Lsi04G010520 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G010520
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	PRA1 (Prenylated RAB acceptor) family protein
Location	chr04 : 12414157 .. 12414804 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCTCCACCGACACTTCCGATTTCAGGTCCTCAGTCGGCTGCTGGAGCTCCATCTCAGCCACCCATCGCCACTCCTGCCTTCCGTGCTTTTCTCTCTCGTTTAACCTCCTCCGTCCGCCAAGGCTTCTCCCATCGCCGCCCATGGTCGGAGCTTGTCGATCGGAGTTCTATGGCTCGTCCGGATAACCTTTCCGAAGCCTATTCCCGGATCCGCAAGAACTTCTCATACTTTCGTGTCAATTACATCACCCTCTTTGGCCTTGTTCTCGGTTTTTCTCTTCTCTCCCACCCGTTTTCTCTCTTGACTCTTCTTTCACTTCTCGCGGCTTGGAGCTTTCTCTACATTTTCCGTCCTTCCGATCAGCCGCTGGTTATTCGTGGCCGTACTTTTTCCGATTTTGAAACGTTGGTCGGGTTGGGGGTTTTGACTGTCATTGTAGTGTTTCTCACTAGTGTTGGATCGCTCCTGATTTCGACGTCGATGATTGGATTGGCCATTGTGTGCATTCACGGTGCGTTTAGGGTTCCAGAGGATCTCTTCCTTGACGACCAAGAGCCTGTAAATGGAGGATTCCTGTCATTTCTCGGTGGCGCCGCCTCCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

mRNA sequence

ATGGCTTCTCCACCGACACTTCCGATTTCAGGTCCTCAGTCGGCTGCTGGAGCTCCATCTCAGCCACCCATCGCCACTCCTGCCTTCCGTGCTTTTCTCTCTCGTTTAACCTCCTCCGTCCGCCAAGGCTTCTCCCATCGCCGCCCATGGTCGGAGCTTGTCGATCGGAGTTCTATGGCTCGTCCGGATAACCTTTCCGAAGCCTATTCCCGGATCCGCAAGAACTTCTCATACTTTCGTGTCAATTACATCACCCTCTTTGGCCTTGTTCTCGGTTTTTCTCTTCTCTCCCACCCGTTTTCTCTCTTGACTCTTCTTTCACTTCTCGCGGCTTGGAGCTTTCTCTACATTTTCCGTCCTTCCGATCAGCCGCTGGTTATTCGTGGCCGTACTTTTTCCGATTTTGAAACGTTGGTCGGGTTGGGGGTTTTGACTGTCATTGTAGTGTTTCTCACTAGTGTTGGATCGCTCCTGATTTCGACGTCGATGATTGGATTGGCCATTGTGTGCATTCACGGTGCGTTTAGGGTTCCAGAGGATCTCTTCCTTGACGACCAAGAGCCTGTAAATGGAGGATTCCTGTCATTTCTCGGTGGCGCCGCCTCCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

Coding sequence (CDS)

ATGGCTTCTCCACCGACACTTCCGATTTCAGGTCCTCAGTCGGCTGCTGGAGCTCCATCTCAGCCACCCATCGCCACTCCTGCCTTCCGTGCTTTTCTCTCTCGTTTAACCTCCTCCGTCCGCCAAGGCTTCTCCCATCGCCGCCCATGGTCGGAGCTTGTCGATCGGAGTTCTATGGCTCGTCCGGATAACCTTTCCGAAGCCTATTCCCGGATCCGCAAGAACTTCTCATACTTTCGTGTCAATTACATCACCCTCTTTGGCCTTGTTCTCGGTTTTTCTCTTCTCTCCCACCCGTTTTCTCTCTTGACTCTTCTTTCACTTCTCGCGGCTTGGAGCTTTCTCTACATTTTCCGTCCTTCCGATCAGCCGCTGGTTATTCGTGGCCGTACTTTTTCCGATTTTGAAACGTTGGTCGGGTTGGGGGTTTTGACTGTCATTGTAGTGTTTCTCACTAGTGTTGGATCGCTCCTGATTTCGACGTCGATGATTGGATTGGCCATTGTGTGCATTCACGGTGCGTTTAGGGTTCCAGAGGATCTCTTCCTTGACGACCAAGAGCCTGTAAATGGAGGATTCCTGTCATTTCTCGGTGGCGCCGCCTCCGCTGCTTCAGCCGCAGGTCCTGCAATTGCAGCGCGTGTATAG

