Lsi04G001670 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGGCAGCATCGTTGGTGCGTTCAGTGAATATAGGAGTGGGCAAAAGCGCGAGTTTAGCAGTGCTTTTGGAGCGAGTGCTTTTGCAGAGAAGCACTGAGCTTAGAAGGGTAGCGAGGGAATCTGAAATTTTTGTTTCTTCTTCTTCTTCCTCTCATTGAGGACCGAATTTTGAAGCCAATGGCCTCTTCTTCTTCCTTCTGAACAAATTACAGCAGCAAAAAAGGCAAGGTAAGGCGACCCAACCGAACCAAATGCAAGAAAATGCCAAAACTCAAATTAAAACTTCATGGTTCTTTCAAATTCTTATGAAAATTCGAAACCCCTCGTTTTCTTTTTGGTTCCCCACTTGAAAATGCTTTCCAAGAACTTCTGGGTTCTCTTTGTTATTCTTTTATTTTTTTAATTTTCTCTGGGGTTTCTGTCTTTTTCGCTGTTCATTTTCGATTTTACTTTCTATCTTTTTCTACAGTGTGGATCGTTTTTCAGTGCGGTCTCACTGTTCGATTGTGATTTCTCTTAGTTCTTTGAAAATGCTTGATGCAGCTTGTTTTTCTTAGTTGCATTGGTAAATGCAGACCTCAATACCTCATGGCTTTTCAAGTTGTGGGGCTCTAAATTTTGAGTGAATTTTATAGGTAATGATGTTTGGTGGCTGAGAAAATGCGAGAAAGTGAAAGAAAAACACCATTTCGAGAGTTTATTGGGCTTTAGCTGGTGGTAAAGACTGGATAAAACTAACAGAAAAACGAAAAGATAAGAGTGGTTTGACATCTTTTACATTGTTCACTGTTCTTTGGCTGCAAATCTTAGGGCTGTTTCTCCCCCCATTCTCTAATCGTCTTAAGAAACAACCTCGGGATCTTTCTGAATCTTTTATTTTGTGGGTCTGTATAGTTTTCATGAGAAGTTTGAATAGTCGTGTAGAATGGAATGAAATTCTTTGTTGTTTTAGCTCTGGAGAAGTGTGAATGAAGTTTTCAATTGAAAACGTTTGATACATCTTTTCTGCAGATTTTGGGTCATTTTCTTCTCTTGTCGTGAAGTTTATTTTTCTAACTGCTTTTTGTCCTACACTAAAATTTAATTGTTGTTTGTTTTCCCCCGTGATTTCGGCTGTTATAAGCTGGTGAAAATATTTAATAAAGATTTTTCTGCCAGGAAGATGTTTACTTTTCATATTGTCTTTTTCGTTTCCAACCAAAAACTTACACTTTTAAAAGCCAAGAAAGAGGCTGATGCTGATGGGAAACTTGTGATATAGTCCAGTAACTCACCATGTCAACAAGGCAAACTCACCTTCCTCCTCGTCCTCGTTGCCCGATTCAAAAGAAAACAATTGCTGGTCCAATTACTGGTTCCATTGCACCAACCCCACTTGTTAATGAATTCTCTCTGCATCATGATAATTCTTCTTCACTAAGTTCTGTGTTGGAGGATGAGCCTGTATGGCTTGGTGAATTATTAAGCGACCGTGAATCAAATTCCATAGGACAACCGCTTCGACGCTCAGCTAGTGACTCTGTCACCCTTCTGGATGGTCTTGCAGACTCATTGAGGAGTCTGTGTATTGCCAAAGATGTGGAGAATTCAGTTGGAAATGAAACTTGTGAACAATGGGATCCATTGTGCACTTATGGCCCCAACTCACCTAGGAGAAAATGCAGTTCGGACTTTTCAAACTACAGTATGGTTTCAGCATTATCAGAATTTGTTCATCTTCACCATGCTGCTCCAGTGCACGCAGATGTTTGTTCCTTTGCTGAGAACTCTTCTTCAAATTTGAATGGAAACATTAGTGAATCAGTTAGGGATGTCAACTCAGATGAAAATGCAGCGAAACGGTTAGATTCTGAAATTTTATTGTCTTTGGCATTTGCCCCCTAGTATCCCGTTCCAAATATACTGCTGTTACTGTTGACAATTGATACCAATGTTGATATTTGATGAAACATTGACATGTTGCATCTGTTATTGATATGATAATGTAACTATATTACGTAGGAGCTAAACTATATTGTGAAGCTCCACCCAACATGTCAAAGAAAAGAGAGCTTGTCTTTCTTAGTTTCTTATATCCGAAACATGGGCCAAGTATTCCTGCCTTTTTGCCTGTCATGCATGACAGGAATTTCAGTTCTCTTCTCTCTCTCTGCAATAGCTTTTTTGTCAAATTAAAATCTGTTATGCATTGTCCAATTTAAGACAGTGAAATGATGCCCCTTTTTATTTTTAGTAAACTCTTGAGCTTCCTGTTTTCAAGGATAAATCAAGGAAGCTTTTCTATTGCAATGTTCTGAGCTTGTATCTTTCTTTCTTCTTTCCCCCCTCCCCCACCTAGATTTTAAATAACAATAGTACTTGTTATTCATTTATACAGTTGAGTAATGGGATGCATGCCACAGTTATAATACACTAGTTGGCTATAAGTATTAAGTTCTAATCTTTAATACCGAAAGTGCTACAATCCCTTGTCTTTCATGTTTGTGAATGATTCTCTTTAATTTTTAATACGTCTGTTCAATGGCCACTTTTCATTATTCTAGTAACAGATGTCTAATTCCACTTTTGAAGATTTTTTGTTTCTTGTGAAGTAAGGTTGCTCTCACTAGAAACTATGCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTAATTTAGGCCAAGGTGGAAATCAGTTTCAATTAATGTTCAATGGCATAGAAAAACGGTTGGTCCTTTGAGTAGGAGTTTGGCTATTTATTTGTAAATTAGTTCTCGTTGCCTCAGTTATGGATGTACATAGAATAAGCTGTCTTGATGAGAGCAAGGACTTGTTCCCATTTTCATCTGTAAATGTGAATTAGTTGTTGCTCAGGAAACTTTCAGATACTGGAACACCTACTTTTGAAGTGATTTGCTGAAAAGAATTGAGAGATCATTCCGAGGAATATGATGTGATTTCTCATTAATGTATGTACGGATGAGGAAATGGAGTTTAATTCTTGAAATCCACTACTTTGATATGTAGATTTTGATATCCACGAGTATAACCTTGATCATTGCTTATCCTTATATAGGTGGTCAATGTTTCTATTTCCAAAAAGTAATGTGATGGGTACACGAGTCTAATGGTTTCCTTGCAGGCACAATGGGCAGCGATCAAGGGTTCGTAAGCTTCAGTACATTGCTGAACTGGAGAGGAAGGTTAATGTTCTCCAGGTAATCCCATTGGAAAATTTGGGGTAGCGTATGCTAACCAGTCCTTATTGGACTGATGATCCACATCCCATCCTTTTCAGATTTCTGGTCAATCTTTGCACTATTTTTTATTTATTAGAAACCTGGAGATGCAAAAGGAAAGAGAACCCAAGGGCCGAGGAAGAGAGACGCCCCTCCATAAAAAATAGCTACTTACAGAAACACCTAGAGAAGTGTATTTTTCGCACTATTAGACATATCAATCTAGTACTATAGTTTTGATTATTCCTAAATTTTAACTAGGGATGTTATTTGGGACCTAGTTAGAAATTTGCTTATTCTTGGTCTTCCACGTCCAAAGACTTCCCTAATTATTGTCTGATGAAAAATTTGCCAATTTTTGTAATCCCTTTGTTGAGGGTTCTCATCTCCCCTTATTGTACATCCTCTTTTGTTGGTGGAAATTTTTGTTTCTTATAAAAATAATAATAATTAAATAAGAAAGCATGGGCCACGTGTACCAAATGACTGATGTCTGTACGTTTCATCTTCATTGCTGCAGAATTATTATTTTTCTGCAGAGTGTTATTTGATAAGAAGGCTTGCTGTTCTTTCCTTTTCAGTGCTGCCATAAAAAATTTCCTCAGAAATACTGATGCTGTTCTCTTTTACATTCATAACATTTCTTGAGAAAAATATGATCCACAATTGAAAGCTTTCATCTCATCCTGCAGACAGTTGAATCACAGCTGGCAATAAGAGTTGCATCACTGCTTCAGGAACGGGTGGCATTATCAATGGAGAACAGCAAATTAAAGCAGCAGGTTGCAAGAGTTCGACGAGAAAAATTGACCTCAGAAGGTAACTTTGTTTGCACCTTTCTTCTCAAATTTTGTTCACTAGCAACCTGCAAGGAAGCAGTTGTCGAGAAATAG CGGCAGCATCGTTGGTGCGTTCAGTGAATATAGGAGTGGGCAAAAGCGCGAGTTTAGCAGTGCTTTTGGAGCGAGTGCTTTTGCAGAGAAGCACTGAGCTTAGAAGGGTAGCGAGGGAATCTGAAATTTTTGTTTCTTCTTCTTCTTCCTCTCATTGAGGACCGAATTTTGAAGCCAATGGCCTCTTCTTCTTCCTTCTGAACAAATTACAGCAGCAAAAAAGGCAAGGTAATGATGTTTGGTGGCTGAGAAAATGCGAGAAAGTGAAAGAAAAACACCATTTCGAGAGTTTATTGGGCTTTAGCTGGTGGTAAAGACTGGATAAAACTAACAGAAAAACGAAAAGATAAGAGTGGTTTGACATCTTTTACATTGTTCACTGTTCTTTGGCTGCAAATCTTAGGGCTGTTTCTCCCCCCATTCTCTAATCGTCTTAAGAAACAACCTCGGGATCTTTCTGAATCTTTTATTTTGTGGGTCTGTATAGTTTTCATGAGAAGTTTGAATAGTCGTGTAGAATGGAATGAAATTCTTTGTTGTTTTAGCTCTGGAGAAGTGTGAATGAAGTTTTCAATTGAAAACGTTTGATACATCTTTTCTGCAGATTTTGGGTCATTTTCTTCTCTTGTCGTGAAGTTTATTTTTCTAACTGCTTTTTGTCCTACACTAAAATTTAATTGTTGTTTGTTTTCCCCCGTGATTTCGGCTGTTATAAGCTGGTGAAAATATTTAATAAAGATTTTTCTGCCAGGAAGATGTTTACTTTTCATATTGTCTTTTTCGTTTCCAACCAAAAACTTACACTTTTAAAAGCCAAGAAAGAGGCTGATGCTGATGGGAAACTTGTGATATAGTCCAGTAACTCACCATGTCAACAAGGCAAACTCACCTTCCTCCTCGTCCTCGTTGCCCGATTCAAAAGAAAACAATTGCTGGTCCAATTACTGGTTCCATTGCACCAACCCCACTTGTTAATGAATTCTCTCTGCATCATGATAATTCTTCTTCACTAAGTTCTGTGTTGGAGGATGAGCCTGTATGGCTTGGTGAATTATTAAGCGACCGTGAATCAAATTCCATAGGACAACCGCTTCGACGCTCAGCTAGTGACTCTGTCACCCTTCTGGATGGTCTTGCAGACTCATTGAGGAGTCTGTGTATTGCCAAAGATGTGGAGAATTCAGTTGGAAATGAAACTTGTGAACAATGGGATCCATTGTGCACTTATGGCCCCAACTCACCTAGGAGAAAATGCAGTTCGGACTTTTCAAACTACAGTATGGTTTCAGCATTATCAGAATTTGTTCATCTTCACCATGCTGCTCCAGTGCACGCAGATGTTTGTTCCTTTGCTGAGAACTCTTCTTCAAATTTGAATGGAAACATTAGTGAATCAGTTAGGGATGTCAACTCAGATGAAAATGCAGCGAAACGGCACAATGGGCAGCGATCAAGGGTTCGTAAGCTTCAGTACATTGCTGAACTGGAGAGGAAGGTTAATGTTCTCCAGACAGTTGAATCACAGCTGGCAATAAGAGTTGCATCACTGCTTCAGGAACGGGTGGCATTATCAATGGAGAACAGCAAATTAAAGCAGCAGGTTGCAAGAGTTCGACGAGAAAAATTGACCTCAGAAGGTAACTTTGTTTGCACCTTTCTTCTCAAATTTTGTTCACTAGCAACCTGCAAGGAAGCAGTTGTCGAGAAATAG ATGTCAACAAGGCAAACTCACCTTCCTCCTCGTCCTCGTTGCCCGATTCAAAAGAAAACAATTGCTGGTCCAATTACTGGTTCCATTGCACCAACCCCACTTGTTAATGAATTCTCTCTGCATCATGATAATTCTTCTTCACTAAGTTCTGTGTTGGAGGATGAGCCTGTATGGCTTGGTGAATTATTAAGCGACCGTGAATCAAATTCCATAGGACAACCGCTTCGACGCTCAGCTAGTGACTCTGTCACCCTTCTGGATGGTCTTGCAGACTCATTGAGGAGTCTGTGTATTGCCAAAGATGTGGAGAATTCAGTTGGAAATGAAACTTGTGAACAATGGGATCCATTGTGCACTTATGGCCCCAACTCACCTAGGAGAAAATGCAGTTCGGACTTTTCAAACTACAGTATGGTTTCAGCATTATCAGAATTTGTTCATCTTCACCATGCTGCTCCAGTGCACGCAGATGTTTGTTCCTTTGCTGAGAACTCTTCTTCAAATTTGAATGGAAACATTAGTGAATCAGTTAGGGATGTCAACTCAGATGAAAATGCAGCGAAACGGCACAATGGGCAGCGATCAAGGGTTCGTAAGCTTCAGTACATTGCTGAACTGGAGAGGAAGGTTAATGTTCTCCAGACAGTTGAATCACAGCTGGCAATAAGAGTTGCATCACTGCTTCAGGAACGGGTGGCATTATCAATGGAGAACAGCAAATTAAAGCAGCAGGTTGCAAGAGTTCGACGAGAAAAATTGACCTCAGAAGGTAACTTTGTTTGCACCTTTCTTCTCAAATTTTGTTCACTAGCAACCTGCAAGGAAGCAGTTGTCGAGAAATAG MSTRQTHLPPRPRCPIQKKTIAGPITGSIAPTPLVNEFSLHHDNSSSLSSVLEDEPVWLGELLSDRESNSIGQPLRRSASDSVTLLDGLADSLRSLCIAKDVENSVGNETCEQWDPLCTYGPNSPRRKCSSDFSNYSMVSALSEFVHLHHAAPVHADVCSFAENSSSNLNGNISESVRDVNSDENAAKRHNGQRSRVRKLQYIAELERKVNVLQTVESQLAIRVASLLQERVALSMENSKLKQQVARVRREKLTSEGNFVCTFLLKFCSLATCKEAVVEK
BLAST of Lsi04G001670 vs. Swiss-Prot
Match: BZP06_ORYSJ (Basic leucine zipper 6 OS=Oryza sativa subsp. japonica GN=BZIP06 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.7e-08 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 1
BLAST of Lsi04G001670 vs. Swiss-Prot
Match: BZP02_ORYSJ (Basic leucine zipper 2 OS=Oryza sativa subsp. japonica GN=BZIP02 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.5e-08 Identity = 66/210 (31.43%), Postives = 97/210 (46.19%), Query Frame = 1
BLAST of Lsi04G001670 vs. Swiss-Prot
Match: BZP61_ARATH (Basic leucine zipper 61 OS=Arabidopsis thaliana GN=BZIP61 PE=1 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07 Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Lsi04G001670 vs. Swiss-Prot
Match: BZP19_ORYSJ (Basic leucine zipper 19 OS=Oryza sativa subsp. japonica GN=BZIP19 PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.7e-07 Identity = 35/72 (48.61%), Postives = 49/72 (68.06%), Query Frame = 1
BLAST of Lsi04G001670 vs. Swiss-Prot
Match: BZP34_ARATH (Basic leucine zipper 34 OS=Arabidopsis thaliana GN=BZIP34 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Lsi04G001670 vs. TrEMBL
Match: A0A0A0KRB5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G613480 PE=4 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 1.6e-121 Identity = 235/257 (91.44%), Postives = 242/257 (94.16%), Query Frame = 1
BLAST of Lsi04G001670 vs. TrEMBL
Match: M5WN96_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017576mg PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 1.1e-53 Identity = 132/259 (50.97%), Postives = 172/259 (66.41%), Query Frame = 1
BLAST of Lsi04G001670 vs. TrEMBL
Match: A0A067DTK2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g021792mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52 Identity = 126/257 (49.03%), Postives = 164/257 (63.81%), Query Frame = 1
BLAST of Lsi04G001670 vs. TrEMBL
Match: V4U4K4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10016047mg PE=4 SV=1) HSP 1 Score: 213.0 bits (541), Expect = 4.7e-52 Identity = 126/257 (49.03%), Postives = 164/257 (63.81%), Query Frame = 1
BLAST of Lsi04G001670 vs. TrEMBL
Match: B9HKN0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s01930g PE=4 SV=2) HSP 1 Score: 209.5 bits (532), Expect = 5.2e-51 Identity = 126/254 (49.61%), Postives = 164/254 (64.57%), Query Frame = 1
BLAST of Lsi04G001670 vs. TAIR10
