Lsi03G022820 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi03G022820
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Transcription factor, putative
Location	chr03 : 33692591 .. 33698124 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCGCAGCACTTAGCAATATTCTATTTTATTTTATTTTATTTCAAAATTTAACCATCATCCTTTTTCTTTTCTAGACCCCCCTCCCCCCATTACCAACTACTGCACCCAACGCCGTTAGACGCCGCTCCTACACGACGCAGTCTCAGCGGCTGCCGCCGCACTCTCAACTGCCACAGTCTCCGCTTCTCGACGAATTCGCCAGGCACGGAAAACCCACGAAAGCAAGCCATATCTGGCGACGGTAGCGGTGACCCACAAGCAGCGGCGACACAATCTCAGACCTCCGGCGGTTCGAGACCCACGAGCACGACGTCTGGGCGGCGAATACCTCAGATCTGAGGTAGCTTCAGCGAACAACGACGCCCCAACGCATTCCTCGGGAGTTCGACAACCTTTGGCAACTACCCACAACCCGAACTACTTCGGATCCCATAGACCGTAGTGTTTAGATCTGTGAGTTCGAATTATTTTGATCACATTTCAGCGAGGACACAAGTCCTTTATAATAAGATTTGGGCAGTAACTATTCATTTAGACTCTTTCGAATTAGATTAGAGTGTTTTAAAGTATTTTCTAACCTCGAAACTCTTCTGTGTTTAGGTTCAGATTAGTCTCAGCTTGATTGAATTAAGGTTTAGGGTCGACTCCGGGTAAGAATAGTGGTAATCCTCTTGCCTTTTGGTTTTCGATCAAGGATTTCGAAGTGAGTTCTAAGCTCGAGTCTTGTTTTTGTTGTTTCAGGTGTCTATCGAACAGTTTAGGAGCGCTTTCAGACTTTCGTAAGTGGTCTCTCACTTGTGGAGCGTCGTTTCGTTGTATTTGCTTAAATATTGACTTGTTTGAATTCTTCGAATTATTAAAATGTTTGCCTTTGTATGGAATATGGATATTATGGCTATTTATTTACCATGCTTGGTTGTAGGGTCAGGTGGGTTATCCCATAAGATTAGTTGAGATGCGTGTAAGGTGGTTGAACACTCACAGATATTAGAAAAAAAAGATTTGATTTTCAAATTATAACTTCAGTTTATATACGAGTTTCTAGATTTTTGTAAGCCAAATGTGATTATGGTGATTCTCATCAAGGTTGTTGATCATTGATTTGTTGTCGATTTTTTGGTGTGGATTGGGAGCTCATGTTCCTTTTCTTTCGAGTTTTGTTGTGATCTTTCCAATAGGGAAACAATGGAGGTGGTTGCTCTTCGCTCTTTACTCTAGCGTCATCATTTTAGACTTGGGAGAAGAGATGTGAGGATTTGGATCCCTAATCCATTGGAGAGGTTCTCGTGTAAGTCTTTATTTCGTAATTTGATTGATCCTTCTCTCCTAGGTATGTCCGTTTTCTATATGTTTTGGAGGATTAAGATTTATAGGAAAGTGAGATACTTTACTTGGCAAGTCTTACACTATCGTGTTAACACGATGGATCGGCTCAAGAGGAAGTTGCTCTGGCTTATGGGTCTTTTCTGTTGTATTCTTTGTCGGAAGGTGGAGGAAGACCTGGACCATATTCTCTGCCGTTGTGAGTTTGCCAGCCTGATTTGGGATTCTTTGTTTTAGACTTTCGGCATTATGGTGGTGCGGGATAAAGATGTCAGAGCGTTGCTTGAGGAGTCCCTTCTTAACCAGCCTCGAGGGGAGAAGGGTCGCTTTCTTTGGTTTGTTGGGGATGTGTGCTATCTTGTGGGTGGTGTGGGGTGAGCAGAACAATAGGGTTTTTAGAGGTGTGGAGAGGGCCCCTAGCGAGATTTGGCCCTTGTTCGTTATCATGTTTCCTTGTGGGCTTCGACTTTGAAGACTTTTTGTAACTATTCTATAGGTGTTATTTTGCATAGTTAGACTCCCTTTCTTTAGAGGGTGCTCCCCTTTTTTTTGGGCTGGTTTTTTGGATGTCCATGTATTCTTTCATTTTTTTCTCTATGAAACCGATCATTCTTATATATAAAAAAAAGAGGTATTAATTCTAAATGATTATGATTTTAGTATGGGTCGAATATGTATTATTAGAAATTGGTTTTGAATCACTAGATTGTGTATCCATGGTGATTTCTCGATACAGTTATGTGAATATATTTTTGTAGTGTAGCTATGATATACTTGGGGTCTTTCAAACTTGCTTTGGCACACATATAGGCTTTTGGCAGCGTGTTGGGGTGTGAGGGGCTGCACTACACACGTATGACAAGTTGTTCTACTATATACCTTGAGATTACTTGATGCATAACATGACTACATCCTCTGTATACAATATGACTAGATTCACTTTGCTATGTATTAGGAGTTTGTTCTGCACATGGTATTACTAGTTTGCTTTATGCGTATTAAGATTACTCTATGCCAATATCGATAGTCTAGGTACAAATATAGTGATGAATTTTTCTCGCCAAGTGACTTTGTTCCAAAGATTACATTACGTTTTTTTTAAGATTGCATTTTTTGATTTTGTTATCTGAAATATTTCAAGTTGCTTATTTTGCTATATAATTTACAAATATTTCAAAATTTCTTCTGTAAGACTATCCATAAGCTATAACTGTTTATGGTTTTTCTTAAAATTATATTTTTATGAACTTTCACTACTCATTGGATTTCTTAGTTCATTTTTTCTCCTTTTCTCTAGGTAACATTTGAGTTTTCGATGAGCCTACTAGAGTTGATATCTGCCACTCCATAAGTTGCATGTTGTTTTGGGTGTGTACTACTTGTTGATACATTTTTGTAACTAGAGTAGCTAACATGTTTCCATTGACATTGTACTAATTTGAGTTTTATGTTGGTTTGTAAACTCAAACATGTATGCTTTTTCCTTCAGTTCTTTTTGGCCATATTATGGTTTTGGATTTCTGAATTGATGGCTGATTTGTGTGTGATAAGCTCACTTGGTGGTAGAATTGGAGTTTAAGATATAATCTTTTGGGAGTGTATATAAACTTGTGAATTTTGTTCAATAAAGTTTTTGCTAGGCACCTTTTGTTTTAGAAAATGCTTTAGTTTTTGTAAGTTGACAATGGACTCCCTTCGTTAGTTGTGATTTTATTGTTGACACATCAGTTAGGGTAGTCTAGGGCAGGGTGTGGATGACTTTAGCAATCTTAGTTGTTGTTTGAGAAAGAGAACTAGTTATTATATTTTCTCTGCTCCTTATATTCTTCTTTGTATCATGTCCTGTTTGCTTGACAAATTTTGACTGTGAATTTCCTGACTTGCCGAAGTTTATTTGATGTAATTCGGGATTTTGTTTTTGCATCTTGGATTTTGGTTATGTGAAATTCGTAGTATTGAGATTGAGGAATGGCTTTGAGGACTTGCATGAATGTGTTGTGTGGAGCATCCTCTTCAACCGAGTGGAGGAAAGGTTGGGCTCTACGATCTGGTGATTTTGCTACTCTTTGCGATAAGTGCGGGTAATTTTACCGATGCATTATATCTATTTAAATTTCGTAGAACACATTGGAAGTTCTTTTGAGGTTTATGCACTTTGCTTGGACTTTATCTTTACTACATATGTCCTCTCTCCCCTTCTCATTTTACGCAAGCTTTTGAAGTTTATTTGGCGTGCGGCTGACCAATAGGTTTATAGCTTAGTTGTTGTAGTCAGGATTTTTTTGCCATATTTGTACTTTCTGAGATTTATTGTCCACTTTTATTAATTGTTTTATAGCACGTACCACTAAAATAAGGATACTGGATTTCATGTCCTGCCTTGTGCACTTTTATCATTGGTACTTTATAACCATATATATTGAGTGTTTTGGTATAAATTTATTAAGCTAACAGTTCATAGATCCATTCTTTGGCCTCTATAAACAGCTTTCGGTCTGATTGGACTCAGTTAATAGACCCTTTTATTTTCTTGTCCATATGACTTTAAGACCACATAGTATAGAAGCTGGAGCCGTAGCCTCTGTTTGAGAAGCAACTCTAAGAGAGTACTCAATAGGCATAAATTAACCTCAAATTGTGGCTTTTACCAGCGAATAGTTTCTTTGTAATTTTTTTTTTCATATTTTCTGCATCAGCTGCATTTCCTTTTTGTTCTGCCTTATGCACCTAAAATTAAGAAATTTGACTAAATAAGTTTTATCATCTTATGTGTCAAAACAAAAGTTATGTATTTCTAATTGAACTTGAGATGCCAAACATGTCACATTAATGAACTGCTAATAGGTCTGCTTACGACCAGTCAATTTTCTGTGATGTGTTCCACTTAAAAGACTCTGGTTGGAGGGAGTGCGCCTCATGTGGCAAGGTAATCGGATTTGGCATAATCAATCCCTTTTCATTCCAATGCCTTCTCTTTCTTGCATGCTAGATTTTTATCAAATGAAATTTCATTGCAGCATCTTCATTGTGGATGCATTGCTTCCAAGTTTCTGATGGAGCTTCATGACGGTGGGGGGGTGAATTGCATAAGCTGTGCAAAAAATTTACTTCATACTGTAAGATCATACACCAGTATAACTCACTCATTAATATTGCAGCTTGCAAATAATTGTCTATAGCACAATATTTTAATAATCTACAGCTGCCTAATTTTTTTACTTCGAACATAGATTTGTGTTATATTCTTTCTTGCTCTAATCAGGATCCTACACTTAAAGCAATGTTTTGCATGTTATATAAATATTTAAGCATCTTTTGTATTTAATTTGACGGCATTCCCACTTGATTGAGTGATCCTTTTTTTCTGTTGCATCTTCCATGATTAAGCAATTGATATTTATAAATGAAATGGAATCCGTTTATTTTATTTAAATGAACCGCTGTCCGCTATATGAGTGTTGGATTATGTAATGTATACACCAAGACCATAATATTCTCTTATCCTTCCATCAACTATTCCTTCTTATCTGATGTATAGTTATGCTTATGAGATATATTCTTACAGACTAGTACTGGCGAAAAGTTGAATGGGCTTGGCACATCGCAAGTTCAAAATTCTGGTGATTTTCAATCATTTTTAGTGGAAGATGGTAACAGTCATAGACTAACACTCATCCAATCGGGAAACAAGACAGAGGGAAATGAGCTTAGACAATCACACCTATCTCAAAGTAATAACAATAATGTATCATTAGTTCAAATGAAACATGAAGAAAACTGTCCTTCAGTGAGAGATGTTGGCTATGTCTGTTCCTTGGAATCCACTCAGGTGACGAATGGGTTGAATGAAATTGCCAAACAGGAAATCTGCAAAGGAGACAGTGGAACAAAGTTTACTTATGATTCACTTGCTTTGGGCTGTGGTAACTCAAATCCTCTTCCTGGCGTTTCTATTGATGAAAAAGAGGATAGCAAGTCATCCTCTCCTTTGCTTCTAGGCTCTAGATCTCGTCATCTTATTCCGAAGCCTGCACGTTCAGTATTTAATGTAGGCTTAGAGCCAAATGCTAGCATGGTTTCACAAGTACGTGTTGCAAGGCCACCTGCAGAAGGGAGGGGGCGGAATCAGTTGCTTCCTCGATATTGGCCCAAGATTACTGACCAAGAACTGCAGCAGATATCTGGAGCGTATCCTTCCCTTTCATTTTAA

