Lsi04G002740 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi04G002740
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr04 : 2791309 .. 2795353 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGTGGGCTCTTCGAGGCTCTTCAAATGTTGGTGATAGAAGAGGAGAGAAGGGAGAAAAAGAGTGAAGAAAATATGTGAGAGGTGAGAGATATGACATGTGGGAAGAAGTTTGGAAATGAAGGTTCATTCTACAAGTGGCATTGCCCTTGGGATGAGATTAATCTTCTTCCCAGCCGTTGTTTTTGTATTCTGTTTTCTCTTTCTAGAATATATTTCAAATTTCAAATTCTTTATTGCTTAGATGAACAAGGACAAATGAAGCACTTTATGTCCAATTTTTCATATTTTTCTACTATTTATTTGTTTGCTAATTCTAAAACATTGATCTAATAGACATGTCATACCAACATTCTAGAGACAAACTCATAATTTAAAGATCGGAAACGTGGCAAGATGTATTTAAATTTTAGGAGTTAAATATATATAACCATAATAAGAATTAAATATATATAACCATCGAAATTCAGGAAATAAATTTATGATGTAATCTTATTAAAAATAATGGGGAAAAAAGAAAGAAAGAGAAGACATGACCTCTTACAATGGCTAATGCTACACAAGAAAAAGCAAGCGCCTTTTCACCAATGTGCAACATCAAAGACTAAAAGGGATAGGGGAATTTGCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCCCCAACCAATATCCATTGTCATAAAGTTGGCACTTATCCTTTCAGGAAGTGAGGGCCCCAAGTTTGTCCTTAGTTTCACTTCATTATCACCCTTAGTGTCGCATCAGCCATCCACTAATGTAGAGTCAGTCCTCCTTCTCAAAGAGTAAGGTTTCTTTCCAGTTGTGCATCTAAAAGGGTGAGACGAAAAAAAGCAGAGACAATTTCATTGCTGCCTAAAAAGTTTGCTGCCCTAGAAGACAAGAGCTTAAGAAAAGTACAGAAGAGCTCAAAAACGGTGAGTGAAAATTTTGACCAATCACATTGATTCTTGACAGTGGAGTCTTATGTAATAAGATTGAGATGGCGGTTACTACGACAAGAAGAGCAGAAGAAGTGGGGCAATTATTCGAAACTTCTTTAGAATATTGTCTTTAACTGTAAGAGCTAATCCCTATCTTAACGGTTGGAATAACAAGTGTCTCAATTGATGATAGTCATGATCGAATCTAGTCCCTTGATTTGGTAAGTGCTTGAGTAACATGTTTCAATTTCCATGAGATGGCTACTTGGGACATCATGGTAGTTGATATGAGGAAGAGATGTATATTTAAGTCCAAGTCTAGGCATCTAAATTGATAAAAACATCCCTTGGAATAATTTTTTTTTTTCATCCAAGCAGTGGACACGTGGCTTAGATGCCACATGATGAAGAGAATTGGTAAAAGGACGACAAACAGAACTGAATTGGTCATCTGTTCTTAGCTAAAGCCTAAAGCTACAGTTCCAGTTTATTTCTTCCTGTGGGAACTGCATCTCACCGGTGGAGGGTCAACACGGAATGCAGCTTTACTATTTTCCTTTTGCTTTCCATCTTTGAAAAATTGCAAAGGTTTGTAAAGGGTACGAGTCAGAGAAGAGATATAATCTATATTCACATAGGACATTCCAAATTGCAAGCTTGAATAAGATTCCAACTTGTACAGTAATCTCTATTGAGGTATATAAATATTAAACGTAGTGATAAATCTGATAAGAATTCTCTCTCTTTTCTTTGAGGAAAAAACAAAAACTGAAAAAAGTCTTCTTTTTTGTACAAATTCTACTGAAGCTATGCACACAAGAAGTCCTTGATATGATCAATCATTTCAAGGGTCCGAGTTTGTGAGAGTTGTGACTTGTTCAGAACCTGAAACGCATGGCCAACTCCTTCATAAACCACATAATTGATCAGCTTACCGGCTCTATGTAAAGCAGAGCAAAACTCCAAGTTCCTATCTTTCAATATGTCCAATTCTGATATACATATCAAACTAGGCAAAACCCTCAAATCCTCCACCTTAAACAATCCTTTTGCCGAAGGATTGCACCATGGGTGGTCACGGTTTGTCCCGGAAGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCAACGTCAGTGGCGAACGAGGAGGTTGGACAAGAAACTTCTCTGACTTGGTCCTTGACTCTCCACCAAAAAATGGTTGTATCAAAATGTTACCTTTAACAACTAACGGCTTCAAGACCACAGCTCCAGAAGCAGTGGTCTTACCACCAAGTCCGGCGGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCACTAAGGTAGATTTTGGTAAAGTCGCAGTATCTTGACCACCAATTCTGCTTGGCCCCTACAAAAGCAACTTGTTTCAACCACTGAAGGGTCTTTAATCCATCTTCATAAGGAGCTGGAAGAGGGTTTTCTGGAGCCAAACGATAATTCACAGACATAATTATACAGTCGGCTTTTGCAGATAGCTTAGCCAGGAACTCATGGTAGCAACTCCAAGCGGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAATCAAAGGCAGCTTCTCCTGGCACTGTGTTGGAATATAGAAACGAGCCCAAATGTTGGTCAGTTTATCCACAACTACATCCCAAGAAGTAACACCGAGCTCTGGCGGCAATGCATTAGAGACACATGGAACTATTTGGGGTCTTTCCACATACCCATTTCCGTAAACTCTAATCAGGCCATCAATCTCCTCAACCAACACGTCATGTTGATTAAAGCCATTACCATGTTCTTCAAAACTTGGAATTTGATCTAGGTTAATGGTAGGCATTCTTTTTGTCCTCATAGAACAGGGATGGAGATGAGAGTCGATGCAGAAATTAAAGTCGGAGGCTTTTGAGAGTACAATTGATTATGGAACGAAGTATGAACTTCTGACGCTCCTTATATAGATGATGAAAAGATGTCTCGCGGTATGACGTGGACAGCTATTCTATCAAGTTGGAGGCTGGGAGGGATATTATCCTTTCTTTTCCTGCCAAGTGGGCAATTGGCTGAGTGCCACATGTTTTGACATTACATTGATTCAAGCACAATAAGCTAGAGCAAGGACTTCTCTACTTTTTCTCCTTTATTTTGTAGGAATGATGTATAAAAGGTGAGATTCACATGTTTTAGTATATGCTGTATTCAAATTACGATAACAGAAAAAAAAATATATACGTATACTAATTAATAATGCAAAGATAAAAAAGATGGTGTGAAAAGATGTAAATAATAAAGTGAGGCCTACAGTTCTAGAATGCAATGCTTTTCCAGTCCCACTTACGACTTTTTGAAATGGCTCACTTTGAATGCGCTTTGTCTGAAAAGCAAAGTCTGACTTACCTAGCAGTGGTGTGTATTCTCGGATTGGTGGGTTGTTATGGCCTACTGCCACCCCCATTGGAAAGCTCCATCATTAATGTGTGCTTAAAGTTCAAGCACAAGAGAAACATGTCATGTTGCTTGTCTGACTTCAATTCATCGTAACTTTTAGACTCTTATTGCATCTTTAAACGCTTTAAAAATTTAGAAAAAGAAAAGAAATTACCTGGAACATAATTAATACCAATGTCGCGTCTATTGCGCAGCCACCACGGCCAACACGCTATAAGAACTGTTGCTGAACATGCACCAGCCATCACAATTGTTGCCCCCCAGAAAGAACTTCGGTACCCATAA

mRNA sequence

ATGGAAGGAAGTGAGGGCCCCAAGTTTGTCCTTAGTTTCACTTCATTATCACCCTTAGTGTCGCATCAGCCATCCACTAATGTAGAGTCAGTCCTCCTTCTCAAAGATTGTGCATCTAAAAGGGTGAGACGAAAAAAAGCAGAGACAATTTCATTGCTGCCTAAAAAGTTTGCTGCCCTAGAAGACAAGAGCTTAAGAAAAGTACAGAAGAGCTCAAAAACGCTAAAGCCTAAAGCTACAGTTCCAGTTTATTTCTTCCTGTGGGAACTGCATCTCACCGGTGGAGGCTTACCGGCTCTATGTAAAGCAGAGCAAAACTCCAAGTTCCTATCTTTCAATATGTCCAATTCTGATATACATATCAAACTAGGCAAAACCCTCAAATCCTCCACCTTAAACAATCCTTTTGCCGAAGGATTGCACCATGGGTGGTCACGGTTTGTCCCGGAAGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCAACGTCAGTGGCGAACGAGGAGGTTGGACAAGAAACTTCTCTGACTTGGTCCTTGACTCTCCACCAAAAAATGGTTGTATCAAAATGTTACCTTTAACAACTAACGGCTTCAAGACCACAGCTCCAGAAGCAGTGGTCTTACCACCAAGTCCGGCGGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCACTAAGCCAGGAACTCATGGTAGCAACTCCAAGCGGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAATCAAAGGCAGCTTCTCCTGGCACTGTGTTGGAATATAGAAACGAGCCCAAATGTTGGTCAGTTTATCCACAACTACATCCCAAGAAGTAACACCGAGCTCTGGCGGCAATGCATTAGAGACACATGGAACTATTTGGGGTCTTTCCACATACCCATTTCCGTAAACTCTAATCAGGCCATCAATCTCCTCAACCAACACGTCATGTTGATTAAAGCCATTACCATCCACCACGGCCAACACGCTATAAGAACTGTTGCTGAACATGCACCAGCCATCACAATTGTTGCCCCCCAGAAAGAACTTCGGTACCCATAA

Coding sequence (CDS)

ATGGAAGGAAGTGAGGGCCCCAAGTTTGTCCTTAGTTTCACTTCATTATCACCCTTAGTGTCGCATCAGCCATCCACTAATGTAGAGTCAGTCCTCCTTCTCAAAGATTGTGCATCTAAAAGGGTGAGACGAAAAAAAGCAGAGACAATTTCATTGCTGCCTAAAAAGTTTGCTGCCCTAGAAGACAAGAGCTTAAGAAAAGTACAGAAGAGCTCAAAAACGCTAAAGCCTAAAGCTACAGTTCCAGTTTATTTCTTCCTGTGGGAACTGCATCTCACCGGTGGAGGCTTACCGGCTCTATGTAAAGCAGAGCAAAACTCCAAGTTCCTATCTTTCAATATGTCCAATTCTGATATACATATCAAACTAGGCAAAACCCTCAAATCCTCCACCTTAAACAATCCTTTTGCCGAAGGATTGCACCATGGGTGGTCACGGTTTGTCCCGGAAGGCAATGCCAACCGCCAGTACGTATCAGAAACTGCCAACGTCAGTGGCGAACGAGGAGGTTGGACAAGAAACTTCTCTGACTTGGTCCTTGACTCTCCACCAAAAAATGGTTGTATCAAAATGTTACCTTTAACAACTAACGGCTTCAAGACCACAGCTCCAGAAGCAGTGGTCTTACCACCAAGTCCGGCGGCTACATTGAAGGCTATGTTGCCACCGGCACTATCACCACTAAGCCAGGAACTCATGGTAGCAACTCCAAGCGGCCGAGCCGACACAAAACCCACCTCCATGGAAATATACAATCAAAGGCAGCTTCTCCTGGCACTGTGTTGGAATATAGAAACGAGCCCAAATGTTGGTCAGTTTATCCACAACTACATCCCAAGAAGTAACACCGAGCTCTGGCGGCAATGCATTAGAGACACATGGAACTATTTGGGGTCTTTCCACATACCCATTTCCGTAAACTCTAATCAGGCCATCAATCTCCTCAACCAACACGTCATGTTGATTAAAGCCATTACCATCCACCACGGCCAACACGCTATAAGAACTGTTGCTGAACATGCACCAGCCATCACAATTGTTGCCCCCCAGAAAGAACTTCGGTACCCATAA

Protein sequence

MEGSEGPKFVLSFTSLSPLVSHQPSTNVESVLLLKDCASKRVRRKKAETISLLPKKFAALEDKSLRKVQKSSKTLKPKATVPVYFFLWELHLTGGGLPALCKAEQNSKFLSFNMSNSDIHIKLGKTLKSSTLNNPFAEGLHHGWSRFVPEGNANRQYVSETANVSGERGGWTRNFSDLVLDSPPKNGCIKMLPLTTNGFKTTAPEAVVLPPSPAATLKAMLPPALSPLSQELMVATPSGRADTKPTSMEIYNQRQLLLALCWNIETSPNVGQFIHNYIPRSNTELWRQCIRDTWNYLGSFHIPISVNSNQAINLLNQHVMLIKAITIHHGQHAIRTVAEHAPAITIVAPQKELRYP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G002740.1Lsi04G002740.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G002740CmoCh04G016000Cucurbita moschata (Rifu)cmolsiB675