Match: AT5G04840.1 (AT5G04840.1 bZIP protein) HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42 Identity = 113/264 (42.80%), Postives = 151/264 (57.20%), Query Frame = 1
BLAST of Lsi04G001670 vs. TAIR10
Match: AT1G35490.1 (AT1G35490.1 bZIP family transcription factor) HSP 1 Score: 68.6 bits (166), Expect = 7.2e-12 Identity = 63/211 (29.86%), Postives = 101/211 (47.87%), Query Frame = 1
BLAST of Lsi04G001670 vs. TAIR10
Match: AT3G58120.1 (AT3G58120.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 58.2 bits (139), Expect = 9.7e-09 Identity = 38/96 (39.58%), Postives = 61/96 (63.54%), Query Frame = 1
BLAST of Lsi04G001670 vs. TAIR10
Match: AT2G42380.2 (AT2G42380.2 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Lsi04G001670 vs. TAIR10
Match: AT1G58110.1 (AT1G58110.1 Basic-leucine zipper (bZIP) transcription factor family protein) HSP 1 Score: 53.5 bits (127), Expect = 2.4e-07 Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 1
BLAST of Lsi04G001670 vs. NCBI nr
Match: gi|659091795|ref|XP_008446736.1| (PREDICTED: probable transcription factor PosF21 isoform X2 [Cucumis melo]) HSP 1 Score: 453.8 bits (1166), Expect = 2.3e-124 Identity = 240/257 (93.39%), Postives = 246/257 (95.72%), Query Frame = 1
BLAST of Lsi04G001670 vs. NCBI nr
Match: gi|659091789|ref|XP_008446733.1| (PREDICTED: probable transcription factor PosF21 isoform X1 [Cucumis melo]) HSP 1 Score: 451.1 bits (1159), Expect = 1.5e-123 Identity = 239/256 (93.36%), Postives = 245/256 (95.70%), Query Frame = 1
BLAST of Lsi04G001670 vs. NCBI nr
Match: gi|659091799|ref|XP_008446739.1| (PREDICTED: probable transcription factor PosF21 isoform X4 [Cucumis melo]) HSP 1 Score: 451.1 bits (1159), Expect = 1.5e-123 Identity = 239/256 (93.36%), Postives = 245/256 (95.70%), Query Frame = 1
BLAST of Lsi04G001670 vs. NCBI nr
Match: gi|659091797|ref|XP_008446737.1| (PREDICTED: probable transcription factor PosF21 isoform X3 [Cucumis melo]) HSP 1 Score: 451.1 bits (1159), Expect = 1.5e-123 Identity = 239/256 (93.36%), Postives = 245/256 (95.70%), Query Frame = 1
BLAST of Lsi04G001670 vs. NCBI nr
Match: gi|449434526|ref|XP_004135047.1| (PREDICTED: basic leucine zipper 34 isoform X1 [Cucumis sativus]) HSP 1 Score: 443.7 bits (1140), Expect = 2.3e-121 Identity = 235/257 (91.44%), Postives = 242/257 (94.16%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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