mRNA sequence

TGCGCAGCACTTAGCAATATTCTATTTTATTTTATTTTATTTCAAAATTTAACCATCATCCTTTTTCTTTTCTAGACCCCCCTCCCCCCATTACCAACTACTGCACCCAACGCCGTTAGACGCCGCTCCTACACGACGCAGTCTCAGCGGCTGCCGCCGCACTCTCAACTGCCACAGTCTCCGCTTCTCGACGAATTCGCCAGGCACGGAAAACCCACGAAAGCAAGCCATATCTGGCGACGGTAGCGGTGACCCACAAGCAGCGGCGACACAATCTCAGACCTCCGGCGGTTCGAGACCCACGAGCACGACGTCTGGGCGGCGAATACCTCAGATCTGAGGTAGCTTCAGCGAACAACGACGCCCCAACGCATTCCTCGGGAGTTCGACAACCTTTGGCAACTACCCACAACCCGAACTACTTCGGATCCCATAGACCGTAGTGTTTAGATCTGTTCAGATTAGTCTCAGCTTGATTGAATTAAGGTTTAGGGTCGACTCCGGGTAAGAATAGTGGTGTCTATCGAACAGTTTAGGAGCGCTTTCAGACTTTCTATTGAGATTGAGGAATGGCTTTGAGGACTTGCATGAATGTGTTGTGTGGAGCATCCTCTTCAACCGAGTGGAGGAAAGGTTGGGCTCTACGATCTGGTGATTTTGCTACTCTTTGCGATAAGTGCGGGTCTGCTTACGACCAGTCAATTTTCTGTGATGTGTTCCACTTAAAAGACTCTGGTTGGAGGGAGTGCGCCTCATGTGGCAAGCATCTTCATTGTGGATGCATTGCTTCCAAGTTTCTGATGGAGCTTCATGACGGTGGGGGGGTGAATTGCATAAGCTGTGCAAAAAATTTACTTCATACTACTAGTACTGGCGAAAAGTTGAATGGGCTTGGCACATCGCAAGTTCAAAATTCTGGTGATTTTCAATCATTTTTAGTGGAAGATGGTAACAGTCATAGACTAACACTCATCCAATCGGGAAACAAGACAGAGGGAAATGAGCTTAGACAATCACACCTATCTCAAAGTAATAACAATAATGTATCATTAGTTCAAATGAAACATGAAGAAAACTGTCCTTCAGTGAGAGATGTTGGCTATGTCTGTTCCTTGGAATCCACTCAGGTGACGAATGGGTTGAATGAAATTGCCAAACAGGAAATCTGCAAAGGAGACAGTGGAACAAAGTTTACTTATGATTCACTTGCTTTGGGCTGTGGTAACTCAAATCCTCTTCCTGGCGTTTCTATTGATGAAAAAGAGGATAGCAAGTCATCCTCTCCTTTGCTTCTAGGCTCTAGATCTCGTCATCTTATTCCGAAGCCTGCACGTTCAGTATTTAATGTAGGCTTAGAGCCAAATGCTAGCATGGTTTCACAAGTACGTGTTGCAAGGCCACCTGCAGAAGGGAGGGGGCGGAATCAGTTGCTTCCTCGATATTGGCCCAAGATTACTGACCAAGAACTGCAGCAGATATCTGGAGCGTATCCTTCCCTTTCATTTTAA

