Lsi03G022110 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G022110
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 33157468 .. 33158743 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTAACGGCCTGAACAATCGCTCTGGCTCGCCTCGCCGGGTCGCCGCTCTTGAACACACCGGAGCCGACGAACACGCCGTCGCAACCGAGCTGCATCATCAGTGCTGCATCCGCCGGCGTCGCTACACCACCAGCGGCAAATTGAACCACTGGGAGCCTCCCGAGCTGCTTCGTTTGCAGAACCAAATCGTACGGCGCAGCGATCTTCTTGGCGAAGGTAAAGACCTCATCGTCGTCCATGTTCCTCAACAACCTGATATCTCCCATCACGGACCGCACGTGCCGCACCGCCTCAATGATATTGCCGGTACCAGCCTCGCCCTTGGTTCTGATCATCGCCGCCCCTTCACGAATACGCCGCAGCGCCTCGCCGAGGTTACGGCAGCCGCAGACGAAAGGAATGCGGAAATTGTGTTTGTTGATGTGGTTTTCTTCATCAGCGAGAGTAAGAACTTCGCTCTCATCCACATAATCGATACCAATGGCTTCGAGAATCTGAGCTTCAACGAAATGACCGATTCGAGCCTTCGCCATGACCGGAATCGTAACAGCTTGTTTGATTTCCTTGATGAGTTGAGGGTCACTCATTCTGGCGACGCCGCCTTGGGCTCGGATGTCTGCAGGAACTCTTTCAAGAGCCATGACGGCGCAGGCTCCGGCCTCTTCGGCGACACGAGCCTGCTCGGCGTTGACGACGTCCATAATTACGCCTCCGCGGAGCATTTGAGCCAATCCAACTTTCACAGAGAAGGGGGATTGCTTCGTCTCAGTGAGAGCACCGTTCCCGTACACCGCTACAACACCGGATCCTGCCATTTTCGCCGGAAAATAAAGGGAAGAATATGGCGGCGTATGAGAGAAAAGGGTGAAGATTCAGCCGCAGTGGAAAGGCTGAAGAAGAAGAAGGAAGTGACGAGAAATTGAGGCAGAGAGAGGTGGTTTAAGTAAAGGATGTTCTCGAATGATCTTATCGAGAAGAGAAGCGTAGTCCACACGTCAAGCCTACGCGCGTGGAATAGAAGATAGTGAGGCCCATTGAGTCGTTAATCGTTGAAAAAGGTATTCGAATCCAACGGCTGAAAATAAGAGATCAGGGAGCGTTACAATGGACGTGGTTTCCATGTTTATTAGCTCCAATTGAAGCCACGCATTTTGATGACTGAAGCCCTCGTTTTGCGCACTCTGGAGTTTTGATACGTGGCAACCGCTGGTTCGCTGGGTTCGTTTTCCTTCTTCTTTTATTTATTTATTTTTTTGAAATTACAGAATCACG

