Lsi04G011290 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G011290
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Chromosome 3B, genomic scaffold, cultivar Chinese Spring
Location	chr04 : 15160665 .. 15163209 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGTTATTATGGGAGCCGCCTATGTTGTAGTTCCATCATCTTTATGTGAGTTAGAATCTGCTTCAGCAGGCAATGATCGGTTTGCGTTGAACGCTTTAGGTGCATAGGACTAACTCTACTTATTTGTTTCATTGTGCTTTTGGTCAGATGCTTTATATGACATCCCCTTATTATCCCTTCGCCCCTTGTTTCATGTGAAACTGATATCTTTTTAGTATTTCTTAATTCCTTTCTTTATTTGGTAGCTTTTCAAGGACTTTGTGGTGCTCTCCACTCACTAGATCAGGGGTTGGTTTGCCTTTCAAATTGGAATATGGAGACCTTGAATGAATCTACTTTTCCTTGCTATTATATTCTCCAACCGTCACAAAATGGATCAATGTTTCTTAGGGTAATAATCGAATCTTTTTTATGACACGTGGAGGGTTTTCTTTTCTTTATGTAAGTATAACTGTCTTTACCTGTGATTTTGTGTTTTATCATTTTGATTTGGAATCAATTCCCCGTGATCAACTACCAAGGGTGCAAAACACAATGGTTTAGTTTTCTTGTCAGTTTATCTCTGAACTATTAAGGGAAAATTGCAGCGTCTTGCTGGCTCTGAGGAAGTTCGCTATGTACCAGACATCAAGACTTTGATTACCACTCATGTTAGCAAGGAGATCCAGAGTTCCATTCTAGTTTCATTGGAGAAGGTTGAATTTCTTCAAACTTTTTTAGGTGCATTATTATAAAATCTGAGGAAGAAGTAAAGATGCAATTATGCTATTCTTTCAAATTATTTCTTGGTGGGGTTTAAAAATATTTTCTCTCTCATCTTCAGGTTGAACTAAAAGACTACAATCCTTTGATGCATGAAAGAGGCCTCCACCAAAAACTGAACGTTCTTGTGAAAGAAAGTTTGGAGTTCAGGTAGTAATCCTCTTCTCCCTCCTATTGTATACGGAGAGTGTTATATTATAACTTTTTTTCACGTTAGCCAAGGTGGTAATGAATTTAATTAATTACAATGCTCAAAAAAAAAAAATTAATTAAGGAAAATTTTCACCAATAGAAAAAATGTCAAACTATTTATAGAAAATAGAAAGAAAAAAAAACACTAATAGACATTGATATACTTCTATCAGCATCTATCAGTGATAAATTTATATCATTTCTATCACTGTAATACCCTAATAGACTTCTATCATTTCTATTAGTGATAGACCCTAATAGACTTCCATCCATGTTTATCATAACTATCTAAAAATTTTGCTATTTTGTGTAAATAGTTTTCTTTATTTTTCTATTTTTAAAAGTTTCCCTTAAATTAATTACATTTTACATTTTCCTTTTTTTTCTTTTTAAAAATTAAACGTATGAAATTTATCTTAAAAAAATTTAACGAATGAAAACTATTTGCTACTCTGTTCTCTTTATTTAGTTTTCCACTGGTTAAAAGTAGTTTTTGACAATTTAGTCAAATGTTAAAAACGTGTACATTTTTATTTTAGTTTCCAAAGTGTGGAAAAGATTTCGAAAGAGTTTTGAAATTAAATTACAAAACTAGAAACAAATTCTAAATATAATATCCTAGCTGGCTCTACTTTCCGGACTGTTGATGAATGCACTAAAACAAAGCTGTCAGAGTCAAATGAAGTCTAATCCATCTTGGTTTTCTGATTAAAGAACGCAGGAGCTTCCTGGACTACGATTATCCTCCTTTCTGAAATCTAAATAATGTCACATAATTTTTTAGAGACAAAGGTAACATACAGCATTGTCGCCTTCAATAATATGTGTCACATTTCTGTGCCACATCCCACATTTCAAGGGAATTTGTCGGGATTTCTTACCAAACGTAATACGTCATCATATTTGAAACGAAAAAAAAAAATGTATTGCTCACATTCTGTATCGCCCAATTGCACATCCCTTAATTTACTTTTTGAAATTTTGGTTATAATGATGATTAGTAGAGCTGAAAAATAGAAGTTTCTTGGTGTACAGGTCATTAACTCCTACAGCAGAAGAGGGAACCTCCGGCAATGAAACAAACGGCCAAGATTCTTTGAAAGGAACTGTGAATTCTGTAAAAGACATTGAAATTGTAACCGTAATAGACGGCGGTAATGAATCAAATGGCCCAGATTCTTTGAAAGGAACTGTTAACTCTGTAAAAGACATTGAAACTATAACCGCAATGGATGGCACCGAAGCTGGAGTTGCTGAAACTTGGGAGCAGCTAGTAACCCATGAATTCCCTGAAACATGTCCAGTTTATGTTTCCAAAGACAAGTTGGATGGATTTTCTCTGTCACTTCCAGATGGCAACCGTCAATTGGCTGTGAAAACGTCAAGGATTTTAGAGAGACTTGAAGTACCAAGACAAAGAAGTAAGGCTACATCTCCTAATACTCTTACCATTGGGTTGGTTGATCCAAATGCTCCAACGAAAAAGCCGCCAATCCCGTTGGTGCCAGTTCTGACCCGAGACCAAGGCTTCACAGGTACTCAATCTCAACTATTGAAACCAAATTTCAACAAACTCAAAAGAAAACGTACA

