Lsi04G004590 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G004590
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Potassium voltage-gated channel subfamily H member 1
Location	chr04 : 4356328 .. 4360911 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGTGACGAGGATTTGGATAAGAACCATATTCCATCCATCGGCTTCTTCGTTTGCTTTTGTTCTCATCTTCGTTTTGAGGGAGAATGATTTCATATTACAGAATTAAAAAAATACCTCATTCTTCATCTACGTGGTCACTCTCTGACACAATGATTGGGACTTCCATCGGCGGACCCTCTCCAATTCCTTGATTTTTCGGTAAATCTGCCGCAACCTACCAACAAAATTACAACCCCATCTTCATGATTTACATTGTCGTGATCTTTTTGGTATAATCACAAGTTTAAAACAATGGGGTAATCATTTTTTTCCTTTAATCTTTTGTGGCCAAAGGAGGGGGTAATTTCAACCAGAAATATCGTGCCACGAATTTGTGAACAGCCTTTGTTCTGCTTTCGTTTTCATTTTCCAATCACGACGCCTCGATAGGGGATTTTGTTTCTCAATCAATTTCATTTCAATTTTCTCATCGCATCGAAAAATGGGTAGTTGCGAAGAAATTTTGTTGATCACAATCTACGCGATATTTTCTCTTCTTATTCACAGTAATACGGCGAACACCTGTAGTTGTTAAGTGTACTCTGCCAGTGAGGAGCCCTCTCGGATTCTTTGATATGGATTCATTATAGGGTCTTTGTTTGTTTTCCTCCTTGGTTTTATATATTGCAGTTCAAAGCTTCTTCAAGAGACTGAACCCGCGGTTTGAGTGCCACATGGGATTGGGACTAATCCGAATATTGAGGAAGAAACGAGATTCCGTCCAACAAGTTGAAGAACCAGGAGGATGGAATTGCCACTGGGTTTGATTGAACAATCACTTAACAGTCGCTATTCTCTCTGGGTCCGTGAAGCTCTTAAAGATTTGTCGGATAATTTTACAATCACTGATCCCAGTATAGCGGGTCACCCAATTGTGTTCGTGAGCCCTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGCAAAAATGGGAGGATGTTTCAGGGCCCAGAAACTAGTAGGAGTTCAATAATGCAAATTCGTGAGGCAGTTCGGGAAGAGAAGGGGATTCAAATTAATTTACTAAATTATCGCAAAGATGGGACACCATTCTGGGTTTTTTTCCAAATGACCCCTGTTTTCAGCGAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATTAGGAAGAATTCAAGGAAATCTAGATGTGGGTTTGTAAGAATTCAAGGTGTCTCATATGAGAATGAATTTAGAGCGTGCAAAAATCTTTTAAGGTCCTGTCGCCAGGAGTTGTTGTCTGATTCTATCTCGGAACTAGATTGTCTTTTGAATAGAGATTCACCACCGGATTCCGATAGTAGAGGTCTGTTTCTACATTATGCATCAAGCCATTTACTGTTTGCTCGTGTTGAGATCTTGAAGCTAACTTGATTCATTGTTTTCTCAAAGTACTGCTTGAACTTCCATCCATTTCTCTCATTCACTTTCTTTTTACCTTTCTCGTTCTGTTGTCATTTAGTAATACTTTAACATTTTTTTTAACACAGATTCCATATTCATTTTGAGGCAAAAATACAAGTTTATGGTCTGCTACCATTGTTCATTCAGAGCTTTAGACACCTTTCCACTAGTTGTTATTTAATTTTTGGTTTTATCTTTGTTTATAATATTGGTCATTGAGTTTCTACTAAGTGGATATCTCATAGGAGTAGAGATTGAAGAACCATGTGAAGCATGTGATGATGAGAAGCAAAGGGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACGGGCAGATTGGTGTGCGAAAGGAGATGCAGCTTGCCTAGGGTGGGCATTCTTTATTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTGTGAGTTATTACTTATTCTTTGACTATTACTTCTGTTTATGCTTAAAGCTGACGCTTTATGAGTGAATAAGTTATCCTTTTCAATTTTGGTTTCATGCATGTCTCTGCTGCTTTGCAGAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGTGAGTGACGAGTTTTTGAAATTAACAGGTGCTAAAAATTGATGCAACTATATAGCGCTTGAGATTTTGATACTGAAAGATACTGATTGAACAATACATTGCAATTGTTCTCTTGCCTGCGATAGGTTATACTAGATGTGAAGTTCTTGGGCGCAACTGTAGATTCTTAAGTGGAACTGACACGGATTCTTCAACCCTTTTTAAGGTAGTGCATTTCCTAGTTCAACAAGCATTTTTCATCCGACTTTCTAACGAGTTAATTGGAGGTGTGGGGGAGCTTGTAGAAATAATTGTTATGAATCTCGTTTTCTTTACCAGATAAAGGAAAGCCTTCAGTCTGAACAAGCTTGCACTGTACGGATTTTAAATTACAGGTTGATATTATCTACAACATTTTATACAAAGCGTAATTTGTAGACTTCAGAATGAAAGAAGACTTCTAACTGCTCTTACCACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGTAATGCTTCTGGCAAGGTATTGTTGTTTTCTTTAGTTTACTAGATTGATTGAAATTTTGGGATTCTCTAGTTTTACCAATGTCCACGTTTTCTAAATTGAATTAAAAATTTTGTGGGTATAAGATAACCAGATAAATTTCCCTTTACCAAGTGGAGCAAGGATAATGGGCAAGTGTTCAAGTCAACATAAGAGTTTAAAGAACTCTTATGTACTTTAGCTTAAGAATAGAGGCAGAGGCAGCATTTTTCTACAAGTCACTCCCTTCCCATACTAGTTAGTGCATTGTGCTCGATCAACATTCTAAGACGAGAACTGTTATACTCGGACCTTTTGCATTTAGCTTCAAATTCAGAGGTTGATAAGGTTCTGTTGTTGAGTGTAATTTTTCTACTTTTATTTTCAGAAATGTTTTCAAGTGCTGCTTTGGATGATTCATATAGATTAAAGTTATTTTAAAGATAAAGATTACTGTGCTGCGTTTGAAAGCACGATTTACAAGCCGTGACTTAGGACAGAACAAAACCTCAAAGAGAAAAAAGAAAAATCAAGAATAATTATCAAAACTTGCTTTCATTTATGTTTCTTTGCTCCATTATTTAATCAATGTGTATAACAAGAAGTGTAGTAATACCCACCATTATTACTTTTTGACATTTCATAGCTGAATCCACCAAGAAAGTTGTTGCTATTTCCTTACCAAAGAAAAGGCATTGTTTGCAGGTAGCATATTTTGTGGGCGTCCAGATGGATGAAGATGATAAAAAGCAGGACGAACATGGGTTGAACCCTAAGATGAAGCAACTTAGCACTGTGGCTGCAGTCAGGGTGGCCGTGAGGAGCTGGTCGATGACTGTGGGCTGTTCACAGTGCTAGCCCCTTTTCCACGTTTTGAGTAGTAATTCTAAATTTTCTCTGTAATTACATCTTCTGAAGAGGTATATAAGATAAGTAGATGTTCTTAACGTTATTGTAAAGCTCACATTTTTCTCATATATGGAATGGAAAGTGTGTCCATTTAAGTTGAAACAATGGATCACATTCTTTTTATTTATGTAGTTAGAATCAATATCAGGTTCGACATCTGAACTGGTATATTATTATTTAGAGTATGTTAGTGGTTGTGTTTATAATTTAACTTATTAGTATGAGGGAATGTATTGTACTCACTGCGCATGCAAATACTCGTACGTACTTTGTTGTCCAAATGGTTTACCTGTCCTTTGTTTAAACCTGTTAGATGAACTTTAGATTGTTGTATATTCGTAAACTGATTAAAATTAATTATTATTTATTTGGTGTTTTTAAGTTGGCTTTGATTAGGTCATTGTTATTTTAATTATTATTATTATTATTTGTTTTTTTTAAGAAACCGAGCTTTCATGTAGAGAAGTAAAATATTATATAAGAGCATACAAAAAAACTAGTCCCAAAAAAACACATAAACAACATAAAGGGACTCGATTCCAACAAAATCAAACTATGATCATAGTTACATAAATACCTAGTGACCGATGTCCACAAGGAGGCATTAAACCTCACTACCTCCCAAACCTCGACACATGAACTCTAAAGATCTTATTGTTCCTTTCAAGCCAAGCACCCCACAAAATAGTGAAAAAATACTAGCTTGACACACAAAAGAAAAAATCATTTCACAAAAATATGAACTCAAAAACATCTCTTCAATAATAGCGTAGCCATCGCCATTCCAATGCAAAGATAAGCCAACGGTCTCAAATCAACAAAGTCAGAAAGACTGGACAAACTGACATTGCCAGAAAGTGATGCAAGTCTTATGCATGACATGTGTAAATAGAGGTAGATATAGAAGCATTAAATTTCAGTTAAGTCATTGTGAACCATCACTATTGATTAGGTCATTGTGAACCTAACCGAATTTCGGTTCATAAGTTTTTCTAATTCAAATGACTCTCCAGGAAGTGGCTCCATGCCTCTTGAAGGTGCAGACTGTGACTCTGAGCTTTCAGACAAATCCATGTACTGA

