Lsi04G009010 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G009010
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 9061968 .. 9063552 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACTCCACAGCCTTCAGCTGCACGTCTAACGACCTCGATAGTAAGAACTCTTTTCCCTCCGGGTTTAAAAGCTCGATCGTTGCAAAAAATTTGATCCCAGTTTATCGTCAAGATAAACAGCTTCTTACCAACAAAAAAAATTTCAAACCACCTGCACAAACATTCAAAGGTTATGGAAATTTTGGCATTTGTTATATCTTCCAATGGTAATAAAAGTTTATTGTGGTTGCCATGTTTCTCAAAGCATATTCCCAACAGAAAATTGGTCAAATCAACCAAATAGAGAGAGGAAAACTGAAAGTACAGTCATAGGTGACCTAAAACAAACCTAGTTTGATTAGGAAATGTTTAAAAGTCAGAATCAGTCATTTCGAGTACAGTACGAATGTTCCATAATCGTCGAATCCATTCAATATAATTGATGATTTTAGGTTCACATTCATCAATGTAAGAGAAAAAGGTATTTTTCCCTATGCCCTTCAAACTCGAGCAATGAATCGTTGCAACAACTAATCATTGGAAAGCATACTTCTTGAATAGAACTCTCTTGATTTCCAATAATCATGAATCATAAGCTTAACATCGACTTCAATTCATCACACTTTTCACATTCAACGTAGTAAAAATTTCTCCTACATCTGATACCTGATTAGAATTCTATAGAGATGTGAGCATCACTATGCTGAAAATTCAACTGCTTTGGACCCAAACAATTTGAAGTAGGCACGATGAGTTAGAATGCGTATTATCCACATACTAGTACAAGGCAACTATTGTGATGTACATCACTATGGGGTTTGGTTGAATTCAAATTTCATCTTTCAAAAAACAACTAGAATTTCAAGTCAAGAGACAACTTTAAGGGAACTAAAAACAATTTGAAGCCATCTATAGGCATACTTTTCAACCCTTAAAAAACCACCATCTTGGAACTTTTCCTACCACTTTTCACACCAAACTCCATTGACTAAGAGCAATTTAACAAAGAAAAGTTAAAATTGACAAATATGCAAGTTGGTGATAGTAAAATATGAACCCCAACAAAAATGAATTTACTGTATTTAAACGACTAAAAGTCCTGAGATGACTCGACGCACCGCCACATCTATGAAATAAATACCAAAGCAAAAGAAAATGTAAAAATCTTGACACTTAACTAAAGAGAGAACTCGCCAATTATGCATATTTAACTTCCATGTTAAACTAAGTCAGCTCAAAATATATCTATGTCGTACATAAACTATTGTGTAATAGTTAAGAGTATATATATACCATTTTAATCATGTTATACCACATTAAAGATTCTTACTATTGATGTTTTGATAAAGCATACATCAAACATCAAAGTAAACAATCATACGAAGTCTTTATCGACGTGTTCTATTATTACTTACATGTTTGTTGACAAGGATGCTTTAAACAAAAGGGTAGAAAGCCATAGGATTATCAACAGTGATTAAACATTAGGGTAAACTTACGAATGTTCAATTATCGATGTAATGAGTTATACATCGATTCAAAAATAGCAGCACAAAGAATTATATTCAAACAAAACTTTATAGACAAGTGGGTGGGAGTAG

mRNA sequence

ATGGCAACTCCACAGCCTTCAGCTGCACGTCTAACGACCTCGATAAATCAGTCATTTCGAGTACAGTTCACATTCATCAATGTAAGAGAAAAAGCTCAAAATATATCTATGTCGTACATAAACTATTGTGTAATAGTTAAGACATACATCAAACATCAAAGTAAACAATCATACGAAGTCTTTATCGACGTGTTCTATTATTACTTACATACAAGTGGGTGGGAGTAG

Coding sequence (CDS)

ATGGCAACTCCACAGCCTTCAGCTGCACGTCTAACGACCTCGATAAATCAGTCATTTCGAGTACAGTTCACATTCATCAATGTAAGAGAAAAAGCTCAAAATATATCTATGTCGTACATAAACTATTGTGTAATAGTTAAGACATACATCAAACATCAAAGTAAACAATCATACGAAGTCTTTATCGACGTGTTCTATTATTACTTACATACAAGTGGGTGGGAGTAG

