Lsi04G010360 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G010360
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 12111836 .. 12113130 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACACAAGATGAGGAGATCGCCATGAACAGAACTCCCTCCTCTGAGTTTGCTGATGATGCCATCAAGGGTGAAACATCTTCACATCAGGCTCACACCAATATGTTGATTTCGAGTGGTTTTCCCTTAGCCAATAACTTACCAACCGAAGGCAAAATGAAGTGGAAAAACAAGTCAAAATAAAAAATGAAAGAGGCTATTAAGAACTTGCAAGACCATGTCATGATAGTTGAGAACGAACTTAAGGAACTGAAGTCCAACATGACAGAAATGAAGTTGATGCTATCGACCATATATAAACAACTTGGAGTAGAAGAACAGGTATGTGATTATAATGATCTATTGTGCTAAACATTATTATCAGTTATACTAAATCATGTTGATACTATGTAGGTAAAGAAGGAGAACATTGAAGATTTTGACACTTTGGTAAAGGATGAAGAGAAAAAGAATGAAATGCAAGATGAGCATAAGGAAAATGAAAATGAAGAGTTGGACACAGCGAGCAGACCTTCCTCGTTGAAAATGCCAAAGGAAGATCATAGTGGAGTCCAAATTGAGGTGGATCAACCAACAAATGCCTTGGATAGTGAACTCCAAAATGAGGTGGATCAAGTTACAAATGTCTTGGATAGTGAAGTTAAGAATGTAACAAAGATTGCACCTTTCTCATTAAACAATCCATATGTCTGGCCCGCACGGATAAAACGTGCAAGTACTTATATTTCCACTCCCTTCACAACCCTAAGTAAAAGGCCAAAGAATTCCAAAAATTATTCCCAATGTGATTCAGTCGTGTACAATCCCATGCACGAAATACTAACAAGTGAGTTGGACAGACTTAGACACTAGATCTATGACAAGCATACAAATAATGAGTTACGAGACACGATTTATGGGAAAAAACCAAAAGTGTGGTTCAAAGATTTGTTTCTGTGTTAAAGGTGGTTGGCAGATAAGGTAATTAACTGTACCTTTATTCTTATATATATATATATATATATATATATATAGTTAACTACTTTTTTACAATAACAATAAATGTATTTTGTTTGCATTTCGCACGTAGATGCTCTTTTTTTATCATTTGCTTGAAGATTAAAGCGACTCAGATTTATTGTGCCCAGAACTTCACAACTACAAATACAATATTCATTGTTAGTACGTTTACATTACTAACATTAATTGAAAGTTAAACTGTTTTATTATTAAAATATATGTGCATCTTTGCAGCGGCAACTAGAATCAAAATGTCCCCTGTATCAACAATGCCTCGAGGAGAAGCGTACATTTGA

mRNA sequence

ATGACACAAGATGAGGAGATCGCCATGAACAGAACTCCCTCCTCTGAGTTTGCTGATGATGCCATCAAGGGTGAAACATCTTCACATCAGGCTCACACCAATATGTTGATTTCGAGTGTTGAGAACGAACTTAAGGAACTGAAGTCCAACATGACAGAAATGAAGTTGATGCTATCGACCATATATAAACAACTTGGAGTAGAAGAACAGGTAAAGAAGGAGAACATTGAAGATTTTGACACTTTGGTAAAGGATGAAGAGAAAAAGAATGAAATGCAAGATGAGCATAAGGAAAATGAAAATGAAGAGTTGGACACAGCGAGCAGACCTTCCTCGTTGAAAATGCCAAAGGAAGATCATAGTGGAGTCCAAATTGAGGTGGATCAACCAACAAATGCCTTGGATAGTGAACTCCAAAATGAGGTGGATCAAGTTACAAATGTCTTGGATAGTGAAGTTAAGAATGTAACAAAGATTGCACCTTTCTCATTAAACAATCCATATGTCTGGCCCGCACGGATAAAACGTGCAACGGCAACTAGAATCAAAATGTCCCCTGTATCAACAATGCCTCGAGGAGAAGCGTACATTTGA

Coding sequence (CDS)

ATGACACAAGATGAGGAGATCGCCATGAACAGAACTCCCTCCTCTGAGTTTGCTGATGATGCCATCAAGGGTGAAACATCTTCACATCAGGCTCACACCAATATGTTGATTTCGAGTGTTGAGAACGAACTTAAGGAACTGAAGTCCAACATGACAGAAATGAAGTTGATGCTATCGACCATATATAAACAACTTGGAGTAGAAGAACAGGTAAAGAAGGAGAACATTGAAGATTTTGACACTTTGGTAAAGGATGAAGAGAAAAAGAATGAAATGCAAGATGAGCATAAGGAAAATGAAAATGAAGAGTTGGACACAGCGAGCAGACCTTCCTCGTTGAAAATGCCAAAGGAAGATCATAGTGGAGTCCAAATTGAGGTGGATCAACCAACAAATGCCTTGGATAGTGAACTCCAAAATGAGGTGGATCAAGTTACAAATGTCTTGGATAGTGAAGTTAAGAATGTAACAAAGATTGCACCTTTCTCATTAAACAATCCATATGTCTGGCCCGCACGGATAAAACGTGCAACGGCAACTAGAATCAAAATGTCCCCTGTATCAACAATGCCTCGAGGAGAAGCGTACATTTGA

Protein sequence

MTQDEEIAMNRTPSSEFADDAIKGETSSHQAHTNMLISSVENELKELKSNMTEMKLMLSTIYKQLGVEEQVKKENIEDFDTLVKDEEKKNEMQDEHKENENEELDTASRPSSLKMPKEDHSGVQIEVDQPTNALDSELQNEVDQVTNVLDSEVKNVTKIAPFSLNNPYVWPARIKRATATRIKMSPVSTMPRGEAYI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G010360.1Lsi04G010360.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 37..57
score: -coord: 82..103
scor

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None