Protein sequence

MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPEDLFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV

Homology

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BLAST of Lsi04G010520 vs. Swiss-Prot
Match: PR1B3_ARATH (PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 2.2e-71
Identity = 144/213 (67.61%), Postives = 171/213 (80.28%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MA+PPTLPIS   S  G+ SQ P++TPAFR FLSRL+SS+RQ  S RRPW ELVDRS+++
Sbjct: 2   MANPPTLPISD-HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAIS 61

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++L++AYSRIR+N  YF+VNY+T+  LVL  SLLSHPFSLL LL L  AW FLY+FRP
Sbjct: 62  RPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRP 121

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLV+ GRTFSD ETL  L +LT++VVFLTSVGSLL S  MIG  IVC+HGAFRVPED
Sbjct: 122 SDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPED 181

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAA 214
           LFLDDQEP N G LSFL GAA++A+ A  +  A
Sbjct: 182 LFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

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BLAST of Lsi04G010520 vs. Swiss-Prot
Match: PR1B1_ARATH (PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 5.5e-70
Identity = 136/207 (65.70%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MA+PPTLP++  Q+     SQPPI TPAFR F SRL++S+R G S RRPW+EL+DRSSMA
Sbjct: 1   MATPPTLPVTNQQAVQ---SQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++L++A SRIRKN +YF+VNY+ +  LVL FSL SHP SLL L+ LL  W FLY+FRP
Sbjct: 61  RPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLV+ GRTFSD ETL+ L + T++VVF+TSVGSLL S  MIG+AIVC+HGAF VP+D
Sbjct: 121 SDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDD 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAA 208
           LFLD+QEP N G LSFLGG+A++A+AA
Sbjct: 181 LFLDEQEPANAGLLSFLGGSATSAAAA 204

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BLAST of Lsi04G010520 vs. Swiss-Prot
Match: PR1B2_ARATH (PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 1.6e-66
Identity = 138/214 (64.49%), Postives = 170/214 (79.44%), Query Frame = 1


Query: 2   ASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMAR 61
           +SP  LP++  Q+A    SQPPI + AFR FLSRL+SS+R+  S RRPW ELVDRSS AR
Sbjct: 3   SSPAILPVTNQQAAT--QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 62

Query: 62  PDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRPS 121
           PD+L++++SRIRKN +YF+VNY  +  LVL FSLLSHPFSLL LLSLL +W FLY+FR S
Sbjct: 63  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 122

Query: 122 DQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPEDL 181
           DQPLV+ GR+FSD ETL+GL + T++VVF+TSVGSLL S   IG+AIVC+HGAFRVP+DL
Sbjct: 123 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 182

Query: 182 FLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           FLD+QEP N G LSF+G +A A SAA   +A RV
Sbjct: 183 FLDEQEPANAGLLSFIGNSA-ATSAAASVVAGRV 213

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BLAST of Lsi04G010520 vs. Swiss-Prot
Match: PR1B4_ARATH (PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.4e-65
Identity = 132/219 (60.27%), Postives = 174/219 (79.45%), Query Frame = 1


Query: 2   ASPPTLPISGPQSAAGAP-----SQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDR 61
           ++PP LPIS PQ+   A      SQPPIATPAFR F++++T +V+ G S RRPW+EL DR
Sbjct: 4   SAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAELADR 63

Query: 62  SSMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLY 121
           S++++P+++S+A  RIRKN+SYF+VNY+T+   ++GFSL++HPFSL+ LL LLA+W FLY
Sbjct: 64  SALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLY 123

Query: 122 IFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFR 181
           +FRP+DQP+V+ GRTFSD ETL  L + ++ V+FLT VGS+L+S  MIG+A++C HGAFR
Sbjct: 124 LFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFR 183

Query: 182 VPEDLFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
            PEDLFLD+QEP   GFLSFLGGAAS  SAA   IAARV
Sbjct: 184 APEDLFLDEQEPAATGFLSFLGGAAS--SAAPAVIAARV 220

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BLAST of Lsi04G010520 vs. Swiss-Prot
Match: PR1B5_ARATH (PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.1e-57
Identity = 123/220 (55.91%), Postives = 160/220 (72.73%), Query Frame = 1


Query: 3   SPPTLPISGPQSAAGAPSQPPIAT-------PAFRAFLSRLTSSVRQGFSHRRPWSELVD 62
           +PP LPIS   +A    +QPPI T       P  RAF++ +T +V  G S  RPWSEL+D
Sbjct: 5   NPPVLPIS--TTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLD 64

