Lsi04G007090 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G007090
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Protein kinase superfamily protein
Location	chr04 : 6478326 .. 6484548 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTCATGCCCAACGGCTCGCTTCATGATTTGCTTCTCGCACCCGCACCCGCACCCATCACTTGGCCCAAACGCCTCCATATAATCACGCAGATTGCACGTGCGGTGCATTTTCTTCACCAAGCCAATCCATTAGTCATTCACAGAGACATCAAGGCTGAAAATATCCTCTTTGATTCTAATTGGGATCTCAAACTCGCAGATTTCGGGTTGGCGGTGTCCGCGACCTCCGATACAATCGGGTATTGATTTAAACCCTAAATTTTAGGTTAATGATTTTTATAGATATTTTTATGAGATTTTTATGTGGATGATCCAATACCGATAACTTGGATGCATATGACTCAGTCTTAAAAAAAACGAATAAAAATTAATACCTTACGTTTTAGAGCACTTCGGAGATGTCTCACAAGTTGGCATACTTTTGATTTAGAAAAAATATAGAAGGAAAGAAATGAATATCGTGTTTAGGAGACATCTCTAAATAGTGCTATATGACTTCTTAAATATTAGTTTTTGTTTGTTTTTAAGGATTGAGTTATTTACTATAAATAGGTATTTATATATATATATAAAATTGTTTTTATTTTATTTAATTTAAAATCATCAAATAAACTTATTATTTTCCTCCTAAAATCCCACAAGGTAGTAAGATTCACTGTAGATAATTATTTTTAAATAAGTAGAAGATGAGAAGAAAAGAAAATCCAAATATTATAAAGAATCACCACTAGCTAGCTATTTGATTAATGTATTTCTTTTTAGTTCACGTTAATACTTACATTTAAATAAATAATATACATGTATGAAAGTGATGTATTAATAGTTTTAAAATGAAATTTTAATAGAGAGTCTAAATTGTAGAGGAAATTATTAGAAATAAACTTCCAAAGTTTTTATTTTTCACAACTAGCAACCTTTAGAGGATTCATTAGAATAGTCTTTCTTGATCCTTCTTAACTGAATTCTACCACCAAGACCTGAATAATAATTTAACTTTTTCATTTTACATTTAAACTATCAATTTTTTGGACTTTTTCGGTGAAATATTGGCTAAGATGAACCTCGAGATTGTACACATAATGACAAATTATCCAAATGAATCTCGTTCATCACAGTATGATTTTTGGTTAAATTTTGGAAAAGATTAAATAAGATGAAAGATATATGATATCTTGGTCCACATTGACCGAAATTTTATTTAAAAAGTACAAAAAAAAATCGATAGTTTAGAGGCACGAGAAAAAAAAGTTAAATTTTTATTTAAATCTCAGTGTTTGATTTCCAGCCCAAAAATATCGGAAAACTATTTCAATGAATTCTCTACCAGCCGAAAAGATAAAACTTGTTTATACTTTGACAATTTGCTTGTCAAAATGTATGATTTAAATAATTATTATAATTTATTTATACAGCGGCGGCGGTAAACCCGCCGGAACAATCGGGTACTTGGATCCAAGTTACACGACGGCAAGCAAACTAAGCACAAAAAGCGACGTGTTCAGCTTCGGGGTGGTTGTATTAGAAGTGATTAGCGGCAGAAAAGCGATGGATATTTCAAAATCGCCGGCTTCGATTGTGGAGTGGGCGAGGCCATTGATCGAAGGGAAAAATTTCGAAGGAATTTACGACGGAAGAATGGCGGCGCTGCCGAAATGGGCGGAGGGAAGGCTGCGGAAAGTGGCGGAATTGGCCGGGCGGTGCGTTTGTGTAGAGCAGTGGCTACGGCCATCCATGGCGGAGATTGTGGAAGCCATGGAAATGGAAATGAGTAGTTGTTGTTGGTTTTGCATTATTCAATTTCAACCAACTAAGTTCTTTAGATTCATAATCAGAAGGAAAAAGAAGAAGGGGAAGAAATTAGTGGGATTGAGTCAAATGTTAGGTGTAATGTCCAATGAGCAATGAACCTAACCACGATACTCCCTTCTTTTTTATCATACAAATAAAGAAAATAAAAAATATATTTATTAAAAAAATAAAATTGTCACGGGACAATATTTCATTAGGTGTAATATGAAATATATAAAAGATGTGTGCATCCTAACCGCACCCAAATTTTTTCCGAATTAATTAGTTACAAAAACAAAGGTTGAAGAAGAGCCAGTCCAATTTCAATGGCGACAAAACACAAAGCCTCTGAAGTATTAGGTAAACCTACACATGACTTTGCCCAATTCATGGATTTCGTCTGTTTTGTTTTTTTTTTTTTTTTTGGTTTTTGCGTTTATTAGAAATAAAATATTTAGGTGCATCCCCGACTGCAACTATTTTTGTACATCCAATAAATTATTCAATCCTAATTTGTCATTCTTATTTTTTTTTTTTTTGGTTTTTGCGTTTATTAGAAATAAAATATTTAGGTGCATCCCCGACTGCAACTATTTTTGTACATCCAATAAATTATTCAATCCTAATTTGTCATTCTTATTTTTTTTTTTTTTGGTTTTTGCGTTTATTAGAAATAAAATATTTAGGTGCATCCCCGACTGCAACTATTTTTGTACATCCAATAAATTATTCAATCCTAATTTGTCATTCTTATTTTTTTTTTTTTTGGTTTTTGCGTTTATTAGAAATAAAATATTTAGGTGCATCCCCGACTGCAACTATTTTTGTACATCCAATAAATTATTCAATCCTAATTTGTCATTCTTATTTATTTTTTTTTTTGTGAGTAATGAGAAAGGCTGATAGATCACTCATAAAGTATTATCCAAGATAATATATATATATATTTAATTTTGGGTTTAATATCTATTTGATCACTGAATTTAAAAATATTATATTTTTAGTCAAATTTTGAGTTTGGTTTTAATTTAGTCTCTAGATTTCAAAAGATTACAATTTTACTGTTGAAATTTGAGGTTTTTTTTTAATTTATTCGGTAGATTTCAAGGTTTAAATTGTTATTTTGTATTTTTTACTAAATATTTACTTCCTATCTTTCTTGTTCATGTATATTAATTATTTTAAATGTATTAAAAGAATTAAGTTTTCTTATGGCTATTAAAATTAATTTTAAAATTTACTTTATAATTATTCTAAATTAATTAACAGACTTTAACATCAAAGACTAAAACTACAATTTAGTAGAAAATATGAGACTAAAAGTGTAAATCTTGAAATATGAAAACTAAATTCAAACAAAACTCAAATTTAGAGGTTAACATCTCTAGATCAAATTATAATCAAACTCAGAACTTAATGACTAAAAATATAATATTTTAAAATTTAGAGACCAAATAAAAATTAGACAGTTTATTTTATTGTGCTGGAATTAATTAGTGTGACATTTAATATTAAATTACTCTTTGTTTGAGGCAGTTGGGATTTCAAGCATTATTGATATGATGTTGAAGGTAGGCCTACGAACCCCCTCTACACTCCACTATGAAACCTCACAACTCAAACATAAAGTCTGAATTTAAATGGTGGTTGTAAATAATAGAATAGGCAATGCTCATATAATTAAATAAAGAGATTACTATAAATAGAGAAGTATCAAATTATTTATTAATATATAAATTTTTTACTATCGACAGTGGAATTTTTATATATTTATAAATAGTTTAACTCATTTTCTATATTTGAAAAGAGCTCAAAAAGCCCTTTGCATCATCTTTAACCACTAGTTTATATCTACCATCTCACAAAACCCAATAATACTCTCATCATAATAAAATGTCTATACCATTATTAGAAAATTTTCCAATACCTACTTTTTCTTCCCACTAAAAATTATATGTCTTCATAAATATATTATTTTGATACTAGTAGACCTTATTCACGTTGTTTTTAGAAAGCGGGTTAATATGGCAAATAATAAATAGAATACTACTTTAGTACTATAATTTTTTTTGCCATTATGCACTTCAAGTGCTTAATTATTATTGCGGTGATGTTTGCCACAAACCTTAGAATACTTAAAACAATTTAAATATTGAATTTGACATAATTTTAATATAGTAGAGATATGTTTTCGAAGCTTATTAATCTATTCTATATTTAAGAAAGGAAACATCTCAATCTATAGATTTAGGGTAGTTGAAGCTCTAAGCGTAACTTAATTACAAGCACTTATGTCTAATGTGAGTATGAGTTGCAGGTGTTGTGAGTGATTGTGATAGTGTAACTATTGTTAAAGATTGATTATTGTTGCATCTAAATGTGTCTTGTTTAGGTGTAGATTAGTGCAACAACAGTACAACACTATAGTTTATGATGTCTTACTATAGTTTAAAGTTGGCTTAGTGGTAGTGGAAAACATAAAACAAAAAAATCAAAGAGTTAAGGGATCATTGATTCAATCCATGTTGACCACTTACCTAAGATTTAATGTCCTACGAATTTCCTTGACATCCAAATGTTGTAGGATCAGGCGAGTTTTGTCATGAGATTAGTCGAGGTGTGCATAAGTTGATTCGGATACTCGTGAATATAAAAATAATAATAATAATAATAAATGTGAATATATATATATATCAAGCATAACACTTCATTGAAACTAAAGGACAAAATATCAACTTGTCGCAGATTTCAAAGTCTTGTAGAGCTAGACTCTCCCTAATTAATTTGTTGTAATTCAAAAAGTATATAGATATAAAAACTTAAATTTTGTAGTTTTTCTCTAATTTGCGCCTCCTCTCCCTCTTTTTTTTTTTTTTTTTAATTTATTTTTAATACAAATAGTTAGCATATGTAAAAAAATAAAAATAAAAATAAAGGCTTCCTTTTTCTTGGGTATTGGTCTAAGAGAAAATTTTCACTTCTATTGAAGTGCGGAAACTTTTTCGTAATTCATTCCTTTATTGTATGTCACATTAGGATGCTTTTAAAAATAGAGTGATCAACTAACATTGGTATAGGATTCACTATATTTATGAAGACAAATCTAATTGTTAAGAAATTGACAATTAAATATGAACAAAAAAATGAAAAGCAATAGAAAATTGACACACAGATTTACGTAGTTCACTGATAGTGTGTTAGCTACGTCCACGGGCAGAAAGAGAGATCCATTTTGTTAGAGATAAAAGTTTAGATTACAGATCAAGAGACACATCTAAGGTTAGAGAGTTTATATAATGTACTTCTCTAAACCCTATGGCCAAAATCGTAAATAACGTAAATGACACCAATACAAAAACAACTAAGGTTTCAGGGGCATTGCCCCCTGAACCCCCACTAGGGCGTGTCACTCATAGACTCTATATTTGGTCATTCGGAGCGCCAGATAATAGATTTAAGGCATTTCAACACTAATGTATGGTACTCTTGTAGTATTAGAAAAATTCAGCTCGATTATTCCTCATAAAAACTTGCCTAAAAAATGTTATGGGTATCGCATTATGGAGTACAACAACAAACACACTATTGGTCACGTTGTCTCACGTACTAAACGACTTTTAATATGATTTCATTGACTTATTGGATTTTAATTAATACTTATGATTAATTAATTAATATGATTTCATCGCATTTATTTTAGGTTGGCAATTATCGTTGTAATTCATAAAGTATTTAAAATACTTATAAAGTTGTAGTTCTCTTTTAGATAATTTGTTTTATCTATTTAAAATTTTAGATTGAAATGAAACATTTTATATAGAGTTAGCATGCAAAATTTTGTTCTTTAAGAAAATCCGACCGTACTTGAGAGTTGAGTGACTTATGGTTCATATCTCACTTATTGACCTACTTAGATTGGTATGTTCTACGTGTCTCTCTCGCTTGGAATATGATGCATCTAGATGTTCCAAGACTCACTTAACTAGTTGATTTCTAATTACTCTATGCTAAGTTGGTTTGACTCATATCTGCAAACTTTATGATCTCATAAATTAATTTAGCTTTCAATTCTCATTTACCTATTACTTTGCATGCTAGATCTAGTGTGCTAGTATGTTGTACCTTATAGTAGGGTGCACGTAAATTATTTTAGGTTTTCTACATTAATAGCCTAATTAAATAGGTCGAATTATAAAAATGTTTTACCTTTACTATTTTTTTTTTATGAATAGCCTAATAAGCTATGATATTAGATAAAAATCAAGAGCAACAATTTTAAAAATCTTTCATAATTTTATTAAATAAAACAATTTGGTCTAACAAGTTTAAGTTAGAAATTTGATAACAAGCCAATGAATGTATGTTTTGAGCCCAAACCCAATTGACAGACTTGGATCTGGCCCAATCCGCTAACAACGATATTAATTGA