mRNA sequence

AATGTGACGAGGATTTGGATAAGAACCATATTCCATCCATCGGCTTCTTCGTTTGCTTTTGTTCTCATCTTCGTTTTGAGGGAGAATGATTTCATATTACAGAATTAAAAAAATACCTCATTCTTCATCTACGTGGTCACTCTCTGACACAATGATTGGGACTTCCATCGGCGGACCCTCTCCAATTCCTTGATTTTTCGGTAAATCTGCCGCAACCTACCAACAAAATTACAACCCCATCTTCATGATTTACATTGTCGTGATCTTTTTGGTATAATCACAAGTTTAAAACAATGGGGTAATCATTTTTTTCCTTTAATCTTTTGTGGCCAAAGGAGGGGGTAATTTCAACCAGAAATATCGTGCCACGAATTTGTGAACAGCCTTTGTTCTGCTTTCGTTTTCATTTTCCAATCACGACGCCTCGATAGGGGATTTTGTTTCTCAATCAATTTCATTTCAATTTTCTCATCGCATCGAAAAATGGGTAGTTGCGAAGAAATTTTGTTGATCACAATCTACGCGATATTTTCTCTTCTTATTCACAGTAATACGGCGAACACCTGTAGTTGTTAAGTGTACTCTGCCAGTGAGGAGCCCTCTCGGATTCTTTGATATGGATTCATTATAGGGTCTTTGTTTGTTTTCCTCCTTGGTTTTATATATTGCAGTTCAAAGCTTCTTCAAGAGACTGAACCCGCGGTTTGAGTGCCACATGGGATTGGGACTAATCCGAATATTGAGGAAGAAACGAGATTCCGTCCAACAAGTTGAAGAACCAGGAGGATGGAATTGCCACTGGGTTTGATTGAACAATCACTTAACAGTCGCTATTCTCTCTGGGTCCGTGAAGCTCTTAAAGATTTGTCGGATAATTTTACAATCACTGATCCCAGTATAGCGGGTCACCCAATTGTGTTCGTGAGCCCTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGCAAAAATGGGAGGATGTTTCAGGGCCCAGAAACTAGTAGGAGTTCAATAATGCAAATTCGTGAGGCAGTTCGGGAAGAGAAGGGGATTCAAATTAATTTACTAAATTATCGCAAAGATGGGACACCATTCTGGGTTTTTTTCCAAATGACCCCTGTTTTCAGCGAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATTAGGAAGAATTCAAGGAAATCTAGATGTGGGTTTGTAAGAATTCAAGGTGTCTCATATGAGAATGAATTTAGAGCGTGCAAAAATCTTTTAAGGTCCTGTCGCCAGGAGTTGTTGTCTGATTCTATCTCGGAACTAGATTGTCTTTTGAATAGAGATTCACCACCGGATTCCGATAGTAGAGGAGTAGAGATTGAAGAACCATGTGAAGCATGTGATGATGAGAAGCAAAGGGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACGGGCAGATTGGTGTGCGAAAGGAGATGCAGCTTGCCTAGGGTGGGCATTCTTTATTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGTGAGTGACGAGTTTTTGAAATTAACAGGTTATACTAGATGTGAAGTTCTTGGGCGCAACTGTAGATTCTTAAGTGGAACTGACACGGATTCTTCAACCCTTTTTAAGATAAAGGAAAGCCTTCAGTCTGAACAAGCTTGCACTGTACGGATTTTAAATTACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGTAATGCTTCTGGCAAGGTAGCATATTTTGTGGGCGTCCAGATGGATGAAGATGATAAAAAGCAGGACGAACATGGGTTGAACCCTAAGATGAAGCAACTTAGCACTGTGGCTGCAGTCAGGGTGGCCGTCATTGTGAACCTAACCGAATTTCGGTTCATAAGTTTTTCTAATTCAAATGACTCTCCAGGAAGTGGCTCCATGCCTCTTGAAGGTGCAGACTGTGACTCTGAGCTTTCAGACAAATCCATGTACTGA

Coding sequence (CDS)

ATGGAATTGCCACTGGGTTTGATTGAACAATCACTTAACAGTCGCTATTCTCTCTGGGTCCGTGAAGCTCTTAAAGATTTGTCGGATAATTTTACAATCACTGATCCCAGTATAGCGGGTCACCCAATTGTGTTCGTGAGCCCTGGATTCTTGAAGATGACTGGATATACCAAAGAAGAGGTGATTGGCAAAAATGGGAGGATGTTTCAGGGCCCAGAAACTAGTAGGAGTTCAATAATGCAAATTCGTGAGGCAGTTCGGGAAGAGAAGGGGATTCAAATTAATTTACTAAATTATCGCAAAGATGGGACACCATTCTGGGTTTTTTTCCAAATGACCCCTGTTTTCAGCGAGGAAGATGGGCGGATCATTCACTTTGTGGGTGTTCAGGTGCCGATTAGGAAGAATTCAAGGAAATCTAGATGTGGGTTTGTAAGAATTCAAGGTGTCTCATATGAGAATGAATTTAGAGCGTGCAAAAATCTTTTAAGGTCCTGTCGCCAGGAGTTGTTGTCTGATTCTATCTCGGAACTAGATTGTCTTTTGAATAGAGATTCACCACCGGATTCCGATAGTAGAGGAGTAGAGATTGAAGAACCATGTGAAGCATGTGATGATGAGAAGCAAAGGGCTGCAATTGCTATTAGTAACATCTTATCTGTCCTAACTCATCACAGTGAGGTAACGGGCAGATTGGTGTGCGAAAGGAGATGCAGCTTGCCTAGGGTGGGCATTCTTTATTCATCCTTGAATACATCTCTTAATAGAATTAAACAGAGCTTTGTATTAACCGATCCGAACTTACCAGACATGCCTATAGTTTATGTGAGTGACGAGTTTTTGAAATTAACAGGTTATACTAGATGTGAAGTTCTTGGGCGCAACTGTAGATTCTTAAGTGGAACTGACACGGATTCTTCAACCCTTTTTAAGATAAAGGAAAGCCTTCAGTCTGAACAAGCTTGCACTGTACGGATTTTAAATTACAGGAAAAATAAGAGCTCATTTTGGAATGATCTCCACATATCACCTGTTCGTAATGCTTCTGGCAAGGTAGCATATTTTGTGGGCGTCCAGATGGATGAAGATGATAAAAAGCAGGACGAACATGGGTTGAACCCTAAGATGAAGCAACTTAGCACTGTGGCTGCAGTCAGGGTGGCCGTCATTGTGAACCTAACCGAATTTCGGTTCATAAGTTTTTCTAATTCAAATGACTCTCCAGGAAGTGGCTCCATGCCTCTTGAAGGTGCAGACTGTGACTCTGAGCTTTCAGACAAATCCATGTACTGA

