Lsi04G010030 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGTAACACAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAGTCTTTGTAAAGACAACAAGCATAATCAAAGAATTATCAAAGATGCAGATTACTAGAAGGAACTAGTAACATTCTATAAGAAATATGGCGTTGAGCAAGGATTACCGCCATCAAAGAAAAAGAAAAAATCATCCAAAAGGCTTTTTAGCAGAAGCAAAAACAAGCAACAGAATGATGAAAAGCACCGAAAGAGGAAATATTATAACATAAGTAAGAAGTATTCTAAGAAAAAGGAAACTACTTGCTTCCGATGTAATAAACAGGGACATTATGCCAACAGATGCCCTTTGATGAAGAAGGTCAATAATCTAGAAATCGACAAAGACCTAAAACAACCTCTTCTCTTTGCTATTCGTGACAAAGAAGAAGATATGTCCATCTCGGGAGACTCTTCCACCGAAGAAGGATTTATCAATGAAGTAGTAGAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA ATGGAGAACAAACTGGACATGGTCAATCAATTGGTGTACACCTTAATGAAGCATTTTGTAGGACGTACAACCGTATATTCCAATCAAGCCACAGAGGCTCTCTTGAAAATGAGATGTCGAAAGATGAACGACTTCAAGTGGTATAAAGACGTCTTTATGGCTTGTGTTTATAATCTCACTTCCTGTAGAGATGAAATCTGGAAGCGAAAGTTCATGGAAGGATTACCCCCTTACATTGCAGAGAAGTTTTATCAAAGAAGGTCCGAAAGTTTTGAAGAAGGACAGATCAATTGGAATGCCCTCGCCTACGGGGACATTACCAACAATATCCAGGCATTATGCTTAAAAGATTCCTCCTCTGAAGCAGAATCTTTCGACTCCTCCCAATATTCAGACGATGCAATACCATGCACCGGTTGTATAAATGTTCTAACAAGAGATCAGGAACATATGCTTGATCTTATAGAAGAACTTCCAGACGAAGCCTCCCGAAGAACAGCCCTTCTTAAGCTTTGCAACTCTCTCGAAGAACAAAAGTCGAAAGCTCAAGAATTCGAGCCAATATAA MENKLDMVNQLVYTLMKHFVGRTTVYSNQATEALLKMRCRKMNDFKWYKDVFMACVYNLTSCRDEIWKRKFMEGLPPYIAEKFYQRRSESFEEGQINWNALAYGDITNNIQALCLKDSSSEAESFDSSQYSDDAIPCTGCINVLTRDQEHMLDLIEELPDEASRRTALLKLCNSLEEQKSKAQEFEPI
BLAST of Lsi04G010030 vs. TrEMBL
Match: A0A0D2STQ6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G078200 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 1.3e-18 Identity = 64/196 (32.65%), Postives = 107/196 (54.59%), Query Frame = 1
BLAST of Lsi04G010030 vs. TrEMBL
Match: A0A0D2SQP0_GOSRA (Uncharacterized protein (Fragment) OS=Gossypium raimondii GN=B456_010G104800 PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 5.0e-18 Identity = 61/207 (29.47%), Postives = 108/207 (52.17%), Query Frame = 1
BLAST of Lsi04G010030 vs. TrEMBL
Match: A5ARQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037318 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 4.3e-17 Identity = 54/164 (32.93%), Postives = 90/164 (54.88%), Query Frame = 1
BLAST of Lsi04G010030 vs. TrEMBL
Match: A5ARA1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_014931 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 7.3e-17 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 1
BLAST of Lsi04G010030 vs. TrEMBL
Match: A0A022PPM0_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a021562mg PE=4 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.2e-16 Identity = 42/108 (38.89%), Postives = 64/108 (59.26%), Query Frame = 1
BLAST of Lsi04G010030 vs. NCBI nr
Match: gi|659128065|ref|XP_008464028.1| (PREDICTED: uncharacterized protein LOC103502012 [Cucumis melo]) HSP 1 Score: 131.7 bits (330), Expect = 1.3e-27 Identity = 58/110 (52.73%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Lsi04G010030 vs. NCBI nr
Match: gi|763767465|gb|KJB34680.1| (hypothetical protein B456_006G078200 [Gossypium raimondii]) HSP 1 Score: 101.3 bits (251), Expect = 1.9e-18 Identity = 64/196 (32.65%), Postives = 107/196 (54.59%), Query Frame = 1
BLAST of Lsi04G010030 vs. NCBI nr
Match: gi|763798693|gb|KJB65648.1| (hypothetical protein B456_010G104800, partial [Gossypium raimondii]) HSP 1 Score: 99.4 bits (246), Expect = 7.2e-18 Identity = 61/207 (29.47%), Postives = 108/207 (52.17%), Query Frame = 1
BLAST of Lsi04G010030 vs. NCBI nr
Match: gi|147787098|emb|CAN62741.1| (hypothetical protein VITISV_037318 [Vitis vinifera]) HSP 1 Score: 96.3 bits (238), Expect = 6.1e-17 Identity = 54/164 (32.93%), Postives = 90/164 (54.88%), Query Frame = 1
BLAST of Lsi04G010030 vs. NCBI nr
Match: gi|147778853|emb|CAN60505.1| (hypothetical protein VITISV_014931 [Vitis vinifera]) HSP 1 Score: 95.5 bits (236), Expect = 1.0e-16 Identity = 53/168 (31.55%), Postives = 89/168 (52.98%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |