (Rimu)	cmalsiB426
Lsi04G012070	CmoCh01G011860	Cucurbita moschata (Rifu)	cmolsiB414
Lsi04G012070	Cla000878	Watermelon (97103) v1	lsiwmB314
Lsi04G012070	ClCG05G014360	Watermelon (Charleston Gray)	lsiwcgB285
Lsi04G012070	Cla97C05G095630	Watermelon (97103) v2	lsiwmbB286
Lsi04G012070	Cp4.1LG02g01020	Cucurbita pepo (Zucchini)	cpelsiB464
Lsi04G012070	CsGy3G022310	Cucumber (Gy14) v2	cgyblsiB178
Lsi04G012070	Carg05631	Silver-seed gourd	carlsiB933
Lsi04G012070	CsaV3_3G023050	Cucumber (Chinese Long) v3	cuclsiB211

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G012070	Wax gourd	lsiwgoB395
Lsi04G012070	Wax gourd	lsiwgoB406
Lsi04G012070	Cucurbita maxima (Rimu)	cmalsiB026
Lsi04G012070	Cucurbita moschata (Rifu)	cmolsiB014
Lsi04G012070	Cucurbita pepo (Zucchini)	cpelsiB640
Lsi04G012070	Melon (DHL92) v3.5.1	lsimeB309
Lsi04G012070	Melon (DHL92) v3.6.1	lsimedB322
Lsi04G012070	Silver-seed gourd	carlsiB825