Lsi04G000980 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G000980
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Major facilitator superfamily protein
Location	chr04 : 1118750 .. 1119270 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACATTAACCCACCTCCAAGAACATGGTGGCCGGCAGAGGAATCTCGAGGTACTCCGACATAAGGAGCATAGTCGTCCATGTCATCACTGGATGATGGTTTGTGATGTTCACTTCACTCTTGATCATGGCGGTAGCCGGAGCGGCGCACATATTCAGCCTATATTCGAGTGACATAAAATCTGTTTTGGGTTACAACCAAACGACTTTGAATTTGCTAAGCTTTTTCAAAGATTTGGGTGGAAATATCGGCATTTTGTCCGGGCTTATTAACGAGGTTACACTGCCATGGGTGGTTCTGTCCATCGGCGCCTTTCTAAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTCGACGGATCCCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAGTCTTTTGCTAATACGGGTTCTATGGTAACATTTGTCAAGAACTTTCTCGAAAATTGCGGTGTCGTTCTTGGTAAGTATTTTAATTATAAGTTTAGTTCC

mRNA sequence

AACATTAACCCACCTCCAAGAACATGGTGGCCGGCAGAGGAATCTCGAGGTACTCCGACATAAGGAGCATAGTCGTCCATGTCATCACTGGATGATGGTTTGTGATGTTCACTTCACTCTTGATCATGGCGCCGGAGCGGCGCACATATTCAGCCTATATTCGAGTGACATAAAATCTGTTTTGGGTTACAACCAAACGACTTTGAATTTGCTAAGCTTTTTCAAAGATTTGGGTGGAAATATCGGCATTTTGTCCGGGCTTATTAACGAGGTTACACTGCCATGGGTGGTTCTGTCCATCGGCGCCTTTCTAAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTCGACGGATCCCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAGTCTTTTGCTAATACGGGTTCTATGGTAACATTTGTCAAGAACTTTCTCGAAAATTGCGGTGTCGTTCTTGGTAAGTATTTTAATTATAAGTTTAGTTCC

Coding sequence (CDS)

ATGATGGTTTGTGATGTTCACTTCACTCTTGATCATGGCGCCGGAGCGGCGCACATATTCAGCCTATATTCGAGTGACATAAAATCTGTTTTGGGTTACAACCAAACGACTTTGAATTTGCTAAGCTTTTTCAAAGATTTGGGTGGAAATATCGGCATTTTGTCCGGGCTTATTAACGAGGTTACACTGCCATGGGTGGTTCTGTCCATCGGCGCCTTTCTAAATTTCTTTGGTTACTTTATGATTTGGCTCGCCGTTACTCGACGGATCCCCACCCCTAAAGTTTGGCAAATGTGTCTCTATATTTGTATTGGAGCCAATTCTCAGTCTTTTGCTAATACGGGTTCTATGGTAACATTTGTCAAGAACTTTCTCGAAAATTGCGGTGTCGTTCTTGGTAAGTATTTTAATTATAAGTTTAGTTCC

Protein sequence

MMVCDVHFTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLGKYFNYKFSS

Homology

[Close]

BLAST of Lsi04G000980 vs. TrEMBL
Match: A0A0L9U1Q6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g249900 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-50
Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 1


Query: 8   FTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVV 67
           F +   AGA ++FSLYS DIKS L Y+QTTLNLLSFFKDLGGN+G+LSGLINE+T PWVV
Sbjct: 30  FLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVV 89

Query: 68  LSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLEN 127
           L++G+ LNFFGYFMIWLAVT+RIP P+VWQMCLYICIGANSQSFANTGS+VT VKNF E+
Sbjct: 90  LAMGSILNFFGYFMIWLAVTKRIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPES 149

Query: 128 CGVVLG 134
            GVVLG
Sbjct: 150 RGVVLG 155

[Close]

BLAST of Lsi04G000980 vs. TrEMBL
Match: A0A0S3SLM8_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G026700 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 4.9e-50
Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 1


Query: 8   FTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVV 67
           F +   AGA ++FSLYS DIKS L Y+QTTLNLLSFFKDLGGN+G+LSGLINE+T PWVV
Sbjct: 30  FLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVV 89