mRNA sequence

ATGAGTAACGGCCTGAACAATCGCTCTGGCTCGCCTCGCCGGGTCGCCGCTCTTGAACACACCGGAGCCGACGAACACGCCGTCGCAACCGAGCTGCATCATCAGTGCTGCATCCGCCGGCGTCGCTACACCACCAGCGGCAAATTGAACCACTGGGAGCCTCCCGAGCTGCTTCGTTTGCAGAACCAAATCGTACGGCGCAGCGATCTTCTTGGCGAAGGTAAAGACCTCATCGTCGTCCATGTTCCTCAACAACCTGATATCTCCCATCACGGACCGCACGTGCCGCACCGCCTCAATGATATTGCCGGTACCAGCCTCGCCCTTGGTTCTGATCATCGCCGCCCCTTCACGAATACGCCGCAGCGCCTCGCCGAGGTTACGGCAGCCGCAGACGAAAGGAATGCGGAAATTGTGTTTGTTGATGTGGTTTTCTTCATCAGCGAGAGTAAGAACTTCGCTCTCATCCACATAATCGATACCAATGGCTTCGAGAATCTGAGCTTCAACGAAATGACCGATTCGAGCCTTCGCCATGACCGGAATCGTAACAGCTTGTTTGATTTCCTTGATGAGTTGAGGGTCACTCATTCTGGCGACGCCGCCTTGGGCTCGGATGTCTGCAGGAACTCTTTCAAGAGCCATGACGGCGCAGGCTCCGGCCTCTTCGGCGACACGAGCCTGCTCGGCGTTGACGACGTCCATAATTACGCCTCCGCGGAGCATTTGAGCCAATCCAACTTTCACAGAGAAGGGGGATTGCTTCGTCTCAGTGAGAGCACCGTTCCCGTACACCGCTACAACACCGGATCCTGCCATTTTCGCCGGAAAATAAAGGGAAGAATATGGCGGCGTATGAGAGAAAAGGGTGAAGATTCAGCCGCAGTGGAAAGGCTGAAGAAGAAGAAGGAAGTGACGAGAAATTGAGGCAGAGAGAGGTGGTTTAAGTAAAGGATGTTCTCGAATGATCTTATCGAGAAGAGAAGCGTAGTCCACACGTCAAGCCTACGCGCGTGGAATAGAAGATAGTGAGGCCCATTGAGTCGTTAATCGTTGAAAAAGGTATTCGAATCCAACGGCTGAAAATAAGAGATCAGGGAGCGTTACAATGGACGTGGTTTCCATGTTTATTAGCTCCAATTGAAGCCACGCATTTTGATGACTGAAGCCCTCGTTTTGCGCACTCTGGAGTTTTGATACGTGGCAACCGCTGGTTCGCTGGGTTCGTTTTCCTTCTTCTTTTATTTATTTATTTTTTTGAAATTACAGAATCACG

Coding sequence (CDS)

ATGAGTAACGGCCTGAACAATCGCTCTGGCTCGCCTCGCCGGGTCGCCGCTCTTGAACACACCGGAGCCGACGAACACGCCGTCGCAACCGAGCTGCATCATCAGTGCTGCATCCGCCGGCGTCGCTACACCACCAGCGGCAAATTGAACCACTGGGAGCCTCCCGAGCTGCTTCGTTTGCAGAACCAAATCGTACGGCGCAGCGATCTTCTTGGCGAAGGTAAAGACCTCATCGTCGTCCATGTTCCTCAACAACCTGATATCTCCCATCACGGACCGCACGTGCCGCACCGCCTCAATGATATTGCCGGTACCAGCCTCGCCCTTGGTTCTGATCATCGCCGCCCCTTCACGAATACGCCGCAGCGCCTCGCCGAGGTTACGGCAGCCGCAGACGAAAGGAATGCGGAAATTGTGTTTGTTGATGTGGTTTTCTTCATCAGCGAGAGTAAGAACTTCGCTCTCATCCACATAATCGATACCAATGGCTTCGAGAATCTGAGCTTCAACGAAATGACCGATTCGAGCCTTCGCCATGACCGGAATCGTAACAGCTTGTTTGATTTCCTTGATGAGTTGAGGGTCACTCATTCTGGCGACGCCGCCTTGGGCTCGGATGTCTGCAGGAACTCTTTCAAGAGCCATGACGGCGCAGGCTCCGGCCTCTTCGGCGACACGAGCCTGCTCGGCGTTGACGACGTCCATAATTACGCCTCCGCGGAGCATTTGAGCCAATCCAACTTTCACAGAGAAGGGGGATTGCTTCGTCTCAGTGAGAGCACCGTTCCCGTACACCGCTACAACACCGGATCCTGCCATTTTCGCCGGAAAATAAAGGGAAGAATATGGCGGCGTATGAGAGAAAAGGGTGAAGATTCAGCCGCAGTGGAAAGGCTGAAGAAGAAGAAGGAAGTGACGAGAAATTGA

Protein sequence

MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQSNFHREGGLLRLSESTVPVHRYNTGSCHFRRKIKGRIWRRMREKGEDSAAVERLKKKKEVTRN
BLAST of Lsi03G022110 vs. TrEMBL
Match: A0A0E9NK00_9ASCO (Uncharacterized protein OS=Saitoella complicata NRRL Y-17804 GN=G7K_4268-t1 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 1.2e-32
Identity = 84/230 (36.52%), Postives = 128/230 (55.65%), Query Frame = 1