Protein sequence

MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDCLLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSLPRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKKQDEHGLNPKMKQLSTVAAVRVAVIVNLTEFRFISFSNSNDSPGSGSMPLEGADCDSELSDKSMY

Homology

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BLAST of Lsi04G004590 vs. Swiss-Prot
Match: TLOV1_ARATH (Protein TWIN LOV 1 OS=Arabidopsis thaliana GN=TLP1 PE=1 SV=2)

HSP 1 Score: 413.3 bits (1061), Expect = 3.2e-114
Identity = 217/385 (56.36%), Postives = 280/385 (72.73%), Query Frame = 1


Query: 9   EQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL++L  NFTITDP I+GHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVG 128
           FQGP+T+R SIM+IREA+REE+ +Q++LLNYRK G+PFW+ F M PVF ++DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--RKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDCLLNRDS 188
           VQVPI  R++ RK       +  +S +           SCR+E+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKK---LRNVGDLSSDT-----SPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSLPRVGIL 248
             D D +G+E  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  L  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 YSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+Y SD FL LTGY R EVLG+NCRFLSG DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNY--RKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDD 368
           S L+++KE +   Q+CTV+ILNY  RK+KSSFWN LHISPVRNASGK AYFVGVQ++   
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYSNRKDKSSFWNLLHISPVRNASGKTAYFVGVQVEASC 376

Query: 369 KKQDEHGLNPKMKQLSTVAAVRVAV 390
           +  +   L P+ +QLS V AVRVAV
Sbjct: 377 RNTEIKELRPETRQLSVVGAVRVAV 391

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BLAST of Lsi04G004590 vs. Swiss-Prot
Match: PHOT2_ARATH (Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2)

HSP 1 Score: 219.5 bits (558), Expect = 6.9e-56
Identity = 136/415 (32.77%), Postives = 222/415 (53.49%), Query Frame = 1


Query: 15  RYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRMFQGPET 74
           R S  ++ AL  L   F ++D +    PIV+ S GF  MTGY+ +E++G+N R  QGP+T
Sbjct: 119 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 178

Query: 75  SRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVGVQVPIR 134
            ++ + +IR+ V+  K     LLNY+KDGTPFW    +TP+  ++ G  I F+G+QV + 
Sbjct: 179 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPI-KDDQGNTIKFIGMQVEVS 238

Query: 135 KNSRKSRCGFVRIQGVSYENEFRACKNLLR--SCRQELLSDSISEL-DCLLNRDSP---- 194
           K +       +R  G+S        K+L+R  + ++E   DSI+E+   + +R S     
Sbjct: 239 KYTEGVNDKALRPNGLS--------KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQES 298

Query: 195 --------PDSDSR---GVEIEEPCEACDDEKQRAAIAI---SNILSVLTHHSEVTGRLV 254
                   PDS +    G +  +  EA    +    ++    S + S    H ++     
Sbjct: 299 VSNDTMVKPDSSTTPTPGRQTRQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRMEP 358

Query: 255 CERRCSLPRVGILYS--------------SLNTSLNRIKQSFVLTDPNLPDMPIVYVSDE 314
            E   S   +G   S               L T+L RI+++FV++DP LPD PI++ SD 
Sbjct: 359 EELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDS 418

Query: 315 FLKLTGYTRCEVLGRNCRFLSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWND 374
           FL+LT Y+R E+LGRNCRFL G +TD +T+ KI+++++ ++  TV+++NY K+   FWN 
Sbjct: 419 FLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNL 478

Query: 375 LHISPVRNASGKVAYFVGVQMDEDDKKQDEHGLNPKMKQLSTVAAVRVAVIVNLT 395
            H+ P+R+  G++ YF+GVQ+D  D       + P   +LS    ++ + +V  T
Sbjct: 479 FHLQPMRDQKGELQYFIGVQLDGSDH------VEPLQNRLSERTEMQSSKLVKAT 518

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BLAST of Lsi04G004590 vs. Swiss-Prot
Match: PHOT2_ORYSJ (Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.5e-31
Identity = 64/145 (44.14%), Postives = 98/145 (67.59%), Query Frame = 1


Query: 250 LNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDSSTL 309
           L T+L RI+++FV+TDP +PD PI++ SD FL+LT YTR E+LGRNCRFL G +TD  T+
Sbjct: 379 LATTLERIEKNFVITDPRIPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQGTV 438

Query: 310 FKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKKQDE 369
            KI+E+++ ++  TV+++NY K+   FWN  H+ P+R+  G++ YF+GVQ+D  D     
Sbjct: 439 DKIREAIREQKEITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDH---- 498

Query: 370 HGLNPKMKQLSTVAAVRVAVIVNLT 395
             + P   +LS    ++ A +V  T
Sbjct: 499 --VEPLRNRLSENTEIQSAKLVKAT 517

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BLAST of Lsi04G004590 vs. Swiss-Prot
Match: PHT1B_ORYSJ (Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30
Identity = 59/120 (49.17%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 250 LNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDSSTL 309
           L T+L RI+++FV+TDP LPD PI++ SD FL+LT Y R E+LGRNCRFL G +TD +T+
Sbjct: 404 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATV 463

Query: 310 FKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKKQDE 369
            KI++++ ++   TV+++NY K+   FWN  H+ P+R+  G V YF+GVQ+D  +  QD+
Sbjct: 464 RKIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQDD 523

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BLAST of Lsi04G004590 vs. Swiss-Prot
Match: PHT1A_ORYSJ (Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.3e-30
Identity = 59/120 (49.17%), Postives = 88/120 (73.33%), Query Frame = 1


Query: 250 LNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDSSTL 309
           L T+L RI+++FV+TDP LPD PI++ SD FL+LT Y R E+LGRNCRFL G +TD +T+
Sbjct: 404 LATTLERIEKNFVITDPRLPDNPIIFASDSFLQLTEYNREEILGRNCRFLQGPETDRATV 463

Query: 310 FKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDDKKQDE 369
            KI++++ ++   TV+++NY K+   FWN  H+ P+R+  G V YF+GVQ+D  +  QD+
Sbjct: 464 RKIRDAIDNQAEVTVQLINYTKSGKKFWNLFHLQPMRDQKGDVQYFIGVQLDGTEHVQDD 523

