Lsi04G006490 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G006490
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 5940180 .. 5945034 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCATGTTGGAATTTATTAAACAAATCAAAGGTTGATAATTGAGTTCGTGTGAATTATGAGTTTTCTAATTTTTATTTATTTCTTTTACCTAGCACTACTTTATTTATTTAGAAGTTAACTATGCGATAAGTTTACAAGATTCCTTACATATAAATGTAAGGGGCATTTTTTGTGTTATATATATATATATATATGGGAAGTTATTTGTATTATCATATTCTAGCAAAGCATGCATGAAAAATATGGACGAAAAGGGTAGTTGTGTAAAATAGCAAACAATTGGAAAAATTCAACCCAAAAAATTCAAGTAAACTAAGAGAAACTAAATTTGGTTGGGTAAGAAAAGTTGGTTATTTTAATAAATATTAGACATAAGTTAGAAGAGATTCTGTTGGGATAACTTGGAGGATAAGATTGGCATAGTTTCAATGGTATTTGCTCAATTGTTTCCATAGCAAATCCAACAGGTAGGTAAAGGGTCCCATTTTCTCATCTGTCTTCAATTTTCTCCAATCATTTTCAATACAAAATGGTCCTTTTTTTTTATGATTTAGTCAAATCTCAAGTTTCCTTCTTTAATTAAAGTAATAAAATATTAATTATATACAAGAAAATAGAGATACCCTCAAATCTAAGGGGTTGTTTGATGGCGTAGGCTATAATAGTCCACTCTATGTTCCGGGCTCCAAATATAATAGAGGTGTTTACAACTATTTATAACTTACAATTAAAGTTTAAATCCTATTTTGGTCCATGAATTTTGAATCTTGTTCTATCTTGGTCCCTACATTTTAAAAAACATTTGTTTTAGTCTCTAAACTTTTAAAAAGTGTTTATTTTAGTCTCTACTATTAAAATTATGTTAACTCTTCAATATATATGTGAGGGAGCTTGTATTTTTGGATGACTAAGCTCTATATGTATTGAGCAAGATGAAGGTGAAGTAAAATGCCAACAACCAACAGCCCGACCAAAATTTTGAACTAAAAATGTCTTTTAAATTTTTCCACTTTGCCACCTTATCAAAAATTAAATCTCTAGATTTTTAGCGTAGTAATTATTTGGTAGCTTAGTCATTCAAAAATATAAGTCACCTAAGCATTTTGTTAAAAAGTTGACAAAATCTTAATATAACAGAGACTAAAATAAACACTTTTTCAAAGTTCAGGGACTAAAATAAACATTTTTAAAAATTTAAGGACCAAAATAAAACAATATTCAAAGTTGAGAGACTAAGATGGACATTTTTAAAACTTTAGGGATCAAAATATAACATTATTCAAAGTTCAAGGACCAAAATAAGATTTAAACCTACAATTAACTACAATAATACTATTTGAAATCTCTCTTTGAATAGTAGACATCTCAAACATAGACTATTATAACCTATAGACTATAATAACCAACTCTGCACATCAAATACCCCTAAAATATTAAAAAGGCTTTGAATGGACAGAACTTTCTCAAGGATTTGATAAAACAACCATAAAACATAATGTAATTATCAATTAATATATAATTATTTCAAAGCTTTCTTAGTCGCAACTTGGGAGACAAGTCAGATCTTTTCTTTCTTGCATTGCACGAAGAAGCATCTCCTCCACATGCAAGCTACGAAGTTTCCTTCAAGTAATTCAAGCTGAAACTTCTATGGAAATCTTGTCTCACAATTCAAGCAACACCCTGAGGATAAGATTAAACTCAAACGCTACAAAATTGAAGTGGTCTCATAAACATGTTGAATTGCACTGTTAAAATAGTTAGATCTAAATTCAAAGAACATGCTGATGTGGTGACATAACATTTAGAATGCTCACTAAAACATATAACATAAAATTGATCAAATACCAGATTCTCCAAGAAAAAAGAATCCCAAAATTTGAACCAGGATTTCTTAGTTTAATTCCTAGACTTCTTTTTCGAAGACTTCGATGAAGGCTTGGATTGCTCAGAGCCTGTGTTTTGGTTGCCTTTCGAACTCGTTGCCTGGTTAGATTTTGAATTTGCATTGCTGGAACTGCCTCCAGAGACACCAGTTTCATGTTTTTCTCTAACCACTGCTCCTTGGGAACCTCTCACCTGGGCAGCTCTCTTATCTTTTCGCTTGGGTCTATAGCTTGATCTCTCTCTCCTGGGAAGCCACCTTTCTGGATCAGGGGGAGGACCTGGATTTGCAGGATCAAATCCTTTAGGATATCTTGGCTTTCTCTTTCTCTTTTTCTTTGATTTGGTCTTGTTTTTATCCACCATGTAGGCATCAGATGCTCCAAGATCAGCAGCATTCTCAACATGTTTTGCTCCGGAAGTCCTCTCCAGATTCTCCACATCAACCTCCTTCAAGCCTGGTAATGGCTTCAACTGCTTCTCATATGTTTCTGCCTTCTTAATATCCACACGAGCAACTGTCTTGACCAATCCAGCCAATGCTTCTATACTTCCATGACTTTTAACGAGCTCTTCATATAATTTGGCAGCATCTTCTTCACGGCCATGCTTCAGCTTGAAGGAAGCTGCTTCCTGCAATACAACATCAAGCTTGTTGTCTTCAGTCATGGCATTTGACCACCATTTGACTGCAGAGTCGAGCACGGCAATAGCTCCATCAACATCTCCAGCACGTTCTTTGAGAGACACAAGTGTAGCAATGGTGGCAGGCATGTGCTGAATATCATGTATCTTAGAAAGGGACTCGAATGCAATATGAGGATGGCCTGCAGCCGCAGCAACCTGCGCCCTTGCTAGGAGAACCAACTTGGACTTATCTGGGAAATTTTCAGCAAACTGACCCAAAATTTCTTCAGCTTTCCCAGCTTTATTCTCTCTTACTAATACAGCCGCTTGAAGCAGTACAGGGGTCACACTGTTTGGAAACATATCTGCCAGAGTTGCAACCATTTCTCGAGCCTGGAACATGAAAAAGAGGTCTTTCAAGCAGATGCAGGCCACAAAATAATTAAATAATCAATATGTTGCTACAAGGAGATTTCTATTCCCACCAATCATTATTTCATTTAAAAATTTTATGCATACATAGAGTTGCAGAAAGTTATAAAGTTCAAAAGAAAATGTAGGATATAAAATGACCTGATCCATCTTATTAGCATGGAGAAGGAGAAGGAAACGGTTTGCATATATTGTTTCCCTTTGTTTTTGGGAAATCTTTGGTTCAAGTCCACGAGCAAGTCGGAAGTTTGGTGCATCTTTCTCTTTTAGCTTATCCAGTTTTCTAAGGCCATCGGAAATATCTTTTGGACCTTTCAATGCAATAAGATTGTTCACTGCCACTGCAAGCGAAGATTCATCTGCCAAATCTCGATTAATGATGTCTTTGTAAGCTTCAGAGGCTTCTGATGTGTGACCAAGAAGCTGATTAATAGATAAATTGGGATTACATGATTGAATACCTCAAGTGATCAAGGAAAAGTAAAAACATTCATTTTGTCAATGAAGTTACCTGCTGCAAGTATGCCAGTTGGACAGCTATTGGGGATAGCTCAATCTCAATATCTTCATCAGGCAAATTCTCTTCCATGAGTGTTTCTTGACCAATTCTGACAAGAGCATGCAAAGTAGAACCAGAAACGTTAGTTTAAAGGAAAACTAATTTTAAGAATAAATGGAGAACTTCAAGTAAAACAAAGATATAGTACAACCACTTAAAACATTTCTAACAACGAGTAACAGTAACAGTGCTAAATACGTATGTAAATTGATACTCAAATACTTAGTCACTTGTCTGTCATGCTACCATTGAGCACCAAAAGCTAGAAACTAACTATTTTTATGAACTTATGTACATAAACATATTACCTTCGAGCTGACAGTAACAGTTGTTCTGCATCTGTATACTTGTTCACGTCAACTAAGGAACATGCAGTATTGTATGCCAACTCAAAGCTACTGGTAGCTTTCACTCTAAGAGCCTCCATGGCTCCTTGCACTTCAAAGGCTCGCCCAGCTGCAGTTAAAGCTGCAACATAATTTATTTCTAAAGAATCAATCTTTGATTTTGCGAGCTTCTGATAAGTGTCCACGCAAGCATCCATTTTTCCTAAACGATATAAGATCTGGGATTCCAATAGCATCGTCATTGAGTTTCTCTCTTGGTCTCTCAAGGAACCCAAAGCTTCATCTAACTTATTTTGCCTGTATAGGCAGTATGCCTATTTTTTAAAAAGAAATGTAAACAGCACAAAATGAGTTAGTTGGTTGTGTGGGGGCACAATTACATGACTGCATGAATCTAGAGAAAGAAGATAAAAAGAATCAACCAATGTTGTTCGGTCTTAAAGGGTAATTAAGGGTTTTTTAGAATTTGATAGTGGAAACTCCTTAATGTTGGCAAGGAAAAGAAACCAGTGCAAAGATATAAATAAGAACAGAAACAGATTTAACAAAACACATTAGTTTCACACCTCCATTAACTAGTGAGTTCGTTTGAAATTTACATCAAACCAACAACTGCAATGTAGTCTAGTAGAAGGATCCTGCAAAATCTAATCAGTTTTATGCTTACATATTATTATTCTTTACTGAACTTCAAGAACTGCAAGCCAATCAATCCAGATTAAAAAGCCTATCTAAAGTAAACAAGAAGACAACGTTGGAGGAAGATGTTAATCTTAGGTACTCAAGCTATATCTTCACTTGCTAACCTTAACCGTAATCTCATTCAAGTTAATTGAGTATGAAGGCTCAACACTCCCAACAACATCAAGATTTGTAAACTGTTAAGCTCCACAAAATCGAAAACAGAACGAAATGAAAGCAAAATTTATGTATCCTTCTACCATTGTGTTAGTTTCATTTTCTTTTGACTATTGTTTTCAGCTGCATCAAATAATTCTATGA