Query: 1   MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRL 60
           + + L++  G+  RV  LE TG++E  V  ELHH   I     TTS ++++ +  E   L
Sbjct: 91  VGDSLDDSLGTLSRVTGLEDTGSNEDTVTAELHHHGSISGGSDTTSSEVDNRQSLEASSL 150

Query: 61  QNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNT 120
             ++V    +LGE ++LIV       D+     HV   L+++ GT L LGSDH     + 
Sbjct: 151 LEKVVWDLQVLGEDEELIVRGGGSLADVGGDLAHVTDSLDNVTGTGLTLGSDHSSTLGDA 210

Query: 121 PQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHD 180
            + L +VT   DERN  +  VDVV  +   ++  L+  +D +G +NLS NE+TD+ L HD
Sbjct: 211 TESLTQVTGTTDERNLVVKLVDVVDVVGHGQDLGLVDEVDADGLKNLSLNEVTDADLSHD 270

Query: 181 RNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLG 231
            + + L D LD L V H+G+  + +DV R++ + HDG  +GL  DT LLG
Sbjct: 271 GDGDGLDDLLDHLGVGHTGNTTVPADVSRDTLEGHDGTSTGLLSDTGLLG 320

BLAST of Lsi03G022110 vs. TrEMBL
Match: W8ZIE2_9BACL (Uncharacterized protein OS=Paenibacillus sp. P22 GN=BN871_CM_00100 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 3.5e-32
Identity = 82/249 (32.93%), Postives = 138/249 (55.42%), Query Frame = 1

Query: 1   MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRL 60
           +S   ++ +G   RV  LE  GADE+AV+ ++HHQ  I  R +    +++  +   L+ +
Sbjct: 232 VSRRFHDGAGEFLRVVGLEDAGADEYAVSAQMHHQSRIGWRSHAACSEVDDRKLARLVHI 291

Query: 61  QNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNT 120
           + Q+V  + + G    L++       D++    HV +  N++A + LALG+ HR  F + 
Sbjct: 292 EQQLVVDAQVFGFRIQLVLGQAFDLADLARDQAHVANGFNNVARSRLALGTHHRCAFLDA 351

Query: 121 PQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHD 180
            Q LA++  +A ERN E   VD+  F+   ++FAL+ I+    F++  F+ M D+   HD
Sbjct: 352 AQSLAQILGSAYERNREFALVDMEHFVGRREHFALVDIVGAERFQHARFHIMADAGFGHD 411

Query: 181 RNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASA 240
           R+ N L    ++ RV H+G AA G+D+ R++ K HD   +  FGD  LL V DVH+ A+ 
Sbjct: 412 RDGNDLHHLFEDSRVRHAGYAACGADIRRHALKGHDCRSACRFGDLGLLRVHDVHDDAAF 471

Query: 241 EHLSQSNFH 250
            H   ++F+
Sbjct: 472 LHFRHTSFN 480

BLAST of Lsi03G022110 vs. TrEMBL
Match: A0A0T9BVI9_MYCTX (Uncharacterised protein OS=Mycobacterium tuberculosis GN=ERS027659_00920 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 8.8e-28
Identity = 77/233 (33.05%), Postives = 121/233 (51.93%), Query Frame = 1

Query: 14  RVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGE 73
           R A LE+TG  E A+  +LHH   +  R  T  G+    +      L N+ + R      
Sbjct: 3   RGAGLENTGTHEDALGAKLHHHRRVGGRGDTPGGEQCDRQLARPSYLGNEFIGRLQFFCR 62

Query: 74  GKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADE 133
            K  ++ H  Q  D++  GPHV  R+ D++G  LALG DH R   + PQRL E+     E
Sbjct: 63  DKQFVLRHRRQPADLTTDGPHVCGRVGDVSGPGLALGPDHGRSLADAPQRLTEIGRPTHE 122

Query: 134 RNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDEL 193
           R+ E+  VD+V  +S  ++  L+ ++D    ++L  +++ D+   H R+ +   D LD +
Sbjct: 123 RHREVPLVDMVGVVSGRQHLGLVDVVDAQRLQDLRLDKVADAHFSHHRDGDRGDDALDHV 182