Coding sequence (CDS)

ATGGCTTTGAGGACTTGCATGAATGTGTTGTGTGGAGCATCCTCTTCAACCGAGTGGAGGAAAGGTTGGGCTCTACGATCTGGTGATTTTGCTACTCTTTGCGATAAGTGCGGGTCTGCTTACGACCAGTCAATTTTCTGTGATGTGTTCCACTTAAAAGACTCTGGTTGGAGGGAGTGCGCCTCATGTGGCAAGCATCTTCATTGTGGATGCATTGCTTCCAAGTTTCTGATGGAGCTTCATGACGGTGGGGGGGTGAATTGCATAAGCTGTGCAAAAAATTTACTTCATACTACTAGTACTGGCGAAAAGTTGAATGGGCTTGGCACATCGCAAGTTCAAAATTCTGGTGATTTTCAATCATTTTTAGTGGAAGATGGTAACAGTCATAGACTAACACTCATCCAATCGGGAAACAAGACAGAGGGAAATGAGCTTAGACAATCACACCTATCTCAAAGTAATAACAATAATGTATCATTAGTTCAAATGAAACATGAAGAAAACTGTCCTTCAGTGAGAGATGTTGGCTATGTCTGTTCCTTGGAATCCACTCAGGTGACGAATGGGTTGAATGAAATTGCCAAACAGGAAATCTGCAAAGGAGACAGTGGAACAAAGTTTACTTATGATTCACTTGCTTTGGGCTGTGGTAACTCAAATCCTCTTCCTGGCGTTTCTATTGATGAAAAAGAGGATAGCAAGTCATCCTCTCCTTTGCTTCTAGGCTCTAGATCTCGTCATCTTATTCCGAAGCCTGCACGTTCAGTATTTAATGTAGGCTTAGAGCCAAATGCTAGCATGGTTTCACAAGTACGTGTTGCAAGGCCACCTGCAGAAGGGAGGGGGCGGAATCAGTTGCTTCCTCGATATTGGCCCAAGATTACTGACCAAGAACTGCAGCAGATATCTGGAGCGTATCCTTCCCTTTCATTTTAA

Protein sequence

MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWRECASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNLLHTTSTGEKLNGLGTSQVQNSGDFQSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYVCSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQELQQISGAYPSLSF

Homology

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BLAST of Lsi03G022820 vs. Swiss-Prot
Match: VAL2_ARATH (B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL2 PE=2 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 1.1e-63
Identity = 142/316 (44.94%), Postives = 188/316 (59.49%), Query Frame = 1


Query: 2   ALRTCMNVLCGASSST-EWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 61
           +++ CMN LCGA+S++ EW+KGW +RSGD A+LCDKCG AY+QSIFC+VFH K+SGWREC
Sbjct: 3   SIKVCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWREC 62

Query: 62  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNLLHTTSTGEKLNGLGTSQVQNSGDFQ 121
            SC K LHCGCIAS+F+MEL + GGV CISCAK           L  +  S   N  DF 
Sbjct: 63  NSCDKRLHCGCIASRFMMELLENGGVTCISCAKK--------SGLISMNVSHESNGKDFP 122

Query: 122 SFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENC-PSVRDVGYV 181
           SF   +           G+  E   L+     Q  +   S +QMK EE+  PS       
Sbjct: 123 SFASAE---------HVGSVLERTNLKHLLHFQRIDPTHSSLQMKQEESLLPS------- 182

Query: 182 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNS---NPLPGVSIDEKEDSKS 241
            SL++ +      E++ Q              +L++  G +   +P    ++D++  SK+
Sbjct: 183 -SLDALRHKTERKELSAQP-------------NLSISLGPTLMTSPFHDAAVDDR--SKT 242

Query: 242 SSPLLLGSRSRHLIPKPARSV-FNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKI 301
           +S   L  RSR L+PKPA S     G+EP+ S+VSQ+ VARPP EGRG+ QLLPRYWP+I
Sbjct: 243 NSIFQLAPRSRQLLPKPANSAPIAAGMEPSGSLVSQIHVARPPPEGRGKTQLLPRYWPRI 278

Query: 302 TDQELQQISGAYPSLS 312
           TDQEL Q+SG YP LS
Sbjct: 303 TDQELLQLSGQYPHLS 278

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BLAST of Lsi03G022820 vs. Swiss-Prot
Match: Y7797_ORYSJ (B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os07g0679700 PE=2 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 5.5e-55
Identity = 136/352 (38.64%), Postives = 180/352 (51.14%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSST----EWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSG 60
           +A + CMN  CGA + +    EWRKGW LRSG FA LCDKCG AY+Q +FCD+FH K+SG
Sbjct: 12  VAAKRCMNAACGAPAPSPAGGEWRKGWPLRSGGFAVLCDKCGLAYEQLVFCDIFHQKESG 71

Query: 61  WRECASCGKHLHCGCIASKFLMELHDGGGVNCISCAKN------------LLHTTSTGEK 120
           WR+C+ CGK LHCGCIASK   +L D GGV C++C KN             L ++   ++
Sbjct: 72  WRDCSFCGKRLHCGCIASKNSFDLLDSGGVQCVTCIKNSAVQSVPSPVVPKLFSSQNNQR 131

Query: 121 LNGLGTSQVQNSGDFQSFLVEDGNSHRLTLIQSGN----------KTEGNELRQSHLSQS 180
           L G     +       S L+ D  +  LT+I   N              N LRQ  L   
Sbjct: 132 LFGKSDDLLSGRPLETSSLMVDARNDDLTIIAKNNLPFMVKNVEAGQSSNILRQKELENG 191

