Lsi04G005870 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G005870
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	ABC transporter B family member 26
Location	chr04 : 5382952 .. 5383440 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCGTTCATTTGCAATATACAAGTTCCTCGTCCCAATCTTTTGCTTTCTCGCCAGCTTCATGTCGATAAAATTCGCTCTCGAGGACTTCCTTTCACCAACGATAAGGTTCTGCGGTGGAATCATTTCTCAATCAATTGTCGATTCCTCTTACCTCCTCCGAAGTCAGCCATTAACGGATATGGAATCTCGGTCCCGAGTTCTTCGGAAGAGCGAGAAGAAGGCCATGGCGAAGCTGAGTTTGATATTGTAGATAAGCTTTGGGGATTGCTTGGCAATCTACGTTCGATTTTGCCTGGTGGGAGCTGGTGGAGCTTATCCGATGAAGCTGAAGTCAGAATTTCGGTTGAGCCAGTGACTGTGACGCGGGCTCTTGGCAGGATGTGGGACCTGGTTGCTAGAGACCGTTGGATCATCTACTCCGCATTTTCTGTTTTGGTTATTGCGGCGGTCTCTCTCTCTCTCTCTCCCTCTCTCCCGCTCTAG

mRNA sequence

ATGTCTTCGTTCATTTGCAATATACAAGTTCCTCGTCCCAATCTTTTGCTTTCTCGCCAGCTTCATGTCGATAAAATTCGCTCTCGAGGACTTCCTTTCACCAACGATAAGGTTCTGCGGTGGAATCATTTCTCAATCAATTGTCGATTCCTCTTACCTCCTCCGAAGTCAGCCATTAACGGATATGGAATCTCGGTCCCGAGTTCTTCGGAAGAGCGAGAAGAAGGCCATGGCGAAGCTGAGTTTGATATTGTAGATAAGCTTTGGGGATTGCTTGGCAATCTACGTTCGATTTTGCCTGGTGGGAGCTGGTGGAGCTTATCCGATGAAGCTGAAGTCAGAATTTCGGTTGAGCCAGTGACTGTGACGCGGGCTCTTGGCAGGATGTGGGACCTGGTTGCTAGAGACCGTTGGATCATCTACTCCGCATTTTCTGTTTTGGTTATTGCGGCGGTCTCTCTCTCTCTCTCTCCCTCTCTCCCGCTCTAG

Coding sequence (CDS)

ATGTCTTCGTTCATTTGCAATATACAAGTTCCTCGTCCCAATCTTTTGCTTTCTCGCCAGCTTCATGTCGATAAAATTCGCTCTCGAGGACTTCCTTTCACCAACGATAAGGTTCTGCGGTGGAATCATTTCTCAATCAATTGTCGATTCCTCTTACCTCCTCCGAAGTCAGCCATTAACGGATATGGAATCTCGGTCCCGAGTTCTTCGGAAGAGCGAGAAGAAGGCCATGGCGAAGCTGAGTTTGATATTGTAGATAAGCTTTGGGGATTGCTTGGCAATCTACGTTCGATTTTGCCTGGTGGGAGCTGGTGGAGCTTATCCGATGAAGCTGAAGTCAGAATTTCGGTTGAGCCAGTGACTGTGACGCGGGCTCTTGGCAGGATGTGGGACCTGGTTGCTAGAGACCGTTGGATCATCTACTCCGCATTTTCTGTTTTGGTTATTGCGGCGGTCTCTCTCTCTCTCTCTCCCTCTCTCCCGCTCTAG

Protein sequence

MSSFICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPKSAINGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVSLSLSPSLPL

Homology

[Close]

BLAST of Lsi04G005870 vs. Swiss-Prot
Match: AB26B_ARATH (ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABCB26 PE=2 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.5e-21
Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 1


Query: 24  DKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPK-SAINGYGISVPSSSEEREEGHGEAEF 83
           D IR + L F  +  L ++  S    + LP    S +NG      + + E  EG G+   
Sbjct: 27  DTIRRKNLRFVRNPRLSFSLQSSTRNYRLPSINCSTVNG----AVAETAEYYEGEGD-NV 86