mRNA sequence

ATGTTCATTCGCAACTTGGGAGACAAGTCAGATCTTTTCTTTCTTGCATTGCACGAAGAAGCATCTCCTCCACATGCAAGCTACGAAGTTTCCTTCAAGCATCAGATGCTCCAAGATCAGCAGCATTCTCAACATGTTTTGCTCCGGAAGTCCTCTCCAGATTCTCCACATCAACCTCCTTCAAGCCTGCTGCATCAAATAATTCTATGA

Coding sequence (CDS)

ATGTTCATTCGCAACTTGGGAGACAAGTCAGATCTTTTCTTTCTTGCATTGCACGAAGAAGCATCTCCTCCACATGCAAGCTACGAAGTTTCCTTCAAGCATCAGATGCTCCAAGATCAGCAGCATTCTCAACATGTTTTGCTCCGGAAGTCCTCTCCAGATTCTCCACATCAACCTCCTTCAAGCCTGCTGCATCAAATAATTCTATGA

Protein sequence

MFIRNLGDKSDLFFLALHEEASPPHASYEVSFKHQMLQDQQHSQHVLLRKSSPDSPHQPPSSLLHQIIL
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G006490.1Lsi04G006490.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G006490Watermelon (97103) v2lsiwmbB284
Lsi04G006490Watermelon (97103) v2lsiwmbB305
Lsi04G006490Wax gourdlsiwgoB367
Lsi04G006490Wax gourdlsiwgoB380
Lsi04G006490Bottle gourd (USVL1VR-Ls)lsilsiB149
Lsi04G006490Cucumber (Gy14) v1cgylsiB076
Lsi04G006490Cucumber (Gy14) v1cgylsiB636
Lsi04G006490Cucurbita maxima (Rimu)cmalsiB172
Lsi04G006490Cucurbita maxima (Rimu)cmalsiB383
Lsi04G006490Cucurbita maxima (Rimu)cmalsiB670
Lsi04G006490Cucurbita maxima (Rimu)cmalsiB726
Lsi04G006490Cucurbita moschata (Rifu)cmolsiB160
Lsi04G006490Cucurbita moschata (Rifu)cmolsiB368
Lsi04G006490Cucurbita moschata (Rifu)cmolsiB661
Lsi04G006490Cucurbita moschata (Rifu)cmolsiB716
Lsi04G006490Cucurbita pepo (Zucchini)cpelsiB030
Lsi04G006490Cucurbita pepo (Zucchini)cpelsiB091
Lsi04G006490Cucurbita pepo (Zucchini)cpelsiB353
Lsi04G006490Cucurbita pepo (Zucchini)cpelsiB672
Lsi04G006490Wild cucumber (PI 183967)cpilsiB116
Lsi04G006490Wild cucumber (PI 183967)cpilsiB372
Lsi04G006490Cucumber (Chinese Long) v2culsiB119
Lsi04G006490Cucumber (Chinese Long) v2culsiB368
Lsi04G006490Melon (DHL92) v3.5.1lsimeB281
Lsi04G006490Melon (DHL92) v3.5.1lsimeB303
Lsi04G006490Watermelon (Charleston Gray)lsiwcgB283
Lsi04G006490Watermelon (Charleston Gray)lsiwcgB308
Lsi04G006490Watermelon (97103) v1lsiwmB296
Lsi04G006490Watermelon (97103) v1lsiwmB312
Lsi04G006490Cucumber (Gy14) v2cgyblsiB105
Lsi04G006490Cucumber (Gy14) v2cgyblsiB337
Lsi04G006490Melon (DHL92) v3.6.1lsimedB297
Lsi04G006490Melon (DHL92) v3.6.1lsimedB317
Lsi04G006490Silver-seed gourdcarlsiB218
Lsi04G006490Silver-seed gourdcarlsiB453
Lsi04G006490Silver-seed gourdcarlsiB567
Lsi04G006490Silver-seed gourdcarlsiB629
Lsi04G006490Cucumber (Chinese Long) v3cuclsiB131
Lsi04G006490Cucumber (Chinese Long) v3cuclsiB393