Lsi03G022300 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G022300
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPlant/T10O8-60 protein
Locationchr03 : 33322575 .. 33328081 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGCGTTTTTATTCCATTGATTCAAGGGTTTTGCTTATGCTTTTCGCTTCTTTTACCTTTTACGGATTCTTACAGTGTATGCTGATTGTTCTGTTTCCTAGAAGGAAGGTTAAACTAGCTTCTGTAATCTTCGTCTATCGTTTCAGGCATCTGAATCGTTGTTGATTTATTTTAATTTAGGGAAACGAGCATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGGTAATTGAATGTTAAGGCTTTATATATTGCATGAGAGGATTTTCCTTTCCTTCGTTTTGAATTGGAGGATGATGATATTTGTATGAAGAAGCTTCATCTCTGGCTGGAGGGATTGGTTAGTTCCTATTTGGCTCGTTCCATTGAAGCAAAATATTCTCAGATTTTCTTTTATGTTTATCTGCTGCCTTAATGGTTGGGTGTGCAGATGAGGAGATCTTAGAAAATTTTGCTACAGGTCCATTTATTTTCCTTTTGGGGAATTGATGTCCCATGATCTTCGTTTAGTTTTATTAGCTTTAGCGGTTCGTTGATGGTTGTGCGTTTCGTAGCTTAGGAGATTTGTTAAACTTTTGCTGTAGACACATTTTCTATTTCTTCTATAGCATTAATGGTGCCTAATCTATGTTTGTTAAATCCATGCTACAATCGTAACTTAAATGGTTGAGTTAGAGTAAAATTTTATCTTTTGATATTATTTTTCATTTGCGTGGTCAGTTCAGTCATCCAACAGTTAGAATACGACTTTGTAGGCCGACAACAATTCAATTCATGAGCGGGAGCAGCCCAACTTGCCATAAAAAACGGCCTACTTATAGCCTCTTTTCCTCTTACTTACCCCCTGTTCTCTCTTAAAGCTTGTATAAAAGAAGATGAGGGCACCACTTTCTATTTCAAAGAGGATTTCTATGAGAATAGACAATGAACCATATTCTTGGGATTGCTGATATAAAATGGAACAAAAGATTATTAACAAAGATTTTAACTTAGGCTTTTTTTCTTAAAGTATTATATTGGTTCATTATCAGATTGAGTTTAAGGTACTAGGTAATGGTTTTGTTTTTTTTATAGGAATTTATTTCATTGGAAACATGAACTATACTAAAGTAGCAGGGGAGGAAATATTTATCCGAGGTAAAGGAGAAAGCTCAAAGCTACCAAGCTTGCACCTAGTTAGAACCCCACTAACACAACATAACCCCATATAATAGAAAAGGCTTGTTGTTTGGTTTACAGATCATTTTCTGTATTTGATTTTTGTTTGGTTTTATAGATCATTTTCACAATTCTGTTTATTCACTCTCAATTAGAGGACTCTGTCCATTTTCCCCTTTATTTGCGTTCGTGTATTTCTTTGTTCTGTTCAAAATTTTGTGTCAAGCGGCTTCAACTGTTGTCATTTTGGCATCTGGAACAGTGTCACAGACTCACAAATGATTATTCTTTGTTGTCTTCCCCAAGGTTGTCTCTTATTCCCTCGACTTGTGTAATGATTGTGGATATGATTGTATCGATTATGCTTTTAAGAGTTGAGCCATTTGGGCATTCTTTCTCCAGCATATGTGTCTGCTATTTAATCTAAGACTTTCAAGCTTGGTGACAACTGAAAAGTCACATTTGTCTGCATAATACTAACTGTTCATTCTTTCACTCTGATTTTCCTTTTTTGCAGCCGTACGTTTCAAAGATTTGCTGTGAGGACATCGAAGCAAATTGAGGATATATCTAACAGGGGTAGAAACTTTACTCTTTTTTTTTTGCTTCATTGATTTCGATTTTACTTATGGTGTTTATTGTTGAGCTGGTTTAACTTAAGCTAATAAGACTGGAATTGTCTTGCAGCTGCGCAGAAGAAGCAAGAACTTGCAGAACAAATGAAAGATCTCTCCAAAAATTTTGATGTGAGATGCTTCTTACAATTAAAATTTATTTTGAATAGTGTAGACATATCCTCGTGCCTTATTCGATCTTTTTGCTTGCAGTCTTTCAAGAACCAATAATGCAGAGTGGAACGTGTTACTGCAACATGATGTATATCCTATTCCAATTTTACTCATAATAGTCGCATATTCCCTGAAGATTTGTTTAATAGCCTTATCTTGTCTCTGTGTATTGAGGAATTTGTGACAGTAGAATTTTAGATGTGTTCTTGGTTTCCTGGTCACCGTTAACTGTGTACCTTTTTTGTCTCGCCATAAACACCACTGGACTGCGTGACTTTAAATTTGTCTTGAAACAAAGAATTGGGAATTTAAGAATAATAAGTTTGCTTTTAATCGTGAAACGGAACATACTTTTAATATGCCATTTGGATCACATAGCATATCAGAGAAATTTTTTATAGGTCGTATTCAAAATCACACCCTAATGGCCTGATGAGAAATATAGTCTTTACATGTATATAGTTACGTTTGATACTTCAAAGTTTAAACAATATAACACAAATAAAAGTGCATGTATTACTGATGTATCTGGCTGTTGAATTTTAAAGAATGTTCAACACAGGATAGATCTTTTTACTTTCAATGTACCGGGAATGCCTTAAGCACGTAATCGTTCACTTGTAAAATTCGATTATTTTTTTCCTTATACCATGTCTTCAACCCAACACCGATAATTTGAAACTATCGACCATTGTTAGTAAACAGATGCATAAATTCTGTTCATAAAACAAATTGTAGGGTTTAACTTCTTTTTCATCTCCAGATTAGCAATCTTTCTATAAAAAAAAAACATATTAACGACCAGACCTTTATATTCAGAAAACAATATTATTTTAACCCCTTTAAAGATGTAGACTTTTTCAATAAATAATGACAAAAATAGGGTTAAGTTGAAAATATTGACAAAAGTATGGTAGCCAGGTGTTGAGGGGGTCTAAGTGGGTTAGCAAAATTGTGACATTTGAGCAAAATGAGCGTAGTTTTGGCAGAGTTGATCGTGGACTCGCCTGCCATGTGTGGGCTCCGCTCACTTATTTTTTGAAATACTTTTATCCCTACCTTATTTTTGTCATTATTTTTTAAAAAAAAAAATTCTAAAAAAACGCACATCAAAACAGTAGAGTTGTTTTCACTCTTTCTGTACCCACCGAGCACCGAAAATGTGTTTTGATATTTCTTTCAACCGTTTTAATGCATGTATGAGGCAACGTGTAGGTGCTTCCCATTTACTCTACTTATTATTCTTGGTTGATGCTTTATTCATTGTCTAGTAGTAAGATGATTGAGCTTTTTGCAGGTTTAGGGTTACACTCTAATGTTTCTAGAACATTTCTGATGAAGTCTACACTTTAATGATCAGACATTTGTGTTCTGATGGTTTCAATTTTAAGCAGATTTTCATTCAATTTGAAATTTTCAAAAGTAGTAGGAAAAGCATCTATTTGGGTGAGTTATTTTTTAATTCCTATGTATGTTTTTGTTCGTGAATTCAATTTTATATTTTTTGTAATTTACTTTGTAATCGTGAATTACTTTGTAATTTTTATTGAGGTATCTTGGACAATTGATAATTCTCTGATAAAAATCCATAAAATCATTTTGCAATTTTCCTGATTTCAAAATTTTTTTTGCCATTTTTTAAAAATAAAATTTCCATTTTGCTATTACTCTTGTGAGTCCAAAACAAAAACGCAATTGATCAAACTAAATAAATAAAAAGGCAAAAAAATTATGTTTGAAGTGTAATAATCTGCACCTTTTAACACTTTGATGATTCAAAAATTATGTCGGGAGAATCATCTTTTGCTCTTATATTTCTTATAAATTCTCATATTATCTTTTGTCAAGCGGTTGTGATTTCTATATTAAAATAGACTAGGGAGAATCTTTACATGCTCCTTGAATCTTTACATGCCCCTTTTGCCTTTATATTTCTCATCAATTCTCATGTTACCTTTGTCGAGTAGAGGTGACTTTGCTATGTAGGGAGAATCTTTACATGCTCCTTTTGCCGTTACTTTTTTCATAATTTGTCGAGTGGTTTGACTTTTCGAGTATATGTGTCCATTTGAAAGGTGATTTTTCCAATTTTTAGTTTACAAAATAAATTTATATATTGAAAAAATAAAGTCTTAGATCAACTAAGTGCAATTGATGTTGACCGGATGCAACTCTTTTAAGTTAGGATGCAATAGATATCAATTGGATGCATTTGTTCATGGTGGGAATGGTTACACACATCAAATTGGTGCTTGATTCTTTCAATGTATATATGAGATGCACGTGTAAAAGAAAAATAAAATAAATACTTCCATTTACATTGTTAAAAAATTAATTTTATGAGATCCAAACTTTAGAGAAAATGCAAAAAAAGAAAAAAAAAATTTAATTGAATGAAAGTTATTATGTATATTATTAACATCTCAATTAGATAATTTAATTACCAAAAAAAAACTATAATATGAGGATGCTAAAATAAAAAAATTTACATTCGTAACTAAAATAAAATGGTATAATATTTATTTATTATATACTAAAAAAATAATAATTAGAACTACAAGATTTTCTGTGCATTGCAGTCCTTTCTTGACTAGTATAAATAAATATTAAGAGCTTTTACTCTAGATATATATATACACACACACACAAGCTTAAAAACAAGCCAATTCCAATCCTATCGTTTCACAACATTGAAATGATAAATAGTCTGACAAAAACTCTAAAACCCTGTCAAACCACAAATAATTTTTTAAAAAGGAAAAGAAAAGAAAAAAAGCTCCCAATTTTTTATAAATCGTTTTTGAAAAAATATTTGAACATATAAGAAAAATGTACAAACATTTCCAATCTACCATATTATAGGACATCAAAACAGTATCAATATGAATACAACTACAAATTATAAGGTTCATAACTTCAAAAAGTGGCAATACATGTTAACTAAAAACAACTCATTCCTCAAAACAAATTTTAAAAGCAATTTCTACAATATTTTTTTCCTTAAAATATATATCACATCGACACAAAACATAGAATAAGAAAGATATACAAGTTCAGCTGTCAGGAGTTGAATTAGAGGATGTTTCTATGAGCAGGTAGATATGGACAACAAAAATAAGGTTTAAGGACAGCAGAAAGGAATGAAAAGATTAGTAAAGAAAATAAATTTAGGCTAAATCAGTCGCACATCTCCAGTGACAATCAACGCATCCATGGAGTCTGAAATGAAAAAAAAAAAAAAGCAAGTATGTCGACCATACAAAAGAGAAGTTGGATTCATTAATAATACCCAATAAAGAACGTTCACCACTTTAATCTGGCAACCACACTCACCTGCTCATCGTATACAAATGAGATCAACGGTGGGGGCAGAACCAAATTTGAAGAAAGGAAAAAGCGAGGAGAATTTCTAGTTTTTTTTTTTTCCTTTTTGTTTTAAGGGTGTGGTTGTGGGGATGTTCATTCTTGGGATGCAGCACCATTGGCTGTGGTATCCATTGGCTCAGCATCCGTAG