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BLAST of Lsi04G004590 vs. TrEMBL
Match: A0A0A0KSK8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604290 PE=4 SV=1)

HSP 1 Score: 721.5 bits (1861), Expect = 6.2e-205
Identity = 358/389 (92.03%), Postives = 370/389 (95.12%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           MELPLGLIEQSLNSRYSLWVREAL DLSDNFTITDP IAGHPIVFVSPGFLKMTGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNDLSDNFTITDPCIAGHPIVFVSPGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNG+MFQGPETSRSS+M IREAVREEK IQINLLNYRKDGTPFWVFFQMTPVFS+ED
Sbjct: 61  VIGKNGKMFQGPETSRSSVMLIREAVREEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           G+IIHFVGVQVPI KNSRKSRCGFVRIQG S+ENEFRACK+ L SCR+EL+SDSISELDC
Sbjct: 121 GQIIHFVGVQVPILKNSRKSRCGFVRIQGDSHENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
            LNRDS PDS+SRGVEIEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCSL
Sbjct: 181 TLNRDSQPDSNSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
           PRVGIL SSLNTSLNRIKQSFVLTDPNLPDMPIVY SDEFLKLTGYTRCEVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLH+SPV NASGK+AYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHVSPVHNASGKLAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           D DDKKQDEHGLNPK KQLSTV AV+VAV
Sbjct: 361 DADDKKQDEHGLNPKTKQLSTVGAVKVAV 389

[Close]

BLAST of Lsi04G004590 vs. TrEMBL
Match: A0A140F7I0_HYDQU (Putative LOV domain-containing protein OS=Hydrangea quercifolia PE=2 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.8e-149
Identity = 265/391 (67.77%), Postives = 319/391 (81.59%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           ME  LGLIEQS N RYSLWVREAL +L DNFTITDPSI+GHPIVF S GFLKM+GY+++E
Sbjct: 1   METQLGLIEQSFNLRYSLWVREALDELPDNFTITDPSISGHPIVFASLGFLKMSGYSRDE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNGR+FQGP T R S+M+IREA+REE+ IQIN+LNYRKDGTPFW+ F M PVF++ED
Sbjct: 61  VIGKNGRVFQGPRTCRRSVMEIREAIREERAIQINILNYRKDGTPFWMLFHMCPVFNKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVS--YENEFRACKNLLRSCRQELLSDSISEL 180
           GR+IHFV VQVPI +  R+S  GF R  GV   ++     C+ L  SCR+E+ SDS+ +L
Sbjct: 121 GRVIHFVAVQVPILRKPRRSGGGFGR-NGVDLCHDRSGGFCETLGGSCRREVHSDSVVQL 180

Query: 181 DCLLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRC 240
            C L  DS   SD RG++++EPCEA D +K++A  A+SNILSVLTH+SE+TGRLVC +RC
Sbjct: 181 GCFLAMDSVLGSDDRGLDVDEPCEATDLDKRKAVTAVSNILSVLTHYSELTGRLVCGKRC 240

Query: 241 SLPRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRF 300
            L  +G+L SSLN SL RIKQSFVLTD +LPDMPIVY SD FLKLTGY R E+LGRNCRF
Sbjct: 241 CLSGMGLLGSSLNISLGRIKQSFVLTDAHLPDMPIVYASDAFLKLTGYARHEILGRNCRF 300

Query: 301 LSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGV 360
           L G DTDSST+F+IKES+++EQ CTVRILNYRK+KS FWN LHISPVRNASGKVAYFVG+
Sbjct: 301 LGGVDTDSSTVFQIKESIRTEQPCTVRILNYRKDKSQFWNFLHISPVRNASGKVAYFVGI 360

Query: 361 QMDEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           Q+DE +K  D++GL P+M+QLS V AV+VAV
Sbjct: 361 QIDESNKNDDKNGLGPEMRQLSVVGAVKVAV 390

[Close]

BLAST of Lsi04G004590 vs. TrEMBL
Match: A0A126X0Q8_STATR (Putative LOV domain-containing protein OS=Staphylea trifolia PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-146
Identity = 264/389 (67.87%), Postives = 314/389 (80.72%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           M+  LGLIEQS N+RYSLWVREAL++  DNFTITDPSI+GHPIVF SPGFLKM+GY+K+E
Sbjct: 1   MDSQLGLIEQSFNTRYSLWVREALEEFPDNFTITDPSISGHPIVFASPGFLKMSGYSKQE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIG+NGRMFQGP T+R S+M+IREA+REE+ IQINLLNYRKDGTPFW+ F M+PVF +ED
Sbjct: 61  VIGQNGRMFQGPRTNRRSVMEIREAIREERTIQINLLNYRKDGTPFWMLFHMSPVFGKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           GR+IHFV VQ PI + SR      +       E+ +     +  SCR+E+ SDS+ EL  
Sbjct: 121 GRVIHFVAVQAPILRKSRGRNLENL------CEDGYGMGDMVYGSCRREVCSDSLVELGR 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
           +L      DSD R +EIEEPCEA + EK+RAA A +NILSVLTH+SE+TG+LVCE+RCSL
Sbjct: 181 VLALKEISDSDCRELEIEEPCEASELEKRRAAAAFNNILSVLTHYSELTGKLVCEKRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
           PR G L SSLN SL RIKQSFVLTDP+LPDMPIVY SD FLKLTGY + EVLG NCRFLS
Sbjct: 241 PRAGCLSSSLNISLGRIKQSFVLTDPHLPDMPIVYASDAFLKLTGYAQHEVLGHNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTD ST ++IKES+QSE+ACTVRILNYRK+KSSFWN LHISPVRNASGK+AY+V VQ+
Sbjct: 301 GVDTDCSTQYRIKESIQSEKACTVRILNYRKDKSSFWNLLHISPVRNASGKIAYYVSVQI 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           +E    QD HGL+P+MKQLS V AV++AV
Sbjct: 361 EEGCPNQDRHGLSPEMKQLSAVGAVKIAV 383

[Close]

BLAST of Lsi04G004590 vs. TrEMBL
Match: A0A126WZ81_9ROSA (Putative LOV domain-containing protein OS=Rosa palustris PE=2 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.0e-146
Identity = 263/391 (67.26%), Postives = 323/391 (82.61%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           ME  LGL+EQS+NSRYSLWV+EAL +L D+FT+TDP I+G PIVF S GFLKM GY+K E
Sbjct: 1   MESELGLLEQSINSRYSLWVQEALNELPDSFTVTDPYISGQPIVFASKGFLKMMGYSKTE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIG+NGR+FQGP T R S+M+IREA+REE+GIQINL+NYR+DGTPFW+ F M PVF++ED
Sbjct: 61  VIGRNGRIFQGPGTCRRSVMEIREAIREERGIQINLVNYRRDGTPFWMLFHMCPVFNKED 120

Query: 121 GRIIHFVGVQVPI-RKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELD 180
           GR+IHFVG+QVPI RK  R++  G V      YE E R  +++  SCR+E+ SDS+ +L 
Sbjct: 121 GRVIHFVGIQVPILRKPRRRNGVGLV------YEEESRVNESVYGSCRREVCSDSLVDLG 180

Query: 181 CLLNRDSP-PDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRC 240
             L+ +    D+DSRG+EIEE CEA + EK+RAA A++NILSVLTH+SE+TGRLVC +RC
Sbjct: 181 SALSLECALDDADSRGLEIEETCEASELEKRRAASAMNNILSVLTHYSELTGRLVCGKRC 240