Query: 181 NNNNVSLVQMKHEENCPSVRDVGYVCSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLA 240
                   Q+K E    S+ D+G +  L  +Q  + L   ++++  K  +    T +SL+
Sbjct: 192 AR------QIKWELPTLSIGDMGRIPFLTRSQ--SALE--SRRDENKDPTTESTTSESLS 251

Query: 241 LGC--------GNSNPLPGVSIDE-------------KEDSKSSSPLLLGSRSRHLIPKP 300
             C         N N L   S  E             +E + + SP     R+RH + +P
Sbjct: 252 EACLNMSLGIASNGNKLEATSTVERPMLSPTTGFPEGRELTTALSPFQHAQRARHFLTRP 311

Query: 301 ARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQELQQISG 306
            R       +P   M+  +RVARPPAEGRGRNQLLPRYWP+ITDQELQQISG
Sbjct: 312 PRVGEGAVFDPTKDMLPHLRVARPPAEGRGRNQLLPRYWPRITDQELQQISG 353

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BLAST of Lsi03G022820 vs. Swiss-Prot
Match: VAL1_ARATH (B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=1 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.0e-45
Identity = 117/309 (37.86%), Postives = 159/309 (51.46%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           M  + CMN  CG +S+ EW+KGW LRSG  A LC +CGSAY+ S+FC+ FH   SGWREC
Sbjct: 6   MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCA-KNLLHTTSTGEKLNGLGTSQVQNSGDF 120
             C K LHCGCIASK  +EL D GGV C +CA  + L+  + GE           N G F
Sbjct: 66  YLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRGE-----------NPGVF 125

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
               ++     +    +SG + EG+   Q  +   +         K EE  P  R  G +
Sbjct: 126 SRLPMKTLADRQHVNGESGGRNEGDLFSQPLVMGGD---------KREEFMPH-RGFGKL 185

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
            S EST   + L+   +         +     SL +G   +   P  + +  E  K  SP
Sbjct: 186 MSPESTTTGHRLDAAGEMH------ESSPLQPSLNMGLAVNPFSPSFATEAVEGMKHISP 245

Query: 241 L---LLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKIT 300
               ++   + +++ KP+R    +   P AS  +Q R+ RPP EGRGR  LLPRYWPK T
Sbjct: 246 SQSNMVHCSASNILQKPSRPA--ISTPPVASKSAQARIGRPPVEGRGRGHLLPRYWPKYT 285

Query: 301 DQELQQISG 306
           D+E+QQISG
Sbjct: 306 DKEVQQISG 285

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BLAST of Lsi03G022820 vs. Swiss-Prot
Match: VAL3_ARATH (B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana GN=VAL3 PE=3 SV=3)

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-25
Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           ++ R C N  C        R GW LRSGDF  LCD+C SAY+Q  FCDVFH + SGWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAK 94
            SCGK +HCGCIAS     L D GG+ C++CA+
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACAR 104

[Close]

BLAST of Lsi03G022820 vs. Swiss-Prot
Match: Y7633_ORYSJ (B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os07g0563300 PE=3 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.8e-21
Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 1


Query: 4   RTCMNVLC-GASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWRECAS 63
           R C N  C    S    R+GW LR+GDFA LCD+C  +++   FC+ FHL+ +GWR C S
Sbjct: 81  RICFNAHCKDPKSDGPRRRGWRLRNGDFAELCDRCYHSFEHGGFCETFHLEVAGWRNCES 140

Query: 64  CGKHLHCGCIASKFLMELHDGGGVNCISCAKNLLHTTSTGEKLNGLGTSQVQNSGD 119
           CGK LHCGCI S       D GGV C+ CA+   H      ++        QN  D
Sbjct: 141 CGKRLHCGCIVSVHAFVHLDAGGVECVMCARK-SHAAMAPSQIWSSSMHMAQNVAD 195

[Close]

BLAST of Lsi03G022820 vs. TrEMBL
Match: A0A0A0LCL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G728060 PE=4 SV=1)

HSP 1 Score: 578.6 bits (1490), Expect = 4.7e-162
Identity = 284/307 (92.51%), Postives = 288/307 (93.81%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           MALRTCMNV C ASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCD+FHLKDSGWREC
Sbjct: 1   MALRTCMNVSCRASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDIFHLKDSGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SCGKHLHCGCIASKFLMELHD GGVNCISCAK+L LHTTST EKLNGLGTSQVQNSGD 
Sbjct: 61  TSCGKHLHCGCIASKFLMELHDSGGVNCISCAKSLGLHTTSTSEKLNGLGTSQVQNSGDL 120

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
           QSFLVEDGN+ R+TLIQSGNK EGNELRQSHLS SNN NVSLVQMKHEENCPSVRDVGYV
Sbjct: 121 QSFLVEDGNNDRITLIQSGNKAEGNELRQSHLSPSNNKNVSLVQMKHEENCPSVRDVGYV 180

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
           CS ESTQVTNGLNE AKQEICKGDSGTK  YDSLALGCGNSNPLPGVSIDEKE SK SSP
Sbjct: 181 CSSESTQVTNGLNEFAKQEICKGDSGTKLAYDSLALGCGNSNPLPGVSIDEKEASKPSSP 240

Query: 241 LLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300
           LLLGSRSRHLIPKPARSVFNVGLE N SMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE
Sbjct: 241 LLLGSRSRHLIPKPARSVFNVGLESNTSMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300

Query: 301 LQQISGA 307
           LQQISGA
Sbjct: 301 LQQISGA 307

[Close]

BLAST of Lsi03G022820 vs. TrEMBL
Match: B9SRS4_RICCO (Transcription factor, putative OS=Ricinus communis GN=RCOM_1057510 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.6e-83
Identity = 172/324 (53.09%), Postives = 210/324 (64.81%), Query Frame = 1


Query: 4   RTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWRECASC 63
           +TCMN LCGA+S+ +WRKGW LRSGDFA LCD CG+AY+QS FCD+FH KDSGWREC SC
Sbjct: 5   KTCMNALCGATSN-DWRKGWPLRSGDFALLCDNCGTAYEQSTFCDLFHSKDSGWRECVSC 64

Query: 64  GKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTG-------------EKLNGLG 123
           GK LHCGCIAS+FL+EL DGGGVNCI+C K+  +++ S+              EK NG G
Sbjct: 65  GKRLHCGCIASRFLLELLDGGGVNCINCIKSSGINSVSSNHLYGLANLFYVWDEKPNGFG 124

Query: 124 TSQVQNSGDFQSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEEN 183
            S++ N  + QS   ++        ++ GN TE    R     Q++  +VS  QMK E+N
Sbjct: 125 MSKLDNVSELQS--SDNQLDVERKFLRLGNSTEVIATRHLLQLQNDETSVSFRQMKQEDN 184