mRNA sequence

GTGTTATTATGGGAGCCGCCTATGTTGTAGTTCCATCATCTTTATGTGAGTTAGAATCTGCTTCAGCAGGCAATGATCGGTTTGCGTTGAACGCTTTAGCTTTTCAAGGACTTTGTGGTGCTCTCCACTCACTAGATCAGGGGTTGGTTTGCCTTTCAAATTGGAATATGGAGACCTTGAATGAATCTACTTTTCCTTGCTATTATATTCTCCAACCGTCACAAAATGGATCAATGTTTCTTAGGCGTCTTGCTGGCTCTGAGGAAGTTCGCTATGTACCAGACATCAAGACTTTGATTACCACTCATGTTAGCAAGGAGATCCAGAGTTCCATTCTAGTTTCATTGGAGAAGGTTGAACTAAAAGACTACAATCCTTTGATGCATGAAAGAGGCCTCCACCAAAAACTGAACGTTCTTGTGAAAGAAAGTTTGGAGTTCAGGTCATTAACTCCTACAGCAGAAGAGGGAACCTCCGGCAATGAAACAAACGGCCAAGATTCTTTGAAAGGAACTGTGAATTCTGTAAAAGACATTGAAATTGTAACCGTAATAGACGGCGGTAATGAATCAAATGGCCCAGATTCTTTGAAAGGAACTGTTAACTCTGTAAAAGACATTGAAACTATAACCGCAATGGATGGCACCGAAGCTGGAGTTGCTGAAACTTGGGAGCAGCTAGTAACCCATGAATTCCCTGAAACATGTCCAGTTTATGTTTCCAAAGACAAGTTGGATGGATTTTCTCTGTCACTTCCAGATGGCAACCGTCAATTGGCTGTGAAAACGTCAAGGATTTTAGAGAGACTTGAAGTACCAAGACAAAGAAGTAAGGCTACATCTCCTAATACTCTTACCATTGGGTTGGTTGATCCAAATGCTCCAACGAAAAAGCCGCCAATCCCGTTGGTGCCAGTTCTGACCCGAGACCAAGGCTTCACAGGTACTCAATCTCAACTATTGAAACCAAATTTCAACAAACTCAAAAGAAAACGTACA

Coding sequence (CDS)

ATGGGAGCCGCCTATGTTGTAGTTCCATCATCTTTATGTGAGTTAGAATCTGCTTCAGCAGGCAATGATCGGTTTGCGTTGAACGCTTTAGCTTTTCAAGGACTTTGTGGTGCTCTCCACTCACTAGATCAGGGGTTGGTTTGCCTTTCAAATTGGAATATGGAGACCTTGAATGAATCTACTTTTCCTTGCTATTATATTCTCCAACCGTCACAAAATGGATCAATGTTTCTTAGGCGTCTTGCTGGCTCTGAGGAAGTTCGCTATGTACCAGACATCAAGACTTTGATTACCACTCATGTTAGCAAGGAGATCCAGAGTTCCATTCTAGTTTCATTGGAGAAGGTTGAACTAAAAGACTACAATCCTTTGATGCATGAAAGAGGCCTCCACCAAAAACTGAACGTTCTTGTGAAAGAAAGTTTGGAGTTCAGGTCATTAACTCCTACAGCAGAAGAGGGAACCTCCGGCAATGAAACAAACGGCCAAGATTCTTTGAAAGGAACTGTGAATTCTGTAAAAGACATTGAAATTGTAACCGTAATAGACGGCGGTAATGAATCAAATGGCCCAGATTCTTTGAAAGGAACTGTTAACTCTGTAAAAGACATTGAAACTATAACCGCAATGGATGGCACCGAAGCTGGAGTTGCTGAAACTTGGGAGCAGCTAGTAACCCATGAATTCCCTGAAACATGTCCAGTTTATGTTTCCAAAGACAAGTTGGATGGATTTTCTCTGTCACTTCCAGATGGCAACCGTCAATTGGCTGTGAAAACGTCAAGGATTTTAGAGAGACTTGAAGTACCAAGACAAAGAAGTAAGGCTACATCTCCTAATACTCTTACCATTGGGTTGGTTGATCCAAATGCTCCAACGAAAAAGCCGCCAATCCCGTTGGTGCCAGTTCTGACCCGAGACCAAGGCTTCACAGGTACTCAATCTCAACTATTGAAACCAAATTTCAACAAACTCAAAAGAAAACGTACA

