Lsi03G021660 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G021660
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 32769482 .. 32774859 (+)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCCGGAACTCAAAGACGCCGAGAAATCCAGCCCAGCAGCGGCCCATAGTTAGCGTCAGGTCGCTGCTCCTTCCGTCCGAACCTTCGTCGTTGCCACTTTTCCGCAACTCGAAGTTCATCTTCTATCCTCCGCTCCTCGCGCGGTTCAATTCAACATTACATATGCCGAGAGACAAAGGAGAATCAGTCCCTAAACCGATCGACGAGGGGGACGAAACGAGGGTAGGTCAGAAAGTTATTTCGAAATTATATTATTGAGTCTAGTGAAATCATATATGGCTTCTTCCACGGATGAATGTATATTTAGATTCATTTATAAAGTACCTTTGTAATTGTAGTTTTGGGCATTAGTTAATCGATGTTTGGAATGGACTTGTAGCTTGATTCACTTTCTGTATGTATGTGGCCTGTACACGCTGTGTGTTGCTTGTATCAGAAGAATAGGAACCATTTCAATTCGGTTGGCCATAAAGGGCAGAAGAAATTTGCACAAAGGGGGGTGGGAGTGGGACATATAATTGGAAAGAAAGAACGTTTATTAGTAAAGTAGAAATATAGACACTTTTGAGAGGAAAGGCTCTCACACTCTCTAATCTCTAATATCATATATAATTCCTTGAAAATCTATTGAATTTTCCAATATCTTGTGTTGGAACTTAGGACAGGTTTTACAGTTTTCCTTTACCATTCTGTATTTGTTCTACTTTTACATTATTTCCTTTCTATTTAAGATTTATTTTTCTGTTATTATTTGTCAAAGTACTATTGAGATGCGGGGCTGTAATATCCTCTATTAAATCTTGAAGAAATTGGCACAAAAGGAAAAAGAGACAATCACTTGGAAAAAAGAACTGTTATTAAGGAAGTACAAATATGGACATCAAGAACCTTTTCACTCTCTCAATAATCACTCACTCACTCACTTCTTTTTGCTTTTTTCACTATTTCTAAGTTTCTCTAAGTTTCTTTAACTTCCTATAATTTGACTTACAAATGAAAAAACTCCTATTTATAGGATACAAGATCCTTGGAGCCCAAGTGAAATGATTTTTCTAGACCCTTTTTGGATTCTTAAATATCCCAGATATTTTTTAGAATCTTTTCCTTATTTAAATTAATTCTTTAGAATCCCATGGATCCTAAAGAATATCAAGATTTTTCTAGAGCCTTTCTTTGAGGTATTTATGTATACACTTTAACATGGTTATAGAGAGGTCTAATTTATACATTTGGGTCACCTTTTAGATACTTCAAGAAGCTTCTAGAGAACATCCTTAAAATTTTGATGAGCTAAAAATGATTGATTTTGGAGAGCCAGATGTCTAAGTGGAATAGCTGATTTCTTAAACTATGTCCTGAAGAAAGTTTTATCTTACAAGTTATTACGTGCTGATCACAAACTTATTGTTATTAATTCACTGTTTTAGTGCATTTTTCAAGTGTTGCAATTAATATTTAAAAATGTTACCTTTCTTCCATGGAGTTATCTATGTGATCAACTATTGCTTGTGCCTAATTAATGAATGTCCATCTATTTGCAGGTGTAGAAATAAAAACTTAATCAGTTGATGTTGGAAGAATTTATTAGAGCTAAGCATCCGATATCTCCCTCTCCAACCCCATATCCACACCGCTATTTATCTGAATCAAGGTGTGCTACCTGCATTTTCATTCTTTCATCTTCTTCAGCCTGCAAGTTGGTGATCCTTGCATGCCTTTCTTTTTAATATCACAAAGAGTTTAACAAACCGAGCCAGTTGCATGTGCCTGCCACTGTGTATAAGGTTTTCATGGACCTACAAAAAAAAGTGCACGATTAGAATTATTTAGGTCTCAAAAAAATCAAAAGTAACTCCTTTGAATAAGATTACATGTATACTTCTTTTGTAACCTTAGAATTTGAGTACCACTAGGAATATTGTGGGAAATAATTAGAGCATTAAGGGTATATTAGCAATTAGTTAAGGAGTTTGTTGGAGAAGTTTGTTTATAAATACGTCTACTAGGCAAGGAGGAGGGTAAGCAATATTTTGTGGTATGAATTAGGACTTGAGAGTATTCTCAAGATGGGAGGGTCCAAGTACCTTAGGGCATGTTTGGTAGAGAATCTAGATTCTATTTTATGTTTTTAGATTCACTGAGTCAGCAAATATGTGTTTGGCAAACAACCCAAATTCTATTTTTTAAAATTGTTTTAACAACATTTTTTTATTTTCATTGTATTCATATTTTGAATTTTAAATTTTAAAATGTAAAATTATATTAAATAAAGATTAAAACGTTTAGAAATACCATTTGTCATGTTAGAAATTCAATTCATTTGTAAAAAAAATATAATATGTATTATGTAATTTATTATAAATTATATAATATTTCAAAATAGTAATTATATAATTTTTTTAAAAAATAAATCATATTCATAAAAAATTAGTAATAGTTTATTGTCCACTACATATTAGTGGGTAACTAGTTTTACGATTTGTAAATATATAGTATCAAACACATTTTAAACAACTGTTTAAATTAGAATTCAATTTTTGAATTTGCTACCAAACACATATCTGAAAACATGAAATACAACTTTGTTTTTATTGAATTTCTTGTTTTCAAATTCTCTACCAAACATACCTTTAATTACTTGGTTCATCATATATTTCAGCTATCTTTTATAGTTCAATATTGTAACGCCCCAGGCCCAAGATTCGGAATCCGAATTCAGCAACTAATGGCCCCGACATTCCCCTGCGGCCCGATCGTCATCCTTAACTGTCTTAAATGCTTCCATGAGTGAACGTTGTCCCTACATACCAATACGGGTCCTTTCAGCATGCTTTGTCCTCACTCACATGCATTCTAGGAAAATCCCCAGGAGGTCACCCAACATAGGATTGCTTCAAGCTAAGCACGCTTAACTCTGGAGTTCTTATGATTGAACTACCGAAAAGGAAGACGCACCTTGTTGGTATAGGTAGTAACTTTCATTTCTTTTAAGCCTTTCTTAATCATGCTTTCATGTCCTCAGGATCCCTCTCATTCGGATGTGATCTCGGTTCATTCATGTCCCCCTCCTGAACTCGGGTCGTTACATGCCCACCAGCTTCCGCTTGGTTCGTCCCCACCTTACTGGGAGAGGTTCCGCTCTAATACCATCTGTAACGCCCCAGGCCCAGGATTCGGCAACTGATGGCCCTGGCATTCCCCTACGTCCCTGGCATCCGCGTCGATCCTTAGGGCGGCACGAAGCGCTGCGGCGAAAGTTTGGGGCTCTATCGCGTGCACCAACCCTCGTATTCCGCTCCTCAAGCCTTGAATAAACATTTCTGTCCTGTCCTTCTCGGTGGCCACAAGTCTTGGGGCAAAATGGGACAGCTTGTCAAATTCCTGCTCGTACTCCTCTACTGTCATGGTTCCTTGCTTCAAATTCAAGAACTCTGGTTGTTTACTGTGCCGGGTGTAGGCCGAAAAATACTTTTTGTAGAAACGCTCCTTGAATTGCTCCCAGGATGCGAGCCCTCCGTTCGTGTCTATAGTCTTCTCTGTTGAGCGCCACCAAATCTCTGTATTGTTTGTCAACACGAACACGGCACACTGAAGTTTCTGGTCATCTGGACACTTCATATAGCGAAAAATTTTCTCAATCGATGACAACCACATTTCCGCCTTTGTAGGATCCTTAAGTGACCCATCGAAGGTGCAAGGGTTATACTTCCTGAAATCCCTCAGATGTTTAGCTTCAACAAATAGCTCTTGCACATTCTGCTGTGGGGCCTGCCCCTGTGGTGTTTGAGCTGGTTGGGCGGTTGCCTGCTGGGACTGGGCGAACTGGGCCAGTCGCTCATCATCAGTCGCTCAGTATGACGCTCAATATGAAAGAGATGATGGATGAGCGACTGGGGCGTTACAAATATATTCAAATTCTATCATATTACATTACTCTGATTCAACCAAGTGCGTTCATATGGAAAGAGGTTCCCCAAGTCCTATGAAATAAAGACGAGCCATGCTTATTTGTATGGAATCTTGGAACTTGGAAGAATTCGCAAATGGATATTTATCCCCAAATCAGTCGACCACAAAATTGTAGTAAATGGATGGGGAAAGGTTAGTGGTCCTTCAGTCAATTTTTATTCACATGCAAATGTATTCATCCGTCTTATTTTTGAGATTTGTGACATTTAAAAAGGGTCAACTTTATTTCAATATTTGTATATTTTCCCTGGGTGTTGAGTGTTGCTTCCCGTGCTTCACCGTCTCAAACAAGTCCTGTGAGTGGGGACTTCTTAGTTTCAAAATAAAATAACAAATTGTGGTTATACTACAATGAGTTAAAGATCCAAATGCAACTTTGTCAAAGAAATTTATTTCAATACTTGTAAATTTAGCTGTCCTATCCTGCACCATTTGGATCAAACCCCAGAAATCTGTTCTGCATTTAAGGAGGAAAAGAAATAGGACTATGGTTGGTGCAATCAATTTGGATGGTTAGGTGGCACCTTCTTATTAATTGCCCCATTACTAAATTGTGATTCCACCTCTTTTGGGTATATAGTAGCAACCGTGTTTCGCAAGGTTATACTTGTTAATCTCATTTCTAGTACTATACTACTATAGAATACTGCTACATTAATCTGATGTAATTTAGTTATCATATTTTGACCTGAAGATCTATGACTTGTTATGTCCAGAATCTGCTTTACATCCTGTTATTGTTGGGTGTGAAACCGACCATTTGAAGATGAGTGTCATTGGACAGTGAAGGAAAAAGTTGAAGAAAAGCAAGGGCATCCCTGCAAGAAATCCTTTTTGTGATATTCTGTCAACAGGCAGCGAGGACTGATGGAAAGTGAACTTCACTTTCTACAGAAGAGTTCATGTATTTGATATTCATAACCTCAGTGACAACCGATCCTTTTGCATTATTCTTGTAAAAAGGAAGCTAAAAATTTTCAACACGTATGAAATCACAATAACACTAATTCTAATGCTGCAACTTCTTAGTCTCAGCATTTCAGTGCCCTCACTTTCCTGTTATTTCCCCTCAAATTTTGTGACTTGTGTGAAATTCTGCTTTGCTTTCTAAGTTCAAAGGTGGTATGCGATCTGATCCCAAACATTGTCTACTCTGATTGTGCTGTTCATCAACTTGCAGGTCCACTGAGTTAAGAAAGTTAAGGGCACCCCCTTAAAGGGAAGAAACCCATCAAGCTTATTTGGAGGGAACTATAAAAATTATTGAAATCTCTTGAATGTATTGTTTATGTTGTTCAACTCGCAAGTCCACTGAGTTAAACCTAAGTAGAATTCATATTTAGCGTAGTGCACTATATACTCTAAGGAACCACTATTATTGAACATTCTTTCTAACATACTATTAG

mRNA sequence

ATGGGCCGGAACTCAAAGACGCCGAGAAATCCAGCCCAGCAGCGGCCCATAGTTAGCGTCAGGTCGCTGCTCCTTCCGTCCGAACCTTCGTCGTTGCCACTTTTCCGCAACTCGAAGTTCATCTTCTATCCTCCGCTCCTCGCGCGGTTCAATTCAACATTACATATGCCGAGAGACAAAGGAGAATCAGTCCCTAAACCGATCGACGAGGGGGACGAAACGAGGGTAGAATCTGCTTTACATCCTGTTATTGTTGGGTGTGAAACCGACCATTTGAAGATGAGTGTCATTGGACAGTGAAGGAAAAAGTTGAAGAAAAGCAAGGGCATCCCTGCAAGAAATCCTTTTTGTGATATTCTGTCAACAGGCAGCGAGGACTGATGGAAAGTGAACTTCACTTTCTACAGAAGAGTTCATGTATTTGATATTCATAACCTCAGTGACAACCGATCCTTTTGCATTATTCTTGTAAAAAGGAAGCTAAAAATTTTCAACACGTATGAAATCACAATAACACTAATTCTAATGCTGCAACTTCTTAGTCTCAGCATTTCAGTGCCCTCACTTTCCTGTTATTTCCCCTCAAATTTTGTGACTTGTGTGAAATTCTGCTTTGCTTTCTAAGTTCAAAGGTGGTATGCGATCTGATCCCAAACATTGTCTACTCTGATTGTGCTGTTCATCAACTTGCAGGTCCACTGAGTTAAGAAAGTTAAGGGCACCCCCTTAAAGGGAAGAAACCCATCAAGCTTATTTGGAGGGAACTATAAAAATTATTGAAATCTCTTGAATGTATTGTTTATGTTGTTCAACTCGCAAGTCCACTGAGTTAAACCTAAGTAGAATTCATATTTAGCGTAGTGCACTATATACTCTAAGGAACCACTATTATTGAACATTCTTTCTAACATACTATTAG

Coding sequence (CDS)

ATGGGCCGGAACTCAAAGACGCCGAGAAATCCAGCCCAGCAGCGGCCCATAGTTAGCGTCAGGTCGCTGCTCCTTCCGTCCGAACCTTCGTCGTTGCCACTTTTCCGCAACTCGAAGTTCATCTTCTATCCTCCGCTCCTCGCGCGGTTCAATTCAACATTACATATGCCGAGAGACAAAGGAGAATCAGTCCCTAAACCGATCGACGAGGGGGACGAAACGAGGGTAGAATCTGCTTTACATCCTGTTATTGTTGGGTGTGAAACCGACCATTTGAAGATGAGTGTCATTGGACAGTGA

Protein sequence

MGRNSKTPRNPAQQRPIVSVRSLLLPSEPSSLPLFRNSKFIFYPPLLARFNSTLHMPRDKGESVPKPIDEGDETRVESALHPVIVGCETDHLKMSVIGQ
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G021660.1Lsi03G021660.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G021660Cucumber (Gy14) v2cgyblsiB042
Lsi03G021660Cucumber (Gy14) v2cgyblsiB171
Lsi03G021660Cucumber (Gy14) v2cgyblsiB258
Lsi03G021660Cucumber (Gy14) v2cgyblsiB326
Lsi03G021660Cucumber (Gy14) v2cgyblsiB408
Lsi03G021660Melon (DHL92) v3.6.1lsimedB258
Lsi03G021660Melon (DHL92) v3.6.1lsimedB270
Lsi03G021660Melon (DHL92) v3.6.1lsimedB273
Lsi03G021660Melon (DHL92) v3.6.1lsimedB288
Lsi03G021660Silver-seed gourdcarlsiB020
Lsi03G021660Silver-seed gourdcarlsiB141
Lsi03G021660Silver-seed gourdcarlsiB504
Lsi03G021660Silver-seed gourdcarlsiB529
Lsi03G021660Silver-seed gourdcarlsiB915
Lsi03G021660Wax gourdlsiwgoB293
Lsi03G021660Cucumber (Chinese Long) v3cuclsiB203