Query: 63  RSSMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFL 122
           RS+  +PD+LSEA +R RKN SYFRVNY+ +  L+LGFSLL+HPFSL+ LL L A+W FL
Sbjct: 65  RSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFL 124

Query: 123 YIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAF 182
           Y+FRPSD+PL++ GR+FS++ETL GL + T+ V+F TSVGS+LIS  MIG+A +C+HGAF
Sbjct: 125 YLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAF 184

Query: 183 RVPEDLFLDDQEPVNGGFLSFLG------GAASAASAAGP 210
           R P+DLFLD+Q+    GFLSF+G       A SA+SAA P
Sbjct: 185 RAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

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BLAST of Lsi04G010520 vs. TrEMBL
Match: A0A0A0KP82_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218210 PE=4 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 3.6e-105
Identity = 209/215 (97.21%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPISGPQS+ GAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA
Sbjct: 1   MASPPTLPISGPQSSTGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPDNLSEAYSRIRKNFSYFRVNYITLF LVLGFSLLSHPFSLLTLLSLLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFTLVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLIS SMIG AIVCIHGAFRVPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

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BLAST of Lsi04G010520 vs. TrEMBL
Match: W9QCA7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012274 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 6.1e-84
Identity = 171/215 (79.53%), Postives = 190/215 (88.37%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLP+S  Q AAGA SQPPIATPAFRAFLSRL++S+R GFS RRPW EL+DRSSMA
Sbjct: 1   MASPPTLPVSSSQPAAGATSQPPIATPAFRAFLSRLSASLRNGFSQRRPWLELLDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++LSEAYSRIRKNFSYFRVNY TL  +VL  SLLSHPFSL+ LLSL AAW+FLY+F+P
Sbjct: 61  RPESLSEAYSRIRKNFSYFRVNYATLVAVVLALSLLSHPFSLVVLLSLFAAWAFLYLFKP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVI GRTFSD ETLVGL V+TVIVVF++SVGSLLIS  M+G A+VC HGAFRVPED
Sbjct: 121 SDQPLVILGRTFSDTETLVGLIVVTVIVVFVSSVGSLLISALMVGFALVCAHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEP N GFLSFLGGAASAASAA P+IA+ V
Sbjct: 181 LFLDDQEPTNVGFLSFLGGAASAASAAAPSIASLV 215

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BLAST of Lsi04G010520 vs. TrEMBL
Match: M5XDK4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011389mg PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 1.3e-81
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPIS  QS  GA SQPPIATPAFRAFLSR +SS+R GFS RRPW EL+DRSS+A
Sbjct: 1   MASPPTLPISNNQSTVGAQSQPPIATPAFRAFLSRFSSSIRYGFSQRRPWYELLDRSSLA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPD+LS+AYSRIRKNF+YFRVNY++L  LVL  SLL+HPFSLL LLSLL AW+FLY+FRP
Sbjct: 61  RPDSLSDAYSRIRKNFTYFRVNYVSLLALVLALSLLTHPFSLLVLLSLLGAWAFLYLFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVI GRTFSD ETLVGL VLTV+VVF++SVGSLLIS  +IG AIVC HGAFRVPED
Sbjct: 121 SDQPLVIVGRTFSDAETLVGLVVLTVVVVFVSSVGSLLISALLIGFAIVCAHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEP N GFLSFLGGA S A+A   ++AARV
Sbjct: 181 LFLDDQEPANAGFLSFLGGATSTAAA---SVAARV 212

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BLAST of Lsi04G010520 vs. TrEMBL
Match: F6HCA0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02030 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 2.8e-81
Identity = 173/218 (79.36%), Postives = 187/218 (85.78%), Query Frame = 1


Query: 1   MASPPTLPISGPQS---AAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRS 60
           MASPPTLPIS  QS   AAG   QPPIATPAFRAF+SRL++S+R GFS RRPW ELVDRS
Sbjct: 1   MASPPTLPISSSQSTGVAAGQSQQPPIATPAFRAFMSRLSASIRHGFSQRRPWLELVDRS 60

Query: 61  SMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYI 120
           SMARPDNLS+A SRIR+NFSYFRVNY+TL  LVL FSLLSHPFSLL LL LLAAW FLY+
Sbjct: 61  SMARPDNLSDAASRIRRNFSYFRVNYLTLLALVLAFSLLSHPFSLLVLLCLLAAWLFLYL 120