Query: 184 CPSVRDVGYVCSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSL-------ALGC--GNS 243
            P V ++G        Q +NGL+  AK E  K     K  Y+SL        LG   GN 
Sbjct: 185 FPPVGEIGSTSFSNLNQASNGLSLTAKPETRKATIAAKELYESLTQTNLSITLGSTFGNP 244

Query: 244 NPLPGVSIDEKEDSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAE 303
            P PG  +DE+  SK+SSPL  GSR RHL+PKP +S    GLE NA MVSQ+RVARPPAE
Sbjct: 245 IPFPGAVVDERTQSKASSPLQQGSRCRHLLPKPPKSALVTGLETNAGMVSQIRVARPPAE 304

Query: 304 GRGRNQLLPRYWPKITDQELQQIS 305
           GRGRNQLLPRYWP+ITDQELQQIS
Sbjct: 305 GRGRNQLLPRYWPRITDQELQQIS 325

[Close]

BLAST of Lsi03G022820 vs. TrEMBL
Match: M5W8A7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001234mg PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 9.7e-83
Identity = 167/316 (52.85%), Postives = 205/316 (64.87%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           M  RTC+N  CG SSS EW+KGWALRSG FA LC KC SAY+QSIFCD+FH K+SGWREC
Sbjct: 1   MEPRTCVNSACGTSSSIEWKKGWALRSGGFANLCPKCWSAYEQSIFCDIFHSKESGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQN-SGD 120
             CGK LHCGCIAS FL++L DGGGV CI CAK+       + EK +GLG S++      
Sbjct: 61  ILCGKRLHCGCIASMFLLDLLDGGGVKCIKCAKSSEPQPILSDEKPDGLGISKISELQPT 120

Query: 121 FQSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGY 180
            Q   ++  N  +L LIQ GN  + N  R     Q+N+ N  L +MKH +  P V ++G 
Sbjct: 121 AQDNQLDGTNVEKLKLIQLGNNKDCNGFRNLLQFQNNDANGLLQKMKHADTPPPVGEIGG 180

Query: 181 VCSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSL-------ALGC--GNSNPLPGVSID 240
            C       +NG +E  K E+ K + G    YDSL       +LG   G +NP+P    D
Sbjct: 181 TCLSNFNLASNGSSEAPKAEVFKANLGINDIYDSLPQTNLSMSLGAPLGKANPVPAAIFD 240

Query: 241 EKEDSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLP 300
           E+E SK+SSPLL G+RSR+L PKP +     GLE N+++ S  RVARPPAEGRGRNQLLP
Sbjct: 241 EREHSKTSSPLLPGARSRNLFPKPPKLALGAGLEENSTIASHARVARPPAEGRGRNQLLP 300

Query: 301 RYWPKITDQELQQISG 306
           RYWP+ITDQELQQISG
Sbjct: 301 RYWPRITDQELQQISG 316

[Close]

BLAST of Lsi03G022820 vs. TrEMBL
Match: A0A0D2R709_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G004300 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.3e-82
Identity = 173/314 (55.10%), Postives = 207/314 (65.92%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           MAL++CMNVLCGAS+S EWR GW LRSGDFA LCDKCGSAY+QSIFCDVFH KDSGWR+C
Sbjct: 1   MALKSCMNVLCGASTSIEWRNGWTLRSGDFANLCDKCGSAYEQSIFCDVFHSKDSGWRDC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SCGK LHCGCIAS+FL+EL DGGG+NC+SCAK    +     EK NG G  +  ++G  
Sbjct: 61  NSCGKPLHCGCIASRFLLELLDGGGINCVSCAKKSGFNHMIEDEKPNGFGMVKA-DAGQL 120

Query: 121 QSFLVED----GNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRD 180
            S   ++     +   L L+Q  N  E   LRQ     +++++ SL QMK +E  P  R+
Sbjct: 121 HSTSADNQLSGASIENLQLMQLSNNAESIGLRQLLQLHNDDSSGSLGQMKQDEFLPPPRE 180

Query: 181 VGYVCSLESTQVTNGLNEIAKQEICKGD--SGTKFTYDSLALG--CGNSNPLPGVSIDEK 240
           +G  C     Q +NG  E  K    K +       T  S++LG   GN N  P   +DEK
Sbjct: 181 IGSTCLTSINQASNGSVEAVKPTTSKVNIFDSLPQTNLSISLGGSLGNQNGFPSSVVDEK 240

Query: 241 EDSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRY 300
             SK SS L   S+SRHL+PKP RSV   GLE NA  V Q+RVARPPAEGRGRNQLLPRY
Sbjct: 241 --SKMSSVLQQASKSRHLLPKPPRSVLATGLEMNAGTVPQIRVARPPAEGRGRNQLLPRY 300

Query: 301 WPKITDQELQQISG 306
           WP+ITDQELQQISG
Sbjct: 301 WPRITDQELQQISG 311

[Close]

BLAST of Lsi03G022820 vs. TrEMBL
Match: A0A0B2SFE8_GLYSO (B3 domain-containing protein OS=Glycine soja GN=glysoja_039569 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.8e-82
Identity = 171/323 (52.94%), Postives = 212/323 (65.63%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           M  R+CMNV C  S++  WRKGWALRSG+FA LCDKCGSAY+QS +CD+FH  DSGWREC
Sbjct: 1   MESRSCMNVACATSTTIRWRKGWALRSGEFADLCDKCGSAYEQSTYCDMFHSNDSGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SC K LHCGCIAS   +EL D GGV+CISCA+N  L   +  EK NG GTS+VQN    
Sbjct: 61  TSCDKRLHCGCIASMSQLELLDTGGVSCISCARNSGLQPIANNEKPNGSGTSKVQNVSTQ 120

Query: 121 QSFLVEDGNSHRLTL--IQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVG 180
           Q +      +++LT+  +Q G+  E + LR      +   +    +MK  E  PSV ++G
Sbjct: 121 QQYT---SLANQLTVRGMQVGHYAENDGLRCWFKPHNVETDGPSAEMK-PEILPSVGELG 180

Query: 181 YVCSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLA---------LGCGNSNPLPGVSI 240
                +    +NG ++ +K E CK ++  +  Y+SLA            GNSNP     +
Sbjct: 181 NTLISQFHCESNGSSKASKAENCKAETEMRDIYESLAQTNLSMTLAAPLGNSNPFHSAVV 240

Query: 241 DEKEDSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLL 300
           DE+E SK +SPLLLGSRSRHL+PKP RS     LE NA MVSQ+RVARPPAEGRGRNQLL
Sbjct: 241 DEREQSK-TSPLLLGSRSRHLLPKPPRSTIGTSLEANAGMVSQIRVARPPAEGRGRNQLL 300

Query: 301 PRYWPKITDQELQQISGAYPSLS 312
           PRYWP+ITDQELQQISG YP+ S
Sbjct: 301 PRYWPRITDQELQQISGEYPAFS 318

[Close]

BLAST of Lsi03G022820 vs. TAIR10
Match: AT4G32010.1 (AT4G32010.1 HSI2-like 1)

