Lsi04G006350 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G006350
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRegulator of chromosome condensation (RCC1) family protein
Locationchr04 : 5827505 .. 5831261 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTGATTTTCAGTAATTGTTAATCATTTTTGGTTAGTGTCTCTGACTTTTGCTCCTTATAATGAGTTTGCGTGAATAGATGTTTATCCTTCTCTTATGGTAATTCTTTCCTTTTTGGGTTTCTTTTGGTGTTGGAATATCCATTCATGGAAGATTGGTATTCTTTGCCTTCTGCTCTGACCCAATTTTTCATCATCATCTTCCTTCTTCTTCTTTTGATTTCCATTTCCTTCATCGTTTTTGTTTCAGAGTTTCCTGCCATCCTTTCTGCTGCTACTCTTTTACTTTGTTTTTGCTTTTCTTAAGCTCAAGTTGTAGTGATCCAGTGGCTTCTTTGGGCTTTGTTTTTACACGTTGGGTTGTTTGTGGTTAGCTGATCTAATCTTTAATCTCTTTCACGTCGTTGGCTCTTAAAACAAAAAAGCTTTACACTTCAAAGCATCCATAAATCCATTGGCCTTTTTTGCCTTTTCGTTTGTTTTCTCCTTTGTCTTATGAGGAATTTATACAGGGGTGCTTTGTTTCTTGTGTAGATTCAAGAGTGGAAGTTTGTTGAACAATCCGGTTTATCTAGGTAGATAATGATATCTCCCATCTTTTAGATTTACAATGGATCACCTGGAAAGAATAATGTAGTGATTTCTTTGTTCATGTTCTTGCAATCTCAGCGATCTAGACTCATCTTCTACTAAGTTTGGGCACTGCAAAGCCTCTGGCAGTGCCCATGGATGCCACGACAAGCGAAACGGCGGCTATACAGTTCCATAGCATTCCTGATCAATCAGTTTCTGCTATTGTCACCAATGCAACATCGACATTTCCACAATCGAAACGACATTGTCTTGGGGAATCCGACCCGGGTGAATTCCCCTTAGCTGCCAATCCCTCCATTGTTCTTCATGTCCTGACGGCATGTAACTTGGATCCTCAAGACCTTGCAAAGTTAGAGGCAAGATCTTTCGTTTCCTTTGTTATGCTTTTCCAGCATTGTTGTTAACTCTAGGATTGATAATGCTGCTGATTGATTTTGGTTGTGTGTGTTGCAGGCAACATGTTCATTCTTTAGACAGCCTGCAAACTTTGCTCCTGACTATGAATTGTCGATATCGGAGCTTGCTGCATTAGATATGTGCCAAAAGAGGGCCATATTCAAACCTATGACAGCAGAACAGCATCAAGCATTGAAGCAAAGATGTGGTGGTTCCTGGAAACTGGTATTGAGGTTTTTAGTGGCTGGAGAAACATGTTGCAGAAGGGAAAAATCCATGGCAATAGCAGGACCTGGTCACAGCATCGCAGTCACGTCAAAAGGAGCTGTTTACTCCTTTGGATCCAACAGCTCTGGACAGCTTGGACATGGTACCACTGAAGAGGAATCACGGCCTCGCCTTATCAGGTTGCAAAAATTTCAACGATTCTTTCACCTGATACCAAGAGAAGTAGTATAAAAATTAATGGACTCCGTGATGTTGCAGATCCCTGCAAGGAATTCGAATAATTCAGGCAGCAGCAGGGGGCGGGAGGACAATGTTAATCAGCGACGCTGGGCATGTTTATGCATTTGGCAAGGATTCATTTGGTGAAGCTGAGTATGGAGCTCAAGGAGCTCAAGTTATTACTACACCAAAGGTGGTCGAATCCCTGAAGGATATATTTGTGGTGCAAGCTGCAATTGGAAATTTCTTTACTGCTGTTTTATCAAGAGAAGGTAGGGTGTACACATTTTCTTGGGGGGCTGACAGTAGGCTCGGTCATCATACCGAACCGAATGACTTGGAACCACGACCCCTGATGGGGGCATTAGAAAACATTCCAGTTGTTCAAATTGCTGCTGGATATTGCTACCTTCTTGCTCTAGCTTGTCATCCTAGTGGCATGTGAGCTCCATCTTCATTTTCCTCAAGCAGCATTACTGTTTTTAACATTTCTTTGTCTTTACCTCTTAGCACAGATTGAATGAAATGGTATTTTAAATTTCATTTTGTTACCAACAGATGAATAACTGTTAATCCATTCACAATCTTATGTTTCCAAAACATCAGGTCAGTATACTCAGTTGGGTGTGGACTGGGCGGGAAGCTCGGTCATGGTTCAAGGACTGATGAGAAACAGCCACGACTTATTGAACAATTTCAGCTTCTGAATCTCCAGCCAGTCGTAGTCGCTGCTGGTGCTTGGCACGCAGCTGTTGTAGGTCGCGACGGTCGAGTTTGTACATGGGGTTGGGGCCGATATGGGTGCCTGGGTCATGGAAATGAGGAATGTGAATCTTCCCCTAAGGTGGTGGAAGCATTAAGCAATGTTAAAGCAGTTCATGTTGCTACAGGAGATTATACAACATTCGTAGTATCTGATGATGGCGACGTGTATTCTTTCGGTTGTGGAGAATCCGCTAGTCTCGGGCATAATATCGCCGTGCCCGAGGAACAGGTTTTGCTTTCTCCATGCTTATACTTTCTTCTTTACTTATACCAAATTCTTTCAATCAACTCAAAACGGTTTGCATCTCAAATGTTTCCTATGTCTTGCTTCTTTCATTTAGACACTTTTCGTGCATCATGTGCCTGATTATCACAACTAGCATTTCAGCTAGACAACTGTTGGTTCTTTCAACAGGATTTATATTTGCTTTTCTTAGCAGATCCACAGGTAGTCTTGTGTAATCAGCTACATGATCTGCTAAACTCTAACAAGTAATCGATTTTTTATGGATATTGTACAGGGGAATCGGCAACCGCACGTTTTAAGCCCAGAACTAGTCAGGTCTCTGAAGCAAATTAGCGAGCGGGTAGTTCAGATTAGCCTCACTAATTCAATTTACTGGAATGCACACACCTTTGCACTGACCGAGTCAGGGAAGTTGTATGCATTTGGTGCTGGAGACAAAGGGCAGCTTGGGGTCGAACTTCTGGCAAATCAAACCGAAAGGGGAAACCCAGAGCGGGTTGACATTGATCTAAATTAACCAAAAAGAAAGAAGTCAGTAACTTTCTCTCAGCAAACACAACTCCATTGATGTCCAAAGTATGCTAATGGTTATGGCATTGCATTTTAATCCCTTGATTTGGCGAATGAAATTATTAATTTGTAAATAGAAAAAAGAACCCAAAAAAAGGAAAAAAAGTGAAGAATGGTTTTATGGTTGTTGTTGATATTTGGAATGGGAAATGGATGGGGCAGCTTGTTCTTTTGTAGGTTTTAAGCCGTTTATAGACTATAGTCCACTTTAAGTCTTAACATTTTATGAAAGCTTCAGATGGAGTTTATGAAGGAGTTGGATTCCATGATATATGAAGATACTGACAAGCAACTCGAATCTGATTCGACAGAGGACTAAGGTCTCAAAAACAAGAGAAACAAAACGAAAATGAAAGGGAAATTCATGGAGAACTTTCAAGAAATCGCATGGCAACATCAGAACAGAACAAATAAAATGAAAACAATCTAAAATACAATTACCAATCAGAAAGTAAAATCGATTGAACCTGAACATTGCGAATGATTGTTGAAGAAAGGCTCCGCAGCGCCATGTGTATGGATCGGAATCCATTTAGTTCTGAGAAATCTTCTTTGTTTCAGATCTCAATGGTTCAATTCAATTGCACGGCTTTGCTTTTACGCGCCTCAACTTCACTTTCTTTTTTCAAAAAGACGAGAGGGAACTCGCAAATATTTGTGGGGGGAAAATCAATTTAATGAATATTTACAAATAATTCACTCAAAATCTTAAAAAAAAAATCATTCAAACTACG