Query: 121 FRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRV 180
           FRPSDQPLV+ GRTFSD ETL  L VLT++VVFLTSVGSLLIS  MIGLAIVC HGAFR+
Sbjct: 121 FRPSDQPLVLLGRTFSDRETLGILVVLTIVVVFLTSVGSLLISALMIGLAIVCAHGAFRM 180

Query: 181 PEDLFLDDQEPVNGGFLSFLGGAA-SAASAAGPAIAAR 215
           PEDLFLDDQEP   GFLSFLGGAA SAA+AA PA+AAR
Sbjct: 181 PEDLFLDDQEPAASGFLSFLGGAASSAAAAAAPAVAAR 218

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BLAST of Lsi04G010520 vs. TrEMBL
Match: A0A061FLZ1_THECC (Prenylated RAB acceptor 1.B4 OS=Theobroma cacao GN=TCM_042426 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 5.3e-80
Identity = 169/218 (77.52%), Postives = 188/218 (86.24%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAG--APSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSS 60
           MA+P T+P++  QS AG  A SQPPIATPAFRAFLSRLTSS+RQG S RRPW EL+DRS+
Sbjct: 1   MANPATIPMTSSQSTAGSGAQSQPPIATPAFRAFLSRLTSSIRQGLSQRRPWYELIDRSA 60

Query: 61  MARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIF 120
           MARPDNL++AYSRIRKN SYF+VNYITL  +VL FSLLSHP SLL LL LLAAW FLY+F
Sbjct: 61  MARPDNLTDAYSRIRKNLSYFKVNYITLLVVVLAFSLLSHPLSLLVLLGLLAAWVFLYLF 120

Query: 121 RPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVP 180
           RPSDQPLV+ GRTFSD ETL  L VLTV VVFLTSVGSLLIS  +IG+AIVC+HGAFRVP
Sbjct: 121 RPSDQPLVLFGRTFSDRETLGALVVLTVFVVFLTSVGSLLISALLIGVAIVCLHGAFRVP 180

Query: 181 EDLFLDDQEPVNGGFLSFLGGAA-SAASAAGPAIAARV 216
           EDLFLDDQEP N GFLSFLGGAA SAA+AA PA+A+RV
Sbjct: 181 EDLFLDDQEPANTGFLSFLGGAASSAAAAAAPAVASRV 218

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BLAST of Lsi04G010520 vs. TAIR10
Match: AT5G05380.1 (AT5G05380.1 prenylated RAB acceptor 1.B3)

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-72
Identity = 144/213 (67.61%), Postives = 171/213 (80.28%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MA+PPTLPIS   S  G+ SQ P++TPAFR FLSRL+SS+RQ  S RRPW ELVDRS+++
Sbjct: 2   MANPPTLPISD-HSGGGSQSQQPVSTPAFRTFLSRLSSSIRQSLSQRRPWLELVDRSAIS 61

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++L++AYSRIR+N  YF+VNY+T+  LVL  SLLSHPFSLL LL L  AW FLY+FRP
Sbjct: 62  RPESLTDAYSRIRRNLPYFKVNYVTIVSLVLALSLLSHPFSLLVLLCLFCAWIFLYLFRP 121

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLV+ GRTFSD ETL  L +LT++VVFLTSVGSLL S  MIG  IVC+HGAFRVPED
Sbjct: 122 SDQPLVVLGRTFSDRETLGVLVILTIVVVFLTSVGSLLTSALMIGFGIVCLHGAFRVPED 181

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAA 214
           LFLDDQEP N G LSFL GAA++A+ A  +  A
Sbjct: 182 LFLDDQEPANTGLLSFLSGAATSAAVAAASTPA 213

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BLAST of Lsi04G010520 vs. TAIR10
Match: AT3G56110.1 (AT3G56110.1 prenylated RAB acceptor 1.B1)