Query: 84  DIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPVTVTRALGRMWDLVARDRWIIYS 143
            + +K+   +  LR+ILPGGSWWS SDE + R   +PVTV RAL RMW+LVA DRW+I++
Sbjct: 87  SLAEKIRQCIDFLRTILPGGSWWSFSDEVDGRFIAKPVTVWRALSRMWELVAEDRWVIFA 146

Query: 144 AFSVLVIAAVS 154
           AFS L++AA+S
Sbjct: 147 AFSTLIVAALS 152

[Close]

BLAST of Lsi04G005870 vs. TrEMBL
Match: A0A0A0KVH9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598690 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.7e-73
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 1


Query: 1   MSSFICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPKSAIN 60
           MSSFICNIQVP PNLLL RQLHVDKIRSRGL FT++K+LRWNH SI+CRFLLPP KSAIN
Sbjct: 1   MSSFICNIQVPHPNLLLLRQLHVDKIRSRGLTFTDNKILRWNHLSIDCRFLLPPLKSAIN 60

Query: 61  GYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPV 120
           GYGISVPSSSEEREE  GEAEFDIVDKL GLLG+LRSILPGGSWWSLSDEAEVRISVEPV
Sbjct: 61  GYGISVPSSSEEREESRGEAEFDIVDKLRGLLGHLRSILPGGSWWSLSDEAEVRISVEPV 120

Query: 121 TVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           TVTRALGRMWDLV+RDRWIIYSAFSVLVIAA+S
Sbjct: 121 TVTRALGRMWDLVSRDRWIIYSAFSVLVIAALS 153

[Close]

BLAST of Lsi04G005870 vs. TrEMBL
Match: M5Y3M4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002192mg PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 4.8e-25
Identity = 70/159 (44.03%), Postives = 99/159 (62.26%), Query Frame = 1


Query: 5   ICNIQVP--------RPNLLLSRQ-LHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPP 64
           +CN+  P        +P +LL+ Q LH     S     T  ++    H+S + RF   PP
Sbjct: 5   LCNLHAPLLSSFHHKQPLILLTPQKLH--HFTSATRTSTKPRLSLSPHYSNSRRFRFSPP 64

Query: 65  KS-AINGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVR 124
           KS +INGY      ++EE +    E E +++++L  L   LRSILPGG+WWS SDEA++R
Sbjct: 65  KSTSINGY------AAEEYKNDPRETEVELLERLRRLFAFLRSILPGGTWWSFSDEAQIR 124

Query: 125 ISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           I  +PVTV RAL RMW LV+RDRW+I++AFS L++AA+S
Sbjct: 125 IFAKPVTVVRALTRMWGLVSRDRWVIFAAFSALIVAALS 155

[Close]

BLAST of Lsi04G005870 vs. TrEMBL
Match: W9RCR2_9ROSA (ABC transporter B family member 26 OS=Morus notabilis GN=L484_027710 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.8e-24
Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 1


Query: 5   ICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWN---------HFSINCRFLLPPP 64
           +CN Q PR    L+ +  + +   + L FT+   LR +         H S + R    P 
Sbjct: 5   LCNTQ-PRLLSSLNHRRTLIRTHHKNLHFTSASKLRPSLSLSPFQSLHLSNSRRVPSLPL 64

Query: 65  KSA-INGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVR 124
           KSA INGY  SV   +EE  +  GEAE D+ ++L   +  +RSILPGGSWW  S++ EVR
Sbjct: 65  KSASINGY--SVHDGAEEYVKSRGEAEVDLSERLRRWMAFVRSILPGGSWWGFSEDVEVR 124

Query: 125 ISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           I  EPVTV+RAL RMW LVA DRWII++AFS L++AA+S
Sbjct: 125 ILAEPVTVSRALVRMWQLVANDRWIIFAAFSTLIVAALS 160

[Close]

BLAST of Lsi04G005870 vs. TrEMBL
Match: A0A097P9P2_HEVBR (ABC transporter family protein OS=Hevea brasiliensis GN=ABCB26 PE=2 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 4.2e-21
Identity = 64/158 (40.51%), Postives = 91/158 (57.59%), Query Frame = 1


Query: 1   MSSFICNIQVPRPNLLLSRQLHVDKIRSRGL-PFTNDKVLRWN--HFSINC--RFLLPPP 60
           M+  +CN   P     L   LH    R   + P  N K LR++   FS++   R   P  
Sbjct: 1   MAVLLCN---PLAQRCLLSSLHCKNQRPLSIRPAANTK-LRFSPSEFSLSSGRRCFCPLK 60

Query: 61  KSAINGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRI 120
            S+ING+ I+     E+ E    E  F++  ++      L SILPGG+WWS S++ E++ 
Sbjct: 61  SSSINGFSIAKKDHVEQFEGEQREENFELHGRIRKFFEFLPSILPGGNWWSFSEDVEIKF 120

Query: 121 SVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
             +PVT+ RALGRMW LVA DRW+I++AFSVL++AAVS
Sbjct: 121 LAKPVTMWRALGRMWQLVAHDRWVIFAAFSVLIVAAVS 154

[Close]

BLAST of Lsi04G005870 vs. TrEMBL
Match: I1J538_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G026000 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20
Identity = 54/102 (52.94%), Postives = 73/102 (71.57%), Query Frame = 1


Query: 53  PPPKSA-INGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEA 112
           PPPK A ING  ISVP++ E   E    +   ++D++   +G L SILPGG WW  S + 
Sbjct: 55  PPPKCASING--ISVPNNPEASGEQQVYSASGLLDRIRKWVGFLPSILPGGRWWEFSGDV 114

Query: 113 EVRISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           +V++  +PVTV RALG+MWDLVARDRW+I++AFS L++AAVS
Sbjct: 115 DVQVVAQPVTVWRALGKMWDLVARDRWVIFAAFSALIVAAVS 154

[Close]

BLAST of Lsi04G005870 vs. TAIR10
Match: AT1G70610.1 (AT1G70610.1 transporter associated with antigen processing protein 1)

HSP 1 Score: 102.8 bits (255), Expect = 2.0e-22
Identity = 56/131 (42.75%), Postives = 79/131 (60.31%), Query Frame = 1


Query: 24  DKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPK-SAINGYGISVPSSSEEREEGHGEAEF 83
           D IR + L F  +  L ++  S    + LP    S +NG      + + E  EG G+   
Sbjct: 27  DTIRRKNLRFVRNPRLSFSLQSSTRNYRLPSINCSTVNG----AVAETAEYYEGEGD-NV 86

Query: 84  DIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPVTVTRALGRMWDLVARDRWIIYS 143
            + +K+   +  LR+ILPGGSWWS SDE + R   +PVTV RAL RMW+LVA DRW+I++
Sbjct: 87  SLAEKIRQCIDFLRTILPGGSWWSFSDEVDGRFIAKPVTVWRALSRMWELVAEDRWVIFA 146

Query: 144 AFSVLVIAAVS 154
           AFS L++AA+S
Sbjct: 147 AFSTLIVAALS 152

[Close]

BLAST of Lsi04G005870 vs. NCBI nr
Match: gi|659090721|ref|XP_008446165.1| (PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 283.9 bits (725), Expect = 1.8e-73
Identity = 139/153 (90.85%), Postives = 145/153 (94.77%), Query Frame = 1


Query: 1   MSSFICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPKSAIN 60
           MSSFICNIQVP PNLLLSRQLHVDKIRS+GL FT++K LRWNH S +CRFLLPP KSAIN
Sbjct: 1   MSSFICNIQVPHPNLLLSRQLHVDKIRSQGLTFTDNKALRWNHLSTDCRFLLPPLKSAIN 60