mRNA sequence

ATGGAAACTCATCTTCTACTAAGTTTGGGCACTGCAAAGCCTCTGGCAGTGCCCATGGATGCCACGACAAGCGAAACGGCGGCTATACAGTTCCATAGCATTCCTGATCAATCAGTTTCTGCTATTGTCACCAATGCAACATCGACATTTCCACAATCGAAACGACATTGTCTTGGGGAATCCGACCCGGGTGAATTCCCCTTAGCTGCCAATCCCTCCATTGTTCTTCATGTCCTGACGGCATGTAACTTGGATCCTCAAGACCTTGCAAAGTTAGAGGCAAGATCTTTCGTTTCCTTTGCAACATGTTCATTCTTTAGACAGCCTGCAAACTTTGCTCCTGACTATGAATTGTCGATATCGGAGCTTGCTGCATTAGATATGTGCCAAAAGAGGGCCATATTCAAACCTATGACAGCAGAACAGCATCAAGCATTGAAGCAAAGATGTGGTGGTTCCTGGAAACTGGTATTGAGGTTTTTAGTGGCTGGAGAAACATGTTGCAGAAGGGAAAAATCCATGGCAATAGCAGGACCTGGTCACAGCATCGCAGTCACGTCAAAAGGAGCTGTTTACTCCTTTGGATCCAACAGCTCTGGACAGCTTGGACATGGTACCACTGAAGAGGAATCACGGCCTCGCCTTATCAGATCCCTGCAAGGAATTCGAATAATTCAGGCAGCAGCAGGGGGCGGGAGGACAATGTTAATCAGCGACGCTGGGCATGTTTATGCATTTGGCAAGGATTCATTTGGTGAAGCTGAGTATGGAGCTCAAGGAGCTCAAGTTATTACTACACCAAAGGTGGTCGAATCCCTGAAGGATATATTTGTGGTGCAAGCTGCAATTGGAAATTTCTTTACTGCTGTTTTATCAAGAGAAGGTAGGGTGTACACATTTTCTTGGGGGGCTGACAGTAGGCTCGGTCATCATACCGAACCGAATGACTTGGAACCACGACCCCTGATGGGGGCATTAGAAAACATTCCAGTTGTTCAAATTGCTGCTGGATATTGCTACCTTCTTGCTCTAGCTTGTCATCCTAGTGGCATGTCAGTATACTCAGTTGGGTGTGGACTGGGCGGGAAGCTCGGTCATGGTTCAAGGACTGATGAGAAACAGCCACGACTTATTGAACAATTTCAGCTTCTGAATCTCCAGCCAGTCGTAGTCGCTGCTGGTGCTTGGCACGCAGCTGTTGTAGGTCGCGACGGTCGAGTTTGTACATGGGGTTGGGGCCGATATGGGTGCCTGGGTCATGGAAATGAGGAATGTGAATCTTCCCCTAAGGTGGTGGAAGCATTAAGCAATGTTAAAGCAGTTCATGTTGCTACAGGAGATTATACAACATTCGTAGTATCTGATGATGGCGACGTGTATTCTTTCGGTTGTGGAGAATCCGCTAGTCTCGGGCATAATATCGCCGTGCCCGAGGAACAGGGGAATCGGCAACCGCACGTTTTAAGCCCAGAACTAGTCAGGTCTCTGAAGCAAATTAGCGAGCGGGTAGTTCAGATTAGCCTCACTAATTCAATTTACTGGAATGCACACACCTTTGCACTGACCGAGTCAGGGAAGTTGTATGCATTTGGTGCTGGAGACAAAGGGCAGCTTGGGGTCGAACTTCTGGCAAATCAAACCGAAAGGGGAAACCCAGAGCGGGTTGACATTGATCTAAATTAACCAAAAAGAAAGAAGTCAGTAACTTTCTCTCAGCAAACACAACTCCATTGATGTCCAAAGTATGCTAATGGTTATGGCATTGCATTTTAATCCCTTGATTTGGCGAATGAAATTATTAATTTGTAAATAGAAAAAAGAACCCAAAAAAAGGAAAAAAAGTGAAGAATGGTTTTATGGTTGTTGTTGATATTTGGAATGGGAAATGGATGGGGCAGCTTGTTCTTTTGTAGGTTTTAAGCCGTTTATAGACTATAGTCCACTTTAAGTCTTAACATTTTATGAAAGCTTCAGATGGAGTTTATGAAGGAGTTGGATTCCATGATATATGAAGATACTGACAAGCAACTCGAATCTGATTCGACAGAGGACTAAGGTCTCAAAAACAAGAGAAACAAAACGAAAATGAAAGGGAAATTCATGGAGAACTTTCAAGAAATCGCATGGCAACATCAGAACAGAACAAATAAAATGAAAACAATCTAAAATACAATTACCAATCAGAAAGTAAAATCGATTGAACCTGAACATTGCGAATGATTGTTGAAGAAAGGCTCCGCAGCGCCATGTGTATGGATCGGAATCCATTTAGTTCTGAGAAATCTTCTTTGTTTCAGATCTCAATGGTTCAATTCAATTGCACGGCTTTGCTTTTACGCGCCTCAACTTCACTTTCTTTTTTCAAAAAGACGAGAGGGAACTCGCAAATATTTGTGGGGGGAAAATCAATTTAATGAATATTTACAAATAATTCACTCAAAATCTTAAAAAAAAAATCATTCAAACTACG

Coding sequence (CDS)

ATGGAAACTCATCTTCTACTAAGTTTGGGCACTGCAAAGCCTCTGGCAGTGCCCATGGATGCCACGACAAGCGAAACGGCGGCTATACAGTTCCATAGCATTCCTGATCAATCAGTTTCTGCTATTGTCACCAATGCAACATCGACATTTCCACAATCGAAACGACATTGTCTTGGGGAATCCGACCCGGGTGAATTCCCCTTAGCTGCCAATCCCTCCATTGTTCTTCATGTCCTGACGGCATGTAACTTGGATCCTCAAGACCTTGCAAAGTTAGAGGCAAGATCTTTCGTTTCCTTTGCAACATGTTCATTCTTTAGACAGCCTGCAAACTTTGCTCCTGACTATGAATTGTCGATATCGGAGCTTGCTGCATTAGATATGTGCCAAAAGAGGGCCATATTCAAACCTATGACAGCAGAACAGCATCAAGCATTGAAGCAAAGATGTGGTGGTTCCTGGAAACTGGTATTGAGGTTTTTAGTGGCTGGAGAAACATGTTGCAGAAGGGAAAAATCCATGGCAATAGCAGGACCTGGTCACAGCATCGCAGTCACGTCAAAAGGAGCTGTTTACTCCTTTGGATCCAACAGCTCTGGACAGCTTGGACATGGTACCACTGAAGAGGAATCACGGCCTCGCCTTATCAGATCCCTGCAAGGAATTCGAATAATTCAGGCAGCAGCAGGGGGCGGGAGGACAATGTTAATCAGCGACGCTGGGCATGTTTATGCATTTGGCAAGGATTCATTTGGTGAAGCTGAGTATGGAGCTCAAGGAGCTCAAGTTATTACTACACCAAAGGTGGTCGAATCCCTGAAGGATATATTTGTGGTGCAAGCTGCAATTGGAAATTTCTTTACTGCTGTTTTATCAAGAGAAGGTAGGGTGTACACATTTTCTTGGGGGGCTGACAGTAGGCTCGGTCATCATACCGAACCGAATGACTTGGAACCACGACCCCTGATGGGGGCATTAGAAAACATTCCAGTTGTTCAAATTGCTGCTGGATATTGCTACCTTCTTGCTCTAGCTTGTCATCCTAGTGGCATGTCAGTATACTCAGTTGGGTGTGGACTGGGCGGGAAGCTCGGTCATGGTTCAAGGACTGATGAGAAACAGCCACGACTTATTGAACAATTTCAGCTTCTGAATCTCCAGCCAGTCGTAGTCGCTGCTGGTGCTTGGCACGCAGCTGTTGTAGGTCGCGACGGTCGAGTTTGTACATGGGGTTGGGGCCGATATGGGTGCCTGGGTCATGGAAATGAGGAATGTGAATCTTCCCCTAAGGTGGTGGAAGCATTAAGCAATGTTAAAGCAGTTCATGTTGCTACAGGAGATTATACAACATTCGTAGTATCTGATGATGGCGACGTGTATTCTTTCGGTTGTGGAGAATCCGCTAGTCTCGGGCATAATATCGCCGTGCCCGAGGAACAGGGGAATCGGCAACCGCACGTTTTAAGCCCAGAACTAGTCAGGTCTCTGAAGCAAATTAGCGAGCGGGTAGTTCAGATTAGCCTCACTAATTCAATTTACTGGAATGCACACACCTTTGCACTGACCGAGTCAGGGAAGTTGTATGCATTTGGTGCTGGAGACAAAGGGCAGCTTGGGGTCGAACTTCTGGCAAATCAAACCGAAAGGGGAAACCCAGAGCGGGTTGACATTGATCTAAATTAA