Query: 194 RVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQS 247
            VTH    ALG+D+  + F+ H    +G  GD  LL  D+VH+ A+ EHL  +
Sbjct: 183 GVTHPRHPALGADIGGHPFQRHYRNRTGALGDAGLLRGDNVHDDAALEHLGHA 235

BLAST of Lsi03G022110 vs. TrEMBL
Match: H0BMQ9_9ACTN (Putative uncharacterized protein OS=Streptomyces sp. W007 GN=SPW_6547 PE=4 SV=1)

HSP 1 Score: 130.6 bits (327), Expect = 3.3e-27
Identity = 76/200 (38.00%), Postives = 114/200 (57.00%), Query Frame = 1

Query: 47  GKLNHWEPPELLRLQNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTS 106
           G+ +  +  EL  L +Q+V  +++LG G  L+VV   Q  D+      V   L+D+AGT 
Sbjct: 7   GEQHDGQLAELRDLLDQLVGGAEVLGGGVQLVVVEAAQPGDLVLDLTQVADGLDDVAGTG 66

Query: 107 LALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFEN 166
           LAL +DH R   +  Q LA+V  AADE   E   V VV  +   ++  L+ ++DT G E+
Sbjct: 67  LALRADHGRALGDAAQGLAQVGGAADEGGGERELVAVVDLVGRGEDLGLVDVVDTEGLEH 126

Query: 167 LSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDT 226
           L  +E+ D+ L HD + +   D LD + V H G AA+ +DV R+  + HDG G+ + GD 
Sbjct: 127 LGLDEVADAGLGHDGDGDGPDDLLDHVGVGHPGHAAVLADVGRDPLQGHDGHGARVLGDL 186

Query: 227 SLLGVDDVHNYASAEHLSQS 247
            L GVDDVH++A+ E L  +
Sbjct: 187 RLFGVDDVHDHAALELLGHA 206

BLAST of Lsi03G022110 vs. TrEMBL
Match: A0A090Y697_PAEMA (Uncharacterized protein OS=Paenibacillus macerans GN=DJ90_6509 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 8.2e-26
Identity = 66/148 (44.59%), Postives = 90/148 (60.81%), Query Frame = 1

Query: 100 NDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHII 159
           +DI GT   L +DHRR FT++ QR A+V  AA+ER  EI F+D+  F+   ++FAL+ ++
Sbjct: 6   HDIPGTGFTLRTDHRRAFTDSAQRFAKVFRAANERYGEIPFIDMKHFVRRGQHFALVQVV 65

Query: 160 DTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAG 219
               F+N  F  +TD   RHDRN N L+ F D  RV H GDAA    + RN  + HDG  
Sbjct: 66  YPQRFKNFRFYVVTDPGFRHDRNGNDLYYFFDNRRVRHPGDAAGCPYIRRNPLQRHDGGS 125

Query: 220 SGLFGDTSLLGVDDVHNYASAEHLSQSN 248
            G FGD  LLGV +VH+ A+  HL  ++
Sbjct: 126 PGRFGDLGLLGVHNVHDDAAFLHLGHAS 153

BLAST of Lsi03G022110 vs. NCBI nr
Match: gi|972127079|gb|KUI55903.1| (hypothetical protein VP1G_03314 [Valsa mali var. pyri])

HSP 1 Score: 154.5 bits (389), Expect = 3.1e-34
Identity = 93/258 (36.05%), Postives = 148/258 (57.36%), Query Frame = 1

Query: 1    MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRL 60
            M  GL++     RR++ LE   +D+  V ++LHHQ  +RRR +++S K+++ +  +L RL
Sbjct: 1264 MRRGLDDGLCPLRRISRLEDPTSDKDTVTSKLHHQGSVRRRCHSSSSKVHNRQTAQLSRL 1323

Query: 61   QNQIVRRSDLLGEGKDLIVVHVPQQP----DISHHGPHVPHRLNDIAGTSLALGSDHRRP 120
              +    + L  +  +  +    Q+     +I  H PHVPH L+D++   LALG+DH   
Sbjct: 1324 LEKRGITAQLPRQRTEANLALPGQRGLGPRNIRIHLPHVPHSLDDVSRAGLALGTDHGGA 1383