Protein sequence

MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNESTFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKDYNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVTVIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSKDKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIPLVPVLTRDQGFTGTQSQLLKPNFNKLKRKRT

Homology

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BLAST of Lsi04G011290 vs. TrEMBL
Match: A0A0A0KME0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284510 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 9.7e-158
Identity = 291/331 (87.92%), Postives = 302/331 (91.24%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA NDRFA+NALAFQG+CGALHSLDQGL+CLSNWNMET NES
Sbjct: 1   MGAAYVVVPSSLRELESASADNDRFAVNALAFQGVCGALHSLDQGLICLSNWNMETFNES 60

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLAGSEEV YVPDIK+LI  HVSKEIQSSILVSLEKVELKD
Sbjct: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVCYVPDIKSLIIPHVSKEIQSSILVSLEKVELKD 120

Query: 121 YNPLMHERGLHQKLNVLVKESLEFR-SLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIV 180
           YNPLMHERGLHQKLNVLVKESL FR   T TAEEGTSGNETN  DSL+GTVNSVKDIEI 
Sbjct: 121 YNPLMHERGLHQKLNVLVKESLGFRWPSTLTAEEGTSGNETNVHDSLRGTVNSVKDIEIT 180

Query: 181 TVIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSK 240
           T    GNE   PDSLKGTVN VKDIE ++AMDGTE+GVAETWE+LVTHEFPETCPVYVSK
Sbjct: 181 TATSDGNELTVPDSLKGTVNYVKDIEIVSAMDGTESGVAETWEKLVTHEFPETCPVYVSK 240

Query: 241 DKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIP 300
           DKLDGFSLSLP GNRQL  KTSRILERLE PRQRSKATSPNTLT GL+DPNAPTKKPPIP
Sbjct: 241 DKLDGFSLSLPYGNRQLGAKTSRILERLEAPRQRSKATSPNTLTTGLIDPNAPTKKPPIP 300

Query: 301 LVPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           LVP LTRDQGFTGTQSQL+KPNFNKLKRKRT
Sbjct: 301 LVPALTRDQGFTGTQSQLMKPNFNKLKRKRT 331

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BLAST of Lsi04G011290 vs. TrEMBL
Match: B9RA35_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1503000 PE=4 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 5.7e-65
Identity = 148/329 (44.98%), Postives = 200/329 (60.79%), Query Frame = 1


Query: 2   GAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNEST 61
           G  Y V PS+  E+E++S    +  LN+  FQG+C  LHS+D+GLVC S  N++T+  + 
Sbjct: 347 GTPYFVAPSACNEVETSSDEMSQPELNSQLFQGICNYLHSMDEGLVCSSYCNVDTMKGTA 406

Query: 62  FPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKDY 121
           FPCYYIL PS NG M LRRLA  EEV  + ++   I + +SK+IQ++I  SL K++L+DY
Sbjct: 407 FPCYYILLPSDNGPMLLRRLASLEEVLPMLEVNQFIDSSMSKDIQNTIQTSLLKIDLRDY 466

Query: 122 NPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVTV 181
           NP++HERGLH+KLN+L+KES +F ++TP   E TSG  +N        +NS++    +TV
Sbjct: 467 NPVLHERGLHRKLNLLIKESFQFVTVTPKLNEATSGLNSN-------QLNSLEQSNCITV 526

Query: 182 IDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPET-CPVYVSKD 241
           +                +    ++     D T   +AE WEQLV  E P    P  VSK 
Sbjct: 527 VK---------------DEAPQLKMKVGEDKTSYSIAEEWEQLVVSEVPNLYSPTPVSKA 586

Query: 242 KLDGFSLSLPDGNRQLAVKTSRILERLEVPRQ-RSKATSPNTLTIGLVDPNAPTKKPPIP 301
           K+D   LS PD N+QL VKTSRILERLEVP+Q ++K TSP   +    +  AP KKPP+P
Sbjct: 587 KVDMLVLSSPDTNKQLDVKTSRILERLEVPKQLKTKVTSPIFTSSSFSETGAPIKKPPVP 646

Query: 302 LVPVLTRDQGFTGTQSQLLKPNFNKLKRK 329
             P    DQ  T   SQL+KPNF +LKRK
Sbjct: 647 FQPSNATDQSLTS--SQLMKPNFQRLKRK 651

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BLAST of Lsi04G011290 vs. TrEMBL
Match: V4TAH9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030919mg PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.3e-63
Identity = 158/330 (47.88%), Postives = 195/330 (59.09%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           +GA+YVV PS+  E+E+ S   D+  LN+  F+GLC ALHSLDQGL+C S  N+ET+ ++
Sbjct: 341 IGASYVVTPSACHEIETTSDEIDQTELNSQLFRGLCSALHSLDQGLLCSSYCNVETMRKA 400

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
            F CYYILQPS+NG M LRRLAGSEEV  VPD+   I + V KEI+ SI   L K++ +D
Sbjct: 401 MFHCYYILQPSENGPMLLRRLAGSEEVLPVPDVNRFIDSSVPKEIEISIQTFLLKIQSRD 460

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVT 180
           YNP++HERG H KLN LVKESL+F SL     +  S   +   DS +    S   I+IV 
Sbjct: 461 YNPVVHERGFHPKLNSLVKESLQFGSLPTELSDKKSEVNSTRPDSAEVPPKSNSAIDIVV 520

Query: 181 VIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPET-CPVYVSK 240
           +     E N               +     D T A +AE WEQLV  E P+   P  VSK
Sbjct: 521 L----EEENAM------------FDLTAGEDKTAASIAEEWEQLVVSEIPKRFSPSCVSK 580

Query: 241 DKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQ-RSKATSPNTLTIGLVDPNAPTKKPPI 300
            KLD    S PD NRQL  KTSRILERLEVP Q +SK  SP + +  + D     KKP I
Sbjct: 581 PKLDHSVPSPPDNNRQLDEKTSRILERLEVPTQLKSKVVSPVSTSSSISDVCMSKKKPLI 640

Query: 301 PLVPVLTRDQGFTGTQSQLLKPNFNKLKRK 329
           P       DQ    T SQL+KPNF +LKRK
Sbjct: 641 PFQSSQASDQ--VTTSSQLMKPNFQRLKRK 652

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BLAST of Lsi04G011290 vs. TrEMBL
Match: A0A061FYX6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_014790 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.0e-63
Identity = 156/332 (46.99%), Postives = 197/332 (59.34%), Query Frame = 1


Query: 2   GAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNEST 61
           G  Y V PS+  E+E+AS   D+  LN   F+GLC AL SLDQGLVC SN N+E++ E+T
Sbjct: 343 GNPYFVTPSASPEIEAASDEMDQLELNFQLFKGLCSALQSLDQGLVCSSNCNIESMREAT 402

Query: 62  FPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKDY 121
           F CYYILQPS NG M LRRLAGSEEV    D+   I   V KEI+ SI  SL K++ +DY
Sbjct: 403 FHCYYILQPSDNGPMLLRRLAGSEEVLPFSDVNQFIDHSVPKEIEISIQSSLFKLDSRDY 462

Query: 122 NPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVTV 181
           NP+++ERG HQKLN+LVKESL+F S+ P   E TS   T   D  K    S    ++V V
Sbjct: 463 NPVLYERGFHQKLNLLVKESLQFGSVPPNTNEATSELYTTKPDPTKLIAQSTSSDDVVVV 522

Query: 182 IDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFP-ETCPVYVSKD 241
               NE             +  ++ +   + T A + E WE+LV HE P +  P   +K 
Sbjct: 523 ----NE------------EMSQLDQLAGEEKTTASIDEEWERLVVHEVPVKNSPTCTAKP 582

Query: 242 KLDGFS---LSLPDGNRQLAVKTSRILERLEVPRQ-RSKATSPNTLTIGLVDPNAPTKKP 301
              G S   LS PD +RQL + T+RILERLEVPRQ +SKA SP+  +    D N P KKP
Sbjct: 583 N-SGQSVLLLSPPDSSRQLDITTTRILERLEVPRQLKSKAVSPSINSSRTADVNMPMKKP 642

Query: 302 PIPLVPVLTRDQGFTGTQSQLLKPNFNKLKRK 329
            IP  P    DQG   T SQL++P+F + KRK
Sbjct: 643 LIPFQPNHAADQGL--TSSQLIRPSFQRQKRK 655

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BLAST of Lsi04G011290 vs. TrEMBL
Match: M5WF43_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026612mg PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.3e-61
Identity = 153/334 (45.81%), Postives = 197/334 (58.98%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGA+YVV+PS+   +E+     D+  LN   FQGLC ALHSLDQ LVC SN N+ET+ ++
Sbjct: 339 MGASYVVIPSTCNAIETTPDEIDQSELNIQLFQGLCSALHSLDQCLVCSSNCNIETMRQA 398

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TF  YYILQPS NG M LRR+AGSEEV +VPD+  L  + V KEI++SI  SL KV+++D
Sbjct: 399 TFHSYYILQPSDNGPMLLRRVAGSEEVLHVPDLNQLTISSVRKEIENSIKDSLSKVDVRD 458

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTV----NSVKDI 180
           YNP++HERG HQKLN+LVKESL+F S++   +E T   E N        V    NS KD+
Sbjct: 459 YNPMLHERGFHQKLNLLVKESLQFGSISLILKEET--REPNATQPKFPEVIVQPNSTKDV 518

Query: 181 EIVTVIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVY 240
            ++                       +++  T  D T A + E WE+L+        PV 
Sbjct: 519 ALIR------------------EETSELDLTTQEDKTSACITEEWEKLIVKVSEIHSPVC 578

Query: 241 VSKDKLD-GFSLSLPDGNRQLAVKTSRILERLEVPRQ-RSKATSPNTLTIGLVDPNAPTK 300
            SK KLD    LS PDGNRQL  KTSRILERLEVPRQ + ++ SP      + + +   K
Sbjct: 579 TSKPKLDQSLLLSPPDGNRQLDAKTSRILERLEVPRQFKRESVSPILANTCVKNFSVEVK 638

Query: 301 KPPIPLVPVLTRDQGFTGTQSQLLKPNFNKLKRK 329
           KP +   P     Q      SQL+KPNF +LKRK
Sbjct: 639 KPLVESQPNCAPHQSM--ATSQLMKPNFQRLKRK 650

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BLAST of Lsi04G011290 vs. TAIR10
Match: AT5G07380.3 (AT5G07380.3 unknown protein)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-46
Identity = 124/331 (37.46%), Postives = 177/331 (53.47%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           +G  Y+V PS+  E E      D+  LN   FQGLCGAL+S+DQGLVC SN N++T+   
Sbjct: 339 LGIPYIVSPSTCHETEEM----DQPDLNTQIFQGLCGALYSMDQGLVCSSNCNLDTMRAV 398

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
            F CYY+LQPS+ G M LRRLAGSEEV  + ++     + + +EI+ S+  +L ++E  +
Sbjct: 399 EFHCYYVLQPSEKGPMLLRRLAGSEEVLPICNVSQFAESSIPREIEISVKGALLEIESTN 458

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVT 180
           YNPL+H RG HQKLN++VKESL+F SL    ++ T              V+SV    ++ 
Sbjct: 459 YNPLIHNRGFHQKLNLIVKESLQFGSLHSNTKDATY------------EVSSVHSDSVIP 518

Query: 181 VIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQL-VTHEFPETCPVYVSK 240
                 E   P  +     +++++  I   D   A + + WE L VT E     P  V  
Sbjct: 519 A-----EQTFPHIV--NPGTLQEVRIIDEEDKATASITKEWELLVVTEEVRMKSPSPVIT 578

Query: 241 DKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQ-RSKATSPNTLTIGLVDPNAPTKKPPI 300
                 S  +   N+Q  +KTS ILERLE PR+ R    SPN +    + P+        
Sbjct: 579 TIRQVLS-PIQSNNKQADMKTSMILERLEAPRKIRGNVGSPNVVIHNPISPDVCVFSQKK 638

Query: 301 PLVPVLTRDQGFTGTQSQLLKPNFNKLKRKR 330
           PL+P  T       + SQL+KP+F +LKRK+
Sbjct: 639 PLIPFQTTQV----SSSQLMKPSFQRLKRKQ 641

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BLAST of Lsi04G011290 vs. NCBI nr
Match: gi|700195658|gb|KGN50835.1| (hypothetical protein Csa_5G284510 [Cucumis sativus])

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-157
Identity = 291/331 (87.92%), Postives = 302/331 (91.24%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA NDRFA+NALAFQG+CGALHSLDQGL+CLSNWNMET NES
Sbjct: 1   MGAAYVVVPSSLRELESASADNDRFAVNALAFQGVCGALHSLDQGLICLSNWNMETFNES 60

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLAGSEEV YVPDIK+LI  HVSKEIQSSILVSLEKVELKD
Sbjct: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVCYVPDIKSLIIPHVSKEIQSSILVSLEKVELKD 120

Query: 121 YNPLMHERGLHQKLNVLVKESLEFR-SLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIV 180
           YNPLMHERGLHQKLNVLVKESL FR   T TAEEGTSGNETN  DSL+GTVNSVKDIEI 
Sbjct: 121 YNPLMHERGLHQKLNVLVKESLGFRWPSTLTAEEGTSGNETNVHDSLRGTVNSVKDIEIT 180

Query: 181 TVIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSK 240
           T    GNE   PDSLKGTVN VKDIE ++AMDGTE+GVAETWE+LVTHEFPETCPVYVSK
Sbjct: 181 TATSDGNELTVPDSLKGTVNYVKDIEIVSAMDGTESGVAETWEKLVTHEFPETCPVYVSK 240

Query: 241 DKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIP 300
           DKLDGFSLSLP GNRQL  KTSRILERLE PRQRSKATSPNTLT GL+DPNAPTKKPPIP
Sbjct: 241 DKLDGFSLSLPYGNRQLGAKTSRILERLEAPRQRSKATSPNTLTTGLIDPNAPTKKPPIP 300

Query: 301 LVPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           LVP LTRDQGFTGTQSQL+KPNFNKLKRKRT
Sbjct: 301 LVPALTRDQGFTGTQSQLMKPNFNKLKRKRT 331

[Close]

BLAST of Lsi04G011290 vs. NCBI nr
Match: gi|778708440|ref|XP_004140472.2| (PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus])

HSP 1 Score: 564.3 bits (1453), Expect = 1.4e-157
Identity = 291/331 (87.92%), Postives = 302/331 (91.24%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA NDRFA+NALAFQG+CGALHSLDQGL+CLSNWNMET NES
Sbjct: 340 MGAAYVVVPSSLRELESASADNDRFAVNALAFQGVCGALHSLDQGLICLSNWNMETFNES 399

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLAGSEEV YVPDIK+LI  HVSKEIQSSILVSLEKVELKD
Sbjct: 400 TFPCYYILQPSQNGSMFLRRLAGSEEVCYVPDIKSLIIPHVSKEIQSSILVSLEKVELKD 459

Query: 121 YNPLMHERGLHQKLNVLVKESLEFR-SLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIV 180
           YNPLMHERGLHQKLNVLVKESL FR   T TAEEGTSGNETN  DSL+GTVNSVKDIEI 
Sbjct: 460 YNPLMHERGLHQKLNVLVKESLGFRWPSTLTAEEGTSGNETNVHDSLRGTVNSVKDIEIT 519

Query: 181 TVIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSK 240
           T    GNE   PDSLKGTVN VKDIE ++AMDGTE+GVAETWE+LVTHEFPETCPVYVSK
Sbjct: 520 TATSDGNELTVPDSLKGTVNYVKDIEIVSAMDGTESGVAETWEKLVTHEFPETCPVYVSK 579

Query: 241 DKLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIP 300
           DKLDGFSLSLP GNRQL  KTSRILERLE PRQRSKATSPNTLT GL+DPNAPTKKPPIP
Sbjct: 580 DKLDGFSLSLPYGNRQLGAKTSRILERLEAPRQRSKATSPNTLTTGLIDPNAPTKKPPIP 639

Query: 301 LVPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           LVP LTRDQGFTGTQSQL+KPNFNKLKRKRT
Sbjct: 640 LVPALTRDQGFTGTQSQLMKPNFNKLKRKRT 670

[Close]

BLAST of Lsi04G011290 vs. NCBI nr
Match: gi|659109608|ref|XP_008454790.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.2e-146
Identity = 276/330 (83.64%), Postives = 284/330 (86.06%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA ND FA+NALAFQGLCGALHSLDQGL+CLS WNMETLNES
Sbjct: 333 MGAAYVVVPSSLRELESASADNDPFAVNALAFQGLCGALHSLDQGLICLSKWNMETLNES 392

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLA SEEV YVPDIK+LITTHVSKEIQSSILVSLEKVELKD
Sbjct: 393 TFPCYYILQPSQNGSMFLRRLAASEEVHYVPDIKSLITTHVSKEIQSSILVSLEKVELKD 452

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVT 180
           YNPLMHERGLHQKLNVLVKESLEFR  TPTAEEGTSG ETN  DSLKGT+N VKDIEIVT
Sbjct: 453 YNPLMHERGLHQKLNVLVKESLEFRPSTPTAEEGTSGKETNVHDSLKGTLNHVKDIEIVT 512

Query: 181 VIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSKD 240
                                      T MDGTE+GVAETWE+LVTHEFPETCPVYVSKD
Sbjct: 513 ---------------------------TPMDGTESGVAETWEKLVTHEFPETCPVYVSKD 572

Query: 241 KLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIPL 300
           KLDGFSLSL  GNR LA KTSRILERLE PRQRSKATSPNTLTIGL+DPNAPTKKPPIPL
Sbjct: 573 KLDGFSLSLSYGNRPLAAKTSRILERLEAPRQRSKATSPNTLTIGLIDPNAPTKKPPIPL 632

Query: 301 VPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           VPVLTRDQGFTGTQSQL+KPNFNK KRKRT
Sbjct: 633 VPVLTRDQGFTGTQSQLMKPNFNKHKRKRT 635

[Close]

BLAST of Lsi04G011290 vs. NCBI nr
Match: gi|659109610|ref|XP_008454791.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.2e-146
Identity = 276/330 (83.64%), Postives = 284/330 (86.06%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA ND FA+NALAFQGLCGALHSLDQGL+CLS WNMETLNES
Sbjct: 321 MGAAYVVVPSSLRELESASADNDPFAVNALAFQGLCGALHSLDQGLICLSKWNMETLNES 380

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLA SEEV YVPDIK+LITTHVSKEIQSSILVSLEKVELKD
Sbjct: 381 TFPCYYILQPSQNGSMFLRRLAASEEVHYVPDIKSLITTHVSKEIQSSILVSLEKVELKD 440

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVT 180
           YNPLMHERGLHQKLNVLVKESLEFR  TPTAEEGTSG ETN  DSLKGT+N VKDIEIVT
Sbjct: 441 YNPLMHERGLHQKLNVLVKESLEFRPSTPTAEEGTSGKETNVHDSLKGTLNHVKDIEIVT 500

Query: 181 VIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSKD 240
                                      T MDGTE+GVAETWE+LVTHEFPETCPVYVSKD
Sbjct: 501 ---------------------------TPMDGTESGVAETWEKLVTHEFPETCPVYVSKD 560

Query: 241 KLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIPL 300
           KLDGFSLSL  GNR LA KTSRILERLE PRQRSKATSPNTLTIGL+DPNAPTKKPPIPL
Sbjct: 561 KLDGFSLSLSYGNRPLAAKTSRILERLEAPRQRSKATSPNTLTIGLIDPNAPTKKPPIPL 620

Query: 301 VPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           VPVLTRDQGFTGTQSQL+KPNFNK KRKRT
Sbjct: 621 VPVLTRDQGFTGTQSQLMKPNFNKHKRKRT 623

[Close]

BLAST of Lsi04G011290 vs. NCBI nr
Match: gi|659109612|ref|XP_008454792.1| (PREDICTED: uncharacterized protein LOC103495109 isoform X4 [Cucumis melo])

HSP 1 Score: 526.6 bits (1355), Expect = 3.2e-146
Identity = 276/330 (83.64%), Postives = 284/330 (86.06%), Query Frame = 1


Query: 1   MGAAYVVVPSSLCELESASAGNDRFALNALAFQGLCGALHSLDQGLVCLSNWNMETLNES 60
           MGAAYVVVPSSL ELESASA ND FA+NALAFQGLCGALHSLDQGL+CLS WNMETLNES
Sbjct: 281 MGAAYVVVPSSLRELESASADNDPFAVNALAFQGLCGALHSLDQGLICLSKWNMETLNES 340

Query: 61  TFPCYYILQPSQNGSMFLRRLAGSEEVRYVPDIKTLITTHVSKEIQSSILVSLEKVELKD 120
           TFPCYYILQPSQNGSMFLRRLA SEEV YVPDIK+LITTHVSKEIQSSILVSLEKVELKD
Sbjct: 341 TFPCYYILQPSQNGSMFLRRLAASEEVHYVPDIKSLITTHVSKEIQSSILVSLEKVELKD 400

Query: 121 YNPLMHERGLHQKLNVLVKESLEFRSLTPTAEEGTSGNETNGQDSLKGTVNSVKDIEIVT 180
           YNPLMHERGLHQKLNVLVKESLEFR  TPTAEEGTSG ETN  DSLKGT+N VKDIEIVT
Sbjct: 401 YNPLMHERGLHQKLNVLVKESLEFRPSTPTAEEGTSGKETNVHDSLKGTLNHVKDIEIVT 460