Query: 241 SLPRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRF 300
           +L  VG+L SSLN SL RIKQSFVLTDP+LPDMPIVY S+ F KLTGY R EVLGRNCRF
Sbjct: 241 NLTGVGLLSSSLNISLGRIKQSFVLTDPHLPDMPIVYASEAFFKLTGYARHEVLGRNCRF 300

Query: 301 LSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGV 360
           LSG DTDSS +++IKES+Q+E+ACTVRILNYRK+KSSFWN LH+SP+RNASGK+AYFVGV
Sbjct: 301 LSGEDTDSSAIYRIKESVQNEKACTVRILNYRKDKSSFWNLLHVSPIRNASGKIAYFVGV 360

Query: 361 QMDEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           QM+E  K QD HGL+P+M+QLS V AVR+AV
Sbjct: 361 QMEEACKNQDGHGLSPEMRQLSAVGAVRIAV 385

[Close]

BLAST of Lsi04G004590 vs. TrEMBL
Match: A0A126X426_HAMVI (Putative LOV domain-containing protein OS=Hamamelis virginiana PE=2 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 2.9e-146
Identity = 269/389 (69.15%), Postives = 316/389 (81.23%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           ME  LGLIEQS N RY LWVREAL +L DNFTITDPSI+GHPIVF S GFLKM+GY+KEE
Sbjct: 1   MESQLGLIEQSFNIRYPLWVREALDELRDNFTITDPSISGHPIVFASGGFLKMSGYSKEE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNGR+FQGP T+R S+M+IREA+REE+ IQ+NLLNYRKDGTPFW+ F M+PVFS+ED
Sbjct: 61  VIGKNGRIFQGPGTNRRSVMEIREAIREERAIQVNLLNYRKDGTPFWMLFHMSPVFSKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           GR+ HFV VQVPI + SR+S  GF R    S E+     + +  SCR+E+ SDS+ EL  
Sbjct: 121 GRVTHFVAVQVPISRKSRRSGSGFGRNGVNSCEDGSMLREIVFGSCRREVCSDSVVELGR 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
           +L  +S  DSD+R VE+EEPCEA D EKQ+A+ AISNILSVLTH++E TGRLVC +RCS+
Sbjct: 181 VLALESVLDSDNR-VEVEEPCEASDMEKQKASTAISNILSVLTHYTESTGRLVCGKRCSI 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
             +G L SSL  SL RIKQSFVLTDP+LP+MPIVY SD FLKLTGY R EVLG NCRFLS
Sbjct: 241 SGIGHLGSSLIISLGRIKQSFVLTDPHLPEMPIVYASDSFLKLTGYARHEVLGCNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTDSSTLFKIKES+Q+EQACTVRILNYRK+ SSFWN LHISPVRNASGK+AYFV +Q+
Sbjct: 301 GVDTDSSTLFKIKESIQTEQACTVRILNYRKDNSSFWNFLHISPVRNASGKIAYFVEIQI 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           +E  K QD   L+P+M+Q S V AV+VAV
Sbjct: 361 EEGCKNQDRQVLSPEMRQRSVVGAVKVAV 388

[Close]

BLAST of Lsi04G004590 vs. TAIR10
Match: AT2G02710.1 (AT2G02710.1 PAS/LOV protein B)

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-115
Identity = 217/385 (56.36%), Postives = 280/385 (72.73%), Query Frame = 1


Query: 9   EQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRM 68
           E S + RY+LW++EAL++L  NFTITDP I+GHPIVF S GFLKMTGY++EEVIG+NG++
Sbjct: 17  EDSFSGRYTLWIKEALEELPHNFTITDPFISGHPIVFASLGFLKMTGYSREEVIGRNGKV 76

Query: 69  FQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVG 128
           FQGP+T+R SIM+IREA+REE+ +Q++LLNYRK G+PFW+ F M PVF ++DG++ +FV 
Sbjct: 77  FQGPKTNRRSIMEIREAIREERSVQVSLLNYRKSGSPFWMLFHMCPVFGKDDGKVTNFVA 136

Query: 129 VQVPI--RKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDCLLNRDS 188
           VQVPI  R++ RK       +  +S +           SCR+E+   +    D  L  + 
Sbjct: 137 VQVPISGREHHRKK---LRNVGDLSSDT-----SPTFGSCRREVCFGNFVCQDRALPVEC 196

Query: 189 PPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSLPRVGIL 248
             D D +G+E  E CEA + EK +A  AI+N+LS+L H+SE++GRLVC +R  L  V  L
Sbjct: 197 --DDDEQGLEDWEQCEASESEKLKATEAINNVLSILVHYSELSGRLVCGKRYCLRGVDCL 256

Query: 249 YSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDS 308
            SSL  SL RIKQSFVLT+P LPDMPI+Y SD FL LTGY R EVLG+NCRFLSG DTDS
Sbjct: 257 SSSLVISLGRIKQSFVLTNPCLPDMPIIYASDAFLTLTGYKRQEVLGQNCRFLSGVDTDS 316

Query: 309 STLFKIKESLQSEQACTVRILNY--RKNKSSFWNDLHISPVRNASGKVAYFVGVQMDEDD 368
           S L+++KE +   Q+CTV+ILNY  RK+KSSFWN LHISPVRNASGK AYFVGVQ++   
Sbjct: 317 SVLYEMKECILKGQSCTVQILNYSNRKDKSSFWNLLHISPVRNASGKTAYFVGVQVEASC 376

Query: 369 KKQDEHGLNPKMKQLSTVAAVRVAV 390
           +  +   L P+ +QLS V AVRVAV
Sbjct: 377 RNTEIKELRPETRQLSVVGAVRVAV 391

[Close]

BLAST of Lsi04G004590 vs. TAIR10
Match: AT5G58140.2 (AT5G58140.2 phototropin 2)

HSP 1 Score: 219.5 bits (558), Expect = 3.9e-57
Identity = 136/415 (32.77%), Postives = 222/415 (53.49%), Query Frame = 1


Query: 15  RYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRMFQGPET 74
           R S  ++ AL  L   F ++D +    PIV+ S GF  MTGY+ +E++G+N R  QGP+T
Sbjct: 119 RVSQELKTALSTLQQTFVVSDATQPHCPIVYASSGFFTMTGYSSKEIVGRNCRFLQGPDT 178

Query: 75  SRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVGVQVPIR 134
            ++ + +IR+ V+  K     LLNY+KDGTPFW    +TP+  ++ G  I F+G+QV + 
Sbjct: 179 DKNEVAKIRDCVKNGKSYCGRLLNYKKDGTPFWNLLTVTPI-KDDQGNTIKFIGMQVEVS 238

Query: 135 KNSRKSRCGFVRIQGVSYENEFRACKNLLR--SCRQELLSDSISEL-DCLLNRDSP---- 194
           K +       +R  G+S        K+L+R  + ++E   DSI+E+   + +R S     
Sbjct: 239 KYTEGVNDKALRPNGLS--------KSLIRYDARQKEKALDSITEVVQTIRHRKSQVQES 298

Query: 195 --------PDSDSR---GVEIEEPCEACDDEKQRAAIAI---SNILSVLTHHSEVTGRLV 254
                   PDS +    G +  +  EA    +    ++    S + S    H ++     
Sbjct: 299 VSNDTMVKPDSSTTPTPGRQTRQSDEASKSFRTPGRVSTPTGSKLKSSNNRHEDLLRMEP 358

Query: 255 CERRCSLPRVGILYS--------------SLNTSLNRIKQSFVLTDPNLPDMPIVYVSDE 314
            E   S   +G   S               L T+L RI+++FV++DP LPD PI++ SD 
Sbjct: 359 EELMLSTEVIGQRDSWDLSDRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDS 418

Query: 315 FLKLTGYTRCEVLGRNCRFLSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWND 374
           FL+LT Y+R E+LGRNCRFL G +TD +T+ KI+++++ ++  TV+++NY K+   FWN 
Sbjct: 419 FLELTEYSREEILGRNCRFLQGPETDQATVQKIRDAIRDQREITVQLINYTKSGKKFWNL 478

Query: 375 LHISPVRNASGKVAYFVGVQMDEDDKKQDEHGLNPKMKQLSTVAAVRVAVIVNLT 395
            H+ P+R+  G++ YF+GVQ+D  D       + P   +LS    ++ + +V  T
Sbjct: 479 FHLQPMRDQKGELQYFIGVQLDGSDH------VEPLQNRLSERTEMQSSKLVKAT 518

[Close]

BLAST of Lsi04G004590 vs. TAIR10
Match: AT3G45780.1 (AT3G45780.1 phototropin 1)

HSP 1 Score: 133.7 bits (335), Expect = 2.8e-31
Identity = 57/112 (50.89%), Postives = 85/112 (75.89%), Query Frame = 1


Query: 250 LNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTDTDSSTL 309
           L T+L RI+++FV+TDP LPD PI++ SD FL+LT Y+R E+LGRNCRFL G +TD +T+
Sbjct: 466 LATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDLTTV 525

Query: 310 FKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQMD 362
            KI+ ++ ++   TV+++NY K+   FWN  H+ P+R+  G+V YF+GVQ+D
Sbjct: 526 KKIRNAIDNQTEVTVQLINYTKSGKKFWNIFHLQPMRDQKGEVQYFIGVQLD 577

[Close]

BLAST of Lsi04G004590 vs. TAIR10
Match: AT1G68050.1 (AT1G68050.1 flavin-binding, kelch repeat, f box 1)

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-12
Identity = 37/110 (33.64%), Postives = 60/110 (54.55%), Query Frame = 1


Query: 260 SFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLSGTD---------TDSSTLF 319
           SF+++D   PD P++YV+  F   TGY   EVLGRNCRFL   D          D   + 
Sbjct: 55  SFIVSDALEPDFPLIYVNRVFEVFTGYRADEVLGRNCRFLQYRDPRAQRRHPLVDPVVVS 114

Query: 320 KIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 361
           +I+  L+        +LN+RK+ +   N L ++P+R+  G + + +G+Q+
Sbjct: 115 EIRRCLEEGIEFQGELLNFRKDGTPLVNRLRLAPIRDDDGTITHVIGIQV 164

[Close]

BLAST of Lsi04G004590 vs. TAIR10
Match: AT5G57360.2 (AT5G57360.2 Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 6.5e-12
Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1


Query: 31  FTITDPSIAGHPIVFVSPGFLKMTGYTKEEVIGKNGRMFQ--GPETSRSS-------IMQ 90
           F +TD      PI++V+  F  +TGY  EEV+G N R  Q  GP   R         + +
Sbjct: 47  FVVTDAVEPDQPIIYVNTVFEMVTGYRAEEVLGGNCRFLQCRGPFAKRRHPLVDSMVVSE 106

Query: 91  IREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEEDGRIIHFVGVQ 131
           IR+ + E    Q  LLN+RKDG+P     ++TP++ ++D  I H +G+Q
Sbjct: 107 IRKCIDEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDD-TITHIIGIQ 154

[Close]

BLAST of Lsi04G004590 vs. NCBI nr
Match: gi|659090991|ref|XP_008446311.1| (PREDICTED: protein TWIN LOV 1 isoform X1 [Cucumis melo])

HSP 1 Score: 721.8 bits (1862), Expect = 6.8e-205
Identity = 360/389 (92.54%), Postives = 370/389 (95.12%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           MELPLGLIEQSLNSRYSLWVREAL +LSDNFTITDPSIAGHPIVFVSPGFLK TGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNNLSDNFTITDPSIAGHPIVFVSPGFLKTTGYTKEE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNGRMFQGPETSRSS+M IREAVR+EK IQINLLNYRKDGTPFWVFFQMTPVFS+ED
Sbjct: 61  VIGKNGRMFQGPETSRSSVMLIREAVRQEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           GRIIHFVGVQVPI KNSRKSR GF+RIQGVSYENEFRACK+ L SCR+EL+SDSISELDC
Sbjct: 121 GRIIHFVGVQVPILKNSRKSRRGFLRIQGVSYENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
            LNRD  PDSDSRGVEIEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCSL
Sbjct: 181 TLNRDPQPDSDSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
            RVGIL SSLNTSLNRIKQSFVLTDPNLPDMPIVY SDEFLKLTGYTRCEVLGRNCRFLS
Sbjct: 241 SRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           DEDDKKQDEHG NPKM+QLSTV AV+VAV
Sbjct: 361 DEDDKKQDEHGFNPKMRQLSTVGAVKVAV 389

[Close]

BLAST of Lsi04G004590 vs. NCBI nr
Match: gi|778705309|ref|XP_011655669.1| (PREDICTED: protein TWIN LOV 1 [Cucumis sativus])

HSP 1 Score: 721.5 bits (1861), Expect = 8.9e-205
Identity = 358/389 (92.03%), Postives = 370/389 (95.12%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           MELPLGLIEQSLNSRYSLWVREAL DLSDNFTITDP IAGHPIVFVSPGFLKMTGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNDLSDNFTITDPCIAGHPIVFVSPGFLKMTGYTKEE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNG+MFQGPETSRSS+M IREAVREEK IQINLLNYRKDGTPFWVFFQMTPVFS+ED
Sbjct: 61  VIGKNGKMFQGPETSRSSVMLIREAVREEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           G+IIHFVGVQVPI KNSRKSRCGFVRIQG S+ENEFRACK+ L SCR+EL+SDSISELDC
Sbjct: 121 GQIIHFVGVQVPILKNSRKSRCGFVRIQGDSHENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
            LNRDS PDS+SRGVEIEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCSL
Sbjct: 181 TLNRDSQPDSNSRGVEIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
           PRVGIL SSLNTSLNRIKQSFVLTDPNLPDMPIVY SDEFLKLTGYTRCEVLGRNCRFLS
Sbjct: 241 PRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLH+SPV NASGK+AYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHVSPVHNASGKLAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           D DDKKQDEHGLNPK KQLSTV AV+VAV
Sbjct: 361 DADDKKQDEHGLNPKTKQLSTVGAVKVAV 389

[Close]

BLAST of Lsi04G004590 vs. NCBI nr
Match: gi|659090993|ref|XP_008446312.1| (PREDICTED: protein TWIN LOV 1 isoform X2 [Cucumis melo])