Query: 68  LSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLEN 127
           L++G+ LNFFGYFMIWLAVT+RIP P+VWQMCLYICIGANSQSFANTGS+VT VKNF E+
Sbjct: 90  LAMGSILNFFGYFMIWLAVTKRIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPES 149

Query: 128 CGVVLG 134
            GVVLG
Sbjct: 150 RGVVLG 155

[Close]

BLAST of Lsi04G000980 vs. TrEMBL
Match: W9SAE4_9ROSA (Putative transporter MCH1 OS=Morus notabilis GN=L484_017025 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 1.9e-49
Identity = 98/120 (81.67%), Postives = 109/120 (90.83%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F LYSS+IK VLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLS+GA 
Sbjct: 42  AGATYMFGLYSSEIKEVLGYDQTTLNLLSFFKDLGSNVGVLSGLINEVTPPWVVLSVGAV 101

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           LNFFGYFMIWLAV++RI TPKVW MCLYICIGANSQSFANTGS+VT VKNF E+ GVVLG
Sbjct: 102 LNFFGYFMIWLAVSKRIATPKVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLG 161

[Close]

BLAST of Lsi04G000980 vs. TrEMBL
Match: A0A151TQ78_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_008310 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.2e-49
Identity = 97/126 (76.98%), Postives = 110/126 (87.30%), Query Frame = 1


Query: 8   FTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVV 67
           F +   AGA ++FSLYS DIKS L Y+QTTLNLLSFFKDLGGN+G+LSGLINE+T PWVV
Sbjct: 28  FLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVV 87

Query: 68  LSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLEN 127
           L++G+ LNFFGYFMIWLAVT+RIP P VW MCLYICIGANSQSFANTGS+VT VKNF E+
Sbjct: 88  LAMGSLLNFFGYFMIWLAVTKRIPKPHVWHMCLYICIGANSQSFANTGSLVTCVKNFPES 147

Query: 128 CGVVLG 134
            GVVLG
Sbjct: 148 RGVVLG 153

[Close]

BLAST of Lsi04G000980 vs. TrEMBL
Match: I1LEZ3_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G276800 PE=4 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 5.5e-49
Identity = 96/126 (76.19%), Postives = 110/126 (87.30%), Query Frame = 1


Query: 8   FTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVV 67
           F +   AGA ++FSLYS DIKS L Y+QTTLNLLSFFKDLGGN+G+LSGLINE+T PWVV
Sbjct: 62  FLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVV 121

Query: 68  LSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLEN 127
           L+IG+ LNFFGYFMIWLAVT++IP P VW MCLYIC+GANSQSFANTGS+VT VKNF E+
Sbjct: 122 LAIGSILNFFGYFMIWLAVTKKIPKPHVWHMCLYICLGANSQSFANTGSLVTCVKNFPES 181

Query: 128 CGVVLG 134
            GVVLG
Sbjct: 182 RGVVLG 187

[Close]

BLAST of Lsi04G000980 vs. TAIR10
Match: AT2G39210.1 (AT2G39210.1 Major facilitator superfamily protein)

HSP 1 Score: 191.8 bits (486), Expect = 2.9e-49
Identity = 90/120 (75.00%), Postives = 103/120 (85.83%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F +YS DIK  LGY+QTTLNLLSFFKDLG N+G+L+GL+NEVT PW +L IGA 
Sbjct: 35  AGATYMFGIYSGDIKETLGYDQTTLNLLSFFKDLGANVGVLAGLLNEVTPPWFILLIGAI 94

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           LNFFGYFMIWLAVT RI  P+VW MCLYIC+GANSQSFANTGS+VT VKNF E+ GVVLG
Sbjct: 95  LNFFGYFMIWLAVTERISKPQVWHMCLYICVGANSQSFANTGSLVTCVKNFPESRGVVLG 154

[Close]

BLAST of Lsi04G000980 vs. TAIR10
Match: AT2G28120.1 (AT2G28120.1 Major facilitator superfamily protein)

HSP 1 Score: 179.1 bits (453), Expect = 1.9e-45
Identity = 86/125 (68.80%), Postives = 101/125 (80.80%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F  YS DIKS LGY+QTTLNLL FFKDLG N+G+LSGLI EVT  W VL+IG+ 
Sbjct: 31  AGATYLFGTYSKDIKSTLGYDQTTLNLLGFFKDLGANVGVLSGLIAEVTPTWFVLTIGSA 90