Query: 121  FTNTPQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSS 180
              N PQ LAEV A   E + E V +DV   +  S++  L+ ++D  G E+L+ +E+ D+ 
Sbjct: 1384 LGNAPQGLAEVPAPTHEGDPEAVLLDVEGIVRGSEDLGLVDVVDAQGLEDLALDEVADAG 1443

Query: 181  LRHDRNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHN 240
            L HD + + + D LD  RV H+  AA+ +DV R++ + HD AG+GL  D  LL VD VH+
Sbjct: 1444 LGHDGDGHGVLDLLDHGRVAHARHAAVLADVGRHTLEGHDRAGAGLLCDARLLRVDHVHD 1503

Query: 241  YASAEHLSQSNFHREGGL 255
             A+ EHL ++    EG L
Sbjct: 1504 DAALEHLGEAGLDGEGVL 1521

BLAST of Lsi03G022110 vs. NCBI nr
Match: gi|813208866|dbj|GAO50133.1| (hypothetical protein G7K_4268-t1 [Saitoella complicata NRRL Y-17804])

HSP 1 Score: 148.7 bits (374), Expect = 1.7e-32
Identity = 84/230 (36.52%), Postives = 128/230 (55.65%), Query Frame = 1

Query: 1   MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRL 60
           + + L++  G+  RV  LE TG++E  V  ELHH   I     TTS ++++ +  E   L
Sbjct: 91  VGDSLDDSLGTLSRVTGLEDTGSNEDTVTAELHHHGSISGGSDTTSSEVDNRQSLEASSL 150

Query: 61  QNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNT 120
             ++V    +LGE ++LIV       D+     HV   L+++ GT L LGSDH     + 
Sbjct: 151 LEKVVWDLQVLGEDEELIVRGGGSLADVGGDLAHVTDSLDNVTGTGLTLGSDHSSTLGDA 210

Query: 121 PQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHD 180
            + L +VT   DERN  +  VDVV  +   ++  L+  +D +G +NLS NE+TD+ L HD
Sbjct: 211 TESLTQVTGTTDERNLVVKLVDVVDVVGHGQDLGLVDEVDADGLKNLSLNEVTDADLSHD 270

Query: 181 RNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLG 231
            + + L D LD L V H+G+  + +DV R++ + HDG  +GL  DT LLG
Sbjct: 271 GDGDGLDDLLDHLGVGHTGNTTVPADVSRDTLEGHDGTSTGLLSDTGLLG 320

BLAST of Lsi03G022110 vs. NCBI nr
Match: gi|590111416|emb|CDN43164.1| (hypothetical protein BN871_CM_00100 [Paenibacillus sp. P22])

HSP 1 Score: 147.1 bits (370), Expect = 5.0e-32
Identity = 82/249 (32.93%), Postives = 138/249 (55.42%), Query Frame = 1

Query: 1   MSNGLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRL 60
           +S   ++ +G   RV  LE  GADE+AV+ ++HHQ  I  R +    +++  +   L+ +
Sbjct: 232 VSRRFHDGAGEFLRVVGLEDAGADEYAVSAQMHHQSRIGWRSHAACSEVDDRKLARLVHI 291

Query: 61  QNQIVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNT 120
           + Q+V  + + G    L++       D++    HV +  N++A + LALG+ HR  F + 
Sbjct: 292 EQQLVVDAQVFGFRIQLVLGQAFDLADLARDQAHVANGFNNVARSRLALGTHHRCAFLDA 351

Query: 121 PQRLAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHD 180
            Q LA++  +A ERN E   VD+  F+   ++FAL+ I+    F++  F+ M D+   HD
Sbjct: 352 AQSLAQILGSAYERNREFALVDMEHFVGRREHFALVDIVGAERFQHARFHIMADAGFGHD 411

Query: 181 RNRNSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASA 240
           R+ N L    ++ RV H+G AA G+D+ R++ K HD   +  FGD  LL V DVH+ A+ 
Sbjct: 412 RDGNDLHHLFEDSRVRHAGYAACGADIRRHALKGHDCRSACRFGDLGLLRVHDVHDDAAF 471

Query: 241 EHLSQSNFH 250
            H   ++F+
Sbjct: 472 LHFRHTSFN 480

BLAST of Lsi03G022110 vs. NCBI nr
Match: gi|895451263|emb|CNZ64250.1| (Uncharacterised protein [Mycobacterium tuberculosis])