HSP 1 Score: 245.0 bits (624), Expect = 6.2e-65
Identity = 142/316 (44.94%), Postives = 188/316 (59.49%), Query Frame = 1


Query: 2   ALRTCMNVLCGASSST-EWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 61
           +++ CMN LCGA+S++ EW+KGW +RSGD A+LCDKCG AY+QSIFC+VFH K+SGWREC
Sbjct: 3   SIKVCMNALCGAASTSGEWKKGWPMRSGDLASLCDKCGCAYEQSIFCEVFHAKESGWREC 62

Query: 62  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNLLHTTSTGEKLNGLGTSQVQNSGDFQ 121
            SC K LHCGCIAS+F+MEL + GGV CISCAK           L  +  S   N  DF 
Sbjct: 63  NSCDKRLHCGCIASRFMMELLENGGVTCISCAKK--------SGLISMNVSHESNGKDFP 122

Query: 122 SFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENC-PSVRDVGYV 181
           SF   +           G+  E   L+     Q  +   S +QMK EE+  PS       
Sbjct: 123 SFASAE---------HVGSVLERTNLKHLLHFQRIDPTHSSLQMKQEESLLPS------- 182

Query: 182 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNS---NPLPGVSIDEKEDSKS 241
            SL++ +      E++ Q              +L++  G +   +P    ++D++  SK+
Sbjct: 183 -SLDALRHKTERKELSAQP-------------NLSISLGPTLMTSPFHDAAVDDR--SKT 242

Query: 242 SSPLLLGSRSRHLIPKPARSV-FNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKI 301
           +S   L  RSR L+PKPA S     G+EP+ S+VSQ+ VARPP EGRG+ QLLPRYWP+I
Sbjct: 243 NSIFQLAPRSRQLLPKPANSAPIAAGMEPSGSLVSQIHVARPPPEGRGKTQLLPRYWPRI 278

Query: 302 TDQELQQISGAYPSLS 312
           TDQEL Q+SG YP LS
Sbjct: 303 TDQELLQLSGQYPHLS 278

[Close]

BLAST of Lsi03G022820 vs. TAIR10
Match: AT2G30470.1 (AT2G30470.1 high-level expression of sugar-inducible gene 2)

HSP 1 Score: 185.3 bits (469), Expect = 5.9e-47
Identity = 117/309 (37.86%), Postives = 159/309 (51.46%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           M  + CMN  CG +S+ EW+KGW LRSG  A LC +CGSAY+ S+FC+ FH   SGWREC
Sbjct: 6   MGSKMCMNASCGTTSTVEWKKGWPLRSGLLADLCYRCGSAYESSLFCEQFHKDQSGWREC 65

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCA-KNLLHTTSTGEKLNGLGTSQVQNSGDF 120
             C K LHCGCIASK  +EL D GGV C +CA  + L+  + GE           N G F
Sbjct: 66  YLCSKRLHCGCIASKVTIELMDYGGVGCSTCACCHQLNLNTRGE-----------NPGVF 125

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
               ++     +    +SG + EG+   Q  +   +         K EE  P  R  G +
Sbjct: 126 SRLPMKTLADRQHVNGESGGRNEGDLFSQPLVMGGD---------KREEFMPH-RGFGKL 185

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
            S EST   + L+   +         +     SL +G   +   P  + +  E  K  SP
Sbjct: 186 MSPESTTTGHRLDAAGEMH------ESSPLQPSLNMGLAVNPFSPSFATEAVEGMKHISP 245

Query: 241 L---LLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKIT 300
               ++   + +++ KP+R    +   P AS  +Q R+ RPP EGRGR  LLPRYWPK T
Sbjct: 246 SQSNMVHCSASNILQKPSRPA--ISTPPVASKSAQARIGRPPVEGRGRGHLLPRYWPKYT 285

Query: 301 DQELQQISG 306
           D+E+QQISG
Sbjct: 306 DKEVQQISG 285

[Close]

BLAST of Lsi03G022820 vs. TAIR10
Match: AT4G21550.1 (AT4G21550.1 VP1/ABI3-like 3)

HSP 1 Score: 117.5 bits (293), Expect = 1.5e-26
Identity = 50/93 (53.76%), Postives = 60/93 (64.52%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           ++ R C N  C        R GW LRSGDF  LCD+C SAY+Q  FCDVFH + SGWR C
Sbjct: 12  LSARFCFNHECFEFKLDHCRPGWRLRSGDFVDLCDRCASAYEQGKFCDVFHQRASGWRCC 71

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAK 94
            SCGK +HCGCIAS     L D GG+ C++CA+
Sbjct: 72  ESCGKRIHCGCIASASAYTLMDAGGIECLACAR 104

[Close]

BLAST of Lsi03G022820 vs. NCBI nr
Match: gi|778683037|ref|XP_011651832.1| (PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X2 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 6.8e-162
Identity = 284/307 (92.51%), Postives = 288/307 (93.81%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           MALRTCMNV C ASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCD+FHLKDSGWREC
Sbjct: 1   MALRTCMNVSCRASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDIFHLKDSGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SCGKHLHCGCIASKFLMELHD GGVNCISCAK+L LHTTST EKLNGLGTSQVQNSGD 
Sbjct: 61  TSCGKHLHCGCIASKFLMELHDSGGVNCISCAKSLGLHTTSTSEKLNGLGTSQVQNSGDL 120

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
           QSFLVEDGN+ R+TLIQSGNK EGNELRQSHLS SNN NVSLVQMKHEENCPSVRDVGYV
Sbjct: 121 QSFLVEDGNNDRITLIQSGNKAEGNELRQSHLSPSNNKNVSLVQMKHEENCPSVRDVGYV 180

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
           CS ESTQVTNGLNE AKQEICKGDSGTK  YDSLALGCGNSNPLPGVSIDEKE SK SSP
Sbjct: 181 CSSESTQVTNGLNEFAKQEICKGDSGTKLAYDSLALGCGNSNPLPGVSIDEKEASKPSSP 240

Query: 241 LLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300
           LLLGSRSRHLIPKPARSVFNVGLE N SMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE
Sbjct: 241 LLLGSRSRHLIPKPARSVFNVGLESNTSMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300

Query: 301 LQQISGA 307
           LQQISGA
Sbjct: 301 LQQISGA 307

[Close]

BLAST of Lsi03G022820 vs. NCBI nr
Match: gi|778683034|ref|XP_011651831.1| (PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X1 [Cucumis sativus])

HSP 1 Score: 578.6 bits (1490), Expect = 6.8e-162
Identity = 284/307 (92.51%), Postives = 288/307 (93.81%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           MALRTCMNV C ASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCD+FHLKDSGWREC
Sbjct: 1   MALRTCMNVSCRASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDIFHLKDSGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SCGKHLHCGCIASKFLMELHD GGVNCISCAK+L LHTTST EKLNGLGTSQVQNSGD 
Sbjct: 61  TSCGKHLHCGCIASKFLMELHDSGGVNCISCAKSLGLHTTSTSEKLNGLGTSQVQNSGDL 120

