Lsi04G006370 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G006370
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionS-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Locationchr04 : 5842860 .. 5843636 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGGTATTCAAACAAAACCTCTTGTTATATCCAAATACTTTGTATTATCTCTCTTTTTCTCTCTTCCTTTCCTCCTCCTCCTCTCTCTCCGCCCTTACTACCACCGATTCTCCACGGCGGCCACCAACATTCCGCCGTCCGACAAATCCAACTCCGAATCTACCGGTTTAAGGATCCGACCCGGTTACACTTCCTACGAACGCTACATCAAGAAGCAACTCAACAAAACCCTAGACCCGAAGCTCCGAAAGATATGGACTACCAGAGATTGGGATCGGAAAATCCAAGTATTCTCCAGATTCTTCGACGGTTTGAAAGGGGAAGGGCTTCTTTCGAAGGAATCGAAAGCCCTATGCATCGGCGCTCGGGTCGGGCAAGAAGTGGAGGCGTTGAGGAAGATCGGAGTTTCCGATTCGATCGGAATGGACCTGGTTCCTTACCCGCCGCTTGTGGTTGAAGGCGATTTTCATAATCAGCCGTTTGGGAACAACAGTTTCGATTTCGAATTCTCCAATGTCTTCGATCACGCGCTCTACCCGGAGCGATTCGTGGCGGAGATCGAACGGACGTTGAAGCCCGGCGGGATTTGCGTCTTACACGTGGCGTTATCGCGACAGACAGATAAGTACTCCGCCAATGATCTTTACAGTGTAAAGCCGTTGGAGGCTCTGTTTCGGACATCGACGGTGGTCCGCGTTGGGAAGATCGACGGCTTTGGATTGGACACGGAGATTGTCTTCCGGAAAACGACGAACACGATCCAACGGTCTTGA

mRNA sequence

ATGAAAGGTATTCAAACAAAACCTCTTGTTATATCCAAATACTTTGTATTATCTCTCTTTTTCTCTCTTCCTTTCCTCCTCCTCCTCTCTCTCCGCCCTTACTACCACCGATTCTCCACGGCGGCCACCAACATTCCGCCGTCCGACAAATCCAACTCCGAATCTACCGGTTTAAGGATCCGACCCGGTTACACTTCCTACGAACGCTACATCAAGAAGCAACTCAACAAAACCCTAGACCCGAAGCTCCGAAAGATATGGACTACCAGAGATTGGGATCGGAAAATCCAAGTATTCTCCAGATTCTTCGACGGTTTGAAAGGGGAAGGGCTTCTTTCGAAGGAATCGAAAGCCCTATGCATCGGCGCTCGGGTCGGGCAAGAAGTGGAGGCGTTGAGGAAGATCGGAGTTTCCGATTCGATCGGAATGGACCTGGTTCCTTACCCGCCGCTTGTGGTTGAAGGCGATTTTCATAATCAGCCGTTTGGGAACAACAGTTTCGATTTCGAATTCTCCAATGTCTTCGATCACGCGCTCTACCCGGAGCGATTCGTGGCGGAGATCGAACGGACGTTGAAGCCCGGCGGGATTTGCGTCTTACACGTGGCGTTATCGCGACAGACAGATAAGTACTCCGCCAATGATCTTTACAGTGTAAAGCCGTTGGAGGCTCTGTTTCGGACATCGACGGTGGTCCGCGTTGGGAAGATCGACGGCTTTGGATTGGACACGGAGATTGTCTTCCGGAAAACGACGAACACGATCCAACGGTCTTGA

Coding sequence (CDS)

ATGAAAGGTATTCAAACAAAACCTCTTGTTATATCCAAATACTTTGTATTATCTCTCTTTTTCTCTCTTCCTTTCCTCCTCCTCCTCTCTCTCCGCCCTTACTACCACCGATTCTCCACGGCGGCCACCAACATTCCGCCGTCCGACAAATCCAACTCCGAATCTACCGGTTTAAGGATCCGACCCGGTTACACTTCCTACGAACGCTACATCAAGAAGCAACTCAACAAAACCCTAGACCCGAAGCTCCGAAAGATATGGACTACCAGAGATTGGGATCGGAAAATCCAAGTATTCTCCAGATTCTTCGACGGTTTGAAAGGGGAAGGGCTTCTTTCGAAGGAATCGAAAGCCCTATGCATCGGCGCTCGGGTCGGGCAAGAAGTGGAGGCGTTGAGGAAGATCGGAGTTTCCGATTCGATCGGAATGGACCTGGTTCCTTACCCGCCGCTTGTGGTTGAAGGCGATTTTCATAATCAGCCGTTTGGGAACAACAGTTTCGATTTCGAATTCTCCAATGTCTTCGATCACGCGCTCTACCCGGAGCGATTCGTGGCGGAGATCGAACGGACGTTGAAGCCCGGCGGGATTTGCGTCTTACACGTGGCGTTATCGCGACAGACAGATAAGTACTCCGCCAATGATCTTTACAGTGTAAAGCCGTTGGAGGCTCTGTTTCGGACATCGACGGTGGTCCGCGTTGGGAAGATCGACGGCTTTGGATTGGACACGGAGATTGTCTTCCGGAAAACGACGAACACGATCCAACGGTCTTGA

Protein sequence

MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRIRPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGFGLDTEIVFRKTTNTIQRS
Homology
[Close]
BLAST of Lsi04G006370 vs. TrEMBL
Match: A0A0A0KVD5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G592800 PE=4 SV=1)

HSP 1 Score: 460.3 bits (1183), Expect = 1.5e-126
Identity = 231/258 (89.53%), Postives = 239/258 (92.64%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRI 60
           MK  Q+KPL+ISKYFVLSLFFSLPFLLLLSLRPYYHRFS+  T+IP  D        L+I
Sbjct: 1   MKPNQSKPLIISKYFVLSLFFSLPFLLLLSLRPYYHRFSSPPTDIPTPD--------LKI 60

Query: 61  RPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALC 120
           RPGYTSYE YIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLK EGL+S ESKALC
Sbjct: 61  RPGYTSYEHYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKREGLISTESKALC 120

Query: 121 IGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180
           IGARVGQEVEAL+KIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY
Sbjct: 121 IGARVGQEVEALKKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180

Query: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 240
           PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFR+STVVRVGKIDGF
Sbjct: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRSSTVVRVGKIDGF 240

Query: 241 GLDTEIVFRKTTNTIQRS 259
           GLDTEIVFRKT N IQRS
Sbjct: 241 GLDTEIVFRKTANIIQRS 250

[Close]
BLAST of Lsi04G006370 vs. TrEMBL
Match: A0A067GR50_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025148mg PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 2.9e-93
Identity = 178/263 (67.68%), Postives = 212/263 (80.61%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSN---SESTG 60
           MK  Q+K  +  KYF++S+F +LP LLLL L      FS  A   PP    N   +ES  
Sbjct: 1   MKATQSKSPIF-KYFLISIFLTLPLLLLLLL------FSLKAAVHPPPLPQNVALAESED 60

Query: 61  LRIRPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESK 120
           LRIRPGY+SY+ YI++QLNKTL+PKLR  WTTRDWDRKIQVF++FFD LK + LLS ESK
Sbjct: 61  LRIRPGYSSYDAYIQRQLNKTLNPKLRTTWTTRDWDRKIQVFAKFFDDLKRKKLLSNESK 120

Query: 121 ALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDH 180
           ALCIGARVGQEVEAL+++GVSDS+G+DLVPYPPLV+EGDFH QPF + +FDFEFSNVFDH
Sbjct: 121 ALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSNVFDH 180

Query: 181 ALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKI 240
           ALYP++FV EIERTLKPGG+CVLHVALS++ DKYSANDL+SVKPL  LF+ S +VRV K+
Sbjct: 181 ALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVRVRKV 240

Query: 241 DGFGLDTEIVFR---KTTNTIQR 258
           DGFGLDTE+VFR   K+ N IQR
Sbjct: 241 DGFGLDTEVVFRKNAKSLNAIQR 256

[Close]
BLAST of Lsi04G006370 vs. TrEMBL
Match: V4TDN0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033974mg PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.6e-93
Identity = 175/253 (69.17%), Postives = 207/253 (81.82%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSN---SESTG 60
           MK  Q+K  +  KYF++S+F +LP LLLL L      FS  A   PP    N   SES  
Sbjct: 1   MKATQSKSPIF-KYFLISIFLTLPLLLLLLL------FSLKAAVHPPPLPQNVALSESED 60

Query: 61  LRIRPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESK 120
           LRIRPGY+SY+ YI++QLNKTL+PKLR  WTTRDWDRKIQVF++FFD LK + LLS ESK
Sbjct: 61  LRIRPGYSSYDAYIQRQLNKTLNPKLRTTWTTRDWDRKIQVFAKFFDDLKRKKLLSNESK 120

Query: 121 ALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDH 180
           ALCIGARVGQEVEAL+++GVSDS+G+DLVPYPPLV+EGDFH QPF + +FDFEFSNVFDH
Sbjct: 121 ALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSNVFDH 180

Query: 181 ALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKI 240
           ALYP++FV EIERTLKPGG+CVLHVALS++ DKYSANDL+SVKPL  LF+ S +VRV K+
Sbjct: 181 ALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVRVRKV 240

Query: 241 DGFGLDTEIVFRK 251
           DGFGLDTE+VFRK
Sbjct: 241 DGFGLDTEVVFRK 246

[Close]
BLAST of Lsi04G006370 vs. TrEMBL
Match: F6GVK0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00200 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 3.6e-91
Identity = 170/246 (69.11%), Postives = 201/246 (81.71%), Query Frame = 1 

Query: 5   QTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRIRPGY 64
           +TKPL + KYF  SLF S+P LLL S +    +     T+ PP    N  S  LRIRPGY
Sbjct: 4   KTKPLFL-KYFFFSLFVSIPILLLFSFQSLRRK----TTDPPPG---NQPSGDLRIRPGY 63

Query: 65  TSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGAR 124
           TSYE Y++ QLNKTL+PKLRKIWTTRDWDRKI VF++FF  LK + LL  ESKALCIGAR
Sbjct: 64  TSYEAYLQLQLNKTLNPKLRKIWTTRDWDRKINVFAQFFQDLKQKQLLKNESKALCIGAR 123

Query: 125 VGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALYPERF 184
           VGQEVEALR++GV+DS+G+DLVPYPPLV++GDFHNQPF N++FDFEFSNVFDHALYP++F
Sbjct: 124 VGQEVEALRRVGVADSVGIDLVPYPPLVLKGDFHNQPFKNDTFDFEFSNVFDHALYPDKF 183

Query: 185 VAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGFGLDT 244
           V EIERTL+PGG+CVLHVALSR++DKYSANDLYSV+PL  +F  S VV V  +DGFGLDT
Sbjct: 184 VGEIERTLRPGGVCVLHVALSRRSDKYSANDLYSVRPLTEMFGRSEVVHVRTVDGFGLDT 241

Query: 245 EIVFRK 251
           E+VFRK
Sbjct: 244 EVVFRK 241

[Close]
BLAST of Lsi04G006370 vs. TrEMBL
Match: A0A0S3QYS1_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G094000 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.7e-91
Identity = 169/253 (66.80%), Postives = 203/253 (80.24%), Query Frame = 1 

Query: 6   TKPLVISKYFVLSLFFSLPFLLLLSLRPY-----YHRFSTAATNIPPSDKSNSESTGLRI 65
           TKP ++ +YF+LSL  SLPF L L L  +     YHR++T   N             LRI
Sbjct: 10  TKPFIL-RYFLLSLILSLPFFLFLFLHLFSPPQQYHRYATTPYN-----------NNLRI 69

Query: 66  RPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALC 125
           RPGY+SY+ YI++QLNKTL+P+LRKIWTTRDW+RKI VF+RFF+ LKG+ LL   SKALC
Sbjct: 70  RPGYSSYDAYIQRQLNKTLNPRLRKIWTTRDWNRKIPVFARFFEDLKGKKLLHTSSKALC 129

Query: 126 IGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 185
           +GARVGQEVEALR++GVSDS+GMDLVPYPPLVV GDFH+QPF N++FDFEFSNVFDHALY
Sbjct: 130 VGARVGQEVEALRRVGVSDSVGMDLVPYPPLVVHGDFHDQPFENSTFDFEFSNVFDHALY 189

Query: 186 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 245
           PERFVAEIERTLKP G+CVLHVAL+R+ DKYSANDLYSV+PL  LF+ S +V V  ++GF
Sbjct: 190 PERFVAEIERTLKPHGVCVLHVALARRADKYSANDLYSVEPLVGLFKRSVLVHVRGVNGF 249

Query: 246 GLDTEIVFRKTTN 254
           GLDTE+ FRK T+
Sbjct: 250 GLDTEVAFRKNTS 250

[Close]
BLAST of Lsi04G006370 vs. TAIR10
Match: AT1G24480.1 (AT1G24480.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 321.6 bits (823), Expect = 4.3e-88
Identity = 156/244 (63.93%), Postives = 193/244 (79.10%), Query Frame = 1 

Query: 7   KPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRIRPGYTS 66
           +P  I KY ++S+F +LP +L  S++                     E   +RIRPGYTS
Sbjct: 3   QPKPILKYVLVSIFLTLPLILFFSIQ-----------------LRKPEKELIRIRPGYTS 62

Query: 67  YERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGARVG 126
           Y+ YI++QLNKTL+P+LR IW TRDWDRKI+VFSRFF  LK +GLLSK+SK LC+GARVG
Sbjct: 63  YDYYIQRQLNKTLNPRLRTIWMTRDWDRKIKVFSRFFQDLKRQGLLSKDSKCLCLGARVG 122

Query: 127 QEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALYPERFVA 186
           QEVEAL+++GV+DS+GMDLVPYPPLVV+GDFH+QPF + +FDFEFSNVFDHALYP++FV 
Sbjct: 123 QEVEALKRVGVNDSVGMDLVPYPPLVVKGDFHHQPFDDETFDFEFSNVFDHALYPDKFVG 182

Query: 187 EIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGFGLDTEI 246
           EIERTL+PGG+CVLHVALS ++DKYSANDL+SV+ L  LFR S VV V  +DGFGLDTE+
Sbjct: 183 EIERTLRPGGLCVLHVALSTRSDKYSANDLFSVEALVKLFRQSEVVHVRNVDGFGLDTEV 229

Query: 247 VFRK 251
           VFRK
Sbjct: 243 VFRK 229

[Close]
BLAST of Lsi04G006370 vs. TAIR10
Match: AT4G24805.1 (AT4G24805.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 311.6 bits (797), Expect = 4.5e-85
Identity = 163/243 (67.08%), Postives = 185/243 (76.13%), Query Frame = 1 

Query: 15  FVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSEST---GLRIRP-GYTSYERY 74
           F LSLF SL FL++     +   F T     P S  S+  S    G+RIR  GY+SYE Y
Sbjct: 10  FTLSLFLSLSFLII-----FLFAFPTTFLRRPLSSSSSVTSVADEGIRIRHHGYSSYEAY 69

Query: 75  IKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGARVGQEVE 134
           IK QLNKT +PKLRK+WTTRDWDRK++VFS FF  L   GLLS +SKAL IGARVGQEV 
Sbjct: 70  IKHQLNKTQNPKLRKVWTTRDWDRKVRVFSTFFRRLSDRGLLSNQSKALSIGARVGQEVA 129

Query: 135 ALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALYPERFVAEIER 194
           ALR IGV DS+G+DLVP PPLVV+GDFH QPF   +FDFEFSNVFDHALYPE+FV EIER
Sbjct: 130 ALRLIGVEDSVGIDLVPRPPLVVKGDFHAQPFDEETFDFEFSNVFDHALYPEKFVGEIER 189

Query: 195 TLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGFGLDTEIVFRK 254
           TLKPGG+CVLHV++S +TDKYSANDL SVKPL  LF+ S VV + KIDGFGLDTEIVFRK
Sbjct: 190 TLKPGGVCVLHVSISGKTDKYSANDLLSVKPLVKLFKRSKVVEMRKIDGFGLDTEIVFRK 247

[Close]
BLAST of Lsi04G006370 vs. TAIR10
Match: AT5G01710.1 (AT5G01710.1 methyltransferases)

HSP 1 Score: 119.8 bits (299), Expect = 2.5e-27
Identity = 66/157 (42.04%), Postives = 89/157 (56.69%), Query Frame = 1 

Query: 86  IWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGARVGQEVEALRKIGVSDSIGMDL 145
           ++TTRDW + +Q +S  F  L  +G LS ESK LC+   +GQEV +LR+IGV +S+G+  
Sbjct: 81  LYTTRDWIKSVQFYSSIFQDLIADGYLSPESKTLCVETAIGQEVHSLREIGVKNSVGISK 140

Query: 146 VPYPPLVVEGDFHNQPFGNNSFDFEFS--NVFDHALYPERFVAEIERTLKPGGICVLHVA 205
               PLVV G+ H  PF +N+FDF FS  +    +L    F  EI RTLKP G  V+HV 
Sbjct: 141 KASRPLVVRGEGHAIPFEDNAFDFVFSGGDRLGKSLKQLEFADEITRTLKPEGFAVVHV- 200

Query: 206 LSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 241
                    A D YS      LF +  +V++  IDGF
Sbjct: 201 --------GATDTYSFNSFLDLFNSCRLVKMRDIDGF 228

[Close]
BLAST of Lsi04G006370 vs. TAIR10
Match: AT2G16030.1 (AT2G16030.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 104.4 bits (259), Expect = 1.1e-22
Identity = 62/172 (36.05%), Postives = 92/172 (53.49%), Query Frame = 1 

Query: 79  LDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALCIGARVGQEVEALRKIGVS 138
           L  K  +IW++  W  ++  FS +F   +  G +   +KALC+ A  G  + AL +IG+S
Sbjct: 63  LPKKNARIWSSGAWKSRLYSFSTYFLRFRDLGFIQNHTKALCLSAGAGHALMALSQIGLS 122

Query: 139 DSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALYPERFVAEIERTLKPGGIC 198
           D   ++LV   PLV   D HN PF +  FDF F+     AL+P +FV E+ERT++ GG C
Sbjct: 123 DVTAVELVDSIPLVKRADPHNLPFFDGVFDFAFTAHLAEALFPWQFVEEMERTVRRGGFC 182

Query: 199 VLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGFG-LDTEIVFR 250
           V+ V      D+   +D   V+ +  LF  S VV V  +   G   T I+F+
Sbjct: 183 VVSV------DECGGDD---VRDIARLFHNSKVVDVANVTLEGSKKTSILFK 225

[Close]
BLAST of Lsi04G006370 vs. TAIR10
Match: AT4G26730.1 (AT4G26730.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 100.5 bits (249), Expect = 1.6e-21
Identity = 62/185 (33.51%), Postives = 91/185 (49.19%), Query Frame = 1 

Query: 68  ERYIKKQLNKT---------------LDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLL 127
           ER ++K LN+                L  K  +IW +  W  ++  FS +F   +  G +
Sbjct: 2   ERNVEKMLNRVSVVFLSIGTVLMHLPLPKKNARIWFSGAWKSRLSSFSTYFLRFRDLGFI 61

Query: 128 SKESKALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFS 187
              +KALC+    G    AL +IG+SD   ++LV   PLV   D HN PF +  FDF F+
Sbjct: 62  QNHTKALCLSDGAGHAPMALSQIGLSDVTAVELVDSIPLVKRADPHNLPFFDRVFDFVFT 121

Query: 188 NVFDHALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVV 238
                AL+P RFV E+ERT++ GG CV+ V      D+ S +D   V+ +   F  S +V
Sbjct: 122 AHLAEALFPWRFVEEMERTVRRGGFCVVAV------DECSGDD---VRDIARFFHNSKIV 177

[Close]
BLAST of Lsi04G006370 vs. NCBI nr
Match: gi|449435017|ref|XP_004135292.1| (PREDICTED: uncharacterized protein LOC101206192 [Cucumis sativus])

HSP 1 Score: 460.3 bits (1183), Expect = 2.2e-126
Identity = 231/258 (89.53%), Postives = 239/258 (92.64%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRI 60
           MK  Q+KPL+ISKYFVLSLFFSLPFLLLLSLRPYYHRFS+  T+IP  D        L+I
Sbjct: 1   MKPNQSKPLIISKYFVLSLFFSLPFLLLLSLRPYYHRFSSPPTDIPTPD--------LKI 60

Query: 61  RPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALC 120
           RPGYTSYE YIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLK EGL+S ESKALC
Sbjct: 61  RPGYTSYEHYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKREGLISTESKALC 120

Query: 121 IGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180
           IGARVGQEVEAL+KIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY
Sbjct: 121 IGARVGQEVEALKKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180

Query: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 240
           PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFR+STVVRVGKIDGF
Sbjct: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRSSTVVRVGKIDGF 240

Query: 241 GLDTEIVFRKTTNTIQRS 259
           GLDTEIVFRKT N IQRS
Sbjct: 241 GLDTEIVFRKTANIIQRS 250

[Close]
BLAST of Lsi04G006370 vs. NCBI nr
Match: gi|659090623|ref|XP_008446113.1| (PREDICTED: uncharacterized protein LOC103488937 [Cucumis melo])

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 221/258 (85.66%), Postives = 228/258 (88.37%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRI 60
           MK  Q+KPL+ISKYFVLSLFFSLPFLLLLSLR            +P  D        L+I
Sbjct: 1   MKPSQSKPLIISKYFVLSLFFSLPFLLLLSLR------------LPTPD--------LKI 60

Query: 61  RPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALC 120
           RPGYTSYE YIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLK EGL+S ESKALC
Sbjct: 61  RPGYTSYEHYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKREGLISTESKALC 120

Query: 121 IGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180
           IGARVGQEVEAL+KIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY
Sbjct: 121 IGARVGQEVEALKKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180

Query: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 240
           PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFR S VVR+GKIDGF
Sbjct: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRRSMVVRIGKIDGF 238

Query: 241 GLDTEIVFRKTTNTIQRS 259
           GLDTEIVFRKT NTIQRS
Sbjct: 241 GLDTEIVFRKTANTIQRS 238

[Close]
BLAST of Lsi04G006370 vs. NCBI nr
Match: gi|1009153203|ref|XP_015894511.1| (PREDICTED: uncharacterized protein LOC107428488 [Ziziphus jujuba])

HSP 1 Score: 360.5 bits (924), Expect = 2.4e-96
Identity = 180/254 (70.87%), Postives = 211/254 (83.07%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSNSESTGLRI 60
           MK  QTK   I K+F+LSLF S+PFLL+L    +  R +T  T    S K+ SE  GLRI
Sbjct: 1   MKLSQTKRTTIIKFFLLSLFLSIPFLLILLSFNFQLRRTTTTT----STKTTSEKQGLRI 60

Query: 61  RPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESKALC 120
           RPGY+SY+ YI++QLNKTL+PKLR+IWTTRDWDRKI+VF+RFF  +K + LL  ES++LC
Sbjct: 61  RPGYSSYDAYIQRQLNKTLNPKLRQIWTTRDWDRKIRVFARFFQEMKEKKLLWNESRSLC 120

Query: 121 IGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDHALY 180
           IGARVGQEVEALR+IGV DS+GMDLVPYPPLVV GDFH+QPFG+ +FDFEFSNVFDHALY
Sbjct: 121 IGARVGQEVEALRRIGVKDSVGMDLVPYPPLVVGGDFHHQPFGDGTFDFEFSNVFDHALY 180

Query: 181 PERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKIDGF 240
           PE+FVAEIERTLKPGG+CVLHVALSR++DKYSANDLYSVKPL  +FR S VV V K+DGF
Sbjct: 181 PEKFVAEIERTLKPGGVCVLHVALSRRSDKYSANDLYSVKPLVEMFRKSEVVHVRKVDGF 240

Query: 241 GLDTEIVFRKTTNT 255
           GLDTE+VFRK   T
Sbjct: 241 GLDTEVVFRKKNLT 250

[Close]
BLAST of Lsi04G006370 vs. NCBI nr
Match: gi|568861018|ref|XP_006484005.1| (PREDICTED: uncharacterized protein LOC102631267 [Citrus sinensis])

HSP 1 Score: 349.7 bits (896), Expect = 4.2e-93
Identity = 178/263 (67.68%), Postives = 212/263 (80.61%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSN---SESTG 60
           MK  Q+K  +  KYF++S+F +LP LLLL L      FS  A   PP    N   +ES  
Sbjct: 1   MKATQSKSPIF-KYFLISIFLTLPLLLLLLL------FSLKAAVHPPPLPQNVALAESED 60

Query: 61  LRIRPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESK 120
           LRIRPGY+SY+ YI++QLNKTL+PKLR  WTTRDWDRKIQVF++FFD LK + LLS ESK
Sbjct: 61  LRIRPGYSSYDAYIQRQLNKTLNPKLRTTWTTRDWDRKIQVFAKFFDDLKRKKLLSNESK 120