Query: 61  GYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPV 120
           GYGISVPSSSEEREE HGEAEFDIVDKL GLLG+LRSILPGGSWWSLSDEAEVRISVEPV
Sbjct: 61  GYGISVPSSSEEREESHGEAEFDIVDKLRGLLGHLRSILPGGSWWSLSDEAEVRISVEPV 120

Query: 121 TVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           TVTRALGRMWDLVARDRWIIYSAFSVLVIAA+S
Sbjct: 121 TVTRALGRMWDLVARDRWIIYSAFSVLVIAALS 153

[Close]

BLAST of Lsi04G005870 vs. NCBI nr
Match: gi|449435410|ref|XP_004135488.1| (PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 6.8e-73
Identity = 138/153 (90.20%), Postives = 145/153 (94.77%), Query Frame = 1


Query: 1   MSSFICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPPKSAIN 60
           MSSFICNIQVP PNLLL RQLHVDKIRSRGL FT++K+LRWNH SI+CRFLLPP KSAIN
Sbjct: 1   MSSFICNIQVPHPNLLLLRQLHVDKIRSRGLTFTDNKILRWNHLSIDCRFLLPPLKSAIN 60

Query: 61  GYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVRISVEPV 120
           GYGISVPSSSEEREE  GEAEFDIVDKL GLLG+LRSILPGGSWWSLSDEAEVRISVEPV
Sbjct: 61  GYGISVPSSSEEREESRGEAEFDIVDKLRGLLGHLRSILPGGSWWSLSDEAEVRISVEPV 120

Query: 121 TVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           TVTRALGRMWDLV+RDRWIIYSAFSVLVIAA+S
Sbjct: 121 TVTRALGRMWDLVSRDRWIIYSAFSVLVIAALS 153

[Close]

BLAST of Lsi04G005870 vs. NCBI nr
Match: gi|657994828|ref|XP_008389728.1| (PREDICTED: ABC transporter B family member 26, chloroplastic [Malus domestica])

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 1


Query: 35  NDKVLRWNHFSINCRFLLPPPKS-AINGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLG 94
           N ++    H S + RF   PPKS ++NGY     +++EE + G  EA+  + +KL  L  
Sbjct: 48  NPRLSLSTHSSNSTRFHFSPPKSTSVNGY-----ATTEEYKNGAEEADVQLSEKLRQLFA 107

Query: 95  NLRSILPGGSWWSLSDEAEVRISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
            LRSILPGG+WWS SDEA++RI  +PVTV RAL RMW LVARDRW+I++AFS L++AA+S
Sbjct: 108 FLRSILPGGTWWSFSDEADIRIFAKPVTVARALTRMWGLVARDRWVIFAAFSALIVAALS 162

[Close]

BLAST of Lsi04G005870 vs. NCBI nr
Match: gi|596276091|ref|XP_007225181.1| (hypothetical protein PRUPE_ppa002192mg [Prunus persica])

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-25
Identity = 70/159 (44.03%), Postives = 99/159 (62.26%), Query Frame = 1


Query: 5   ICNIQVP--------RPNLLLSRQ-LHVDKIRSRGLPFTNDKVLRWNHFSINCRFLLPPP 64
           +CN+  P        +P +LL+ Q LH     S     T  ++    H+S + RF   PP
Sbjct: 5   LCNLHAPLLSSFHHKQPLILLTPQKLH--HFTSATRTSTKPRLSLSPHYSNSRRFRFSPP 64

Query: 65  KS-AINGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVR 124
           KS +INGY      ++EE +    E E +++++L  L   LRSILPGG+WWS SDEA++R
Sbjct: 65  KSTSINGY------AAEEYKNDPRETEVELLERLRRLFAFLRSILPGGTWWSFSDEAQIR 124

Query: 125 ISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           I  +PVTV RAL RMW LV+RDRW+I++AFS L++AA+S
Sbjct: 125 IFAKPVTVVRALTRMWGLVSRDRWVIFAAFSALIVAALS 155