Protein sequence

METHLLLSLGTAKPLAVPMDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHVLTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPMTAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDIDLN
BLAST of Lsi04G006350 vs. Swiss-Prot
Match: HERC2_HUMAN (E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2)

HSP 1 Score: 149.8 bits (377), Expect = 8.7e-35
Identity = 114/356 (32.02%), Postives = 173/356 (48.60%), Query Frame = 1

Query: 176  IAGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAA--AGGGR 235
            I G     AVT+ G +Y+ G  + G+LG G TE  S P L+ S+Q + I + A  +GG  
Sbjct: 3991 IGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4050

Query: 236  TMLISDAGHVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSR 295
             + +S  G VY++G+   G+  +G +       P+V+ESL+ I VV  A G   +A ++ 
Sbjct: 4051 CLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTA 4110

Query: 296  EGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSV 355
             G +YT+  G   RLGH    + L+P+ L+ AL+   VV IA G      L C     +V
Sbjct: 4111 AGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVVDIACGSGDAQTL-CLTDDDTV 4170

Query: 356  YSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWG 415
            +S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG G
Sbjct: 4171 WSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4230

Query: 416  RYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN 475
             Y  LGHG+++    P+ V+ L   K + +ATG       ++DG+VY++G  +   LG  
Sbjct: 4231 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4290

Query: 476  IAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYA 530
                         +  P LV +L+      V     +++ W+  T     +GKL A
Sbjct: 4291 TT---------NAIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPASAGKLPA 4329

BLAST of Lsi04G006350 vs. Swiss-Prot
Match: UVR8_ARATH (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34
Identity = 118/382 (30.89%), Postives = 178/382 (46.60%), Query Frame = 1

Query: 161 LVAGETCCRREKSMAI-AGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSL 220
           + A E      K + I AG  HS+A+ S   V S+G    GQLGHG  E+   P  + +L
Sbjct: 5   MAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL 64

Query: 221 QGIRIIQAAAGGGRTMLISDAG-HVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFV 280
            G +I+    G   T+  S +G  VY++G   FG   +G   +  + TP  +++L  I +
Sbjct: 65  DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHGIRI 124

Query: 281 VQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGY 340
            Q A G+     ++ EG V ++    + +LG     + L P+ +  A E I +  +AAG 
Sbjct: 125 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGA 184

Query: 341 CYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHA 400
            +  A+        +Y  G G  G LG G RTD   P  +       +   +VA G  H 
Sbjct: 185 EHTAAVT---EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHT 244

Query: 401 AVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGD 460
             V   G + T+GW +YG LGHG+ E    P  +EALSN     ++ G   T  ++ DG 
Sbjct: 245 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 304

Query: 461 VYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHT 520
           +Y +G  +   +G         GN      SP  VR      ++VVQ+S      W  HT
Sbjct: 305 LYGWGWNKFGQVG--------VGNNLDQ-CSPVQVRF--PDDQKVVQVSCG----WR-HT 362

Query: 521 FALTESGKLYAFGAGDKGQLGV 541
            A+TE   ++A+G G  GQLG+
Sbjct: 365 LAVTERNNVFAWGRGTNGQLGI 362

BLAST of Lsi04G006350 vs. Swiss-Prot
Match: HERC2_MOUSE (E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3)

HSP 1 Score: 149.4 bits (376), Expect = 1.1e-34
Identity = 113/356 (31.74%), Postives = 173/356 (48.60%), Query Frame = 1

Query: 176  IAGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAA--AGGGR 235
            I G     AVT+ G +Y+ G  + G+LG G TE  S P L+ S+Q + I + A  +GG  
Sbjct: 3993 IGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKH 4052

Query: 236  TMLISDAGHVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSR 295
             + +S  G VY++G+   G+  +G +       P+V+ESL+ I VV  A G   +A ++ 
Sbjct: 4053 CLALSSEGEVYSWGEAEDGKLGHGNRSP--CDRPRVIESLRGIEVVDVAAGGAHSACVTA 4112

Query: 296  EGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSV 355
             G +YT+  G   RLGH    + L+P+ L+ AL+   V+ IA G      L C     +V
Sbjct: 4113 AGDLYTWGKGRYGRLGHSDSEDQLKPK-LVEALQGHRVIDIACGSGDAQTL-CLTDDDTV 4172

Query: 356  YSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWG 415
            +S G G  GKLG G     K P  I+   L  L  V V  G+  +  + + G V TWG G
Sbjct: 4173 WSWGDGDYGKLGRGGSDGCKVPMKID--SLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 4232

Query: 416  RYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN 475
             Y  LGHG+++    P+ V+ L   K + +ATG       ++DG+VY++G  +   LG  
Sbjct: 4233 DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDG 4292

Query: 476  IAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYA 530
                         +  P LV +L+      V     +++ W+  T     +GKL A
Sbjct: 4293 TT---------NAIQRPRLVAALQGKKVNRVACGSAHTLAWS--TSKPASAGKLPA 4331

BLAST of Lsi04G006350 vs. Swiss-Prot
Match: HERC1_HUMAN (Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 1.2e-31
Identity = 112/362 (30.94%), Postives = 172/362 (47.51%), Query Frame = 1

Query: 180 GHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISD 239
           G +  V+    VY +GSNSS QL  GT E+  +P+L  S    + I+A  G   T +IS 
Sbjct: 363 GDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEA--GQYCTFVIST 422

Query: 240 AGHVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNF-FTAVLSREGRVY 299
            G V A GK S+G    G    Q        E  + I  V ++ G+   T   + EG V+
Sbjct: 423 DGSVRACGKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFTTEGEVF 482

Query: 300 TFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGC 359
           ++  G   +LGH        P+ + G L+   VV ++AGY +  A+        +Y+ G 
Sbjct: 483 SWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVT---EDGELYTWGE 542

Query: 360 GLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGR-VCTWGWGRYGC 419
           G  G+LGHG       P L++    +      V+ G+ H   + +DGR V ++G G  G 
Sbjct: 543 GDFGRLGHGDSNSRNIPTLVKDISNVG----EVSCGSSHTIALSKDGRTVWSFGGGDNGK 602

Query: 420 LGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVP 479
           LGHG+      PKV+EAL  +    V  G  ++  ++  G VY++GCG  A LG      
Sbjct: 603 LGHGDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVYAWGCG--ACLG------ 662