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           +NF GYFMIWL VT ++  PKVWQMCLYICIGANSQ+FANTG++VT VKNF E+ GV+LG
Sbjct: 91  MNFVGYFMIWLTVTGKVAKPKVWQMCLYICIGANSQNFANTGALVTCVKNFPESRGVMLG 150

Query: 134 KYFNY 139
               Y
Sbjct: 151 LLKGY 155

[Close]

BLAST of Lsi04G000980 vs. TAIR10
Match: AT1G18940.1 (AT1G18940.1 Nodulin-like / Major Facilitator Superfamily protein)

HSP 1 Score: 110.5 bits (275), Expect = 8.4e-25
Identity = 56/134 (41.79%), Postives = 83/134 (61.94%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL---------- 73
           AG ++ F +YS+ +KS   Y+Q+TL+ +S FKD+GGN+G+LSGL+               
Sbjct: 23  AGGSYTFGIYSAILKSTQSYDQSTLDTVSVFKDIGGNVGVLSGLVYTAATFNRRRRDGRE 82

Query: 74  ----PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVT 133
               PWVV+ IGA LNF GYF++W +VT  I  P V  MCL++ I A S +F NT ++V+
Sbjct: 83  RRGGPWVVILIGAILNFTGYFLMWASVTGLIKRPPVPVMCLFMFIAAQSLTFLNTANVVS 142

[Close]

BLAST of Lsi04G000980 vs. TAIR10
Match: AT1G74780.1 (AT1G74780.1 Nodulin-like / Major Facilitator Superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-22
Identity = 54/136 (39.71%), Postives = 81/136 (59.56%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTL---------- 73
           +GA++ F +YS+ +KS   Y+Q+TL+ +S FKD+G N G+ SGL+               
Sbjct: 21  SGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVFSGLLYTYATSNRLRGRGGG 80

Query: 74  ------PWVVLSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSM 133
                 PWVVL++GA   F GYF+IW +VT  I  P V  MCL++ + A SQ+F NT ++
Sbjct: 81  IGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLMCLFMFLAAQSQTFFNTANV 140

[Close]

BLAST of Lsi04G000980 vs. TAIR10
Match: AT5G14120.1 (AT5G14120.1 Major facilitator superfamily protein)

HSP 1 Score: 101.3 bits (251), Expect = 5.1e-22
Identity = 49/120 (40.83%), Postives = 74/120 (61.67%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AG  ++F   S  IKS L YNQ  L+ L   KDLG ++G ++G ++E+   W  L +GA 
Sbjct: 30  AGIGYLFGSISPVIKSSLNYNQKELSRLGVAKDLGDSVGFIAGTLSEILPLWAALLVGAV 89

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
            N  GY  +WL VT R P   +W MC+ I +G N +++ NTG++V+ V+NF ++ G V+G
Sbjct: 90  QNLIGYGWVWLIVTGRAPILPLWAMCVLIFVGNNGETYFNTGALVSGVQNFPKSRGPVVG 149

[Close]

BLAST of Lsi04G000980 vs. NCBI nr
Match: gi|659091948|ref|XP_008446819.1| (PREDICTED: uncharacterized protein LOC103489435 [Cucumis melo])

HSP 1 Score: 211.5 bits (537), Expect = 9.9e-52
Identity = 104/120 (86.67%), Postives = 111/120 (92.50%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA 
Sbjct: 38  AGATYMFGLYSSDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAV 97

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           LNFFGYFMIWLAVTRRI TPKVWQMCLYICIGANSQSFANTGS+VT VKNF E+ GVVLG
Sbjct: 98  LNFFGYFMIWLAVTRRISTPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLG 157

[Close]

BLAST of Lsi04G000980 vs. NCBI nr
Match: gi|778706487|ref|XP_004142499.2| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus])

HSP 1 Score: 209.5 bits (532), Expect = 3.8e-51
Identity = 103/120 (85.83%), Postives = 110/120 (91.67%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F LYSSDIKSVLGY+QTTLNLLSFFKDLG N+G+LSGLINEVT PWVVLSIGA 
Sbjct: 38  AGATYMFGLYSSDIKSVLGYDQTTLNLLSFFKDLGANVGVLSGLINEVTPPWVVLSIGAV 97