[Close]

BLAST of Lsi04G005870 vs. NCBI nr
Match: gi|703113490|ref|XP_010100399.1| (ABC transporter B family member 26 [Morus notabilis])

HSP 1 Score: 120.6 bits (301), Expect = 2.6e-24
Identity = 73/159 (45.91%), Postives = 97/159 (61.01%), Query Frame = 1


Query: 5   ICNIQVPRPNLLLSRQLHVDKIRSRGLPFTNDKVLRWN---------HFSINCRFLLPPP 64
           +CN Q PR    L+ +  + +   + L FT+   LR +         H S + R    P 
Sbjct: 5   LCNTQ-PRLLSSLNHRRTLIRTHHKNLHFTSASKLRPSLSLSPFQSLHLSNSRRVPSLPL 64

Query: 65  KSA-INGYGISVPSSSEEREEGHGEAEFDIVDKLWGLLGNLRSILPGGSWWSLSDEAEVR 124
           KSA INGY  SV   +EE  +  GEAE D+ ++L   +  +RSILPGGSWW  S++ EVR
Sbjct: 65  KSASINGY--SVHDGAEEYVKSRGEAEVDLSERLRRWMAFVRSILPGGSWWGFSEDVEVR 124

Query: 125 ISVEPVTVTRALGRMWDLVARDRWIIYSAFSVLVIAAVS 154
           I  EPVTV+RAL RMW LVA DRWII++AFS L++AA+S
Sbjct: 125 ILAEPVTVSRALVRMWQLVANDRWIIFAAFSTLIVAALS 160

The following BLAST results are available for this feature:

BLAST of Lsi04G005870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
AB26B_ARATH	3.5e-21	42.75	ABC transporter B family member 26, chloroplastic OS=Arabidopsis thaliana GN=ABC...	[more]

BLAST of Lsi04G005870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KVH9_CUCSA	4.7e-73	90.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G598690 PE=4 SV=1	[more]
M5Y3M4_PRUPE	4.8e-25	44.03	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002192mg PE=4 SV=1	[more]
W9RCR2_9ROSA	1.8e-24	45.91	ABC transporter B family member 26 OS=Morus notabilis GN=L484_027710 PE=4 SV=1	[more]
A0A097P9P2_HEVBR	4.2e-21	40.51	ABC transporter family protein OS=Hevea brasiliensis GN=ABCB26 PE=2 SV=1	[more]
I1J538_SOYBN	1.2e-20	52.94	Uncharacterized protein OS=Glycine max GN=GLYMA_01G026000 PE=4 SV=1	[more]

BLAST of Lsi04G005870 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70610.1	2.0e-22	42.75	transporter associated with antigen processing protein 1	[more]