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
           QSFLVEDGN+ R+TLIQSGNK EGNELRQSHLS SNN NVSLVQMKHEENCPSVRDVGYV
Sbjct: 121 QSFLVEDGNNDRITLIQSGNKAEGNELRQSHLSPSNNKNVSLVQMKHEENCPSVRDVGYV 180

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
           CS ESTQVTNGLNE AKQEICKGDSGTK  YDSLALGCGNSNPLPGVSIDEKE SK SSP
Sbjct: 181 CSSESTQVTNGLNEFAKQEICKGDSGTKLAYDSLALGCGNSNPLPGVSIDEKEASKPSSP 240

Query: 241 LLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300
           LLLGSRSRHLIPKPARSVFNVGLE N SMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE
Sbjct: 241 LLLGSRSRHLIPKPARSVFNVGLESNTSMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300

Query: 301 LQQISGA 307
           LQQISGA
Sbjct: 301 LQQISGA 307

[Close]

BLAST of Lsi03G022820 vs. NCBI nr
Match: gi|659083366|ref|XP_008442317.1| (PREDICTED: B3 domain-containing transcription repressor VAL2 [Cucumis melo])

HSP 1 Score: 577.8 bits (1488), Expect = 1.2e-161
Identity = 284/307 (92.51%), Postives = 288/307 (93.81%), Query Frame = 1


Query: 1   MALRTCMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWREC 60
           MALRTCMN+ C ASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCD+FHLKDSGWREC
Sbjct: 1   MALRTCMNISCRASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDIFHLKDSGWREC 60

Query: 61  ASCGKHLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDF 120
            SCGKHLHCGCIASKFLMELHD GGVNCISCAKNL LHTTST EKLNGLGTSQVQ SGD 
Sbjct: 61  TSCGKHLHCGCIASKFLMELHDSGGVNCISCAKNLGLHTTSTSEKLNGLGTSQVQTSGDL 120

Query: 121 QSFLVEDGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYV 180
           QSFLVEDGN+ R+TLIQS NKTEGNELRQSHLS SNN NVSLVQMKHEENCPSVRDVGYV
Sbjct: 121 QSFLVEDGNNDRITLIQSRNKTEGNELRQSHLSPSNNKNVSLVQMKHEENCPSVRDVGYV 180

Query: 181 CSLESTQVTNGLNEIAKQEICKGDSGTKFTYDSLALGCGNSNPLPGVSIDEKEDSKSSSP 240
           CS ESTQV NGLNE AKQEICKGDSGTK TYDSLALGCGNSNPLPGVSIDEKE SK SSP
Sbjct: 181 CSSESTQVMNGLNEFAKQEICKGDSGTKLTYDSLALGCGNSNPLPGVSIDEKEASKPSSP 240

Query: 241 LLLGSRSRHLIPKPARSVFNVGLEPNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300
           LLLGSRSRHLIPKPARSVFNVGLE NASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE
Sbjct: 241 LLLGSRSRHLIPKPARSVFNVGLESNASMVSQVRVARPPAEGRGRNQLLPRYWPKITDQE 300

Query: 301 LQQISGA 307
           LQQISGA
Sbjct: 301 LQQISGA 307

[Close]

BLAST of Lsi03G022820 vs. NCBI nr
Match: gi|1009158746|ref|XP_015897448.1| (PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 339.0 bits (868), Expect = 9.0e-90
Identity = 177/315 (56.19%), Postives = 217/315 (68.89%), Query Frame = 1


Query: 6   CMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWRECASCGK 65
           CMNV CGAS+S EW+KGW LRSG +A LCDKCGSAY+Q IFCD+FH K+SGWREC  CGK
Sbjct: 3   CMNVSCGASNSIEWKKGWPLRSGGYANLCDKCGSAYEQFIFCDIFHAKESGWRECTLCGK 62

Query: 66  HLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDFQSFLV 125
            LHCGC+AS+FL+EL DGGGV CI+CAKN  L + +  EK NG GTS+V    D Q   V
Sbjct: 63  RLHCGCVASRFLLELLDGGGVKCINCAKNSGLRSITNDEKPNGPGTSKV---SDLQLGSV 122

Query: 126 E---DGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYVCS 185
               DG+  ++ ++Q  N T+GN LR    SQ +++N    +MK EE   SV ++   C 
Sbjct: 123 NNQLDGSFEQIKVMQLANDTQGNGLRDLLQSQKDDSNGLFRKMKQEEVPQSVSEIRSTCL 182

Query: 186 LESTQVTNGLNEIAKQEICKGDSGTKFTYDSL-------ALG--CGNSNPLPGVSIDEKE 245
               Q +NG +E +K E+CK + GT   Y+SL        LG   GN NP PG  +DE+E
Sbjct: 183 SNLNQASNGSSEASKAELCKANIGTNDIYESLPHTNLSMTLGTPLGNLNPFPGAIVDERE 242

Query: 246 DSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVS--QVRVARPPAEGRGRNQLLPR 305
           +SK+S P L G+RSRHL+PKP +S    GLE N SM S  Q+RVARPPAEGRGRNQLLPR
Sbjct: 243 NSKASPPFLQGARSRHLLPKPPKSALATGLEANTSMASQGQIRVARPPAEGRGRNQLLPR 302

[Close]

BLAST of Lsi03G022820 vs. NCBI nr
Match: gi|1009158750|ref|XP_015897450.1| (PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 339.0 bits (868), Expect = 9.0e-90
Identity = 177/315 (56.19%), Postives = 217/315 (68.89%), Query Frame = 1


Query: 6   CMNVLCGASSSTEWRKGWALRSGDFATLCDKCGSAYDQSIFCDVFHLKDSGWRECASCGK 65
           CMNV CGAS+S EW+KGW LRSG +A LCDKCGSAY+Q IFCD+FH K+SGWREC  CGK
Sbjct: 3   CMNVSCGASNSIEWKKGWPLRSGGYANLCDKCGSAYEQFIFCDIFHAKESGWRECTLCGK 62

Query: 66  HLHCGCIASKFLMELHDGGGVNCISCAKNL-LHTTSTGEKLNGLGTSQVQNSGDFQSFLV 125
            LHCGC+AS+FL+EL DGGGV CI+CAKN  L + +  EK NG GTS+V    D Q   V
Sbjct: 63  RLHCGCVASRFLLELLDGGGVKCINCAKNSGLRSITNDEKPNGPGTSKV---SDLQLGSV 122

Query: 126 E---DGNSHRLTLIQSGNKTEGNELRQSHLSQSNNNNVSLVQMKHEENCPSVRDVGYVCS 185
               DG+  ++ ++Q  N T+GN LR    SQ +++N    +MK EE   SV ++   C 
Sbjct: 123 NNQLDGSFEQIKVMQLANDTQGNGLRDLLQSQKDDSNGLFRKMKQEEVPQSVSEIRSTCL 182