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           LNFFGYFMIWLAVTRRI  PKVWQMCLYICIGANSQSFANTGS+VT VKNF E+ GVVLG
Sbjct: 98  LNFFGYFMIWLAVTRRISAPKVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLG 157

[Close]

BLAST of Lsi04G000980 vs. NCBI nr
Match: gi|920693124|gb|KOM36349.1| (hypothetical protein LR48_Vigan02g249900 [Vigna angularis])

HSP 1 Score: 205.3 bits (521), Expect = 7.1e-50
Identity = 98/126 (77.78%), Postives = 112/126 (88.89%), Query Frame = 1


Query: 8   FTLDHGAGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVV 67
           F +   AGA ++FSLYS DIKS L Y+QTTLNLLSFFKDLGGN+G+LSGLINE+T PWVV
Sbjct: 30  FLIMAAAGATYMFSLYSGDIKSALAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVV 89

Query: 68  LSIGAFLNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLEN 127
           L++G+ LNFFGYFMIWLAVT+RIP P+VWQMCLYICIGANSQSFANTGS+VT VKNF E+
Sbjct: 90  LAMGSILNFFGYFMIWLAVTKRIPRPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPES 149

Query: 128 CGVVLG 134
            GVVLG
Sbjct: 150 RGVVLG 155

[Close]

BLAST of Lsi04G000980 vs. NCBI nr
Match: gi|1009120187|ref|XP_015876786.1| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Ziziphus jujuba])

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-49
Identity = 98/120 (81.67%), Postives = 109/120 (90.83%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AGA ++F LYSSDIK VLGY+QTTLNLLSFFKD+G N+G+LSGLINEVT PWVVLS+GA 
Sbjct: 43  AGATYMFGLYSSDIKKVLGYDQTTLNLLSFFKDVGANVGVLSGLINEVTPPWVVLSMGAV 102

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           LNFFGYFMIWLAVTR+I TPKVW MC+YICIGANSQSFANTGS+VT VKNF E+ GVVLG
Sbjct: 103 LNFFGYFMIWLAVTRKIATPKVWHMCMYICIGANSQSFANTGSLVTCVKNFPESRGVVLG 162

[Close]

BLAST of Lsi04G000980 vs. NCBI nr
Match: gi|778706491|ref|XP_004142500.2| (PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus])

HSP 1 Score: 203.8 bits (517), Expect = 2.1e-49
Identity = 100/120 (83.33%), Postives = 108/120 (90.00%), Query Frame = 1


Query: 14  AGAAHIFSLYSSDIKSVLGYNQTTLNLLSFFKDLGGNIGILSGLINEVTLPWVVLSIGAF 73
           AG+ +IFSLYS+DIKS LGY+QTTLNLLSF KDLG NIG+LSGLINEVT PWVVLSIGA 
Sbjct: 38  AGSTYIFSLYSNDIKSTLGYDQTTLNLLSFSKDLGANIGVLSGLINEVTPPWVVLSIGAL 97

Query: 74  LNFFGYFMIWLAVTRRIPTPKVWQMCLYICIGANSQSFANTGSMVTFVKNFLENCGVVLG 133
           +NFFGYFMIWLA+T RI TPKVWQMCLYICIGANSQSFANTGSMVT V NF E+ GVVLG
Sbjct: 98  MNFFGYFMIWLAITNRISTPKVWQMCLYICIGANSQSFANTGSMVTCVMNFPESRGVVLG 157

The following BLAST results are available for this feature:

BLAST of Lsi04G000980 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Lsi04G000980 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0L9U1Q6_PHAAN	4.9e-50	77.78	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan02g249900 PE=4 SV=1	[more]
A0A0S3SLM8_PHAAN	4.9e-50	77.78	Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.08G026700 PE=...	[more]
W9SAE4_9ROSA	1.9e-49	81.67	Putative transporter MCH1 OS=Morus notabilis GN=L484_017025 PE=4 SV=1	[more]
A0A151TQ78_CAJCA	3.2e-49	76.98	Uncharacterized protein OS=Cajanus cajan GN=KK1_008310 PE=4 SV=1	[more]
I1LEZ3_SOYBN	5.5e-49	76.19	Uncharacterized protein OS=Glycine max GN=GLYMA_10G276800 PE=4 SV=2	[more]