HSP 1 Score: 265.4 bits (677), Expect = 3.1e-71
Identity = 136/207 (65.70%), Postives = 169/207 (81.64%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MA+PPTLP++  Q+     SQPPI TPAFR F SRL++S+R G S RRPW+EL+DRSSMA
Sbjct: 1   MATPPTLPVTNQQAVQ---SQPPINTPAFRTFFSRLSTSIRDGLSQRRPWTELIDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++L++A SRIRKN +YF+VNY+ +  LVL FSL SHP SLL L+ LL  W FLY+FRP
Sbjct: 61  RPESLTDALSRIRKNLAYFKVNYVAIVSLVLAFSLFSHPLSLLVLIGLLGGWMFLYLFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLV+ GRTFSD ETL+ L + T++VVF+TSVGSLL S  MIG+AIVC+HGAF VP+D
Sbjct: 121 SDQPLVVFGRTFSDRETLLALVLSTIVVVFMTSVGSLLTSALMIGVAIVCVHGAFVVPDD 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAA 208
           LFLD+QEP N G LSFLGG+A++A+AA
Sbjct: 181 LFLDEQEPANAGLLSFLGGSATSAAAA 204

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BLAST of Lsi04G010520 vs. TAIR10
Match: AT2G40380.1 (AT2G40380.1 prenylated RAB acceptor 1.B2)

HSP 1 Score: 253.8 bits (647), Expect = 9.3e-68
Identity = 138/214 (64.49%), Postives = 170/214 (79.44%), Query Frame = 1


Query: 2   ASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMAR 61
           +SP  LP++  Q+A    SQPPI + AFR FLSRL+SS+R+  S RRPW ELVDRSS AR
Sbjct: 3   SSPAILPVTNQQAAT--QSQPPINSHAFRTFLSRLSSSLRESLSQRRPWLELVDRSSFAR 62

Query: 62  PDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRPS 121
           PD+L++++SRIRKN +YF+VNY  +  LVL FSLLSHPFSLL LLSLL +W FLY+FR S
Sbjct: 63  PDSLTDSFSRIRKNLAYFKVNYSAIVSLVLAFSLLSHPFSLLVLLSLLGSWMFLYLFRSS 122

Query: 122 DQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPEDL 181
           DQPLV+ GR+FSD ETL+GL + T++VVF+TSVGSLL S   IG+AIVC+HGAFRVP+DL
Sbjct: 123 DQPLVLFGRSFSDRETLLGLVLTTIVVVFMTSVGSLLTSALTIGIAIVCLHGAFRVPDDL 182

Query: 182 FLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           FLD+QEP N G LSF+G +A A SAA   +A RV
Sbjct: 183 FLDEQEPANAGLLSFIGNSA-ATSAAASVVAGRV 213

[Close]

BLAST of Lsi04G010520 vs. TAIR10
Match: AT2G38360.1 (AT2G38360.1 prenylated RAB acceptor 1.B4)

HSP 1 Score: 250.0 bits (637), Expect = 1.3e-66
Identity = 132/219 (60.27%), Postives = 174/219 (79.45%), Query Frame = 1


Query: 2   ASPPTLPISGPQSAAGAP-----SQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDR 61
           ++PP LPIS PQ+   A      SQPPIATPAFR F++++T +V+ G S RRPW+EL DR
Sbjct: 4   SAPPVLPISNPQTVPSAAPSSVESQPPIATPAFRNFINQITETVKNGLSKRRPWAELADR 63

Query: 62  SSMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLY 121
           S++++P+++S+A  RIRKN+SYF+VNY+T+   ++GFSL++HPFSL+ LL LLA+W FLY
Sbjct: 64  SALSKPESISDAAVRIRKNYSYFKVNYLTVATAIVGFSLVTHPFSLVFLLCLLASWLFLY 123

Query: 122 IFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFR 181
           +FRP+DQP+V+ GRTFSD ETL  L + ++ V+FLT VGS+L+S  MIG+A++C HGAFR
Sbjct: 124 LFRPTDQPIVLFGRTFSDRETLGCLILFSIFVIFLTDVGSVLVSAMMIGVALICAHGAFR 183

Query: 182 VPEDLFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
            PEDLFLD+QEP   GFLSFLGGAAS  SAA   IAARV
Sbjct: 184 APEDLFLDEQEPAATGFLSFLGGAAS--SAAPAVIAARV 220

[Close]

BLAST of Lsi04G010520 vs. TAIR10
Match: AT5G01640.1 (AT5G01640.1 prenylated RAB acceptor 1.B5)

HSP 1 Score: 223.0 bits (567), Expect = 1.8e-58
Identity = 123/220 (55.91%), Postives = 160/220 (72.73%), Query Frame = 1


Query: 3   SPPTLPISGPQSAAGAPSQPPIAT-------PAFRAFLSRLTSSVRQGFSHRRPWSELVD 62
           +PP LPIS   +A    +QPPI T       P  RAF++ +T +V  G S  RPWSEL+D
Sbjct: 5   NPPVLPIS--TTATDTTNQPPIVTAVVESQPPVVRAFVNGVTETVCGGLSRSRPWSELLD 64