Protein sequence

MATPQPSAARLTTSINQSFRVQFTFINVREKAQNISMSYINYCVIVKTYIKHQSKQSYEVFIDVFYYYLHTSGWE
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G009010.1Lsi04G009010.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G009010Cucumber (Gy14) v1cgylsiB066
Lsi04G009010Cucumber (Gy14) v1cgylsiB217
Lsi04G009010Cucumber (Gy14) v1cgylsiB276
Lsi04G009010Cucumber (Gy14) v1cgylsiB299
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB244
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB616
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB676
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB677
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB686
Lsi04G009010Cucurbita maxima (Rimu)cmalsiB756
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB267
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB232
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB603
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB669
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB670
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB679
Lsi04G009010Cucurbita moschata (Rifu)cmolsiB751
Lsi04G009010Cucurbita pepo (Zucchini)cpelsiB152
Lsi04G009010Cucurbita pepo (Zucchini)cpelsiB358
Lsi04G009010Cucurbita pepo (Zucchini)cpelsiB359
Lsi04G009010Wild cucumber (PI 183967)cpilsiB052
Lsi04G009010Wild cucumber (PI 183967)cpilsiB195
Lsi04G009010Wild cucumber (PI 183967)cpilsiB366
Lsi04G009010Wild cucumber (PI 183967)cpilsiB459
Lsi04G009010Cucumber (Chinese Long) v2culsiB052
Lsi04G009010Cucumber (Chinese Long) v2culsiB196
Lsi04G009010Cucumber (Chinese Long) v2culsiB363
Lsi04G009010Cucumber (Chinese Long) v2culsiB452
Lsi04G009010Melon (DHL92) v3.5.1lsimeB281
Lsi04G009010Melon (DHL92) v3.5.1lsimeB300
Lsi04G009010Melon (DHL92) v3.5.1lsimeB308
Lsi04G009010Melon (DHL92) v3.5.1lsimeB332
Lsi04G009010Watermelon (Charleston Gray)lsiwcgB256
Lsi04G009010Watermelon (Charleston Gray)lsiwcgB280
Lsi04G009010Watermelon (Charleston Gray)lsiwcgB282
Lsi04G009010Watermelon (Charleston Gray)lsiwcgB295
Lsi04G009010Watermelon (97103) v1lsiwmB287
Lsi04G009010Watermelon (97103) v1lsiwmB301
Lsi04G009010Watermelon (97103) v1lsiwmB307
Lsi04G009010Watermelon (97103) v1lsiwmB330
Lsi04G009010Watermelon (97103) v1lsiwmB338
Lsi04G009010Cucumber (Gy14) v2cgyblsiB181
Lsi04G009010Cucumber (Gy14) v2cgyblsiB331
Lsi04G009010Cucumber (Gy14) v2cgyblsiB418
Lsi04G009010Melon (DHL92) v3.6.1lsimedB297
Lsi04G009010Melon (DHL92) v3.6.1lsimedB313
Lsi04G009010Melon (DHL92) v3.6.1lsimedB321
Lsi04G009010Silver-seed gourdcarlsiB080
Lsi04G009010Silver-seed gourdcarlsiB239
Lsi04G009010Silver-seed gourdcarlsiB405
Lsi04G009010Silver-seed gourdcarlsiB608
Lsi04G009010Silver-seed gourdcarlsiB916
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB058
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB214
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB308
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB387
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB390
Lsi04G009010Cucumber (Chinese Long) v3cuclsiB481
Lsi04G009010Watermelon (97103) v2lsiwmbB262
Lsi04G009010Watermelon (97103) v2lsiwmbB274
Lsi04G009010Watermelon (97103) v2lsiwmbB296
Lsi04G009010Wax gourdlsiwgoB347
Lsi04G009010Wax gourdlsiwgoB353
Lsi04G009010Wax gourdlsiwgoB366
Lsi04G009010Wax gourdlsiwgoB379
Lsi04G009010Bottle gourd (USVL1VR-Ls)lsilsiB077
Lsi04G009010Bottle gourd (USVL1VR-Ls)lsilsiB104
Lsi04G009010Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi04G009010Bottle gourd (USVL1VR-Ls)lsilsiB129