Query: 480 EEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQ 539
              G+ +   L P+L+  L   + R+V +S+ +S     H  AL+   ++YA+G    GQ
Sbjct: 663 --CGSSEATALRPKLIEEL--AATRIVDVSIGDS-----HCLALSHDNEVYAWGNNSMGQ 698

BLAST of Lsi04G006350 vs. Swiss-Prot
Match: HERC2_DROME (Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 PE=1 SV=3)

HSP 1 Score: 137.5 bits (345), Expect = 4.5e-31
Identity = 111/356 (31.18%), Postives = 170/356 (47.75%), Query Frame = 1

Query: 172  KSMAIAGPGHSI-AVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAA-- 231
            + + +AG   S+ AVT  G +++ G  S G+LG G ++  + P L+ SLQ + + + A  
Sbjct: 4083 RPVQLAGGEQSLFAVTPDGKLFATGYGSGGRLGVGGSDSWAIPTLLGSLQHVFVKKVAVN 4142

Query: 232  AGGGRTMLISDAGHVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFT 291
            +GG   + ++  G VYA+G+   G+  +G         PK+VE L  + V   A G+  +
Sbjct: 4143 SGGKHCLALTTEGEVYAWGEGEDGKLGHG--NRMSYDRPKLVEHLNGMSVADIACGSAHS 4202

Query: 292  AVLSREGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHP 351
            A ++  G V T+  G   RLGH    + L P+ L+ AL     + IA G      L C  
Sbjct: 4203 AAITASGHVLTWGKGRYGRLGHGDSEDQLRPK-LVEALLGYRAIDIACGSGDAQTL-CIT 4262

Query: 352  SGMSVYSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVC 411
               +V+S G G  GKLG G     K P  IE   L  L  V V  G+  +  + + G V 
Sbjct: 4263 DDDNVWSWGDGDYGKLGRGGSDGCKLPYKIE--SLAGLGVVKVECGSQFSVALTKSGAVY 4322

Query: 412  TWGWGRYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESA 471
            TWG G +  LGHG+ +    PK V AL   K + +ATG       SD G+VY++G  +  
Sbjct: 4323 TWGKGDFHRLGHGSVDHVRRPKKVAALQGKKIISIATGSLHCVACSDSGEVYTWGDNDEG 4382

Query: 472  SLGHNIAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTES 525
             LG               +  P LV +L+   + +V+++       +AHT AL+ S
Sbjct: 4383 QLGDGTVTA---------IQRPRLVAALQ--GKHIVKVTC-----GSAHTLALSTS 4416

BLAST of Lsi04G006350 vs. TrEMBL
Match: A0A0A0KS37_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G593320 PE=4 SV=1)

HSP 1 Score: 1028.5 bits (2658), Expect = 3.1e-297
Identity = 509/542 (93.91%), Postives = 522/542 (96.31%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTSETAA+QFHSIPDQSVS IVT+ATSTFPQSKRHC GESDPGEFPLAANPSIVLHV
Sbjct: 1   MDATTSETAALQFHSIPDQSVSTIVTSATSTFPQSKRHCFGESDPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LTACNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMC+KRAIFKPM
Sbjct: 61  LTACNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T EQH+A+KQRCGGSWKLVLRFLVAGE+CCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS
Sbjct: 121 TPEQHEAMKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHGTTEE+S PRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA
Sbjct: 181 SGQLGHGTTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QGAQV+TTPK+VESLKDIFVVQAAIGNFFTAVLSREG VYTFSWG DSRLGHHTEPNDLE
Sbjct: 241 QGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           PRPL GALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE+CESSPKVVEAL NV
Sbjct: 361 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESSPKVVEALINV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN+ +PEE+GNRQPHVL PELVRSLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPELVRSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE LANQTERGNPE VDID
Sbjct: 481 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE-LANQTERGNPELVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. TrEMBL
Match: A0A061E727_THECC (Regulator of chromosome condensation (RCC1) family protein isoform 1 OS=Theobroma cacao GN=TCM_010675 PE=4 SV=1)

HSP 1 Score: 943.7 bits (2438), Expect = 1.0e-271
Identity = 469/542 (86.53%), Postives = 492/542 (90.77%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTS T  IQ+H+IPDQ ++AIV     TF +  RHC G+S PGEFPLAANPSIVLHV
Sbjct: 1   MDATTSGTPTIQYHNIPDQPITAIVAAPVPTFQRQVRHCFGDSTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LTACNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM
Sbjct: 61  LTACNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T E+ Q LKQRCG SWKLVLRFL+AGE CCRREKS AIAGPGHSIAVTS G VYSFGSNS
Sbjct: 121 TDEERQNLKQRCGESWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTSTGVVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHGTTEEE RPR IRSLQGIRIIQA+AG GRTMLISDAG VYAFGKDSFGEAEYG 
Sbjct: 181 SGQLGHGTTEEEWRPRQIRSLQGIRIIQASAGAGRTMLISDAGRVYAFGKDSFGEAEYGV 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG +++TTP+ VESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWG DS+LGH TEPND+E
Sbjct: 241 QGTKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGKDSKLGHQTEPNDVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           P+PL+GALENIPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PQPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES PKVVEALS V
Sbjct: 361 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSKV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN +V E QGNR  +VLSPELV SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN-SVAEGQGNRHANVLSPELVTSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL+ NQTERGNPERVDID
Sbjct: 481 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. TrEMBL
Match: A0A0D2SIW2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G174500 PE=4 SV=1)

HSP 1 Score: 940.3 bits (2429), Expect = 1.1e-270
Identity = 463/542 (85.42%), Postives = 491/542 (90.59%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTS T  +Q+H+IPDQ ++AIV    S F +  RHC G+S PGEFPLAANPSIVLHV
Sbjct: 1   MDATTSGTPTVQYHNIPDQPLTAIVAAPVSAFLRQVRHCFGDSTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LT CNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMCQ+RAIFKPM
Sbjct: 61  LTTCNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCQRRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T E+ Q+LK RCGGSWKLVLRFL+AGE CCRREKS AIAGPGHSIAVTS GAVYSFGSNS
Sbjct: 121 TDEERQSLKHRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTSSGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHG TEE+ RP+ IRSLQGIRIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG 
Sbjct: 181 SGQLGHGNTEEDWRPQQIRSLQGIRIIQAAAGAGRTMLISDAGRVYAFGKDSFGEAEYGV 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG +++TTP+ VESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWG DS+LGH TEPND+E
Sbjct: 241 QGTKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGKDSKLGHKTEPNDVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           P+PL+GALENIPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PQPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQP+VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE+CES PKVVEALSNV
Sbjct: 361 EQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSNV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN A   +QGNR  +VLSPELV SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNTAGEGQQGNRHANVLSPELVMSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL  NQTERGNPERVDID
Sbjct: 481 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELANNQTERGNPERVDID 535

Query: 559 LN 561
           LN
Sbjct: 541 LN 535

BLAST of Lsi04G006350 vs. TrEMBL
Match: A0A151U8S5_CAJCA (Putative E3 ubiquitin-protein ligase HERC2 (Fragment) OS=Cajanus cajan GN=KK1_019935 PE=4 SV=1)

HSP 1 Score: 939.5 bits (2427), Expect = 1.9e-270
Identity = 458/554 (82.67%), Postives = 503/554 (90.79%), Query Frame = 1

Query: 15  LAVPMDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSI 74
           LAVPMDATTS T  IQ+H+IPDQ ++AI+ +   TF + +RHC G+S PGEFPL+ANPSI
Sbjct: 1   LAVPMDATTSGTPTIQYHNIPDQPITAIIASPLPTFQRQQRHCFGDSTPGEFPLSANPSI 60