HSP 1 Score: 712.6 bits (1838), Expect = 4.1e-202
Identity = 358/389 (92.03%), Postives = 368/389 (94.60%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           MELPLGLIEQSLNSRYSLWVREAL +LSDNFTITDPSIAGHPIVFVSPGFLK TGYTKEE
Sbjct: 1   MELPLGLIEQSLNSRYSLWVREALNNLSDNFTITDPSIAGHPIVFVSPGFLKTTGYTKEE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNGRMFQGPETSRSS+M IREAVR+EK IQINLLNYRKDGTPFWVFFQMTPVFS+ED
Sbjct: 61  VIGKNGRMFQGPETSRSSVMLIREAVRQEKEIQINLLNYRKDGTPFWVFFQMTPVFSKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           GRIIHFVGVQVPI KNSRKSR GF+RIQGVSYENEFRACK+ L SCR+EL+SDSISELDC
Sbjct: 121 GRIIHFVGVQVPILKNSRKSRRGFLRIQGVSYENEFRACKSFLGSCRRELMSDSISELDC 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
            LNRD  PDSDSR  EIEEPCEACDDEKQRAAIAISNIL VLTHHSEVTG LVCERRCSL
Sbjct: 181 TLNRDPQPDSDSR--EIEEPCEACDDEKQRAAIAISNILFVLTHHSEVTGGLVCERRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
            RVGIL SSLNTSLNRIKQSFVLTDPNLPDMPIVY SDEFLKLTGYTRCEVLGRNCRFLS
Sbjct: 241 SRVGILCSSLNTSLNRIKQSFVLTDPNLPDMPIVYASDEFLKLTGYTRCEVLGRNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM
Sbjct: 301 GIDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           DEDDKKQDEHG NPKM+QLSTV AV+VAV
Sbjct: 361 DEDDKKQDEHGFNPKMRQLSTVGAVKVAV 387

[Close]

BLAST of Lsi04G004590 vs. NCBI nr
Match: gi|1001018847|gb|AML79584.1| (putative LOV domain-containing protein [Hydrangea quercifolia])

HSP 1 Score: 535.8 bits (1379), Expect = 6.9e-149
Identity = 265/391 (67.77%), Postives = 319/391 (81.59%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           ME  LGLIEQS N RYSLWVREAL +L DNFTITDPSI+GHPIVF S GFLKM+GY+++E
Sbjct: 1   METQLGLIEQSFNLRYSLWVREALDELPDNFTITDPSISGHPIVFASLGFLKMSGYSRDE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIGKNGR+FQGP T R S+M+IREA+REE+ IQIN+LNYRKDGTPFW+ F M PVF++ED
Sbjct: 61  VIGKNGRVFQGPRTCRRSVMEIREAIREERAIQINILNYRKDGTPFWMLFHMCPVFNKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVS--YENEFRACKNLLRSCRQELLSDSISEL 180
           GR+IHFV VQVPI +  R+S  GF R  GV   ++     C+ L  SCR+E+ SDS+ +L
Sbjct: 121 GRVIHFVAVQVPILRKPRRSGGGFGR-NGVDLCHDRSGGFCETLGGSCRREVHSDSVVQL 180

Query: 181 DCLLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRC 240
            C L  DS   SD RG++++EPCEA D +K++A  A+SNILSVLTH+SE+TGRLVC +RC
Sbjct: 181 GCFLAMDSVLGSDDRGLDVDEPCEATDLDKRKAVTAVSNILSVLTHYSELTGRLVCGKRC 240

Query: 241 SLPRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRF 300
            L  +G+L SSLN SL RIKQSFVLTD +LPDMPIVY SD FLKLTGY R E+LGRNCRF
Sbjct: 241 CLSGMGLLGSSLNISLGRIKQSFVLTDAHLPDMPIVYASDAFLKLTGYARHEILGRNCRF 300

Query: 301 LSGTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGV 360
           L G DTDSST+F+IKES+++EQ CTVRILNYRK+KS FWN LHISPVRNASGKVAYFVG+
Sbjct: 301 LGGVDTDSSTVFQIKESIRTEQPCTVRILNYRKDKSQFWNFLHISPVRNASGKVAYFVGI 360

Query: 361 QMDEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           Q+DE +K  D++GL P+M+QLS V AV+VAV
Sbjct: 361 QIDESNKNDDKNGLGPEMRQLSVVGAVKVAV 390

[Close]

BLAST of Lsi04G004590 vs. NCBI nr
Match: gi|1001016034|gb|AML78307.1| (putative LOV domain-containing protein [Staphylea trifolia])

HSP 1 Score: 528.1 bits (1359), Expect = 1.4e-146
Identity = 264/389 (67.87%), Postives = 314/389 (80.72%), Query Frame = 1


Query: 1   MELPLGLIEQSLNSRYSLWVREALKDLSDNFTITDPSIAGHPIVFVSPGFLKMTGYTKEE 60
           M+  LGLIEQS N+RYSLWVREAL++  DNFTITDPSI+GHPIVF SPGFLKM+GY+K+E
Sbjct: 1   MDSQLGLIEQSFNTRYSLWVREALEEFPDNFTITDPSISGHPIVFASPGFLKMSGYSKQE 60

Query: 61  VIGKNGRMFQGPETSRSSIMQIREAVREEKGIQINLLNYRKDGTPFWVFFQMTPVFSEED 120
           VIG+NGRMFQGP T+R S+M+IREA+REE+ IQINLLNYRKDGTPFW+ F M+PVF +ED
Sbjct: 61  VIGQNGRMFQGPRTNRRSVMEIREAIREERTIQINLLNYRKDGTPFWMLFHMSPVFGKED 120

Query: 121 GRIIHFVGVQVPIRKNSRKSRCGFVRIQGVSYENEFRACKNLLRSCRQELLSDSISELDC 180
           GR+IHFV VQ PI + SR      +       E+ +     +  SCR+E+ SDS+ EL  
Sbjct: 121 GRVIHFVAVQAPILRKSRGRNLENL------CEDGYGMGDMVYGSCRREVCSDSLVELGR 180

Query: 181 LLNRDSPPDSDSRGVEIEEPCEACDDEKQRAAIAISNILSVLTHHSEVTGRLVCERRCSL 240
           +L      DSD R +EIEEPCEA + EK+RAA A +NILSVLTH+SE+TG+LVCE+RCSL
Sbjct: 181 VLALKEISDSDCRELEIEEPCEASELEKRRAAAAFNNILSVLTHYSELTGKLVCEKRCSL 240

Query: 241 PRVGILYSSLNTSLNRIKQSFVLTDPNLPDMPIVYVSDEFLKLTGYTRCEVLGRNCRFLS 300
           PR G L SSLN SL RIKQSFVLTDP+LPDMPIVY SD FLKLTGY + EVLG NCRFLS
Sbjct: 241 PRAGCLSSSLNISLGRIKQSFVLTDPHLPDMPIVYASDAFLKLTGYAQHEVLGHNCRFLS 300

Query: 301 GTDTDSSTLFKIKESLQSEQACTVRILNYRKNKSSFWNDLHISPVRNASGKVAYFVGVQM 360
           G DTD ST ++IKES+QSE+ACTVRILNYRK+KSSFWN LHISPVRNASGK+AY+V VQ+
Sbjct: 301 GVDTDCSTQYRIKESIQSEKACTVRILNYRKDKSSFWNLLHISPVRNASGKIAYYVSVQI 360

Query: 361 DEDDKKQDEHGLNPKMKQLSTVAAVRVAV 390
           +E    QD HGL+P+MKQLS V AV++AV
Sbjct: 361 EEGCPNQDRHGLSPEMKQLSAVGAVKIAV 383

The following BLAST results are available for this feature:

BLAST of Lsi04G004590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TLOV1_ARATH	3.2e-114	56.36	Protein TWIN LOV 1 OS=Arabidopsis thaliana GN=TLP1 PE=1 SV=2	[more]
PHOT2_ARATH	6.9e-56	32.77	Phototropin-2 OS=Arabidopsis thaliana GN=PHOT2 PE=1 SV=2	[more]
PHOT2_ORYSJ	1.5e-31	44.14	Phototropin-2 OS=Oryza sativa subsp. japonica GN=PHOT2 PE=1 SV=1	[more]
PHT1B_ORYSJ	1.3e-30	49.17	Phototropin-1B OS=Oryza sativa subsp. japonica GN=PHOT1B PE=1 SV=2	[more]
PHT1A_ORYSJ	1.3e-30	49.17	Phototropin-1A OS=Oryza sativa subsp. japonica GN=PHOT1A PE=1 SV=2	[more]