mRNA sequence

ATGGACGGCGGCGGTAAACCCGCCGGAACAATCGGGTACTTGGATCCAAGTTACACGACGGCAAGCAAACTAAGCACAAAAAGCGACGTGTTCAGCTTCGGGGTGGTTGTATTAGAAGTGATTAGCGGCAGAAAAGCGATGGATATTTCAAAATCGCCGGCTTCGATTGTGGAGTGGGCGAGGCCATTGATCGAAGGGAAAAATTTCGAAGGAATTTACGACGGAAGAATGGCGGCGCTGCCGAAATGGGCGGAGGGAAGGCTGCGGAAAGTGGCGGAATTGGCCGGGCGGTGCGTTTGTGTAGAGCAGTGGCTACGGCCATCCATGGCGGAGATTGTGGAAGCCATGGAAATGGAAATGAACTTGGATCTGGCCCAATCCGCTAACAACGATATTAATTGA

Coding sequence (CDS)

ATGGACGGCGGCGGTAAACCCGCCGGAACAATCGGGTACTTGGATCCAAGTTACACGACGGCAAGCAAACTAAGCACAAAAAGCGACGTGTTCAGCTTCGGGGTGGTTGTATTAGAAGTGATTAGCGGCAGAAAAGCGATGGATATTTCAAAATCGCCGGCTTCGATTGTGGAGTGGGCGAGGCCATTGATCGAAGGGAAAAATTTCGAAGGAATTTACGACGGAAGAATGGCGGCGCTGCCGAAATGGGCGGAGGGAAGGCTGCGGAAAGTGGCGGAATTGGCCGGGCGGTGCGTTTGTGTAGAGCAGTGGCTACGGCCATCCATGGCGGAGATTGTGGAAGCCATGGAAATGGAAATGAACTTGGATCTGGCCCAATCCGCTAACAACGATATTAATTGA

Protein sequence

MDGGGKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMNLDLAQSANNDIN

Homology

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BLAST of Lsi04G007090 vs. Swiss-Prot
Match: CCR12_ARATH (Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana GN=At1g28390 PE=2 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 4.0e-23
Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDPSY   + L+ KSDVFSFG+++LE+ISGR+A+D++ SP+ IV+WA PLI+ 
Sbjct: 223 PAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAIDLNYSPSCIVDWAVPLIKR 282

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMNLDLA 126
            +++ I D ++   P +A   +RK+A +A RCV      RP M E+VE ++    L  A
Sbjct: 283 GDYDAICDLKIKNRPYYAV--IRKLAVMAARCVRSTAKKRPDMLEVVECLKTVRQLSPA 339

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BLAST of Lsi04G007090 vs. Swiss-Prot
Match: CCR35_ARATH (Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana GN=At3g51990 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 1.7e-21
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDP Y TA +LSTK+DVFSFG+++LE+ISGRKA+D+  SP+ IV+WA P+I+ 
Sbjct: 222 PAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYSPSFIVDWAIPMIKR 281

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIV 114
               GIYD R+   P         +  +A +CV   +  RP M E+V
Sbjct: 282 GKIGGIYDPRIG--PPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVV 326

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BLAST of Lsi04G007090 vs. Swiss-Prot
Match: CRI4_MAIZE (Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 2.7e-19
Identity = 53/116 (45.69%), Postives = 75/116 (64.66%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDP Y     L+TKSDV+SFGVV+LE++SGRKA+D+     +IVEWA PLI+ 
Sbjct: 671 PAGTLGYLDPEYYRLHYLTTKSDVYSFGVVLLEILSGRKAIDMQFEEGNIVEWAVPLIKA 730

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMNL 123
            +   I D  ++  P      L+K+A +A +CV +    RPSM ++  A+E  + L
Sbjct: 731 GDIFAILDPVLS--PPSDLEALKKIASVACKCVRMRGKDRPSMDKVTTALEHALAL 784

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BLAST of Lsi04G007090 vs. Swiss-Prot
Match: STPKL_ARATH (Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana GN=At5g23170 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.0e-18
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGTIGYLDP YT    LS K+DV+S+GVV+LE++S RKA+D+S+SPASIV+WA PLI+ 
Sbjct: 188 PAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAIDVSRSPASIVDWAVPLIKE 247

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEI 113
                I  G       +  G   ++  +A RCV  +   RP   EI
Sbjct: 248 GRIGEICGGGGGGSGVF-RGMSLRLLRMAARCVSSDVESRPCFGEI 292

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BLAST of Lsi04G007090 vs. Swiss-Prot
Match: ACR4L_ARATH (Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR4 PE=1 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.1e-18
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDP Y     L+TKSDV+SFGV++LE++SGRKA+D+     +IVEWA PLI+ 
Sbjct: 678 PAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIKA 737