mRNA sequence

ATGTCTGCGGAAACGAGCATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGTCTTTCAAGAACCAATAATGCAGAGTGGAACGTGTTACTGCAACATGATGGTGTGGTTGTGGGGATGTTCATTCTTGGGATGCAGCACCATTGGCTGTGGTATCCATTGGCTCAGCATCCGTAG

Coding sequence (CDS)

ATGTCTGCGGAAACGAGCATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGTCTTTCAAGAACCAATAATGCAGAGTGGAACGTGTTACTGCAACATGATGGTGTGGTTGTGGGGATGTTCATTCTTGGGATGCAGCACCATTGGCTGTGGTATCCATTGGCTCAGCATCCGTAG

Protein sequence

MSAETSMAGGNFMHRVVSYLVNEVLVNSLANSLSRTNNAEWNVLLQHDGVVVGMFILGMQHHWLWYPLAQHP
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G022300.1Lsi03G022300.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G022300Bhi11G001504Wax gourdlsiwgoB299
Lsi03G022300Carg01115Silver-seed gourdcarlsiB141
Lsi03G022300Carg12467Silver-seed gourdcarlsiB915
Lsi03G022300CsaV3_3G033590Cucumber (Chinese Long) v3cuclsiB203
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G022300Wax gourdlsiwgoB331
Lsi03G022300Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi03G022300Cucumber (Gy14) v1cgylsiB064
Lsi03G022300Cucumber (Gy14) v1cgylsiB296
Lsi03G022300Cucurbita maxima (Rimu)cmalsiB242
Lsi03G022300Cucurbita maxima (Rimu)cmalsiB612
Lsi03G022300Cucurbita maxima (Rimu)cmalsiB667
Lsi03G022300Cucurbita maxima (Rimu)cmalsiB754
Lsi03G022300Cucurbita maxima (Rimu)cmalsiB799
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB230
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB408
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB599
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB656
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB747
Lsi03G022300Cucurbita moschata (Rifu)cmolsiB787
Lsi03G022300Cucurbita pepo (Zucchini)cpelsiB061
Lsi03G022300Cucurbita pepo (Zucchini)cpelsiB345
Lsi03G022300Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G022300Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G022300Wild cucumber (PI 183967)cpilsiB185
Lsi03G022300Wild cucumber (PI 183967)cpilsiB277
Lsi03G022300Cucumber (Chinese Long) v2culsiB187
Lsi03G022300Cucumber (Chinese Long) v2culsiB277
Lsi03G022300Melon (DHL92) v3.5.1lsimeB277
Lsi03G022300Melon (DHL92) v3.5.1lsimeB260
Lsi03G022300Watermelon (Charleston Gray)lsiwcgB219
Lsi03G022300Watermelon (Charleston Gray)lsiwcgB241
Lsi03G022300Watermelon (97103) v1lsiwmB240
Lsi03G022300Watermelon (97103) v1lsiwmB267
Lsi03G022300Cucumber (Gy14) v2cgyblsiB171
Lsi03G022300Cucumber (Gy14) v2cgyblsiB258
Lsi03G022300Melon (DHL92) v3.6.1lsimedB273
Lsi03G022300Melon (DHL92) v3.6.1lsimedB291
Lsi03G022300Silver-seed gourdcarlsiB529
Lsi03G022300Silver-seed gourdcarlsiB604
Lsi03G022300Cucumber (Chinese Long) v3cuclsiB298
Lsi03G022300Watermelon (97103) v2lsiwmbB218
Lsi03G022300Watermelon (97103) v2lsiwmbB235