Query: 63  RSSMARPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFL 122
           RS+  +PD+LSEA +R RKN SYFRVNY+ +  L+LGFSLL+HPFSL+ LL L A+W FL
Sbjct: 65  RSAFTKPDSLSEAGTRFRKNSSYFRVNYVCIVALILGFSLLAHPFSLILLLCLAASWLFL 124

Query: 123 YIFRPSDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAF 182
           Y+FRPSD+PL++ GR+FS++ETL GL + T+ V+F TSVGS+LIS  MIG+A +C+HGAF
Sbjct: 125 YLFRPSDRPLILFGRSFSEYETLGGLILSTIAVIFFTSVGSVLISALMIGIATICVHGAF 184

Query: 183 RVPEDLFLDDQEPVNGGFLSFLG------GAASAASAAGP 210
           R P+DLFLD+Q+    GFLSF+G       A SA+SAA P
Sbjct: 185 RAPDDLFLDEQDHAASGFLSFIGVPAIPSVAPSASSAASP 222

[Close]

BLAST of Lsi04G010520 vs. NCBI nr
Match: gi|659114075|ref|XP_008456893.1| (PREDICTED: PRA1 family protein B1 [Cucumis melo])

HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPISGPQSA GAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA
Sbjct: 1   MASPPTLPISGPQSATGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPDNLSEAYSRIRKNFSYFRVNYITLF LVLGFSLLSHPFSLLTLLSLLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFALVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLIS SMIG AIVCIHGAFRVPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

[Close]

BLAST of Lsi04G010520 vs. NCBI nr
Match: gi|449457444|ref|XP_004146458.1| (PREDICTED: PRA1 family protein B1-like [Cucumis sativus])

HSP 1 Score: 389.0 bits (998), Expect = 5.2e-105
Identity = 209/215 (97.21%), Postives = 210/215 (97.67%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPISGPQS+ GAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA
Sbjct: 1   MASPPTLPISGPQSSTGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPDNLSEAYSRIRKNFSYFRVNYITLF LVLGFSLLSHPFSLLTLLSLLAAW FLYIFRP
Sbjct: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFTLVLGFSLLSHPFSLLTLLSLLAAWCFLYIFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLIS SMIG AIVCIHGAFRVPED
Sbjct: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISASMIGFAIVCIHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV
Sbjct: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 215

[Close]

BLAST of Lsi04G010520 vs. NCBI nr
Match: gi|703063740|ref|XP_010087030.1| (hypothetical protein L484_012274 [Morus notabilis])

HSP 1 Score: 318.5 bits (815), Expect = 8.7e-84
Identity = 171/215 (79.53%), Postives = 190/215 (88.37%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLP+S  Q AAGA SQPPIATPAFRAFLSRL++S+R GFS RRPW EL+DRSSMA
Sbjct: 1   MASPPTLPVSSSQPAAGATSQPPIATPAFRAFLSRLSASLRNGFSQRRPWLELLDRSSMA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RP++LSEAYSRIRKNFSYFRVNY TL  +VL  SLLSHPFSL+ LLSL AAW+FLY+F+P
Sbjct: 61  RPESLSEAYSRIRKNFSYFRVNYATLVAVVLALSLLSHPFSLVVLLSLFAAWAFLYLFKP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVI GRTFSD ETLVGL V+TVIVVF++SVGSLLIS  M+G A+VC HGAFRVPED
Sbjct: 121 SDQPLVILGRTFSDTETLVGLIVVTVIVVFVSSVGSLLISALMVGFALVCAHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEP N GFLSFLGGAASAASAA P+IA+ V
Sbjct: 181 LFLDDQEPTNVGFLSFLGGAASAASAAAPSIASLV 215

[Close]

BLAST of Lsi04G010520 vs. NCBI nr
Match: gi|596005734|ref|XP_007218394.1| (hypothetical protein PRUPE_ppa011389mg [Prunus persica])