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAME 118
            +   + D  +   P   E  L+++  +A +CV +    RPSM ++  A+E
Sbjct: 738 GDINALLD-PVLKHPSEIEA-LKRIVSVACKCVRMRGKDRPSMDKVTTALE 786

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BLAST of Lsi04G007090 vs. TrEMBL
Match: A0A0A0KV79_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587120 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 3.3e-48
Identity = 103/119 (86.55%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 3   GGGKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP 62
           G  KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP
Sbjct: 181 GSRKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP 240

Query: 63  LIEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 122
           LIE   F+GIYD RM  LPKWAE RLRKV ELAGRCVC E  +RPSMAEIVEAMEMEM+
Sbjct: 241 LIEQNKFQGIYDERM-TLPKWAERRLRKVVELAGRCVCAEPGMRPSMAEIVEAMEMEMS 298

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BLAST of Lsi04G007090 vs. TrEMBL
Match: A0A061DXS0_THECC (Kinase APK1B, chloroplast, putative OS=Theobroma cacao GN=TCM_006251 PE=3 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 3.2e-27
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           +PAGT+GYLDPSYT   KLSTK+DVFS GVV LE+ISGRK +D+SK+PASIVEWA PL+E
Sbjct: 187 QPAGTLGYLDPSYTAPDKLSTKNDVFSLGVVFLEIISGRKVIDVSKAPASIVEWAIPLVE 246

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAME 118
            +   GI D R+   P + EG +R++  +  RC+   +  RPS+ EIV AME
Sbjct: 247 KQRLTGICDPRV-PFPTYMEGVIRRILSVTSRCLSENEARRPSIGEIVMAME 297

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BLAST of Lsi04G007090 vs. TrEMBL
Match: U7E2I9_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0022s00890g PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-26
Identity = 68/125 (54.40%), Postives = 89/125 (71.20%), Query Frame = 1


Query: 2   DGGGKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWAR 61
           D   +PAGTIGYLDPSYTT SKLSTK DVFS+GVV+LE+IS +K +DIS+SP+SIVEWA 
Sbjct: 183 DHATQPAGTIGYLDPSYTTPSKLSTKIDVFSYGVVLLEIISCQKVIDISRSPSSIVEWAV 242

Query: 62  PLIEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 121
           PLIE +    I D R+ ALP + EG ++ +  +A RCV   +  RPS+ EIV+ M+    
Sbjct: 243 PLIEEQRLMEICDTRI-ALPTFMEGTIKHLLYVAARCVSCREENRPSITEIVKGMDKNCL 302

Query: 122 LDLAQ 127
           ++  Q
Sbjct: 303 VERVQ 306

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BLAST of Lsi04G007090 vs. TrEMBL
Match: A0A0D2QA47_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G214800 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-26
Identity = 62/112 (55.36%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           +PAGTIGYLDPSYT  +KLSTK+DVFSFGVV+LE+IS RK +D++K+PASIVEWA PL++
Sbjct: 179 QPAGTIGYLDPSYTAPNKLSTKNDVFSFGVVLLEIISCRKVIDVTKAPASIVEWAIPLVK 238

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAME 118
            +    I D R+   P + E R+R++  +A RC+  ++  RPS+ EI+ AME
Sbjct: 239 KQRVVEICDSRI-PFPMYMESRIRRILSVASRCLSDKEERRPSIGEIIVAME 289

[Close]

BLAST of Lsi04G007090 vs. TrEMBL
Match: B9SSP3_RICCO (Protein kinase APK1B, chloroplast, putative OS=Ricinus communis GN=RCOM_1375290 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.7e-26
Identity = 63/113 (55.75%), Postives = 83/113 (73.45%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           +PAGTIGY+DPSYT  SKLSTK+DVFS+GVV+LE+ISGRKA+D+++SP S+VEWA PLI 
Sbjct: 190 QPAGTIGYMDPSYTIPSKLSTKNDVFSYGVVLLEIISGRKAIDVNRSPTSVVEWAVPLIL 249

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEM 119
            +    I D R+   P + EG +R +  +A RCV   +  RPS+ +IV AM M
Sbjct: 250 KEGLMEICDTRIGLPPPFIEGTIRHLLYVAARCVSSNEENRPSIGDIVMAMGM 302

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BLAST of Lsi04G007090 vs. TAIR10
Match: AT1G28390.2 (AT1G28390.2 Protein kinase superfamily protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24
Identity = 56/119 (47.06%), Postives = 82/119 (68.91%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDPSY   + L+ KSDVFSFG+++LE+ISGR+A+D++ SP+ IV+WA PLI+ 
Sbjct: 223 PAGTLGYLDPSYLAPADLTAKSDVFSFGILLLEIISGREAIDLNYSPSCIVDWAVPLIKR 282