Query: 121 ALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDH 180
           ALCIGARVGQEVEAL+++GVSDS+G+DLVPYPPLV+EGDFH QPF + +FDFEFSNVFDH
Sbjct: 121 ALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSNVFDH 180

Query: 181 ALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKI 240
           ALYP++FV EIERTLKPGG+CVLHVALS++ DKYSANDL+SVKPL  LF+ S +VRV K+
Sbjct: 181 ALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVRVRKV 240

Query: 241 DGFGLDTEIVFR---KTTNTIQR 258
           DGFGLDTE+VFR   K+ N IQR
Sbjct: 241 DGFGLDTEVVFRKNAKSLNAIQR 256

[Close]
BLAST of Lsi04G006370 vs. NCBI nr
Match: gi|567891293|ref|XP_006438167.1| (hypothetical protein CICLE_v10033974mg [Citrus clementina])

HSP 1 Score: 348.6 bits (893), Expect = 9.4e-93
Identity = 175/253 (69.17%), Postives = 207/253 (81.82%), Query Frame = 1 

Query: 1   MKGIQTKPLVISKYFVLSLFFSLPFLLLLSLRPYYHRFSTAATNIPPSDKSN---SESTG 60
           MK  Q+K  +  KYF++S+F +LP LLLL L      FS  A   PP    N   SES  
Sbjct: 1   MKATQSKSPIF-KYFLISIFLTLPLLLLLLL------FSLKAAVHPPPLPQNVALSESED 60

Query: 61  LRIRPGYTSYERYIKKQLNKTLDPKLRKIWTTRDWDRKIQVFSRFFDGLKGEGLLSKESK 120
           LRIRPGY+SY+ YI++QLNKTL+PKLR  WTTRDWDRKIQVF++FFD LK + LLS ESK
Sbjct: 61  LRIRPGYSSYDAYIQRQLNKTLNPKLRTTWTTRDWDRKIQVFAKFFDDLKRKKLLSNESK 120

Query: 121 ALCIGARVGQEVEALRKIGVSDSIGMDLVPYPPLVVEGDFHNQPFGNNSFDFEFSNVFDH 180
           ALCIGARVGQEVEAL+++GVSDS+G+DLVPYPPLV+EGDFH QPF + +FDFEFSNVFDH
Sbjct: 121 ALCIGARVGQEVEALKRVGVSDSVGIDLVPYPPLVIEGDFHRQPFDDETFDFEFSNVFDH 180

Query: 181 ALYPERFVAEIERTLKPGGICVLHVALSRQTDKYSANDLYSVKPLEALFRTSTVVRVGKI 240
           ALYP++FV EIERTLKPGG+CVLHVALS++ DKYSANDL+SVKPL  LF+ S +VRV K+
Sbjct: 181 ALYPDKFVMEIERTLKPGGVCVLHVALSKRADKYSANDLFSVKPLVKLFKRSEMVRVRKV 240

