Lsi04G005270 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G005270
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 4876114 .. 4879483 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTGTTGATTGAAGTACCTCAAAATTCCTTCGTCTAAATGGATAAATCTCTTGTGATTTTTCTCCCTTTTCTTTTCTTTTTCTTTTTCTTCTTTATATCATTTCTATATATTAACAATTTAATTTTCTAATTCACACAATTATTGTTATTTTCCATACTTTATTTTAAGAGAAATTATTATAAAGAGAAAAAAATATCAAAATATTTATAAATATAGAAAATTTTTATTATCTATTAGCGACAGAATTTTATCGCGGTTATCACTAATAAACAGTAAAATTTTTATATATTTGTAAATAGTTTGGCTCAATTTTTATATTTAAAAACAGTCCTTATTTTAGGGTCTTTTTTAAACTTTGAGAGTAATTTTTTTAAAAAATAAATGTAGTTAATGAGCTAGAACACAACTTGAATCCATTATGGAGACTTGACTTATTATTTCATAGACTAATATATACTTTCTATAGTTGGATTTTTTAGTTAGTTGGAGGGTTACCAAAAATAGAATAAGATCATATGCATAACTTAGTACTAAAATTTACTAGGTATATACTACACATAGAGATTGACTTACCACAGACTTGTTTCTATTATTATATAATTTCAATGATACCAAAGATTTATAATAACGATTCATTTATTTACAATAGTATACATATAACACACCAGAAGTTAATAAATTTCATCAATTTAAAAATATAAATAGGATTTAAAAAATAAAAATAACTATGAAAATTTTAAAGAGAGTGTGGAAAATGTGGTAGGTTTGTATTAAAAAAGGTTAAAAAAATAATTTTGGTCTCTAAACTTTCATGAAAGTAACAATTTAGTGCCTGAACTTTGGTTTGTAATGATTTAATCTCTATACTTTTAATTTTGTAACAATTTAGTCCCTGAAATTTAGTAGGTAAAAATTTAGTCATTGTACTATTCAAATTTGTAATAATTTAGTCCCTAATGTTAAAAGAATTCATCAAAATTAGATGTCAATTTCTATTATTTCATGATGTAGACTTTATATTATATAATAATATTGAATCTCTAATTTTGTTTATCGGTTTATTTATGCAAAAAGTCTCATTAAATCTTAACAATAATTTCTACAATGTGGACTAAATTGTTACCGAGTAAAATTAAGGGACTAAATTGTTACAAAATTAAAAGTACAGGAATTAAATCGTTACAAACTAAAGTTAAGAGACTAAATTGTTACTTTATAAAAGTTTATGGACTAAAGGTGATTTTTAACTTAAAAAAATAAGGTTAAAAATAATTTTTGATCTCTAAACTTTCTTAAAGTAACGATTAATTTTTTTTTATAATTAGATCTATGTACTTTCAAATTTGCAATAATTTAATTTTGTTTCTTTTATGGGATAATTAAGATAAGTAAGGGATAATATCTTCTTTTTTTAGTTAAATCTGTGTTTCAGTTCCTAATCTTTAGGTATATGTTCGTATTGGTTAAAAAGTTTCATAATTTAACTCTTATGTAATAATACATTTCAATTTAGTCCCTCATGGTTGGTGATTGTCAAATTTGGTTGATGATAAATTTATATAACATCATACTTAATAAATTAACGAAAATTTTGAAGAGTAAAAAAAAGGTCATATATAAATAGTGTAAAAAATAATAATTTGGCCAATTTTTACGGTTTTGGAAAATGAACCAGAAACTTTCATAATTTCATCAAATATATTTAGTTAATGATATAAAAAGTTAAGATTAAATTACAAGTTTAGTTGTATAAATTTCATAAACGTTAAAAAAAAAAAAAGTGTCTAATAGTAGATTTATGAACTTATAACTCCATCTTTAAATTCTTAAATATTTTGATATAAAATTCAAATGTTAAGATCTTATTTGTTATAAAATATTATAATGAGGTACAAGCATTTCTAAGTGTTGTTATGATGAATAACTTCATCAATATCTTGTAGGGTTACAACAGTCGAAAATTTATCGTGCGCATAATATTTTTGTTGATGTGACCAAAATTCTATCTATGTGATGTCTACTTGTACTCCTAGTGATGACCAAGAAAGTTAGAGAGAAGAAAATGAAGGGTTGCGACATGTTGCAAACTAAGGAGAAACACTGGGTTTGGGGACTATGAACTCGTGAACCTCATCCATGCTTTAGCTAAAATGCATACTCAGTATGCAAGTCCCTAGCCGTACAGATGTACCGTGTAAAGATTGTTATCTGGCATTATCTGGGTTGACGGGCAAAATGTGACATCCATCTGGACCTAAATCGTGGATCAAGTATGCAATTTACCCTAAACCGCACACCCAATCCACGATTCATTTGATTACACGTAGACCCAATACATGATTTCCTGAAAATGTGTACCCAGTCCACAATTAAACAACTACAAATTTGACATCATTTTCCTATCAACCCTATTTTTGTTATTTTATTAATTAAATAACATTGTTTAAGAAAATCACACAAGTTTTTATGAACTAATTAAAAAGTTGGTAGGAACATAATAGGCACAAGAAATTTAAAAAAAAAAAAAAATTTAAAAAACGTTTAATTTAAAACCTTGATACTTGAGGTTGTTTGGAAATGATTCCAATTCTATTCTCATTGTTAGCGAATTCCTATTCCACACGCGAGCAGAATCCAAATTTAAACCACGTCGGTGGATACCCAAAGCCATGTCCCAAACAGATTACCAAACACCGACCCATCGGCCATCGTTTCTCCTTCTGGAAGCTGCTAACATTTTCACACCTGGGGCTTCGCCACTGAACCAAACCACTTGATTTGATTTCTGTGCCATTTTTTAGCCATTCCATTGAAGCCAACACCAACAACTCATACTTCGGTACTCTTCTAAAACCTTCAATCAACAATCCAATTTCCTTTCCCCAATCACCCATTTCCCCCTTCTTCCTCACTCTTCTGTTTCCCATATCGTTGTTCCAATGCTATGGCCTTCAGCCACCGCAATCGCTCTTCAACTCAGGGATTCTATCGAAACTCCCAGAATCATATGGCTCATGCAGTTCCAGTTCCATTTCTAGTCGATTTCCCGATGACCCAGGTAGGTAAATTGCAATCTTGACCTTGCCAGTTGCGGGGGCTCTTCATTTATTTTGAAATTCCAAGCTTCCTCGTTCCAGTTTGACCATGAATTGAAGTTTAGGCGTTTTGGGTTGTGAGGATTCTCTGTCTGTAGTCTAGCATTTTTTATTCTTGCTGTAATTTTATAGTTCAGGGTTTTGATTTTCATTACCCACATATGAATTGGCTTTCTTGTCAGTGCAATATATATATAGCTTGTCAATTGCTTGTTTGCCTCAATGCAAGAAGTGCTTTGGCTTAGAGGAAAACGAGGCAGAAGACAACTGA

mRNA sequence

ATGGCGAATTCCTATTCCACACGCGAGCAGAATCCAAATTTAAACCACGTCGGTGGATACCCAAAGCCATGTCCCAAACAGATTACCAAACACCGACCCATCGGCCATCCCAACACCAACAACTCATACTTCGGTACTCTTCTAAAACCTTCAATCAACAATCCAATTTCCTTTCCCCAATCACCCATTTCCCCCTTCTTCCTCACTCTTCTGTTTCCCATATCGTTGTTCCAATGCTATGGCCTTCAGCCACCGCAATCGCTCTTCAACTCAGGGATTCTATCGAAACTCCCAGAATCATATGGCTCATGCAGTTCCAGTTCCATTTCTAGTCGATTTCCCGATGACCCAGGTAGCTTGTCAATTGCTTGTTTGCCTCAATGCAAGAAGTGCTTTGGCTTAGAGGAAAACGAGGCAGAAGACAACTGA

Coding sequence (CDS)

ATGGCGAATTCCTATTCCACACGCGAGCAGAATCCAAATTTAAACCACGTCGGTGGATACCCAAAGCCATGTCCCAAACAGATTACCAAACACCGACCCATCGGCCATCCCAACACCAACAACTCATACTTCGGTACTCTTCTAAAACCTTCAATCAACAATCCAATTTCCTTTCCCCAATCACCCATTTCCCCCTTCTTCCTCACTCTTCTGTTTCCCATATCGTTGTTCCAATGCTATGGCCTTCAGCCACCGCAATCGCTCTTCAACTCAGGGATTCTATCGAAACTCCCAGAATCATATGGCTCATGCAGTTCCAGTTCCATTTCTAGTCGATTTCCCGATGACCCAGGTAGCTTGTCAATTGCTTGTTTGCCTCAATGCAAGAAGTGCTTTGGCTTAGAGGAAAACGAGGCAGAAGACAACTGA

Protein sequence

MANSYSTREQNPNLNHVGGYPKPCPKQITKHRPIGHPNTNNSYFGTLLKPSINNPISFPQSPISPFFLTLLFPISLFQCYGLQPPQSLFNSGILSKLPESYGSCSSSSISSRFPDDPGSLSIACLPQCKKCFGLEENEAEDN
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G005270.1Lsi04G005270.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G005270Cucurbita maxima (Rimu)cmalsiB681
Lsi04G005270Cucurbita maxima (Rimu)cmalsiB726
Lsi04G005270Cucurbita moschata (Rifu)cmolsiB674
Lsi04G005270Cucurbita moschata (Rifu)cmolsiB716
Lsi04G005270Cucurbita pepo (Zucchini)cpelsiB089
Lsi04G005270Cucurbita pepo (Zucchini)cpelsiB363
Lsi04G005270Wild cucumber (PI 183967)cpilsiB050
Lsi04G005270Wild cucumber (PI 183967)cpilsiB193
Lsi04G005270Wild cucumber (PI 183967)cpilsiB372
Lsi04G005270Cucumber (Chinese Long) v2culsiB051
Lsi04G005270Cucumber (Chinese Long) v2culsiB368
Lsi04G005270Melon (DHL92) v3.5.1lsimeB281
Lsi04G005270Melon (DHL92) v3.5.1lsimeB289
Lsi04G005270Watermelon (Charleston Gray)lsiwcgB258
Lsi04G005270Watermelon (Charleston Gray)lsiwcgB274
Lsi04G005270Watermelon (Charleston Gray)lsiwcgB283
Lsi04G005270Watermelon (97103) v1lsiwmB312
Lsi04G005270Watermelon (97103) v1lsiwmB323
Lsi04G005270Cucumber (Gy14) v2cgyblsiB047
Lsi04G005270Cucumber (Gy14) v2cgyblsiB052
Lsi04G005270Cucumber (Gy14) v2cgyblsiB179
Lsi04G005270Cucumber (Gy14) v2cgyblsiB337
Lsi04G005270Melon (DHL92) v3.6.1lsimedB297
Lsi04G005270Melon (DHL92) v3.6.1lsimedB303
Lsi04G005270Melon (DHL92) v3.6.1lsimedB308
Lsi04G005270Melon (DHL92) v3.6.1lsimedB327
Lsi04G005270Cucumber (Chinese Long) v3cuclsiB064
Lsi04G005270Cucumber (Chinese Long) v3cuclsiB057
Lsi04G005270Cucumber (Chinese Long) v3cuclsiB212
Lsi04G005270Cucumber (Chinese Long) v3cuclsiB393
Lsi04G005270Watermelon (97103) v2lsiwmbB261
Lsi04G005270Watermelon (97103) v2lsiwmbB284
Lsi04G005270Wax gourdlsiwgoB376
Lsi04G005270Wax gourdlsiwgoB380
Lsi04G005270Wax gourdlsiwgoB392
Lsi04G005270Bottle gourd (USVL1VR-Ls)lsilsiB097
Lsi04G005270Bottle gourd (USVL1VR-Ls)lsilsiB139
Lsi04G005270Cucumber (Gy14) v1cgylsiB119
Lsi04G005270Cucumber (Gy14) v1cgylsiB465
Lsi04G005270Cucumber (Gy14) v1cgylsiB554
Lsi04G005270Cucurbita maxima (Rimu)cmalsiB381