HSP 1 Score: 139.0 bits (349), Expect = 1.4e-29
Identity = 81/243 (33.33%), Postives = 128/243 (52.67%), Query Frame = 1

Query: 4   GLNNRSGSPRRVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQ 63
           GL++R G+  R A LE+TG  E A+  +LHH   +  R  T  G+    +      L N+
Sbjct: 34  GLDDRGGAVLRGAGLENTGTHEDALGAKLHHHRRVGGRGDTPGGEQCDRQLARPSYLGNE 93

Query: 64  IVRRSDLLGEGKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNTPQR 123
            + R       K  ++ H  Q  D++  GPHV  R+ D++G  LALG DH R   + PQR
Sbjct: 94  FIGRLQFFCRDKQFVLRHRRQPADLTTDGPHVCGRVGDVSGPGLALGPDHGRSLADAPQR 153

Query: 124 LAEVTAAADERNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNR 183
           L E+     ER+ E+  VD+V  +S  ++  L+ ++D    ++L  +++ D+   H R+ 
Sbjct: 154 LTEIGRPTHERHREVPLVDMVGVVSGRQHLGLVDVVDAQRLQDLRLDKVADAHFSHHRDG 213

Query: 184 NSLFDFLDELRVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHL 243
           +   D LD + VTH    ALG+D+  + F+ H    +G  GD  LL  D+VH+ A+ EHL
Sbjct: 214 DRGDDALDHVGVTHPRHPALGADIGGHPFQRHYRNRTGALGDAGLLRGDNVHDDAALEHL 273

Query: 244 SQS 247
             +
Sbjct: 274 GHA 276

BLAST of Lsi03G022110 vs. NCBI nr
Match: gi|887403170|emb|CKR20752.1| (Uncharacterised protein [Mycobacterium tuberculosis])

HSP 1 Score: 132.5 bits (332), Expect = 1.3e-27
Identity = 77/233 (33.05%), Postives = 121/233 (51.93%), Query Frame = 1

Query: 14  RVAALEHTGADEHAVATELHHQCCIRRRRYTTSGKLNHWEPPELLRLQNQIVRRSDLLGE 73
           R A LE+TG  E A+  +LHH   +  R  T  G+    +      L N+ + R      
Sbjct: 3   RGAGLENTGTHEDALGAKLHHHRRVGGRGDTPGGEQCDRQLARPSYLGNEFIGRLQFFCR 62

Query: 74  GKDLIVVHVPQQPDISHHGPHVPHRLNDIAGTSLALGSDHRRPFTNTPQRLAEVTAAADE 133
            K  ++ H  Q  D++  GPHV  R+ D++G  LALG DH R   + PQRL E+     E
Sbjct: 63  DKQFVLRHRRQPADLTTDGPHVCGRVGDVSGPGLALGPDHGRSLADAPQRLTEIGRPTHE 122

Query: 134 RNAEIVFVDVVFFISESKNFALIHIIDTNGFENLSFNEMTDSSLRHDRNRNSLFDFLDEL 193
           R+ E+  VD+V  +S  ++  L+ ++D    ++L  +++ D+   H R+ +   D LD +
Sbjct: 123 RHREVPLVDMVGVVSGRQHLGLVDVVDAQRLQDLRLDKVADAHFSHHRDGDRGDDALDHV 182

Query: 194 RVTHSGDAALGSDVCRNSFKSHDGAGSGLFGDTSLLGVDDVHNYASAEHLSQS 247
            VTH    ALG+D+  + F+ H    +G  GD  LL  D+VH+ A+ EHL  +
Sbjct: 183 GVTHPRHPALGADIGGHPFQRHYRNRTGALGDAGLLRGDNVHDDAALEHLGHA 235