BLAST of Lsi04G005870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090721\|ref\|XP_008446165.1\|	1.8e-73	90.85	PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis...	[more]
gi\|449435410\|ref\|XP_004135488.1\|	6.8e-73	90.20	PREDICTED: ABC transporter B family member 26, chloroplastic isoform X1 [Cucumis...	[more]
gi\|657994828\|ref\|XP_008389728.1\|	6.9e-25	51.67	PREDICTED: ABC transporter B family member 26, chloroplastic [Malus domestica]	[more]
gi\|596276091\|ref\|XP_007225181.1\|	6.9e-25	44.03	hypothetical protein PRUPE_ppa002192mg [Prunus persica]	[more]
gi\|703113490\|ref\|XP_010100399.1\|	2.6e-24	45.91	ABC transporter B family member 26 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0055072	iron ion homeostasis
biological_process	GO:0010039	response to iron ion
biological_process	GO:0000302	response to reactive oxygen species
biological_process	GO:0008152	metabolic process
biological_process	GO:0044763	single-organism cellular process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009941	chloroplast envelope
molecular_function	GO:0042626	ATPase activity, coupled to transmembrane movement of substances
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005215	transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G005870.1	Lsi04G005870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR24221	FAMILY NOT NAMED	coord: 93..153 score: 1.3
None	No IPR available	PANTHER	PTHR24221:SF220	SUBFAMILY NOT NAMED	coord: 93..153 score: 1.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G005870	Csa5G598690	Cucumber (Chinese Long) v2	culsiB368
Lsi04G005870	CSPI05G22300	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G005870	CmaCh18G007710	Cucurbita maxima (Rimu)	cmalsiB383
Lsi04G005870	CmoCh18G007760	Cucurbita moschata (Rifu)	cmolsiB368
Lsi04G005870	MELO3C011954	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G005870	ClCG05G025720	Watermelon (Charleston Gray)	lsiwcgB283
Lsi04G005870	MELO3C011954.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G005870	Cla97C05G107940	Watermelon (97103) v2	lsiwmbB284
Lsi04G005870	Bhi07G001430	Wax gourd	lsiwgoB380
Lsi04G005870	Cp4.1LG09g05120	Cucurbita pepo (Zucchini)	cpelsiB030
Lsi04G005870	CsGy5G021770	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G005870	CsaV3_5G031160	Cucumber (Chinese Long) v3	cuclsiB393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G005870	Watermelon (97103) v2	lsiwmbB305
Lsi04G005870	Wax gourd	lsiwgoB357
Lsi04G005870	Wax gourd	lsiwgoB376
Lsi04G005870	Bottle gourd (USVL1VR-Ls)	lsilsiB097
Lsi04G005870	Bottle gourd (USVL1VR-Ls)	lsilsiB149
Lsi04G005870	Cucumber (Gy14) v1	cgylsiB119
Lsi04G005870	Cucumber (Gy14) v1	cgylsiB465
Lsi04G005870	Cucumber (Gy14) v1	cgylsiB636
Lsi04G005870	Cucurbita maxima (Rimu)	cmalsiB170
Lsi04G005870	Cucurbita maxima (Rimu)	cmalsiB381
Lsi04G005870	Cucurbita maxima (Rimu)	cmalsiB670
Lsi04G005870	Cucurbita maxima (Rimu)	cmalsiB726
Lsi04G005870	Cucurbita moschata (Rifu)	cmolsiB162
Lsi04G005870	Cucurbita moschata (Rifu)	cmolsiB661
Lsi04G005870	Cucurbita moschata (Rifu)	cmolsiB716
Lsi04G005870	Cucurbita pepo (Zucchini)	cpelsiB089
Lsi04G005870	Cucurbita pepo (Zucchini)	cpelsiB353
Lsi04G005870	Cucurbita pepo (Zucchini)	cpelsiB673
Lsi04G005870	Wild cucumber (PI 183967)	cpilsiB050
Lsi04G005870	Wild cucumber (PI 183967)	cpilsiB116
Lsi04G005870	Cucumber (Chinese Long) v2	culsiB119
Lsi04G005870	Melon (DHL92) v3.5.1	lsimeB289
Lsi04G005870	Melon (DHL92) v3.5.1	lsimeB303
Lsi04G005870	Watermelon (Charleston Gray)	lsiwcgB308
Lsi04G005870	Watermelon (97103) v1	lsiwmB296
Lsi04G005870	Watermelon (97103) v1	lsiwmB312
Lsi04G005870	Cucumber (Gy14) v2	cgyblsiB047
Lsi04G005870	Cucumber (Gy14) v2	cgyblsiB105
Lsi04G005870	Melon (DHL92) v3.6.1	lsimedB303
Lsi04G005870	Melon (DHL92) v3.6.1	lsimedB317
Lsi04G005870	Silver-seed gourd	carlsiB218
Lsi04G005870	Silver-seed gourd	carlsiB453
Lsi04G005870	Silver-seed gourd	carlsiB566
Lsi04G005870	Silver-seed gourd	carlsiB661
Lsi04G005870	Cucumber (Chinese Long) v3	cuclsiB057
Lsi04G005870	Cucumber (Chinese Long) v3	cuclsiB131