Query: 181 VIDGGNESNGPDSLKGTVNSVKDIETITAMDGTEAGVAETWEQLVTHEFPETCPVYVSKD 240
                                      T MDGTE+GVAETWE+LVTHEFPETCPVYVSKD
Sbjct: 461 ---------------------------TPMDGTESGVAETWEKLVTHEFPETCPVYVSKD 520

Query: 241 KLDGFSLSLPDGNRQLAVKTSRILERLEVPRQRSKATSPNTLTIGLVDPNAPTKKPPIPL 300
           KLDGFSLSL  GNR LA KTSRILERLE PRQRSKATSPNTLTIGL+DPNAPTKKPPIPL
Sbjct: 521 KLDGFSLSLSYGNRPLAAKTSRILERLEAPRQRSKATSPNTLTIGLIDPNAPTKKPPIPL 580

Query: 301 VPVLTRDQGFTGTQSQLLKPNFNKLKRKRT 331
           VPVLTRDQGFTGTQSQL+KPNFNK KRKRT
Sbjct: 581 VPVLTRDQGFTGTQSQLMKPNFNKHKRKRT 583

The following BLAST results are available for this feature:

BLAST of Lsi04G011290 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G011290 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KME0_CUCSA	9.7e-158	87.92	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G284510 PE=4 SV=1	[more]
B9RA35_RICCO	5.7e-65	44.98	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1503000 PE=4 SV=1	[more]
V4TAH9_9ROSI	5.3e-63	47.88	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10030919mg PE=4 SV=1	[more]
A0A061FYX6_THECC	9.0e-63	46.99	Uncharacterized protein OS=Theobroma cacao GN=TCM_014790 PE=4 SV=1	[more]
M5WF43_PRUPE	1.3e-61	45.81	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026612mg PE=4 SV=1	[more]

BLAST of Lsi04G011290 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07380.3	1.4e-46	37.46	unknown protein	[more]

BLAST of Lsi04G011290 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700195658\|gb\|KGN50835.1\|	1.4e-157	87.92	hypothetical protein Csa_5G284510 [Cucumis sativus]	[more]
gi\|778708440\|ref\|XP_004140472.2\|	1.4e-157	87.92	PREDICTED: uncharacterized protein LOC101221059 [Cucumis sativus]	[more]
gi\|659109608\|ref\|XP_008454790.1\|	3.2e-146	83.64	PREDICTED: uncharacterized protein LOC103495109 isoform X2 [Cucumis melo]	[more]
gi\|659109610\|ref\|XP_008454791.1\|	3.2e-146	83.64	PREDICTED: uncharacterized protein LOC103495109 isoform X3 [Cucumis melo]	[more]
gi\|659109612\|ref\|XP_008454792.1\|	3.2e-146	83.64	PREDICTED: uncharacterized protein LOC103495109 isoform X4 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G011290.1	Lsi04G011290.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR38390	FAMILY NOT NAMED	coord: 175..330 score: 6.9E-95coord: 1..157 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G011290	Csa5G284510	Cucumber (Chinese Long) v2	culsiB374
Lsi04G011290	CmaCh04G010050	Cucurbita maxima (Rimu)	cmalsiB679
Lsi04G011290	CmoCh04G010840	Cucurbita moschata (Rifu)	cmolsiB672
Lsi04G011290	Cla011706	Watermelon (97103) v1	lsiwmB303
Lsi04G011290	ClCG07G006120	Watermelon (Charleston Gray)	lsiwcgB296
Lsi04G011290	Cla97C07G134160	Watermelon (97103) v2	lsiwmbB297
Lsi04G011290	Bhi07G000291	Wax gourd	lsiwgoB389
Lsi04G011290	Cp4.1LG01g07640	Cucurbita pepo (Zucchini)	cpelsiB361
Lsi04G011290	CsGy5G010150	Cucumber (Gy14) v2	cgyblsiB332
Lsi04G011290	Carg00117	Silver-seed gourd	carlsiB610
Lsi04G011290	CsaV3_5G013390	Cucumber (Chinese Long) v3	cuclsiB388

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G011290	Cucurbita maxima (Rimu)	cmalsiB680
Lsi04G011290	Cucurbita moschata (Rifu)	cmolsiB673
Lsi04G011290	Cucurbita pepo (Zucchini)	cpelsiB362
Lsi04G011290	Melon (DHL92) v3.5.1	lsimeB284
Lsi04G011290	Silver-seed gourd	carlsiB159