HSP 1 Score: 310.8 bits (795), Expect = 1.8e-81
Identity = 167/215 (77.67%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPIS  QS  GA SQPPIATPAFRAFLSR +SS+R GFS RRPW EL+DRSS+A
Sbjct: 1   MASPPTLPISNNQSTVGAQSQPPIATPAFRAFLSRFSSSIRYGFSQRRPWYELLDRSSLA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPD+LS+AYSRIRKNF+YFRVNY++L  LVL  SLL+HPFSLL LLSLL AW+FLY+FRP
Sbjct: 61  RPDSLSDAYSRIRKNFTYFRVNYVSLLALVLALSLLTHPFSLLVLLSLLGAWAFLYLFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVI GRTFSD ETLVGL VLTV+VVF++SVGSLLIS  +IG AIVC HGAFRVPED
Sbjct: 121 SDQPLVIVGRTFSDAETLVGLVVLTVVVVFVSSVGSLLISALLIGFAIVCAHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEP N GFLSFLGGA S A+A   ++AARV
Sbjct: 181 LFLDDQEPANAGFLSFLGGATSTAAA---SVAARV 212

[Close]

BLAST of Lsi04G010520 vs. NCBI nr
Match: gi|645256158|ref|XP_008233823.1| (PREDICTED: PRA1 family protein B1 [Prunus mume])

HSP 1 Score: 310.5 bits (794), Expect = 2.4e-81
Identity = 166/215 (77.21%), Postives = 186/215 (86.51%), Query Frame = 1


Query: 1   MASPPTLPISGPQSAAGAPSQPPIATPAFRAFLSRLTSSVRQGFSHRRPWSELVDRSSMA 60
           MASPPTLPIS  QS  GA SQPPIATPAFRAF+SR +SS+R GFS RRPW EL+DRSS+A
Sbjct: 1   MASPPTLPISNNQSTVGAQSQPPIATPAFRAFISRFSSSIRYGFSQRRPWYELLDRSSLA 60

Query: 61  RPDNLSEAYSRIRKNFSYFRVNYITLFGLVLGFSLLSHPFSLLTLLSLLAAWSFLYIFRP 120
           RPD+LS+AYSRIRKNF+YFRVNY++L  LVL  SLL+HPFSLL LLSLL AW+FLY+FRP
Sbjct: 61  RPDSLSDAYSRIRKNFTYFRVNYVSLLALVLALSLLTHPFSLLVLLSLLGAWAFLYLFRP 120

Query: 121 SDQPLVIRGRTFSDFETLVGLGVLTVIVVFLTSVGSLLISTSMIGLAIVCIHGAFRVPED 180
           SDQPLVI GRTFSD ETLVGL VLTV+VVF++SVGSLLIS  +IG AIVC HGAFRVPED
Sbjct: 121 SDQPLVILGRTFSDAETLVGLVVLTVVVVFVSSVGSLLISALLIGFAIVCAHGAFRVPED 180

Query: 181 LFLDDQEPVNGGFLSFLGGAASAASAAGPAIAARV 216
           LFLDDQEP N GFLSFLGGA S A+A   ++AARV
Sbjct: 181 LFLDDQEPANAGFLSFLGGATSTAAA---SVAARV 212

The following BLAST results are available for this feature:

BLAST of Lsi04G010520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PR1B3_ARATH	2.2e-71	67.61	PRA1 family protein B3 OS=Arabidopsis thaliana GN=PRA1B3 PE=1 SV=1	[more]
PR1B1_ARATH	5.5e-70	65.70	PRA1 family protein B1 OS=Arabidopsis thaliana GN=PRA1B1 PE=1 SV=1	[more]
PR1B2_ARATH	1.6e-66	64.49	PRA1 family protein B2 OS=Arabidopsis thaliana GN=PRA1B2 PE=1 SV=1	[more]
PR1B4_ARATH	2.4e-65	60.27	PRA1 family protein B4 OS=Arabidopsis thaliana GN=PRA1B4 PE=1 SV=1	[more]
PR1B5_ARATH	3.1e-57	55.91	PRA1 family protein B5 OS=Arabidopsis thaliana GN=PRA1B5 PE=1 SV=1	[more]

BLAST of Lsi04G010520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KP82_CUCSA	3.6e-105	97.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G218210 PE=4 SV=1	[more]
W9QCA7_9ROSA	6.1e-84	79.53	Uncharacterized protein OS=Morus notabilis GN=L484_012274 PE=4 SV=1	[more]
M5XDK4_PRUPE	1.3e-81	77.67	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011389mg PE=4 SV=1	[more]
F6HCA0_VITVI	2.8e-81	79.36	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g02030 PE=4 SV=...	[more]
A0A061FLZ1_THECC	5.3e-80	77.52	Prenylated RAB acceptor 1.B4 OS=Theobroma cacao GN=TCM_042426 PE=4 SV=1	[more]