Lsi03G021660Cucumber (Chinese Long) v3cuclsiB298
Lsi03G021660Cucumber (Chinese Long) v3cuclsiB379
Lsi03G021660Cucumber (Chinese Long) v3cuclsiB472
Lsi03G021660Watermelon (97103) v2lsiwmbB218
Lsi03G021660Watermelon (97103) v2lsiwmbB225
Lsi03G021660Watermelon (97103) v2lsiwmbB235
Lsi03G021660Watermelon (97103) v2lsiwmbB241
Lsi03G021660Wax gourdlsiwgoB299
Lsi03G021660Wax gourdlsiwgoB325
Lsi03G021660Wax gourdlsiwgoB331
Lsi03G021660Bottle gourd (USVL1VR-Ls)lsilsiB071
Lsi03G021660Bottle gourd (USVL1VR-Ls)lsilsiB095
Lsi03G021660Bottle gourd (USVL1VR-Ls)lsilsiB125
Lsi03G021660Bottle gourd (USVL1VR-Ls)lsilsiB127
Lsi03G021660Cucumber (Gy14) v1cgylsiB064
Lsi03G021660Cucumber (Gy14) v1cgylsiB215
Lsi03G021660Cucumber (Gy14) v1cgylsiB296
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB242
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB275
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB612
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB661
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB665
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB754
Lsi03G021660Cucurbita maxima (Rimu)cmalsiB799
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB230
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB264
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB599
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB652
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB658
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB747
Lsi03G021660Cucurbita moschata (Rifu)cmolsiB787
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB061
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB347
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB349
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB404
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G021660Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G021660Wild cucumber (PI 183967)cpilsiB185
Lsi03G021660Wild cucumber (PI 183967)cpilsiB277
Lsi03G021660Wild cucumber (PI 183967)cpilsiB449
Lsi03G021660Cucumber (Chinese Long) v2culsiB187
Lsi03G021660Cucumber (Chinese Long) v2culsiB277
Lsi03G021660Cucumber (Chinese Long) v2culsiB442
Lsi03G021660Melon (DHL92) v3.5.1lsimeB257
Lsi03G021660Melon (DHL92) v3.5.1lsimeB260
Lsi03G021660Melon (DHL92) v3.5.1lsimeB275
Lsi03G021660Watermelon (Charleston Gray)lsiwcgB219
Lsi03G021660Watermelon (Charleston Gray)lsiwcgB228
Lsi03G021660Watermelon (Charleston Gray)lsiwcgB241
Lsi03G021660Watermelon (Charleston Gray)lsiwcgB248
Lsi03G021660Watermelon (97103) v1lsiwmB240
Lsi03G021660Watermelon (97103) v1lsiwmB267
Lsi03G021660Watermelon (97103) v1lsiwmB276