Query: 75  VLHVLTACNLDPQDLAKLEARSFVSF---------ATCSFFRQPANFAPDYELSISELAA 134
           VLHVLT CNLDPQDLAKLEA + + F         ATCSFFRQPANFAPD +LS+SELAA
Sbjct: 61  VLHVLTTCNLDPQDLAKLEASATMLFLFDLTCLLQATCSFFRQPANFAPDLDLSLSELAA 120

Query: 135 LDMCQKRAIFKPMTAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAV 194
           LDMCQKRAIFKPMT EQ Q LK+RCGGSWKLVLR+L+AGE CCRREKS AIAGPGHSIAV
Sbjct: 121 LDMCQKRAIFKPMTTEQRQDLKRRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAV 180

Query: 195 TSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYA 254
           TSKG VYSFGSNSSGQLGHGTTEEESRPR IR+LQGIRIIQA AG GRTML+SD+G VYA
Sbjct: 181 TSKGIVYSFGSNSSGQLGHGTTEEESRPRPIRTLQGIRIIQATAGAGRTMLVSDSGKVYA 240

Query: 255 FGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGAD 314
           FGKDSFGEAEYG QG++ +T+P++VESLK+IFVVQAAIGNFFTAVLSREGRVYTFSWG+D
Sbjct: 241 FGKDSFGEAEYGVQGSKTVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 300

Query: 315 SRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLG 374
            +LGHHT+ +D+EPRPL+GALE+IPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLG
Sbjct: 301 GKLGHHTDQSDVEPRPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLG 360

Query: 375 HGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEEC 434
           HGSRTDEK PRLIEQF LLNLQP+VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGN+EC
Sbjct: 361 HGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNDEC 420

Query: 435 ESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQP 494
           ES+PKVVEAL+NVKAVHVATGDYTTFVVS+DGDVYSFGCGESASLGHN    +EQGNR  
Sbjct: 421 ESAPKVVEALNNVKAVHVATGDYTTFVVSNDGDVYSFGCGESASLGHNAVGNDEQGNRHA 480

Query: 495 HVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLAN 554
           +VLSPELV SLKQI+ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL+AN
Sbjct: 481 NVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVAN 540

Query: 555 QTERGNPERVDIDL 560
           QTERGNPERV+IDL
Sbjct: 541 QTERGNPERVEIDL 554

BLAST of Lsi04G006350 vs. TrEMBL
Match: A0A0D2PUL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G174500 PE=4 SV=1)

HSP 1 Score: 937.2 bits (2421), Expect = 9.4e-270
Identity = 464/542 (85.61%), Postives = 491/542 (90.59%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTS T  +Q+H+IPDQ ++AIV    S F +  RHC G+S PGEFPLAANPSIVLHV
Sbjct: 1   MDATTSGTPTVQYHNIPDQPLTAIVAAPVSAFLRQVRHCFGDSTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LT CNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMCQ+RAIFKPM
Sbjct: 61  LTTCNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCQRRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T E+ Q+LK RCGGSWKLVLRFL+AGE CCRREKS AIAGPGHSIAVTS GAVYSFGSNS
Sbjct: 121 TDEERQSLKHRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTSSGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHG TEE+ RP+ IRSLQGIRIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG 
Sbjct: 181 SGQLGHGNTEEDWRPQQIRSLQGIRIIQAAAGAGRTMLISDAGRVYAFGKDSFGEAEYGV 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG +++TTP+ VESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWG DS+LGH TEPND+E
Sbjct: 241 QGTKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGKDSKLGHKTEPNDVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           P+PL+GALENIPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PQPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQP+VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE+CES PKVVEALSNV
Sbjct: 361 EQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSNV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN A  E QGNR  +VLSPELV SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNTA-GEGQGNRHANVLSPELVMSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL  NQTERGNPERVDID
Sbjct: 481 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELANNQTERGNPERVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. TAIR10
Match: AT3G26100.2 (AT3G26100.2 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 838.2 bits (2164), Expect = 3.0e-243
Identity = 415/542 (76.57%), Postives = 468/542 (86.35%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDAT S T ++Q+ ++P+QSVS   +   S F + KRHC G++ PGEFPLAANPSIVLHV
Sbjct: 1   MDAT-SGTPSLQYINLPEQSVST-TSPPVSPFQRPKRHCFGDTTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LT C LDP+DLA LEA       TCSFF QPANFAPD  LS+SELAALDMC KR IFKPM
Sbjct: 61  LTECRLDPRDLANLEA-------TCSFFSQPANFAPDINLSLSELAALDMCNKRVIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
             E+ Q +K+RCGGSWKLVLRFL+AGE CCRREKS A+AGPGHS+AVTSKG VY+FG N+
Sbjct: 121 NEEERQEMKRRCGGSWKLVLRFLLAGEACCRREKSQAVAGPGHSVAVTSKGEVYTFGYNN 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHG TE+E+R + +RSLQG+RIIQAAAG  RTMLISD G VYA GK+SFGEAEYG 
Sbjct: 181 SGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAARTMLISDDGKVYACGKESFGEAEYGG 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG + +TTP++V SLK+IFVVQAAIGN+FTAVLSREG+VYTFSWG D RLGH TE  D+E
Sbjct: 241 QGTKPVTTPQLVTSLKNIFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEAADVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           PRPL+G LEN+PVVQIAAGYCYLLALAC P+GMSVYSVGCGLGGKLGHGSRTDEK PR+I
Sbjct: 301 PRPLLGPLENVPVVQIAAGYCYLLALACQPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQ+LNLQP VVAAGAWHAAVVG+DGRVCTWGWGRYGCLGHGNEECES PKVVE LS+V
Sbjct: 361 EQFQILNLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLGHGNEECESVPKVVEGLSHV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGH+ +  +EQGNR  +VLSP +V SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSF-DEQGNRHANVLSPTVVTSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ER+VQISLTNSIYWNAHTFALTESGKL+AFGAGD+GQLG EL  NQ ER  PE+VDID
Sbjct: 481 VNERMVQISLTNSIYWNAHTFALTESGKLFAFGAGDQGQLGTELGKNQKERCVPEKVDID 532

Query: 559 LN 561
           L+
Sbjct: 541 LS 532

BLAST of Lsi04G006350 vs. TAIR10
Match: AT3G15430.1 (AT3G15430.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 190.7 bits (483), Expect = 2.5e-48
Identity = 157/479 (32.78%), Postives = 228/479 (47.60%), Query Frame = 1

Query: 74  IVLHVLTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRA 133
           ++L VLT+  L   DL  LE  S V   +  F+  P  F      S+++ AA  +C    
Sbjct: 17  LILEVLTSGRLSAVDLLSLELTSKVFGGSHGFY--PLKFR-----SLADYAASQLCSMHP 76

Query: 134 IFKPMTAEQHQALKQRCGGSWKLVLRFLVAGETCC----RREKSMAIAGPGHSIAVTSKG 193
           ++  M     + L   C G+WK +  FL + E         +  M IA   +   + +  
Sbjct: 77  VYVGMGLTTQKELFANCEGNWKRLFSFLQSVEQSSDMVETSQGKMQIATGKYHTLLINNS 136

Query: 194 AVYSFGSNSSGQLGHGT-TEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGK 253
            VYS G + SG L HG+ T +      I      ++ Q +A    +  +  +G V   G 
Sbjct: 137 KVYSCGVSLSGVLAHGSETTQCVAFTPIEFPFPAQVAQVSATQNHSAFVLQSGQVLTCGD 196

Query: 254 DSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRL 313
           +S     +    ++ I  PK+VE+LK     Q A G  FT  LSREG  YT       +L
Sbjct: 197 NSSHCCGH-LDTSRPIFRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAYTCGSNTHGQL 256

Query: 314 GHHTEPNDLEPRPLMGALENI----PVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKL 373
           GH     D   RP+   +E +    PVVQIAAG  Y+LA+       SVYS G G    L
Sbjct: 257 GH----GDTLDRPVPKVVEFLKTIGPVVQIAAGPSYVLAVT---QDGSVYSFGSGSNFCL 316