BLAST of Lsi04G010520 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G05380.1	1.2e-72	67.61	prenylated RAB acceptor 1.B3	[more]
AT3G56110.1	3.1e-71	65.70	prenylated RAB acceptor 1.B1	[more]
AT2G40380.1	9.3e-68	64.49	prenylated RAB acceptor 1.B2	[more]
AT2G38360.1	1.3e-66	60.27	prenylated RAB acceptor 1.B4	[more]
AT5G01640.1	1.8e-58	55.91	prenylated RAB acceptor 1.B5	[more]

BLAST of Lsi04G010520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659114075\|ref\|XP_008456893.1\|	1.4e-105	97.67	PREDICTED: PRA1 family protein B1 [Cucumis melo]	[more]
gi\|449457444\|ref\|XP_004146458.1\|	5.2e-105	97.21	PREDICTED: PRA1 family protein B1-like [Cucumis sativus]	[more]
gi\|703063740\|ref\|XP_010087030.1\|	8.7e-84	79.53	hypothetical protein L484_012274 [Morus notabilis]	[more]
gi\|596005734\|ref\|XP_007218394.1\|	1.8e-81	77.67	hypothetical protein PRUPE_ppa011389mg [Prunus persica]	[more]
gi\|645256158\|ref\|XP_008233823.1\|	2.4e-81	77.21	PREDICTED: PRA1 family protein B1 [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G010520.1	Lsi04G010520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 44..185 score: 1.2
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 2..202 score: 1.3E
None	No IPR available	PANTHER	PTHR19317:SF9	PRA1 FAMILY PROTEIN B1-RELATED	coord: 2..202 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G010520	Csa5G218210	Cucumber (Chinese Long) v2	culsiB369
Lsi04G010520	CSPI05G11210	Wild cucumber (PI 183967)	cpilsiB373
Lsi04G010520	Cucsa.144250	Cucumber (Gy14) v1	cgylsiB232
Lsi04G010520	CmaCh04G001240	Cucurbita maxima (Rimu)	cmalsiB671
Lsi04G010520	CmaCh04G010890	Cucurbita maxima (Rimu)	cmalsiB672
Lsi04G010520	CmoCh04G011540	Cucurbita moschata (Rifu)	cmolsiB662
Lsi04G010520	Cla007255	Watermelon (97103) v1	lsiwmB306
Lsi04G010520	MELO3C020093	Melon (DHL92) v3.5.1	lsimeB282
Lsi04G010520	ClCG07G004680	Watermelon (Charleston Gray)	lsiwcgB297
Lsi04G010520	MELO3C020093.2	Melon (DHL92) v3.6.1	lsimedB300
Lsi04G010520	Cla97C07G133140	Watermelon (97103) v2	lsiwmbB298
Lsi04G010520	Bhi07G000456	Wax gourd	lsiwgoB381
Lsi04G010520	Cp4.1LG01g05710	Cucurbita pepo (Zucchini)	cpelsiB355
Lsi04G010520	Cp4.1LG01g11740	Cucurbita pepo (Zucchini)	cpelsiB354
Lsi04G010520	CsGy5G008500	Cucumber (Gy14) v2	cgyblsiB338
Lsi04G010520	Carg00191	Silver-seed gourd	carlsiB605
Lsi04G010520	Carg24492	Silver-seed gourd	carlsiB828
Lsi04G010520	CsaV3_5G010620	Cucumber (Chinese Long) v3	cuclsiB394

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G010520	Cucumber (Chinese Long) v3	cuclsiB487
Lsi04G010520	Watermelon (97103) v2	lsiwmbB270
Lsi04G010520	Wax gourd	lsiwgoB362
Lsi04G010520	Bottle gourd (USVL1VR-Ls)	lsilsiB128
Lsi04G010520	Cucurbita maxima (Rimu)	cmalsiB285
Lsi04G010520	Cucurbita moschata (Rifu)	cmolsiB274
Lsi04G010520	Cucurbita moschata (Rifu)	cmolsiB663
Lsi04G010520	Wild cucumber (PI 183967)	cpilsiB465
Lsi04G010520	Cucumber (Chinese Long) v2	culsiB458
Lsi04G010520	Watermelon (Charleston Gray)	lsiwcgB263
Lsi04G010520	Cucumber (Gy14) v2	cgyblsiB424