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G002740Silver-seed gourdcarlsiB539
Lsi04G002740Silver-seed gourdcarlsiB766
Lsi04G002740Silver-seed gourdcarlsiB767
Lsi04G002740Silver-seed gourdcarlsiB953
Lsi04G002740Cucumber (Chinese Long) v3cuclsiB063
Lsi04G002740Cucumber (Chinese Long) v3cuclsiB060
Lsi04G002740Cucumber (Chinese Long) v3cuclsiB393
Lsi04G002740Watermelon (97103) v2lsiwmbB282
Lsi04G002740Watermelon (97103) v2lsiwmbB284
Lsi04G002740Watermelon (97103) v2lsiwmbB294
Lsi04G002740Wax gourdlsiwgoB356
Lsi04G002740Wax gourdlsiwgoB380
Lsi04G002740Bottle gourd (USVL1VR-Ls)lsilsiB103
Lsi04G002740Bottle gourd (USVL1VR-Ls)lsilsiB138
Lsi04G002740Cucumber (Gy14) v1cgylsiB340
Lsi04G002740Cucumber (Gy14) v1cgylsiB465
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB058
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB123
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB379
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB669
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB675
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB682
Lsi04G002740Cucurbita maxima (Rimu)cmalsiB683
Lsi04G002740Cucurbita moschata (Rifu)cmolsiB046
Lsi04G002740Cucurbita moschata (Rifu)cmolsiB364
Lsi04G002740Cucurbita moschata (Rifu)cmolsiB660
Lsi04G002740Cucurbita moschata (Rifu)cmolsiB668
Lsi04G002740Cucurbita pepo (Zucchini)cpelsiB032
Lsi04G002740Cucurbita pepo (Zucchini)cpelsiB352
Lsi04G002740Cucurbita pepo (Zucchini)cpelsiB364
Lsi04G002740Cucurbita pepo (Zucchini)cpelsiB549
Lsi04G002740Wild cucumber (PI 183967)cpilsiB054
Lsi04G002740Wild cucumber (PI 183967)cpilsiB057
Lsi04G002740Wild cucumber (PI 183967)cpilsiB372
Lsi04G002740Cucumber (Chinese Long) v2culsiB054
Lsi04G002740Cucumber (Chinese Long) v2culsiB368
Lsi04G002740Melon (DHL92) v3.5.1lsimeB281
Lsi04G002740Melon (DHL92) v3.5.1lsimeB288
Lsi04G002740Melon (DHL92) v3.5.1lsimeB294
Lsi04G002740Watermelon (Charleston Gray)lsiwcgB283
Lsi04G002740Watermelon (Charleston Gray)lsiwcgB293
Lsi04G002740Watermelon (97103) v1lsiwmB312
Lsi04G002740Watermelon (97103) v1lsiwmB329
Lsi04G002740Watermelon (97103) v1lsiwmB341
Lsi04G002740Cucumber (Gy14) v2cgyblsiB049
Lsi04G002740Cucumber (Gy14) v2cgyblsiB337
Lsi04G002740Melon (DHL92) v3.6.1lsimedB297
Lsi04G002740Melon (DHL92) v3.6.1lsimedB307