BLAST of Lsi04G004590 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSK8_CUCSA	6.2e-205	92.03	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G604290 PE=4 SV=1	[more]
A0A140F7I0_HYDQU	4.8e-149	67.77	Putative LOV domain-containing protein OS=Hydrangea quercifolia PE=2 SV=1	[more]
A0A126X0Q8_STATR	1.0e-146	67.87	Putative LOV domain-containing protein OS=Staphylea trifolia PE=2 SV=1	[more]
A0A126WZ81_9ROSA	1.0e-146	67.26	Putative LOV domain-containing protein OS=Rosa palustris PE=2 SV=1	[more]
A0A126X426_HAMVI	2.9e-146	69.15	Putative LOV domain-containing protein OS=Hamamelis virginiana PE=2 SV=1	[more]

BLAST of Lsi04G004590 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G02710.1	1.8e-115	56.36	PAS/LOV protein B	[more]
AT5G58140.2	3.9e-57	32.77	phototropin 2	[more]
AT3G45780.1	2.8e-31	50.89	phototropin 1	[more]
AT1G68050.1	1.0e-12	33.64	flavin-binding, kelch repeat, f box 1	[more]
AT5G57360.2	6.5e-12	35.78	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of Lsi04G004590 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659090991\|ref\|XP_008446311.1\|	6.8e-205	92.54	PREDICTED: protein TWIN LOV 1 isoform X1 [Cucumis melo]	[more]
gi\|778705309\|ref\|XP_011655669.1\|	8.9e-205	92.03	PREDICTED: protein TWIN LOV 1 [Cucumis sativus]	[more]
gi\|659090993\|ref\|XP_008446312.1\|	4.1e-202	92.03	PREDICTED: protein TWIN LOV 1 isoform X2 [Cucumis melo]	[more]
gi\|1001018847\|gb\|AML79584.1\|	6.9e-149	67.77	putative LOV domain-containing protein [Hydrangea quercifolia]	[more]
gi\|1001016034\|gb\|AML78307.1\|	1.4e-146	67.87	putative LOV domain-containing protein [Staphylea trifolia]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

Vocabulary: **Molecular Function**
Term	Definition
GO:0000155	phosphorelay sensor kinase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR001610	PAC
IPR000700	PAS-assoc_C
IPR000014	PAS

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0023014	signal transduction by protein phosphorylation
biological_process	GO:0046777	protein autophosphorylation
biological_process	GO:0010155	regulation of proton transport
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009365	protein histidine kinase complex
molecular_function	GO:0000155	phosphorelay sensor kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G004590.1	Lsi04G004590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000014	PAS domain	PFAM	PF13426	PAS_9	coord: 41..131 score: 6.6E-18coord: 260..361 score: 1.1
IPR000014	PAS domain	SMART	SM00091	pas_2	coord: 18..87 score: 0.078coord: 248..321 score:
IPR000014	PAS domain	TIGRFAMs	TIGR00229	TIGR00229	coord: 43..128 score: 5.5E-11coord: 273..369 score: 7.3
IPR000014	PAS domain	PROFILE	PS50112	PAS	coord: 246..295 score: 10.329coord: 20..89 score: 1
IPR000014	PAS domain	unknown	SSF55785	PYP-like sensor domain (PAS domain)	coord: 29..130 score: 8.83E-23coord: 261..361 score: 7.03
IPR000700	PAS-associated, C-terminal	PROFILE	PS50113	PAC	coord: 320..374 score: 12
IPR001610	PAC motif	SMART	SM00086	pac_2	coord: 93..136 score: 7.8E-6coord: 323..365 score: 1.
None	No IPR available	GENE3D	G3DSA:3.30.450.20		coord: 259..361 score: 3.1E-31coord: 30..131 score: 7.3
None	No IPR available	PANTHER	PTHR24351	RIBOSOMAL PROTEIN S6 KINASE	coord: 148..389 score: 7.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G004590	Csa5G604290	Cucumber (Chinese Long) v2	culsiB368
Lsi04G004590	CSPI05G23410	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G004590	Cucsa.285360	Cucumber (Gy14) v1	cgylsiB465
Lsi04G004590	CmaCh04G016300	Cucurbita maxima (Rimu)	cmalsiB678
Lsi04G004590	CmoCh04G017080	Cucurbita moschata (Rifu)	cmolsiB671
Lsi04G004590	MELO3C012066	Melon (DHL92) v3.5.1	lsimeB281
Lsi04G004590	MELO3C012066.2	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G004590	Bhi07G001309	Wax gourd	lsiwgoB380
Lsi04G004590	Cp4.1LG01g12740	Cucurbita pepo (Zucchini)	cpelsiB360
Lsi04G004590	CsGy5G022930	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G004590	Carg01729	Silver-seed gourd	carlsiB764
Lsi04G004590	CsaV3_5G032360	Cucumber (Chinese Long) v3	cuclsiB393

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G004590	Bottle gourd (USVL1VR-Ls)	lsilsiB097
Lsi04G004590	Bottle gourd (USVL1VR-Ls)	lsilsiB139
Lsi04G004590	Cucumber (Gy14) v1	cgylsiB119
Lsi04G004590	Cucumber (Gy14) v1	cgylsiB339
Lsi04G004590	Cucurbita maxima (Rimu)	cmalsiB379
Lsi04G004590	Cucurbita moschata (Rifu)	cmolsiB364
Lsi04G004590	Cucurbita pepo (Zucchini)	cpelsiB032
Lsi04G004590	Wild cucumber (PI 183967)	cpilsiB050
Lsi04G004590	Wild cucumber (PI 183967)	cpilsiB055
Lsi04G004590	Cucumber (Chinese Long) v2	culsiB051
Lsi04G004590	Cucumber (Chinese Long) v2	culsiB056
Lsi04G004590	Melon (DHL92) v3.5.1	lsimeB289
Lsi04G004590	Melon (DHL92) v3.5.1	lsimeB294
Lsi04G004590	Watermelon (Charleston Gray)	lsiwcgB274
Lsi04G004590	Watermelon (Charleston Gray)	lsiwcgB283
Lsi04G004590	Watermelon (Charleston Gray)	lsiwcgB293
Lsi04G004590	Watermelon (Charleston Gray)	lsiwcgB304
Lsi04G004590	Watermelon (97103) v1	lsiwmB312
Lsi04G004590	Watermelon (97103) v1	lsiwmB323
Lsi04G004590	Watermelon (97103) v1	lsiwmB341
Lsi04G004590	Melon (DHL92) v3.6.1	lsimedB303
Lsi04G004590	Melon (DHL92) v3.6.1	lsimedB308
Lsi04G004590	Silver-seed gourd	carlsiB091
Lsi04G004590	Cucumber (Chinese Long) v3	cuclsiB061
Lsi04G004590	Cucumber (Chinese Long) v3	cuclsiB057
Lsi04G004590	Watermelon (97103) v2	lsiwmbB261
Lsi04G004590	Watermelon (97103) v2	lsiwmbB284
Lsi04G004590	Wax gourd	lsiwgoB377
Lsi04G004590	Wax gourd	lsiwgoB408