Lsi04G002850 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATGTTCTTTCCATCAACTCTTTGTAGTTTGTTTAGAGGGAAGATAAGATTACTTTCTCAAACGACATCATTTCTCATCGAAAAATATTTAGCTCAAACAATAAAATTCTATCACGGTCTATCGCTGATAAACAGTAATTTTTTTTATATTTGTAAATAGTTTAATATTTTTTCTGTTTGTAATAATTTTCCAAAAAAAAAAAAATCAATTTTAACCATTATAATTTTAAAATTTTAATCTCATTTTATTTGACTACAGACTTAGATAACCGTTGCAATTTTAGCCAATAATGTGTAATTCACCTACTAACTACCCAAAAGGTTTCAAAAAATCCTTAGAGGTAAGTAATGATATTAAACTTGATAATTTGATCAATGCACAAAATTGAGAATTGGATATCAAAATTCGGCAAATTTCATAAATCCTAAACTCTAAATTTAAGGGCTTATTTGACACACAACCAAAATTTTAATTGAACATTATTAATTAATATAATATAAGGAAGATTTTTAAAAATAGAAAAACAAGGGAAACTATTTACACAAAATAGCAAAATTTTGATATAGTTGTGATAGATGCTGATAGAAGTCTATCGGAGTCTGTCTATCAGCGATAGAAATGATAGAAATCTATCACTGATAGATACTGATAGAAGTCTATCAATGTCTATCAATATTTTTTCTTTTTTGCTATTTTCTATAAATAGTTTGACATTTTTTTTATCTGTGAAAATTTCTCATAATATGAGGATGTACAATTTTTAAAAAACAGTTGATCCAAAGTATGAGGGCAACAGCCACCGTGCAACTGGCAAGTGGCCAAATCAGGAACACATAATTTGATGGAATTGATTATTTTGATGAACATATAGCGTAAACTCATACAAATAAATAGATAGATAATTACTCGTCTTCTTGACTTCGCGCGAAAGACACGAAGAAGCTATAGCAGTGGACGAGAAGCAGCGATGGCCGCTGTACAGTGCACAAACTTCTGCAAACCATTTGGCATCAGAAGGGTTTTCTCCCCTTCTTCATTTGCCCTTTCAATTTCCCCTACGAGTTATCCCACTTTCAAAGCTTCCAGCCCATTGCCGAACATCTCGATTTCCAGGTCTTCTATTCTGCATCTCTACATTTTTCTTTAGTTGGAGACTACAAGTTGTTTTTGCCCTAACGCTTCGTTACAGGTCGAATAGGGTTGTTCCAGCTGTGATTGCCGAAGAGAGTGCCGATGGGGCGACTGTTTCTGCCACTGATGCGTTTAATCTAACTTATCTGGAGGCGGGTTCTTAGTACTTTTATGACTTGAGTTCGATATATTCGTTGATTTTGAATGGCATGCTTAGAATTAATCTTCCCCCTTCCCTCTTTTTGTTTTAGGGAAATAGTTGGTTGTGGGAAGTGGGCGGATTGACCATTTTGGTAGATCCTGTTTTGGTTGGTAATCTTGATTTTGGTATCTCATGGCTGTATGAAGCATCCAAGAAGATATTGAAGAATTTCCAGGTAATTTCAGAATAGCTATAAGCACTTTTTTGGTGTTTGGTTTCTCTGATGTAGTTAATAAAGTAATTCTGATATTTGAGCAACTTTAGTGCAGTTGAGTGAACTTCCTGAAGTTGACTGCTTACTCATTACACAAAGCCTTGACGATCACTGCCATTTGAAGACCCTGAGGCCTCTCTCTAAGAAGTCCCCAAATGTAAAGGTTGTAGCAACTCCCAATGCAAAGACATTGTTGGATCCACTTTTCAGTAATGTAAGCAGATTCTGCTATGGATTCTCTCTTTGTTTCATTCTGCTGTCATTCGAGGCTAAATTGCTAAATCATGTGACTAACATGCTGTTGTTTATTTGGTCAAACAGAGATATATATAGAGAGACATGTTAGTGTAGTTAGAAAGCATTTTGTAAAGAAAAATACTTAGGTGCATTCCGGCCTGTACCTATGTTTGTGCATCCCACCAAATTGTCTAATTATAATTTGTCACATAGCAAATTCTTACTTCTTTTTTGAATTATTTTAATTCACTGTTTGAGTGTGGGATGAGTGTGGGATGCATAAAGATGAGTGCATCTTGGGTTTGGATAGACTATCAACGTACAAGGAGTAAAGATTCCTTTTTCTAAAATCATGTTGTATCAACGTACAAGGCATGAAGACATAAAGATCAAGAGTGATTAAAGATAACAGAGGAGCATCTCATACACCACAATAATTTTAAAAATCAAAGCTTTCCTACATACAGAGGCGCTATGCTTTATTATTCTTTGTTAAACGAGCATATTAACAAGTGTTTTGGGCCCTTTTTCCTCTTTCACCTTTGCGTGCCCTCCCTTTCAATTCAATGTTTCATGACGCCTAATTTAATTAGATTATTACTGGAAGCATTTCATATACCACATTGTGCTCATATGTGAATGTTCTAAGGCTAGTTTTAGTTATATCCAGGTCACTTATCTAGAACCTGGTCAGAGTTCAGTTGTTGAAGCAAAAGATGGTTCTCAAGTACTCATTAGAGCCATTGCCGGACCAGTTCTAGGTCCTCCATGGCAGCGTCCTGAAAACGGGTAAAATTGTTGATATTCTTCATTGCTAATCCCACTAAATATTTTATGATAGTTTACATGATGAACATCGTATTTATTAACCTGGTTATTTAGTTTCCATCGCTTTGTATCTCTTATTAAATCTGATACAGGTATCTTGTTATTTCTCCCCAAGGCCAGCTGACTCTTTATTATGAACCTCATTGCTCTTACGACAAGGAATTATTGGGGAAAGAAAGGGCTGATATTGTCATCACACCTGTAATAAAGCAGCTTCTTCCTAATTTTACTCTTGTTTCTGGACAAGAAGATGCAGTTCAACTTGCAAAGCAGCTGCATGCAAAGTATGAATGCTTCCAGAACCTTAAATTCAGTACTTGGTGGAGGCATCTCTTTGTTTCTGTATAATTAAGTTTGAAACCCAAAATTGAGATTAAAAATCAAGAAAATTGGTGATGAAATGCATTTACGATATCAAAAGAGAATTACATAGGTACTAAGCATTCCACTGGCTAGTTCTCTTCCAGGACCGATCCTATAATATGACCAACCTAGTAACCTTTAACCTTTGCAATCTACTTTATTCATAAGTTCATAACCGTTACTCTTATAAACTCCCTAGCTAATAACTCTTACGCCCATGATAGCTTACAAATATTTCAATCTTATCCTATCAAATTATCCTTCCTTGTCATCTTTCAGGTTCATCGTGCCAATGAATAATGGTGATATGGATAGCAAAGGGCTTCTTGCAAGCTTAGTCAGTGCGGAAGGGACAATTGGATCTTTCAAGGTTAATATGTACTTTAACGGCAGCCATTATGAACTTGTGTCCGAACTGATATATTATCATATTCACAGGCATATTTGAACTTTGCTATGATGATTTGTAGTTTTCCAGTCAACTTTGGTTTATTTCTTGATATCATGGATACATGATTAAGGATAGAAAGCTGATGAAGTTGAATGAAAGTCAAGTAGTGTACTACTACAGAATGACCCAAACACTATTTTATTATTAGAATGTCAATTTCACAATCTAATAACACATGATGAAATAATCATCATGGGTTGGCTTAATGGCCAATAAGGGTCATGGGTATAATAAAGGGTTTAGAGGAAACATGTGTTATTTATGGTGACCACCGATCTAGGATTTAATATCCTATAAATTTTCTTGGTACCCAAATGTTATAGCATGCGGGTTGTCCGATGAAATTAGTTGAGATTCATGAAGTTGGCCCGGACACTTACATATGGTCGAATGAGTGAGAAGGTTGAAATGTCCCCTCCATTGTGGATTAACTTTTTCTTCAATGATAATGTGGGAGTCAATTCTTGCCACTGTTTACTTTCCACTCTGATACTGCACAATAAACGTTAGAAGGCTCTGTTAAATGCTTACTAATTTAATGCAATGCAGGAATTGTTGTCAAAGGAACTTCCAGAGGCAGTTGTCGTGGAGCCTACTCCTGGCGTACCACTTAACATTTCCCCACCTTCAGATCAAGCGTGAGTGCCTCGTTTTTCAATAATGAAAACTCACCTTTTGAATGTATACAATATATTGATGACGAAATCTAGTGAAGCCTGTGTTTCTTCAGCATCATTCGGTTTCCTTTTCACTTTTCTGAACTAAAATCCAACTCCCTCCATATCTTACGTGTGGAAAATGCAACAATCTTCTCATCCGGATGATCCCAAGATTGATCTCTAAAAGATTATTTACAGCTGTTTTAAGGTCTGTTTGGAAAGACTTTTCAAGGGCTTGAAAAAGAGTTCTTAAGCACTTAGAAACTCATTTTAAACAAGCCCTTAGTCTAAGTTTGAATAATAGTTTGTGTCAAATGGACCTTCTCAGTCTTTCAGGATTCATGAAGTGAGATTTCTCCCTCAACACTGGATGTAGAATATCCTAATGCCTACCTTTTTGGTAATAGGAGAGTGTTTGAGGAAGGAATGATAAAACACAATGGCCCATGGGCTCCCTTCTAGTGATGTCTAAAGGACTTCTGGCCCATAGTACTGAAAACATAGCCCAAATCAAACTCCGCCCAACTTCTTCTGCACTCACCTTTTACATTGATCATGATTATTCCAGTAGTAATTCAGCCCCAAAAATCTGCTGGTGGGTGGGAAGAGATTCAGATTCAGATTCAGTCCTTTTCTTTTTTTCTTTCTTTACAAGGAAAATGCAGATTAATTTATTACCACAAATGGAAAGTCTACTTGTTTTGCACATAGATCTTTGATATTACAACCAATTGATATTCTTAGCAAACCAAAGATTAGTTTTGAAATGAACTTGGACGAGATAATGGCCACTAGAGAAAAAGAAACTCAAGCAAATATTCAATTATCATTTGTTTGAAAGTCTTTCAAAGAGATAGTGTAGTTGTGTGAGAATGGCGTAGTAGATGTCTTTTAGGACATAAACAAAGTGGTTTGTGCTTGCTTAATTTGATCGGCTCAATGAAGGTTTGGTTAATTGATTTTTAATTAATGTCACTAATGAAGTTTGAAGAATCTTTGTTTAGTGGCCATTGACGATCTAAGAGATCCAAAAATAGAAAGGTGGATGTACTTGGACAGGTTTGTGAATGTAATTAGCTCTCATCCTCAACCAAATTCATCCAAGGAGGTGATGCCTTTTATAGCCTTTGGGTGATTAAAATATTGTTGTTATTGATTGATGTGTGTGTTTATGATAGGGTATTAAATTTTCATTGACATAACACCACTTTCATT ATGAATATAATTACTCGTCTTCTTGACTTCGCGCGAAAGACACGAAGAAGCTATAGCAGTGGACGAGAAGCAGCGATGGCCGCTGTACAGTGCACAAACTTCTGCAAACCATTTGGCATCAGAAGGGTTTTCTCCCCTTCTTCATTTGCCCTTTCAATTTCCCCTACGAGTTATCCCACTTTCAAAGCTTCCAGCCCATTGCCGAACATCTCGATTTCCAGTTGGAGACTACAAGTTGTTTTTGCCCTAACGCTTCGTTACAGGTCGAATAGGGTTGTTCCAGCTGTGATTGCCGAAGAGAGTGCCGATGGGGCGACTGTTTCTGCCACTGATGCGTTTAATCTAACTTATCTGGAGGCGGTGGGCGGATTGACCATTTTGGTAGATCCTGTTTTGGTTGGTAATCTTGATTTTGGTATCTCATGGCTGTATGAAGCATCCAAGAAGATATTGAAGAATTTCCAGTTGAGTGAACTTCCTGAAGTTGACTGCTTACTCATTACACAAAGCCTTGACGATCACTGCCATTTGAAGACCCTGAGGCCTCTCTCTAAGAAGTCCCCAAATGTAAAGGTTGTAGCAACTCCCAATGCAAAGACATTGTTGGATCCACTTTTCAGTAATGTCACTTATCTAGAACCTGGTCAGAGTTCAGTTGTTGAAGCAAAAGATGGTTCTCAAGTACTCATTAGAGCCATTGCCGGACCAGTTCTAGGTCCTCCATGGCAGCGTCCTGAAAACGGGTATCTTGTTATTTCTCCCCAAGGCCAGCTGACTCTTTATTATGAACCTCATTGCTCTTACGACAAGGAATTATTGGGGAAAGAAAGGGCTGATATTGTCATCACACCTGTAATAAAGCAGCTTCTTCCTAATTTTACTCTTGTTTCTGGACAAGAAGATGCAGTTCAACTTGCAAAGCAGCTGCATGCAAAGTTCATCGTGCCAATGAATAATGGTGATATGGATAGCAAAGGGCTTCTTGCAAGCTTAGTCAGTGCGGAAGGGACAATTGGATCTTTCAAGGAATTGTTGTCAAAGGAACTTCCAGAGGCAGTTGTCGTGGAGCCTACTCCTGGCGTACCACTTAACATTTCCCCACCTTCAGATCAAGCGTGAGTGCCTCGTTTTTCAATAATGAAAACTCACCTTTTGAATGTATACAATATATTGATGACGAAATCTAGTGAAGCCTGTGTTTCTTCAGCATCATTCGGTTTCCTTTTCACTTTTCTGAACTAAAATCCAACTCCCTCCATATCTTACGTGTGGAAAATGCAACAATCTTCTCATCCGGATGATCCCAAGATTGATCTCTAAAAGATTATTTACAGCTGTTTTAAGGTCTGTTTGGAAAGACTTTTCAAGGGCTTGAAAAAGAGTTCTTAAGCACTTAGAAACTCATTTTAAACAAGCCCTTAGTCTAAGTTTGAATAATAGTTTGTGTCAAATGGACCTTCTCAGTCTTTCAGGATTCATGAAGTGAGATTTCTCCCTCAACACTGGATGTAGAATATCCTAATGCCTACCTTTTTGGTAATAGGAGAGTGTTTGAGGAAGGAATGATAAAACACAATGGCCCATGGGCTCCCTTCTAGTGATGTCTAAAGGACTTCTGGCCCATAGTACTGAAAACATAGCCCAAATCAAACTCCGCCCAACTTCTTCTGCACTCACCTTTTACATTGATCATGATTATTCCAGTAGTAATTCAGCCCCAAAAATCTGCTGGTGGGTGGGAAGAGATTCAGATTCAGATTCAGTCCTTTTCTTTTTTTCTTTCTTTACAAGGAAAATGCAGATTAATTTATTACCACAAATGGAAAGTCTACTTGTTTTGCACATAGATCTTTGATATTACAACCAATTGATATTCTTAGCAAACCAAAGATTAGTTTTGAAATGAACTTGGACGAGATAATGGCCACTAGAGAAAAAGAAACTCAAGCAAATATTCAATTATCATTTGTTTGAAAGTCTTTCAAAGAGATAGTGTAGTTGTGTGAGAATGGCGTAGTAGATGTCTTTTAGGACATAAACAAAGTGGTTTGTGCTTGCTTAATTTGATCGGCTCAATGAAGGTTTGGTTAATTGATTTTTAATTAATGTCACTAATGAAGTTTGAAGAATCTTTGTTTAGTGGCCATTGACGATCTAAGAGATCCAAAAATAGAAAGGTGGATGTACTTGGACAGGTTTGTGAATGTAATTAGCTCTCATCCTCAACCAAATTCATCCAAGGAGGTGATGCCTTTTATAGCCTTTGGGTGATTAAAATATTGTTGTTATTGATTGATGTGTGTGTTTATGATAGGGTATTAAATTTTCATTGACATAACACCACTTTCATT ATGAATATAATTACTCGTCTTCTTGACTTCGCGCGAAAGACACGAAGAAGCTATAGCAGTGGACGAGAAGCAGCGATGGCCGCTGTACAGTGCACAAACTTCTGCAAACCATTTGGCATCAGAAGGGTTTTCTCCCCTTCTTCATTTGCCCTTTCAATTTCCCCTACGAGTTATCCCACTTTCAAAGCTTCCAGCCCATTGCCGAACATCTCGATTTCCAGTTGGAGACTACAAGTTGTTTTTGCCCTAACGCTTCGTTACAGGTCGAATAGGGTTGTTCCAGCTGTGATTGCCGAAGAGAGTGCCGATGGGGCGACTGTTTCTGCCACTGATGCGTTTAATCTAACTTATCTGGAGGCGGTGGGCGGATTGACCATTTTGGTAGATCCTGTTTTGGTTGGTAATCTTGATTTTGGTATCTCATGGCTGTATGAAGCATCCAAGAAGATATTGAAGAATTTCCAGTTGAGTGAACTTCCTGAAGTTGACTGCTTACTCATTACACAAAGCCTTGACGATCACTGCCATTTGAAGACCCTGAGGCCTCTCTCTAAGAAGTCCCCAAATGTAAAGGTTGTAGCAACTCCCAATGCAAAGACATTGTTGGATCCACTTTTCAGTAATGTCACTTATCTAGAACCTGGTCAGAGTTCAGTTGTTGAAGCAAAAGATGGTTCTCAAGTACTCATTAGAGCCATTGCCGGACCAGTTCTAGGTCCTCCATGGCAGCGTCCTGAAAACGGGTATCTTGTTATTTCTCCCCAAGGCCAGCTGACTCTTTATTATGAACCTCATTGCTCTTACGACAAGGAATTATTGGGGAAAGAAAGGGCTGATATTGTCATCACACCTGTAATAAAGCAGCTTCTTCCTAATTTTACTCTTGTTTCTGGACAAGAAGATGCAGTTCAACTTGCAAAGCAGCTGCATGCAAAGTTCATCGTGCCAATGAATAATGGTGATATGGATAGCAAAGGGCTTCTTGCAAGCTTAGTCAGTGCGGAAGGGACAATTGGATCTTTCAAGGAATTGTTGTCAAAGGAACTTCCAGAGGCAGTTGTCGTGGAGCCTACTCCTGGCGTACCACTTAACATTTCCCCACCTTCAGATCAAGCGTGA MNIITRLLDFARKTRRSYSSGREAAMAAVQCTNFCKPFGIRRVFSPSSFALSISPTSYPTFKASSPLPNISISSWRLQVVFALTLRYRSNRVVPAVIAEESADGATVSATDAFNLTYLEAVGGLTILVDPVLVGNLDFGISWLYEASKKILKNFQLSELPEVDCLLITQSLDDHCHLKTLRPLSKKSPNVKVVATPNAKTLLDPLFSNVTYLEPGQSSVVEAKDGSQVLIRAIAGPVLGPPWQRPENGYLVISPQGQLTLYYEPHCSYDKELLGKERADIVITPVIKQLLPNFTLVSGQEDAVQLAKQLHAKFIVPMNNGDMDSKGLLASLVSAEGTIGSFKELLSKELPEAVVVEPTPGVPLNISPPSDQA
BLAST of Lsi04G002850 vs. TrEMBL
Match: A0A0A0KUF8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608400 PE=4 SV=1) HSP 1 Score: 587.4 bits (1513), Expect = 1.2e-164 Identity = 303/353 (85.84%), Postives = 317/353 (89.80%), Query Frame = 1
BLAST of Lsi04G002850 vs. TrEMBL
Match: A0A0D2PX80_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G186000 PE=4 SV=1) HSP 1 Score: 442.2 bits (1136), Expect = 6.3e-121 Identity = 217/287 (75.61%), Postives = 247/287 (86.06%), Query Frame = 1
BLAST of Lsi04G002850 vs. TrEMBL
Match: A0A0D2PX71_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G185400 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.1e-120 Identity = 223/320 (69.69%), Postives = 257/320 (80.31%), Query Frame = 1
BLAST of Lsi04G002850 vs. TrEMBL