Query: 241 DGFGLDTEIVFRK 251
           DGFGLDTE+VFRK
Sbjct: 241 DGFGLDTEVVFRK 246

The following BLAST results are available for this feature:
BLAST of Lsi04G006370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi04G006370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KVD5_CUCSA1.5e-12689.53Uncharacterized protein OS=Cucumis sativus GN=Csa_5G592800 PE=4 SV=1[more]
A0A067GR50_CITSI2.9e-9367.68Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g025148mg PE=4 SV=1[more]
V4TDN0_9ROSI6.6e-9369.17Uncharacterized protein OS=Citrus clementina GN=CICLE_v10033974mg PE=4 SV=1[more]
F6GVK0_VITVI3.6e-9169.11Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0137g00200 PE=4 SV=... [more]
A0A0S3QYS1_PHAAN4.7e-9166.80Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G094000 PE=... [more]
BLAST of Lsi04G006370 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G24480.14.3e-8863.93 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT4G24805.14.5e-8567.08 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT5G01710.12.5e-2742.04 methyltransferases[more]
AT2G16030.11.1e-2236.05 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
AT4G26730.11.6e-2133.51 S-adenosyl-L-methionine-dependent methyltransferases superfamily pro... [more]
BLAST of Lsi04G006370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449435017|ref|XP_004135292.1|2.2e-12689.53PREDICTED: uncharacterized protein LOC101206192 [Cucumis sativus][more]
gi|659090623|ref|XP_008446113.1|1.4e-11785.66PREDICTED: uncharacterized protein LOC103488937 [Cucumis melo][more]
gi|1009153203|ref|XP_015894511.1|2.4e-9670.87PREDICTED: uncharacterized protein LOC107428488 [Ziziphus jujuba][more]
gi|568861018|ref|XP_006484005.1|4.2e-9367.68PREDICTED: uncharacterized protein LOC102631267 [Citrus sinensis][more]
gi|567891293|ref|XP_006438167.1|9.4e-9369.17hypothetical protein CICLE_v10033974mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008168methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR013216Methyltransf_11
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0032259 methylation
cellular_component GO:0005737 cytoplasm
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
molecular_function GO:0008168 methyltransferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G006370.1Lsi04G006370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013216Methyltransferase type 11PFAMPF08241Methyltransf_11coord: 121..200
score: 1.2
NoneNo IPR availablePANTHERPTHR10108METHYLTRANSFERASEcoord: 57..219
score: 1.1E
NoneNo IPR availablePANTHERPTHR10108:SF874F21J9.14coord: 57..219
score: 1.1E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G006370Csa5G592800Cucumber (Chinese Long) v2culsiB368
Lsi04G006370CSPI05G21820Wild cucumber (PI 183967)cpilsiB372
Lsi04G006370CmaCh04G017980Cucurbita maxima (Rimu)cmalsiB670
Lsi04G006370CmoCh04G018990Cucurbita moschata (Rifu)cmolsiB661
Lsi04G006370CmoCh18G007150Cucurbita moschata (Rifu)cmolsiB368
Lsi04G006370Cla010004Watermelon (97103) v1lsiwmB312
Lsi04G006370MELO3C011910Melon (DHL92) v3.5.1lsimeB281
Lsi04G006370ClCG05G026160Watermelon (Charleston Gray)lsiwcgB283
Lsi04G006370MELO3C011910.2Melon (DHL92) v3.6.1lsimedB297
Lsi04G006370Bhi07G001486Wax gourdlsiwgoB380
Lsi04G006370Cp4.1LG01g15800Cucurbita pepo (Zucchini)cpelsiB353
Lsi04G006370Cp4.1LG09g06260Cucurbita pepo (Zucchini)cpelsiB030
Lsi04G006370CsGy5G021320Cucumber (Gy14) v2cgyblsiB337
Lsi04G006370Carg14294Silver-seed gourdcarlsiB218
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G006370Bottle gourd (USVL1VR-Ls)lsilsiB149
Lsi04G006370Cucumber (Gy14) v1cgylsiB076
Lsi04G006370Cucumber (Gy14) v1cgylsiB636
Lsi04G006370Cucurbita maxima (Rimu)cmalsiB172
Lsi04G006370Cucurbita maxima (Rimu)cmalsiB383
Lsi04G006370Cucurbita maxima (Rimu)cmalsiB726
Lsi04G006370Cucurbita moschata (Rifu)cmolsiB160
Lsi04G006370Cucurbita moschata (Rifu)cmolsiB716
Lsi04G006370Cucurbita pepo (Zucchini)cpelsiB091
Lsi04G006370Cucurbita pepo (Zucchini)cpelsiB672
Lsi04G006370Wild cucumber (PI 183967)cpilsiB116
Lsi04G006370Cucumber (Chinese Long) v2culsiB119
Lsi04G006370Melon (DHL92) v3.5.1lsimeB289
Lsi04G006370Melon (DHL92) v3.5.1lsimeB303
Lsi04G006370Watermelon (Charleston Gray)lsiwcgB308
Lsi04G006370Watermelon (97103) v1lsiwmB296
Lsi04G006370Cucumber (Gy14) v2cgyblsiB105
Lsi04G006370Melon (DHL92) v3.6.1lsimedB317
Lsi04G006370Silver-seed gourdcarlsiB453
Lsi04G006370Silver-seed gourdcarlsiB567
Lsi04G006370Cucumber (Chinese Long) v3cuclsiB131
Lsi04G006370Cucumber (Chinese Long) v3cuclsiB393
Lsi04G006370Watermelon (97103) v2lsiwmbB284
Lsi04G006370Watermelon (97103) v2lsiwmbB305
Lsi04G006370Wax gourdlsiwgoB367