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMNLDLA 126
            +++ I D ++   P +A   +RK+A +A RCV      RP M E+VE ++    L  A
Sbjct: 283 GDYDAICDLKIKNRPYYAV--IRKLAVMAARCVRSTAKKRPDMLEVVECLKTVRQLSPA 339

[Close]

BLAST of Lsi04G007090 vs. TAIR10
Match: AT3G51990.1 (AT3G51990.1 Protein kinase superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 9.6e-23
Identity = 53/107 (49.53%), Postives = 72/107 (67.29%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDP Y TA +LSTK+DVFSFG+++LE+ISGRKA+D+  SP+ IV+WA P+I+ 
Sbjct: 222 PAGTMGYLDPDYVTADRLSTKTDVFSFGILLLEIISGRKAIDVRYSPSFIVDWAIPMIKR 281

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIV 114
               GIYD R+   P         +  +A +CV   +  RP M E+V
Sbjct: 282 GKIGGIYDPRIG--PPIDVSVRNHLGLVAAKCVRTCREKRPGMEEVV 326

[Close]

BLAST of Lsi04G007090 vs. TAIR10
Match: AT5G23170.1 (AT5G23170.1 Protein kinase superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 5.8e-20
Identity = 51/106 (48.11%), Postives = 67/106 (63.21%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGTIGYLDP YT    LS K+DV+S+GVV+LE++S RKA+D+S+SPASIV+WA PLI+ 
Sbjct: 188 PAGTIGYLDPCYTLPENLSMKTDVYSYGVVLLEIVSCRKAIDVSRSPASIVDWAVPLIKE 247

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEI 113
                I  G       +  G   ++  +A RCV  +   RP   EI
Sbjct: 248 GRIGEICGGGGGGSGVF-RGMSLRLLRMAARCVSSDVESRPCFGEI 292

[Close]

BLAST of Lsi04G007090 vs. TAIR10
Match: AT3G59420.1 (AT3G59420.1 crinkly4)

HSP 1 Score: 92.0 bits (227), Expect = 2.9e-19
Identity = 49/111 (44.14%), Postives = 72/111 (64.86%), Query Frame = 1


Query: 7   PAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIEG 66
           PAGT+GYLDP Y     L+TKSDV+SFGV++LE++SGRKA+D+     +IVEWA PLI+ 
Sbjct: 678 PAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMHYEEGNIVEWAVPLIKA 737

Query: 67  KNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAME 118
            +   + D  +   P   E  L+++  +A +CV +    RPSM ++  A+E
Sbjct: 738 GDINALLD-PVLKHPSEIEA-LKRIVSVACKCVRMRGKDRPSMDKVTTALE 786

[Close]

BLAST of Lsi04G007090 vs. TAIR10
Match: AT4G32710.1 (AT4G32710.1 Protein kinase superfamily protein)

HSP 1 Score: 90.1 bits (222), Expect = 1.1e-18
Identity = 48/130 (36.92%), Postives = 79/130 (60.77%), Query Frame = 1


Query: 9   GTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAM--DISKSPASIVEWARPL--- 68
           GT GY+ P Y ++ K++ KSDV+SFGVV+LE+I+GR ++    S +  S+V+WARPL   
Sbjct: 211 GTFGYMAPEYASSGKVTDKSDVYSFGVVLLELITGRPSIFAKDSSTNQSLVDWARPLLTK 270

Query: 69  -IEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMNL 128
            I G++F+ + D R+     +   ++  +A  A  C+    WLRP M+++V A+E E+ L
Sbjct: 271 AISGESFDFLVDSRLE--KNYDTTQMANMAACAAACIRQSAWLRPRMSQVVRALEGEVAL 330

Query: 129 DLAQSANNDI 133
              +   N +
Sbjct: 331 RKVEETGNSV 338

[Close]

BLAST of Lsi04G007090 vs. NCBI nr
Match: gi|659090397|ref|XP_008445994.1| (PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X1 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 7.3e-49
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE
Sbjct: 183 KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 242

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 122
              FEGIYD RM ALPKWAE RLRKV ELAGRCVC EQ +RPSM EIVEAMEMEM+
Sbjct: 243 QNKFEGIYDERM-ALPKWAERRLRKVVELAGRCVCAEQGMRPSMGEIVEAMEMEMS 297

[Close]

BLAST of Lsi04G007090 vs. NCBI nr
Match: gi|659090399|ref|XP_008445995.1| (PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X2 [Cucumis melo])

HSP 1 Score: 201.8 bits (512), Expect = 7.3e-49
Identity = 104/116 (89.66%), Postives = 106/116 (91.38%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE
Sbjct: 182 KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 241

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 122
              FEGIYD RM ALPKWAE RLRKV ELAGRCVC EQ +RPSM EIVEAMEMEM+
Sbjct: 242 QNKFEGIYDERM-ALPKWAERRLRKVVELAGRCVCAEQGMRPSMGEIVEAMEMEMS 296

[Close]

BLAST of Lsi04G007090 vs. NCBI nr
Match: gi|449435124|ref|XP_004135345.1| (PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X2 [Cucumis sativus])

HSP 1 Score: 199.5 bits (506), Expect = 3.6e-48
Identity = 103/118 (87.29%), Postives = 106/118 (89.83%), Query Frame = 1


Query: 4   GGKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPL 63
           G KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPL
Sbjct: 181 GRKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPL 240

Query: 64  IEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 122
           IE   F+GIYD RM  LPKWAE RLRKV ELAGRCVC E  +RPSMAEIVEAMEMEM+
Sbjct: 241 IEQNKFQGIYDERM-TLPKWAERRLRKVVELAGRCVCAEPGMRPSMAEIVEAMEMEMS 297

[Close]

BLAST of Lsi04G007090 vs. NCBI nr
Match: gi|778704493|ref|XP_011655545.1| (PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X1 [Cucumis sativus])

HSP 1 Score: 199.1 bits (505), Expect = 4.8e-48
Identity = 103/119 (86.55%), Postives = 106/119 (89.08%), Query Frame = 1


Query: 3   GGGKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP 62
           G  KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP
Sbjct: 181 GSRKPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARP 240

Query: 63  LIEGKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAMEMEMN 122
           LIE   F+GIYD RM  LPKWAE RLRKV ELAGRCVC E  +RPSMAEIVEAMEMEM+
Sbjct: 241 LIEQNKFQGIYDERM-TLPKWAERRLRKVVELAGRCVCAEPGMRPSMAEIVEAMEMEMS 298

[Close]

BLAST of Lsi04G007090 vs. NCBI nr
Match: gi|590682373|ref|XP_007041331.1| (Kinase APK1B, chloroplast, putative [Theobroma cacao])

HSP 1 Score: 129.4 bits (324), Expect = 4.6e-27
Identity = 64/112 (57.14%), Postives = 82/112 (73.21%), Query Frame = 1


Query: 6   KPAGTIGYLDPSYTTASKLSTKSDVFSFGVVVLEVISGRKAMDISKSPASIVEWARPLIE 65
           +PAGT+GYLDPSYT   KLSTK+DVFS GVV LE+ISGRK +D+SK+PASIVEWA PL+E
Sbjct: 187 QPAGTLGYLDPSYTAPDKLSTKNDVFSLGVVFLEIISGRKVIDVSKAPASIVEWAIPLVE 246

Query: 66  GKNFEGIYDGRMAALPKWAEGRLRKVAELAGRCVCVEQWLRPSMAEIVEAME 118
            +   GI D R+   P + EG +R++  +  RC+   +  RPS+ EIV AME
Sbjct: 247 KQRLTGICDPRV-PFPTYMEGVIRRILSVTSRCLSENEARRPSIGEIVMAME 297

The following BLAST results are available for this feature:

BLAST of Lsi04G007090 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CCR12_ARATH	4.0e-23	47.06	Serine/threonine-protein kinase-like protein At1g28390 OS=Arabidopsis thaliana G...	[more]
CCR35_ARATH	1.7e-21	49.53	Serine/threonine-protein kinase-like protein At3g51990 OS=Arabidopsis thaliana G...	[more]
CRI4_MAIZE	2.7e-19	45.69	Putative receptor protein kinase CRINKLY4 OS=Zea mays GN=CR4 PE=2 SV=1	[more]
STPKL_ARATH	1.0e-18	48.11	Serine/threonine-protein kinase-like protein At5g23170 OS=Arabidopsis thaliana G...	[more]
ACR4L_ARATH	5.1e-18	44.14	Serine/threonine-protein kinase-like protein ACR4 OS=Arabidopsis thaliana GN=ACR...	[more]

BLAST of Lsi04G007090 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KV79_CUCSA	3.3e-48	86.55	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G587120 PE=4 SV=1	[more]
A0A061DXS0_THECC	3.2e-27	57.14	Kinase APK1B, chloroplast, putative OS=Theobroma cacao GN=TCM_006251 PE=3 SV=1	[more]
U7E2I9_POPTR	2.7e-26	54.40	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0022s00890g P...	[more]
A0A0D2QA47_GOSRA	2.7e-26	55.36	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G214800 PE=3 SV=1	[more]
B9SSP3_RICCO	2.7e-26	55.75	Protein kinase APK1B, chloroplast, putative OS=Ricinus communis GN=RCOM_1375290 ...	[more]

BLAST of Lsi04G007090 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G28390.2	2.3e-24	47.06	Protein kinase superfamily protein	[more]
AT3G51990.1	9.6e-23	49.53	Protein kinase superfamily protein	[more]
AT5G23170.1	5.8e-20	48.11	Protein kinase superfamily protein	[more]
AT3G59420.1	2.9e-19	44.14	crinkly4	[more]
AT4G32710.1	1.1e-18	36.92	Protein kinase superfamily protein	[more]

BLAST of Lsi04G007090 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090397\|ref\|XP_008445994.1\|	7.3e-49	89.66	PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X1 [Cu...	[more]
gi\|659090399\|ref\|XP_008445995.1\|	7.3e-49	89.66	PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X2 [Cu...	[more]
gi\|449435124\|ref\|XP_004135345.1\|	3.6e-48	87.29	PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X2 [Cu...	[more]
gi\|778704493\|ref\|XP_011655545.1\|	4.8e-48	86.55	PREDICTED: serine/threonine-protein kinase-like protein At5g23170 isoform X1 [Cu...	[more]
gi\|590682373\|ref\|XP_007041331.1\|	4.6e-27	57.14	Kinase APK1B, chloroplast, putative [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006468	protein phosphorylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0005524	ATP binding
GO:0004672	protein kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR011009	Kinase-like_dom_sf
IPR001245	Ser-Thr/Tyr_kinase_cat_dom
IPR000719	Prot_kinase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004672	protein kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G007090.1	Lsi04G007090.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000719	Protein kinase domain	PROFILE	PS50011	PROTEIN_KINASE_DOM	coord: 1..122 score: 8
IPR001245	Serine-threonine/tyrosine-protein kinase catalytic domain	PFAM	PF07714	Pkinase_Tyr	coord: 11..115 score: 2.
IPR011009	Protein kinase-like domain	unknown	SSF56112	Protein kinase-like (PK-like)	coord: 8..121 score: 1.07
None	No IPR available	GENE3D	G3DSA:1.10.510.10		coord: 7..124 score: 7.6
None	No IPR available	PANTHER	PTHR27001	FAMILY NOT NAMED	coord: 7..119 score: 5.5
None	No IPR available	PANTHER	PTHR27001:SF45	SUBFAMILY NOT NAMED	coord: 7..119 score: 5.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G007090	Csa5G587120	Cucumber (Chinese Long) v2	culsiB368
Lsi04G007090	CSPI05G21190	Wild cucumber (PI 183967)	cpilsiB368
Lsi04G007090	Cucsa.076010	Cucumber (Gy14) v1	cgylsiB076
Lsi04G007090	CmoCh04G019510	Cucurbita moschata (Rifu)	cmolsiB661
Lsi04G007090	Cla022940	Watermelon (97103) v1	lsiwmB339
Lsi04G007090	MELO3C011836	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G007090	ClCG11G013390	Watermelon (Charleston Gray)	lsiwcgB264
Lsi04G007090	MELO3C011836.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G007090	Cla97C11G219320	Watermelon (97103) v2	lsiwmbB271
Lsi04G007090	BhiUN887G11	Wax gourd	lsiwgoB351
Lsi04G007090	CsGy5G020670	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G007090	Carg24414	Silver-seed gourd	carlsiB122
Lsi04G007090	CsaV3_5G029910	Cucumber (Chinese Long) v3	cuclsiB393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G007090	Cucurbita maxima (Rimu)	cmalsiB383
Lsi04G007090	Cucurbita maxima (Rimu)	cmalsiB670
Lsi04G007090	Cucurbita moschata (Rifu)	cmolsiB365
Lsi04G007090	Cucurbita moschata (Rifu)	cmolsiB366
Lsi04G007090	Cucurbita pepo (Zucchini)	cpelsiB030
Lsi04G007090	Cucurbita pepo (Zucchini)	cpelsiB031
Lsi04G007090	Cucurbita pepo (Zucchini)	cpelsiB353
Lsi04G007090	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G007090	Silver-seed gourd	carlsiB629