BLAST of Lsi04G000980 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G39210.1	2.9e-49	75.00	Major facilitator superfamily protein	[more]
AT2G28120.1	1.9e-45	68.80	Major facilitator superfamily protein	[more]
AT1G18940.1	8.4e-25	41.79	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT1G74780.1	1.3e-22	39.71	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT5G14120.1	5.1e-22	40.83	Major facilitator superfamily protein	[more]

BLAST of Lsi04G000980 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091948\|ref\|XP_008446819.1\|	9.9e-52	86.67	PREDICTED: uncharacterized protein LOC103489435 [Cucumis melo]	[more]
gi\|778706487\|ref\|XP_004142499.2\|	3.8e-51	85.83	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus]	[more]
gi\|920693124\|gb\|KOM36349.1\|	7.1e-50	77.78	hypothetical protein LR48_Vigan02g249900 [Vigna angularis]	[more]
gi\|1009120187\|ref\|XP_015876786.1\|	2.1e-49	81.67	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Ziziphus jujuba]	[more]
gi\|778706491\|ref\|XP_004142500.2\|	2.1e-49	83.33	PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR010658	Nodulin-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G000980.1	Lsi04G000980.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 13..133 score: 1.9
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 14..133 score: 5.4
None	No IPR available	PANTHER	PTHR21576:SF40	SUBFAMILY NOT NAMED	coord: 14..133 score: 5.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G000980	MELO3C012396	Melon (DHL92) v3.5.1	lsimeB281

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G000980	Bottle gourd (USVL1VR-Ls)	lsilsiB152
Lsi04G000980	Cucumber (Gy14) v1	cgylsiB497
Lsi04G000980	Cucurbita maxima (Rimu)	cmalsiB279
Lsi04G000980	Cucurbita maxima (Rimu)	cmalsiB379
Lsi04G000980	Cucurbita maxima (Rimu)	cmalsiB669
Lsi04G000980	Cucurbita maxima (Rimu)	cmalsiB684
Lsi04G000980	Cucurbita moschata (Rifu)	cmolsiB268
Lsi04G000980	Cucurbita moschata (Rifu)	cmolsiB364
Lsi04G000980	Cucurbita moschata (Rifu)	cmolsiB660
Lsi04G000980	Cucurbita moschata (Rifu)	cmolsiB676
Lsi04G000980	Cucurbita moschata (Rifu)	cmolsiB750
Lsi04G000980	Cucurbita pepo (Zucchini)	cpelsiB032
Lsi04G000980	Cucurbita pepo (Zucchini)	cpelsiB151
Lsi04G000980	Cucurbita pepo (Zucchini)	cpelsiB365
Lsi04G000980	Cucurbita pepo (Zucchini)	cpelsiB352
Lsi04G000980	Wild cucumber (PI 183967)	cpilsiB372
Lsi04G000980	Cucumber (Chinese Long) v2	culsiB368
Lsi04G000980	Melon (DHL92) v3.5.1	lsimeB304
Lsi04G000980	Watermelon (Charleston Gray)	lsiwcgB283
Lsi04G000980	Watermelon (Charleston Gray)	lsiwcgB300
Lsi04G000980	Watermelon (97103) v1	lsiwmB289
Lsi04G000980	Watermelon (97103) v1	lsiwmB312
Lsi04G000980	Cucumber (Gy14) v2	cgyblsiB337
Lsi04G000980	Cucumber (Gy14) v2	cgyblsiB421
Lsi04G000980	Melon (DHL92) v3.6.1	lsimedB297
Lsi04G000980	Melon (DHL92) v3.6.1	lsimedB319
Lsi04G000980	Silver-seed gourd	carlsiB240
Lsi04G000980	Silver-seed gourd	carlsiB437
Lsi04G000980	Silver-seed gourd	carlsiB627
Lsi04G000980	Silver-seed gourd	carlsiB767
Lsi04G000980	Cucumber (Chinese Long) v3	cuclsiB393
Lsi04G000980	Watermelon (97103) v2	lsiwmbB284
Lsi04G000980	Watermelon (97103) v2	lsiwmbB300
Lsi04G000980	Wax gourd	lsiwgoB365
Lsi04G000980	Wax gourd	lsiwgoB387