Query: 186 LESTQVTNGLNEIAKQEICKGDSGTKFTYDSL-------ALG--CGNSNPLPGVSIDEKE 245
               Q +NG +E +K E+CK + GT   Y+SL        LG   GN NP PG  +DE+E
Sbjct: 183 SNLNQASNGSSEASKAELCKANIGTNDIYESLPHTNLSMTLGTPLGNLNPFPGAIVDERE 242

Query: 246 DSKSSSPLLLGSRSRHLIPKPARSVFNVGLEPNASMVS--QVRVARPPAEGRGRNQLLPR 305
           +SK+S P L G+RSRHL+PKP +S    GLE N SM S  Q+RVARPPAEGRGRNQLLPR
Sbjct: 243 NSKASPPFLQGARSRHLLPKPPKSALATGLEANTSMASQGQIRVARPPAEGRGRNQLLPR 302

The following BLAST results are available for this feature:

BLAST of Lsi03G022820 vs. Swiss-Prot


Match Name	E-value	Identity	Description
VAL2_ARATH	1.1e-63	44.94	B3 domain-containing transcription repressor VAL2 OS=Arabidopsis thaliana GN=VAL...	[more]
Y7797_ORYSJ	5.5e-55	38.64	B3 domain-containing protein Os07g0679700 OS=Oryza sativa subsp. japonica GN=Os0...	[more]
VAL1_ARATH	1.0e-45	37.86	B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL...	[more]
VAL3_ARATH	2.7e-25	53.76	B3 domain-containing transcription factor VAL3 OS=Arabidopsis thaliana GN=VAL3 P...	[more]
Y7633_ORYSJ	1.8e-21	42.24	B3 domain-containing protein Os07g0563300 OS=Oryza sativa subsp. japonica GN=Os0...	[more]

BLAST of Lsi03G022820 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LCL4_CUCSA	4.7e-162	92.51	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G728060 PE=4 SV=1	[more]
B9SRS4_RICCO	2.6e-83	53.09	Transcription factor, putative OS=Ricinus communis GN=RCOM_1057510 PE=4 SV=1	[more]
M5W8A7_PRUPE	9.7e-83	52.85	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001234mg PE=4 SV=1	[more]
A0A0D2R709_GOSRA	1.3e-82	55.10	Uncharacterized protein OS=Gossypium raimondii GN=B456_005G004300 PE=4 SV=1	[more]
A0A0B2SFE8_GLYSO	4.8e-82	52.94	B3 domain-containing protein OS=Glycine soja GN=glysoja_039569 PE=4 SV=1	[more]

BLAST of Lsi03G022820 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G32010.1	6.2e-65	44.94	HSI2-like 1	[more]
AT2G30470.1	5.9e-47	37.86	high-level expression of sugar-inducible gene 2	[more]
AT4G21550.1	1.5e-26	53.76	VP1/ABI3-like 3	[more]

BLAST of Lsi03G022820 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778683037\|ref\|XP_011651832.1\|	6.8e-162	92.51	PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X2 [Cu...	[more]
gi\|778683034\|ref\|XP_011651831.1\|	6.8e-162	92.51	PREDICTED: B3 domain-containing transcription repressor VAL2-like isoform X1 [Cu...	[more]
gi\|659083366\|ref\|XP_008442317.1\|	1.2e-161	92.51	PREDICTED: B3 domain-containing transcription repressor VAL2 [Cucumis melo]	[more]
gi\|1009158746\|ref\|XP_015897448.1\|	9.0e-90	56.19	PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X1 [Ziziphu...	[more]
gi\|1009158750\|ref\|XP_015897450.1\|	9.0e-90	56.19	PREDICTED: B3 domain-containing transcription repressor VAL2 isoform X2 [Ziziphu...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR013088	Znf_NHR/GATA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi03G022820.1	Lsi03G022820.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013088	Zinc finger, NHR/GATA-type	GENE3D	G3DSA:3.30.50.10		coord: 4..42 score: 3.
None	No IPR available	PANTHER	PTHR23336	ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.	coord: 1..305 score: 8.7E
None	No IPR available	PANTHER	PTHR23336:SF24	SUBFAMILY NOT NAMED	coord: 1..305 score: 8.7E

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi03G022820	Cucumber (Gy14) v1	cgylsiB203
Lsi03G022820	Cucumber (Gy14) v1	cgylsiB296
Lsi03G022820	Cucurbita maxima (Rimu)	cmalsiB242
Lsi03G022820	Cucurbita maxima (Rimu)	cmalsiB612
Lsi03G022820	Cucurbita maxima (Rimu)	cmalsiB754
Lsi03G022820	Cucurbita maxima (Rimu)	cmalsiB802
Lsi03G022820	Cucurbita moschata (Rifu)	cmolsiB230
Lsi03G022820	Cucurbita moschata (Rifu)	cmolsiB599
Lsi03G022820	Cucurbita moschata (Rifu)	cmolsiB747
Lsi03G022820	Cucurbita pepo (Zucchini)	cpelsiB061
Lsi03G022820	Cucurbita pepo (Zucchini)	cpelsiB403
Lsi03G022820	Cucurbita pepo (Zucchini)	cpelsiB503
Lsi03G022820	Cucurbita pepo (Zucchini)	cpelsiB707
Lsi03G022820	Wild cucumber (PI 183967)	cpilsiB185
Lsi03G022820	Wild cucumber (PI 183967)	cpilsiB277
Lsi03G022820	Cucumber (Chinese Long) v2	culsiB187
Lsi03G022820	Cucumber (Chinese Long) v2	culsiB277
Lsi03G022820	Melon (DHL92) v3.5.1	lsimeB260
Lsi03G022820	Watermelon (Charleston Gray)	lsiwcgB219
Lsi03G022820	Watermelon (Charleston Gray)	lsiwcgB241
Lsi03G022820	Watermelon (97103) v1	lsiwmB240
Lsi03G022820	Watermelon (97103) v1	lsiwmB267
Lsi03G022820	Cucumber (Gy14) v2	cgyblsiB171
Lsi03G022820	Cucumber (Gy14) v2	cgyblsiB258
Lsi03G022820	Melon (DHL92) v3.6.1	lsimedB273
Lsi03G022820	Silver-seed gourd	carlsiB141
Lsi03G022820	Silver-seed gourd	carlsiB261
Lsi03G022820	Silver-seed gourd	carlsiB915
Lsi03G022820	Cucumber (Chinese Long) v3	cuclsiB203
Lsi03G022820	Cucumber (Chinese Long) v3	cuclsiB298
Lsi03G022820	Watermelon (97103) v2	lsiwmbB218
Lsi03G022820	Watermelon (97103) v2	lsiwmbB235
Lsi03G022820	Wax gourd	lsiwgoB299
Lsi03G022820	Wax gourd	lsiwgoB331
Lsi03G022820	Bottle gourd (USVL1VR-Ls)	lsilsiB071