Match: D7T986_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g03120 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 5.9e-119 Identity = 215/289 (74.39%), Postives = 247/289 (85.47%), Query Frame = 1
BLAST of Lsi04G002850 vs. TrEMBL
Match: M5Y1J2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016117mg PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 5.9e-119 Identity = 216/283 (76.33%), Postives = 246/283 (86.93%), Query Frame = 1
BLAST of Lsi04G002850 vs. TAIR10
Match: AT1G29700.1 (AT1G29700.1 Metallo-hydrolase/oxidoreductase superfamily protein) HSP 1 Score: 408.3 bits (1048), Expect = 5.1e-114 Identity = 222/360 (61.67%), Postives = 261/360 (72.50%), Query Frame = 1
BLAST of Lsi04G002850 vs. NCBI nr
Match: gi|659091457|ref|XP_008446561.1| (PREDICTED: uncharacterized protein LOC103489256 [Cucumis melo]) HSP 1 Score: 588.6 bits (1516), Expect = 7.8e-165 Identity = 305/353 (86.40%), Postives = 317/353 (89.80%), Query Frame = 1
BLAST of Lsi04G002850 vs. NCBI nr
Match: gi|449434654|ref|XP_004135111.1| (PREDICTED: uncharacterized protein LOC101203294 [Cucumis sativus]) HSP 1 Score: 587.4 bits (1513), Expect = 1.7e-164 Identity = 303/353 (85.84%), Postives = 317/353 (89.80%), Query Frame = 1
BLAST of Lsi04G002850 vs. NCBI nr
Match: gi|1009155355|ref|XP_015895668.1| (PREDICTED: uncharacterized protein LOC107429489 [Ziziphus jujuba]) HSP 1 Score: 443.0 bits (1138), Expect = 5.3e-121 Identity = 222/321 (69.16%), Postives = 264/321 (82.24%), Query Frame = 1
BLAST of Lsi04G002850 vs. NCBI nr
Match: gi|645276213|ref|XP_008243180.1| (PREDICTED: uncharacterized protein LOC103341443 isoform X1 [Prunus mume]) HSP 1 Score: 442.2 bits (1136), Expect = 9.0e-121 Identity = 236/354 (66.67%), Postives = 277/354 (78.25%), Query Frame = 1
BLAST of Lsi04G002850 vs. NCBI nr
Match: gi|823211715|ref|XP_012438644.1| (PREDICTED: uncharacterized protein LOC105764563 [Gossypium raimondii]) HSP 1 Score: 442.2 bits (1136), Expect = 9.0e-121 Identity = 217/287 (75.61%), Postives = 247/287 (86.06%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |