Lsi04G004490 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G004490
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 4302852 .. 4303996 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAAATCATTAGAACATTTCATCCTAATACAACGTTGTTTTCTTCTTAACAAGTCACTTAGACCAAGAAAGGCATAAACTAAGAATACCTCCATCCCAAGGTGTATCATCTGGCCTGCAAAAACCAACAAAAAAACCATGTCAAAGACCACAGCACCAGTAGTCACAGAAGCAATTATCGTATAAAAGTTCTGATAAGAAAGATCGAGGTCATAATTATTTTCCCAGCTTACCCAAATATAACAGCATTCCATAGCATGATATTGTTGTCTTGGGGAGCACCACTGATGCCGGCAGGTGGATCTTGTTGCAACCTCTTGAAGTCCCTCATCAGTCTCTTCCTTGCAGGAGTAGACATCCTCACCGGCTGAAAACAAACCAAGACAACAATCTGAACTTCATTTGTCATAAAAACCATTATGGCCGATGCAGAAAAAGGAATATGCTCGATTCGAACATGAAGAAGTGCCGCTGAACAAGGATACAAAAAATAAAAATTCAACCAAGTGAACGTTCGATGAACATGAAACAATTCAGTAAAATGAGAAGGAGGCGCCTCTATCTTCCATGATATCACCATAACGAAAAAGAAAAATGGATCACTTCAAGGGGCTTTTTAAGTGTGTGTGTGTGTGTGTATATATATAGCAGCTTCGAAATGGAAGTCTAAAGCATACGTCGGCAAGAACCAAAAGGATGGAGAAGGAGGTGATAACATCTAATTCCATTTACAGGATTAACAAGAACACAAAGTAACCTCCTTAGACACATAATTCAATCCGGAAAACAAACTACTAGCTACTACAAACCCATGCCTTAACGAAACTAAAACGCCAGCTCGTTGCACGTCGATAAATCCTTTTCCGTACCCTCGCGGTGAACAAAACCCCTAGATCTCCGTCCTAAACTGCTGGTCAGACACGCAGAGTATAATTCCTAACAAATTAGGGCGAACAAGCTTTTAAGACCTCAGTATCGGCACATGTACATCCACGTCAATTACATCGAAAACAAACACCATGGTGATCGACGAATCGGTGCCAAATTTAACAAAGCGACCAAATAAGACAAGAACTCAAAGAATTGAATGGTTGAAATCCCTTACCCGTAACCTAGCGCGGCGAGCCGAGAACTTTGGCTGA

mRNA sequence

ATGACTTCGAAATGGAAGTCTAAAGCATACGTCGGCAAGAACCAAAAGGATGGAGAAGGAGACCTCAGTATCGGCACATGTACATCCACGTCAATTACATCGAAAACAAACACCATGGTGATCGACGAATCGGTGCCAAATTTAACAAAGCGACCAAATAAGACAAGAACTCAAAGAATTGAATGGTTGAAATCCCTTACCCGTAACCTAGCGCGGCGAGCCGAGAACTTTGGCTGA

Coding sequence (CDS)

ATGACTTCGAAATGGAAGTCTAAAGCATACGTCGGCAAGAACCAAAAGGATGGAGAAGGAGACCTCAGTATCGGCACATGTACATCCACGTCAATTACATCGAAAACAAACACCATGGTGATCGACGAATCGGTGCCAAATTTAACAAAGCGACCAAATAAGACAAGAACTCAAAGAATTGAATGGTTGAAATCCCTTACCCGTAACCTAGCGCGGCGAGCCGAGAACTTTGGCTGA

Protein sequence

MTSKWKSKAYVGKNQKDGEGDLSIGTCTSTSITSKTNTMVIDESVPNLTKRPNKTRTQRIEWLKSLTRNLARRAENFG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G004490.1Lsi04G004490.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G004490Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G004490Cucurbita pepo (Zucchini)cpelsiB360
Lsi04G004490Wild cucumber (PI 183967)cpilsiB050
Lsi04G004490Wild cucumber (PI 183967)cpilsiB055
Lsi04G004490Wild cucumber (PI 183967)cpilsiB372
Lsi04G004490Wild cucumber (PI 183967)cpilsiB375
Lsi04G004490Cucumber (Chinese Long) v2culsiB051
Lsi04G004490Cucumber (Chinese Long) v2culsiB056
Lsi04G004490Cucumber (Chinese Long) v2culsiB368
Lsi04G004490Cucumber (Chinese Long) v2culsiB371
Lsi04G004490Melon (DHL92) v3.5.1lsimeB281
Lsi04G004490Melon (DHL92) v3.5.1lsimeB289
Lsi04G004490Melon (DHL92) v3.5.1lsimeB294
Lsi04G004490Watermelon (Charleston Gray)lsiwcgB253
Lsi04G004490Watermelon (Charleston Gray)lsiwcgB274
Lsi04G004490Watermelon (Charleston Gray)lsiwcgB283
Lsi04G004490Watermelon (Charleston Gray)lsiwcgB293
Lsi04G004490Watermelon (Charleston Gray)lsiwcgB304
Lsi04G004490Watermelon (97103) v1lsiwmB284
Lsi04G004490Watermelon (97103) v1lsiwmB312
Lsi04G004490Watermelon (97103) v1lsiwmB341
Lsi04G004490Cucumber (Gy14) v2cgyblsiB337
Lsi04G004490Cucumber (Gy14) v2cgyblsiB341
Lsi04G004490Melon (DHL92) v3.6.1lsimedB292
Lsi04G004490Melon (DHL92) v3.6.1lsimedB297
Lsi04G004490Melon (DHL92) v3.6.1lsimedB303
Lsi04G004490Melon (DHL92) v3.6.1lsimedB308
Lsi04G004490Silver-seed gourdcarlsiB091
Lsi04G004490Silver-seed gourdcarlsiB764
Lsi04G004490Cucumber (Chinese Long) v3cuclsiB061
Lsi04G004490Cucumber (Chinese Long) v3cuclsiB393
Lsi04G004490Cucumber (Chinese Long) v3cuclsiB397
Lsi04G004490Watermelon (97103) v2lsiwmbB261
Lsi04G004490Watermelon (97103) v2lsiwmbB284
Lsi04G004490Watermelon (97103) v2lsiwmbB311
Lsi04G004490Wax gourdlsiwgoB354
Lsi04G004490Wax gourdlsiwgoB377
Lsi04G004490Wax gourdlsiwgoB380
Lsi04G004490Wax gourdlsiwgoB408
Lsi04G004490Bottle gourd (USVL1VR-Ls)lsilsiB097
Lsi04G004490Bottle gourd (USVL1VR-Ls)lsilsiB099
Lsi04G004490Bottle gourd (USVL1VR-Ls)lsilsiB139
Lsi04G004490Cucumber (Gy14) v1cgylsiB119
Lsi04G004490Cucumber (Gy14) v1cgylsiB256
Lsi04G004490Cucumber (Gy14) v1cgylsiB339
Lsi04G004490Cucumber (Gy14) v1cgylsiB465
Lsi04G004490Cucurbita maxima (Rimu)cmalsiB280
Lsi04G004490Cucurbita maxima (Rimu)cmalsiB379
Lsi04G004490Cucurbita maxima (Rimu)cmalsiB678
Lsi04G004490Cucurbita moschata (Rifu)cmolsiB269
Lsi04G004490Cucurbita moschata (Rifu)cmolsiB364
Lsi04G004490Cucurbita moschata (Rifu)cmolsiB429
Lsi04G004490Cucurbita moschata (Rifu)cmolsiB671