Query: 374 GHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEE 433
           GHG + DE QPR+I+ F+   +  + V+AG  HA  +  +GRV TWG G  G LGHG+E 
Sbjct: 317 GHGEQQDELQPRVIQAFKRKGIHILRVSAGDEHAVALDSNGRVYTWGKGYCGALGHGDEN 376

Query: 434 CESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQ 493
            + +P+V+  L+N  AV V      TFV+ + G +Y FG     SLG     P+      
Sbjct: 377 DKITPQVLVNLNNCLAVQVCARKRKTFVLVEGGLLYGFGWMGFGSLG----FPDR--GVS 436

Query: 494 PHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELL 544
             VL P ++  LK    RV Q+S    +Y   HT  +T+ G+++ FG  ++ QLG + L
Sbjct: 437 DKVLRPRVLECLK--PHRVSQVS--TGLY---HTIVVTQRGRIFGFGDNERAQLGHDSL 467

BLAST of Lsi04G006350 vs. TAIR10
Match: AT5G63860.1 (AT5G63860.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 149.4 bits (376), Expect = 6.4e-36
Identity = 118/382 (30.89%), Postives = 178/382 (46.60%), Query Frame = 1

Query: 161 LVAGETCCRREKSMAI-AGPGHSIAVTSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSL 220
           + A E      K + I AG  HS+A+ S   V S+G    GQLGHG  E+   P  + +L
Sbjct: 5   MAADEVTAPPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSAL 64

Query: 221 QGIRIIQAAAGGGRTMLISDAG-HVYAFGKDSFGEAEYGAQGAQVITTPKVVESLKDIFV 280
            G +I+    G   T+  S +G  VY++G   FG   +G   +  + TP  +++L  I +
Sbjct: 65  DGHQIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHG--NSSDLFTPLPIKALHGIRI 124

Query: 281 VQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLEPRPLMGALENIPVVQIAAGY 340
            Q A G+     ++ EG V ++    + +LG     + L P+ +  A E I +  +AAG 
Sbjct: 125 KQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ-AFEGIRIKMVAAGA 184

Query: 341 CYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHA 400
            +  A+        +Y  G G  G LG G RTD   P  +       +   +VA G  H 
Sbjct: 185 EHTAAVT---EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMS--MVACGWRHT 244

Query: 401 AVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGD 460
             V   G + T+GW +YG LGHG+ E    P  +EALSN     ++ G   T  ++ DG 
Sbjct: 245 ISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGGWRHTMALTSDGK 304

Query: 461 VYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHT 520
           +Y +G  +   +G         GN      SP  VR      ++VVQ+S      W  HT
Sbjct: 305 LYGWGWNKFGQVG--------VGNNLDQ-CSPVQVRF--PDDQKVVQVSCG----WR-HT 362

Query: 521 FALTESGKLYAFGAGDKGQLGV 541
            A+TE   ++A+G G  GQLG+
Sbjct: 365 LAVTERNNVFAWGRGTNGQLGI 362

BLAST of Lsi04G006350 vs. TAIR10
Match: AT5G16040.1 (AT5G16040.1 Regulator of chromosome condensation (RCC1) family protein)

HSP 1 Score: 131.0 bits (328), Expect = 2.4e-30
Identity = 100/331 (30.21%), Postives = 161/331 (48.64%), Query Frame = 1

Query: 176 IAGPGHSIAVTSKGAVYSFGSNSSGQLGHGT-TEEESRPRLIRSLQGIRIIQAAAGGGRT 235
           + G  +S+A+   G ++++G N  G LGH   T+ ES P L++SL  ++I+QAA GG   
Sbjct: 44  VGGSRNSLAICDDGKLFTWGWNQRGTLGHPPETKTESTPSLVKSLANVKIVQAAIGGWHC 103

Query: 236 MLISDAGHVYAFGKDSFGEA-------EYGAQGAQVITTPKVVESLKDIFVVQAAIGNFF 295
           + + D G  YA+G + +G+        E G    + I  PK     + + V Q A G   
Sbjct: 104 LAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIVIPK--RCAQQLTVRQVAAGGTH 163

Query: 296 TAVLSREGRVYTFSWGADSRLGHHTEPNDLE----PRPLMGALENIPVVQIAAGYCYLLA 355
           + VL+REG V+T+        G    P D++    P  + G LEN+ ++ + A +     
Sbjct: 164 SVVLTREGYVWTW--------GQPWPPGDIKQISVPVRVQG-LENVRLIAVGAFH----N 223

Query: 356 LACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGR 415
           LA    G ++++ G    G+LG G       P  ++    L L  V +AAG WH+  +  
Sbjct: 224 LALKEDG-TLWAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLTL--VDIAAGGWHSTALTN 283

Query: 416 DGRVCTWGWGRYGCLGHGNEECESS--PKVVEALSNVKAVHVATGDYTTFVVSDDGDVYS 475
           +G V  WG G +G LG G+ +  S   P+ V  L+    + V+ G   +  ++ DG ++S
Sbjct: 284 EGEVYGWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGEDIIQVSCGGTHSVALTRDGRIFS 343

Query: 476 FGCGESASLGHNIAVPEEQGNRQP-HVLSPE 492
           FG G+   LG+   V   Q    P H+  PE
Sbjct: 344 FGRGDHGRLGYGRKVTTGQPLELPIHIPPPE 356

BLAST of Lsi04G006350 vs. TAIR10
Match: AT1G69710.1 (AT1G69710.1 Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain)

HSP 1 Score: 126.3 bits (316), Expect = 5.8e-29
Identity = 103/370 (27.84%), Postives = 166/370 (44.86%), Query Frame = 1

Query: 197 NSSGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEY 256
           + +G   + TTE+   P+ + S   +     A G    +L++  G ++++G+   G+  +
Sbjct: 275 SGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVLVTKQGEIFSWGEGKGGKLGH 334

Query: 257 GAQ-GAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSR----LGHH 316
           G +  AQ    PK + S++ +     A G+F T  +++ G +Y  SWG  +     LGH 
Sbjct: 335 GLETDAQ---KPKFISSVRGLGFKSLACGDFHTCAITQSGDLY--SWGDGTHNVDLLGHG 394

Query: 317 TEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTD 376
            E +   P+ + G L+ + V  +A G  +   +A   S   +++ G G  G LGHG R  
Sbjct: 395 NESSCWIPKRVTGDLQGLYVSDVACGPWHTAVVA---SSGQLFTFGDGTFGALGHGDRRS 454

Query: 377 EKQPRLIEQFQLLNLQPVVVAAGAWHAAVV-------------GRDGRVCTWGWGRYGCL 436
              PR +E   L+ L    VA G WH A V                G+V TWG G  G L
Sbjct: 455 TSVPREVES--LIGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQL 514

Query: 437 GHGNEECESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPE 496
           GHG+ + +  P+ V +L+N     VA G   T   +  G VY+ G      LG+    P 
Sbjct: 515 GHGDNDTKLLPECVISLTNENICQVACGHSLTVSRTSRGHVYTMGSTAYGQLGN----PT 574

Query: 497 EQGNRQPHVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQL 549
            +GN       PE      ++   +V+ S+      + H   LT   ++Y +G G  GQL
Sbjct: 575 AKGN------FPE------RVEGDIVEASVEEIACGSYHVAVLTSKSEIYTWGKGLNGQL 618

BLAST of Lsi04G006350 vs. NCBI nr
Match: gi|659090625|ref|XP_008446114.1| (PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo])

HSP 1 Score: 1032.7 bits (2669), Expect = 2.3e-298
Identity = 511/542 (94.28%), Postives = 522/542 (96.31%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTSETAA+QFHSIPDQSVS IVT+ATSTFPQ KRHC GESDPGEFPLAANPSIVLHV
Sbjct: 1   MDATTSETAALQFHSIPDQSVSTIVTSATSTFPQPKRHCFGESDPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LTACNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMC+KRAIFKPM
Sbjct: 61  LTACNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T EQHQALKQRCGGSWKLVLRFLVAGE+CCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS
Sbjct: 121 TPEQHQALKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHGTTEE+S PRL+RSLQGIRIIQAA GGGRTMLISDAGHVYAFGKDSFGEAEYGA
Sbjct: 181 SGQLGHGTTEEQSPPRLVRSLQGIRIIQAAVGGGRTMLISDAGHVYAFGKDSFGEAEYGA 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QGAQV+TTPK+VESLKDIFVVQAAIGNFFTA+LSREG VYTFSWG DSRLGHHTEPNDLE
Sbjct: 241 QGAQVVTTPKLVESLKDIFVVQAAIGNFFTAILSREGTVYTFSWGTDSRLGHHTEPNDLE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           PRPL GALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEAL NV
Sbjct: 361 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALINV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN+ VPEEQGNRQPHVLSPELVRSLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVVPEEQGNRQPHVLSPELVRSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           I+ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE LANQTERGNPERVDID
Sbjct: 481 INERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE-LANQTERGNPERVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. NCBI nr
Match: gi|449435009|ref|XP_004135288.1| (PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus])

HSP 1 Score: 1028.5 bits (2658), Expect = 4.4e-297
Identity = 509/542 (93.91%), Postives = 522/542 (96.31%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTSETAA+QFHSIPDQSVS IVT+ATSTFPQSKRHC GESDPGEFPLAANPSIVLHV
Sbjct: 1   MDATTSETAALQFHSIPDQSVSTIVTSATSTFPQSKRHCFGESDPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LTACNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMC+KRAIFKPM
Sbjct: 61  LTACNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCRKRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T EQH+A+KQRCGGSWKLVLRFLVAGE+CCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS
Sbjct: 121 TPEQHEAMKQRCGGSWKLVLRFLVAGESCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHGTTEE+S PRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA
Sbjct: 181 SGQLGHGTTEEQSPPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QGAQV+TTPK+VESLKDIFVVQAAIGNFFTAVLSREG VYTFSWG DSRLGHHTEPNDLE
Sbjct: 241 QGAQVVTTPKLVESLKDIFVVQAAIGNFFTAVLSREGTVYTFSWGTDSRLGHHTEPNDLE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           PRPL GALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PRPLKGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE+CESSPKVVEAL NV
Sbjct: 361 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESSPKVVEALINV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN+ +PEE+GNRQPHVL PELVRSLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNVVLPEEEGNRQPHVLKPELVRSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE LANQTERGNPE VDID
Sbjct: 481 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVE-LANQTERGNPELVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. NCBI nr
Match: gi|590695543|ref|XP_007044919.1| (Regulator of chromosome condensation (RCC1) family protein isoform 1 [Theobroma cacao])

HSP 1 Score: 943.7 bits (2438), Expect = 1.4e-271
Identity = 469/542 (86.53%), Postives = 492/542 (90.77%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTS T  IQ+H+IPDQ ++AIV     TF +  RHC G+S PGEFPLAANPSIVLHV
Sbjct: 1   MDATTSGTPTIQYHNIPDQPITAIVAAPVPTFQRQVRHCFGDSTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LTACNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM
Sbjct: 61  LTACNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T E+ Q LKQRCG SWKLVLRFL+AGE CCRREKS AIAGPGHSIAVTS G VYSFGSNS
Sbjct: 121 TDEERQNLKQRCGESWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTSTGVVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHGTTEEE RPR IRSLQGIRIIQA+AG GRTMLISDAG VYAFGKDSFGEAEYG 
Sbjct: 181 SGQLGHGTTEEEWRPRQIRSLQGIRIIQASAGAGRTMLISDAGRVYAFGKDSFGEAEYGV 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG +++TTP+ VESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWG DS+LGH TEPND+E
Sbjct: 241 QGTKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGKDSKLGHQTEPNDVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           P+PL+GALENIPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PQPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKHPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECES PKVVEALS V
Sbjct: 361 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESVPKVVEALSKV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN +V E QGNR  +VLSPELV SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN-SVAEGQGNRHANVLSPELVTSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL+ NQTERGNPERVDID
Sbjct: 481 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVNNQTERGNPERVDID 534

Query: 559 LN 561
           LN
Sbjct: 541 LN 534

BLAST of Lsi04G006350 vs. NCBI nr
Match: gi|823158871|ref|XP_012479270.1| (PREDICTED: ultraviolet-B receptor UVR8-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 940.3 bits (2429), Expect = 1.6e-270
Identity = 463/542 (85.42%), Postives = 491/542 (90.59%), Query Frame = 1

Query: 19  MDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSIVLHV 78
           MDATTS T  +Q+H+IPDQ ++AIV    S F +  RHC G+S PGEFPLAANPSIVLHV
Sbjct: 1   MDATTSGTPTVQYHNIPDQPLTAIVAAPVSAFLRQVRHCFGDSTPGEFPLAANPSIVLHV 60

Query: 79  LTACNLDPQDLAKLEARSFVSFATCSFFRQPANFAPDYELSISELAALDMCQKRAIFKPM 138
           LT CNLDPQDLAKLEA       TCSFFRQPANFAPDYELSISELAALDMCQ+RAIFKPM
Sbjct: 61  LTTCNLDPQDLAKLEA-------TCSFFRQPANFAPDYELSISELAALDMCQRRAIFKPM 120

Query: 139 TAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAVTSKGAVYSFGSNS 198
           T E+ Q+LK RCGGSWKLVLRFL+AGE CCRREKS AIAGPGHSIAVTS GAVYSFGSNS
Sbjct: 121 TDEERQSLKHRCGGSWKLVLRFLLAGEACCRREKSQAIAGPGHSIAVTSSGAVYSFGSNS 180

Query: 199 SGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYAFGKDSFGEAEYGA 258
           SGQLGHG TEE+ RP+ IRSLQGIRIIQAAAG GRTMLISDAG VYAFGKDSFGEAEYG 
Sbjct: 181 SGQLGHGNTEEDWRPQQIRSLQGIRIIQAAAGAGRTMLISDAGRVYAFGKDSFGEAEYGV 240

Query: 259 QGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGADSRLGHHTEPNDLE 318
           QG +++TTP+ VESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWG DS+LGH TEPND+E
Sbjct: 241 QGTKLVTTPQPVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGKDSKLGHKTEPNDVE 300

Query: 319 PRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLGHGSRTDEKQPRLI 378
           P+PL+GALENIPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLGHGSRTDEK PRLI
Sbjct: 301 PQPLLGALENIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLGHGSRTDEKYPRLI 360

Query: 379 EQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEECESSPKVVEALSNV 438
           EQFQLLNLQP+VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNE+CES PKVVEALSNV
Sbjct: 361 EQFQLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEDCESVPKVVEALSNV 420

Query: 439 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQPHVLSPELVRSLKQ 498
           KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHN A   +QGNR  +VLSPELV SLKQ
Sbjct: 421 KAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNTAGEGQQGNRHANVLSPELVMSLKQ 480

Query: 499 ISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLANQTERGNPERVDID 558
           ++ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL  NQTERGNPERVDID
Sbjct: 481 VNERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELANNQTERGNPERVDID 535

Query: 559 LN 561
           LN
Sbjct: 541 LN 535

BLAST of Lsi04G006350 vs. NCBI nr
Match: gi|1012364553|gb|KYP75735.1| (putative E3 ubiquitin-protein ligase HERC2, partial [Cajanus cajan])

HSP 1 Score: 939.5 bits (2427), Expect = 2.7e-270
Identity = 458/554 (82.67%), Postives = 503/554 (90.79%), Query Frame = 1