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0E9NK00_9ASCO1.2e-3236.52Uncharacterized protein OS=Saitoella complicata NRRL Y-17804 GN=G7K_4268-t1 PE=4... [more]
W8ZIE2_9BACL3.5e-3232.93Uncharacterized protein OS=Paenibacillus sp. P22 GN=BN871_CM_00100 PE=4 SV=1[more]
A0A0T9BVI9_MYCTX8.8e-2833.05Uncharacterised protein OS=Mycobacterium tuberculosis GN=ERS027659_00920 PE=4 SV... [more]
H0BMQ9_9ACTN3.3e-2738.00Putative uncharacterized protein OS=Streptomyces sp. W007 GN=SPW_6547 PE=4 SV=1[more]
A0A090Y697_PAEMA8.2e-2644.59Uncharacterized protein OS=Paenibacillus macerans GN=DJ90_6509 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|972127079|gb|KUI55903.1|3.1e-3436.05hypothetical protein VP1G_03314 [Valsa mali var. pyri][more]
gi|813208866|dbj|GAO50133.1|1.7e-3236.52hypothetical protein G7K_4268-t1 [Saitoella complicata NRRL Y-17804][more]
gi|590111416|emb|CDN43164.1|5.0e-3232.93hypothetical protein BN871_CM_00100 [Paenibacillus sp. P22][more]
gi|895451263|emb|CNZ64250.1|1.4e-2933.33Uncharacterised protein [Mycobacterium tuberculosis][more]
gi|887403170|emb|CKR20752.1|1.3e-2733.05Uncharacterised protein [Mycobacterium tuberculosis][more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G022110.1Lsi03G022110.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G022110Cucumber (Chinese Long) v3cuclsiB203
Lsi03G022110Cucumber (Chinese Long) v3cuclsiB298
Lsi03G022110Cucumber (Chinese Long) v3cuclsiB379
Lsi03G022110Watermelon (97103) v2lsiwmbB218
Lsi03G022110Watermelon (97103) v2lsiwmbB235
Lsi03G022110Watermelon (97103) v2lsiwmbB241
Lsi03G022110Wax gourdlsiwgoB299
Lsi03G022110Wax gourdlsiwgoB331
Lsi03G022110Wax gourdlsiwgoB339
Lsi03G022110Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi03G022110Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi03G022110Cucumber (Gy14) v1cgylsiB064
Lsi03G022110Cucumber (Gy14) v1cgylsiB296
Lsi03G022110Cucumber (Gy14) v1cgylsiB596
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB242
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB612
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB661
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB667
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB754
Lsi03G022110Cucurbita maxima (Rimu)cmalsiB799
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB230
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB408
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB599
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB656
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB658
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB747
Lsi03G022110Cucurbita moschata (Rifu)cmolsiB787
Lsi03G022110Cucurbita pepo (Zucchini)cpelsiB061
Lsi03G022110Cucurbita pepo (Zucchini)cpelsiB345
Lsi03G022110Cucurbita pepo (Zucchini)cpelsiB349
Lsi03G022110Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G022110Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G022110Wild cucumber (PI 183967)cpilsiB185
Lsi03G022110Wild cucumber (PI 183967)cpilsiB277
Lsi03G022110Wild cucumber (PI 183967)cpilsiB363
Lsi03G022110Cucumber (Chinese Long) v2culsiB187
Lsi03G022110Cucumber (Chinese Long) v2culsiB277
Lsi03G022110Cucumber (Chinese Long) v2culsiB358
Lsi03G022110Melon (DHL92) v3.5.1lsimeB236
Lsi03G022110Melon (DHL92) v3.5.1lsimeB260
Lsi03G022110Watermelon (Charleston Gray)lsiwcgB219
Lsi03G022110Watermelon (Charleston Gray)lsiwcgB241
Lsi03G022110Watermelon (Charleston Gray)lsiwcgB248
Lsi03G022110Watermelon (97103) v1lsiwmB240
Lsi03G022110Watermelon (97103) v1lsiwmB252
Lsi03G022110Watermelon (97103) v1lsiwmB267
Lsi03G022110Cucumber (Gy14) v2cgyblsiB171
Lsi03G022110Cucumber (Gy14) v2cgyblsiB258
Lsi03G022110Cucumber (Gy14) v2cgyblsiB326
Lsi03G022110Melon (DHL92) v3.6.1lsimedB246
Lsi03G022110Melon (DHL92) v3.6.1lsimedB273
Lsi03G022110Silver-seed gourdcarlsiB141
Lsi03G022110Silver-seed gourdcarlsiB529
Lsi03G022110Silver-seed gourdcarlsiB604
Lsi03G022110Silver-seed gourdcarlsiB915