Query: 15  LAVPMDATTSETAAIQFHSIPDQSVSAIVTNATSTFPQSKRHCLGESDPGEFPLAANPSI 74
           LAVPMDATTS T  IQ+H+IPDQ ++AI+ +   TF + +RHC G+S PGEFPL+ANPSI
Sbjct: 1   LAVPMDATTSGTPTIQYHNIPDQPITAIIASPLPTFQRQQRHCFGDSTPGEFPLSANPSI 60

Query: 75  VLHVLTACNLDPQDLAKLEARSFVSF---------ATCSFFRQPANFAPDYELSISELAA 134
           VLHVLT CNLDPQDLAKLEA + + F         ATCSFFRQPANFAPD +LS+SELAA
Sbjct: 61  VLHVLTTCNLDPQDLAKLEASATMLFLFDLTCLLQATCSFFRQPANFAPDLDLSLSELAA 120

Query: 135 LDMCQKRAIFKPMTAEQHQALKQRCGGSWKLVLRFLVAGETCCRREKSMAIAGPGHSIAV 194
           LDMCQKRAIFKPMT EQ Q LK+RCGGSWKLVLR+L+AGE CCRREKS AIAGPGHSIAV
Sbjct: 121 LDMCQKRAIFKPMTTEQRQDLKRRCGGSWKLVLRYLMAGEACCRREKSQAIAGPGHSIAV 180

Query: 195 TSKGAVYSFGSNSSGQLGHGTTEEESRPRLIRSLQGIRIIQAAAGGGRTMLISDAGHVYA 254
           TSKG VYSFGSNSSGQLGHGTTEEESRPR IR+LQGIRIIQA AG GRTML+SD+G VYA
Sbjct: 181 TSKGIVYSFGSNSSGQLGHGTTEEESRPRPIRTLQGIRIIQATAGAGRTMLVSDSGKVYA 240

Query: 255 FGKDSFGEAEYGAQGAQVITTPKVVESLKDIFVVQAAIGNFFTAVLSREGRVYTFSWGAD 314
           FGKDSFGEAEYG QG++ +T+P++VESLK+IFVVQAAIGNFFTAVLSREGRVYTFSWG+D
Sbjct: 241 FGKDSFGEAEYGVQGSKTVTSPQLVESLKNIFVVQAAIGNFFTAVLSREGRVYTFSWGSD 300

Query: 315 SRLGHHTEPNDLEPRPLMGALENIPVVQIAAGYCYLLALACHPSGMSVYSVGCGLGGKLG 374
            +LGHHT+ +D+EPRPL+GALE+IPVVQIAAGYCYLL LAC PSGMSVYSVGCGLGGKLG
Sbjct: 301 GKLGHHTDQSDVEPRPLLGALEDIPVVQIAAGYCYLLCLACQPSGMSVYSVGCGLGGKLG 360

Query: 375 HGSRTDEKQPRLIEQFQLLNLQPVVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNEEC 434
           HGSRTDEK PRLIEQF LLNLQP+VVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGN+EC
Sbjct: 361 HGSRTDEKYPRLIEQFGLLNLQPMVVAAGAWHAAVVGRDGRVCTWGWGRYGCLGHGNDEC 420

Query: 435 ESSPKVVEALSNVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHNIAVPEEQGNRQP 494
           ES+PKVVEAL+NVKAVHVATGDYTTFVVS+DGDVYSFGCGESASLGHN    +EQGNR  
Sbjct: 421 ESAPKVVEALNNVKAVHVATGDYTTFVVSNDGDVYSFGCGESASLGHNAVGNDEQGNRHA 480

Query: 495 HVLSPELVRSLKQISERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGVELLAN 554
           +VLSPELV SLKQI+ERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLG+EL+AN
Sbjct: 481 NVLSPELVTSLKQINERVVQISLTNSIYWNAHTFALTESGKLYAFGAGDKGQLGIELVAN 540

Query: 555 QTERGNPERVDIDL 560
           QTERGNPERV+IDL
Sbjct: 541 QTERGNPERVEIDL 554

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
HERC2_HUMAN8.7e-3532.02E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2[more]
UVR8_ARATH1.1e-3430.89Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1 SV=1[more]
HERC2_MOUSE1.1e-3431.74E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3[more]
HERC1_HUMAN1.2e-3130.94Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1 PE=1 SV=2[more]
HERC2_DROME4.5e-3131.18Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster GN=HERC2 P... [more]
Match NameE-valueIdentityDescription
A0A0A0KS37_CUCSA3.1e-29793.91Uncharacterized protein OS=Cucumis sativus GN=Csa_5G593320 PE=4 SV=1[more]
A0A061E727_THECC1.0e-27186.53Regulator of chromosome condensation (RCC1) family protein isoform 1 OS=Theobrom... [more]
A0A0D2SIW2_GOSRA1.1e-27085.42Uncharacterized protein OS=Gossypium raimondii GN=B456_005G174500 PE=4 SV=1[more]
A0A151U8S5_CAJCA1.9e-27082.67Putative E3 ubiquitin-protein ligase HERC2 (Fragment) OS=Cajanus cajan GN=KK1_01... [more]
A0A0D2PUL2_GOSRA9.4e-27085.61Uncharacterized protein OS=Gossypium raimondii GN=B456_005G174500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G26100.23.0e-24376.57 Regulator of chromosome condensation (RCC1) family protein[more]
AT3G15430.12.5e-4832.78 Regulator of chromosome condensation (RCC1) family protein[more]
AT5G63860.16.4e-3630.89 Regulator of chromosome condensation (RCC1) family protein[more]
AT5G16040.12.4e-3030.21 Regulator of chromosome condensation (RCC1) family protein[more]
AT1G69710.15.8e-2927.84 Regulator of chromosome condensation (RCC1) family with FYVE zinc fi... [more]
Match NameE-valueIdentityDescription
gi|659090625|ref|XP_008446114.1|2.3e-29894.28PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Cucumis melo][more]
gi|449435009|ref|XP_004135288.1|4.4e-29793.91PREDICTED: ultraviolet-B receptor UVR8 [Cucumis sativus][more]
gi|590695543|ref|XP_007044919.1|1.4e-27186.53Regulator of chromosome condensation (RCC1) family protein isoform 1 [Theobroma ... [more]
gi|823158871|ref|XP_012479270.1|1.6e-27085.42PREDICTED: ultraviolet-B receptor UVR8-like isoform X1 [Gossypium raimondii][more]
gi|1012364553|gb|KYP75735.1|2.7e-27082.67putative E3 ubiquitin-protein ligase HERC2, partial [Cajanus cajan][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016020 membrane
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G006350.1Lsi04G006350.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PRINTSPR00633RCCNDNSATIONcoord: 452..473
score: 3.1E-13coord: 297..311
score: 3.1E-13coord: 394..412
score: 3.1E-13coord: 241..257
score: 3.1E-13coord: 191..207
score: 3.1E-13coord: 281..297
score: 3.1
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 404..453
score: 8.1E-14coord: 188..237
score: 4.5E-12coord: 456..507
score: 4.8E-5coord: 353..401
score: 4.9E-5coord: 294..342
score: 9.
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 391..401
scor
IPR000408Regulator of chromosome condensation, RCC1PROFILEPS50012RCC1_3coord: 405..456
score: 14.042coord: 351..404
score: 11.288coord: 189..240
score: 15.489coord: 525..560
score: 9.358coord: 457..524
score: 9.821coord: 241..294
score: 10.524coord: 295..347
score: 10
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3DG3DSA:2.130.10.30coord: 177..555
score: 6.5
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIunknownSSF50985RCC1/BLIP-IIcoord: 173..473
score: 2.35
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 19..230
score: 0.0coord: 251..559
score:
NoneNo IPR availablePANTHERPTHR22870:SF192SUBFAMILY NOT NAMEDcoord: 19..230
score: 0.0coord: 251..559
score:

The following gene(s) are paralogous to this gene:

None