Lsi03G019180 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi03G019180
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionUnknown protein
Locationchr03 : 30563462 .. 30564986 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATGCATTATTTCTTAGCCTCGTATGTGTTCAAATGATGTGCGCATTTGAGATATCTTGCAAATACACAACGATACAGGTTTCTTCTAAACATATGTGGAATGATGAGAAAACAGTTCATCTATTAAAAGCTTGTTCAAGAACCATAGTGTCAAACCAGATTGTAATCCTAAAGGTGAGAATTAGTTTGTGATGGTAGCATGAAGTTCAATTATTTTTCTCCAGCACTTCAAACAGATTTTCATCTTCTGTTTTCCAATTTGTTAGATACATAACATAATAAAAACAGCAAAGAAAGTGTTGCATGTATCTAGAGCTCCAAGTGCAATCATGTGCTGTGAAGACGGAGAAAGTAGAATCTCAAGTTCTGCAGTGCTTGTGTGGAGCAGGAATAAGTTGGTAGTTTGTATGTTTCAGCGTGTCCAGGAACTGCCAAATCTTTGTCCGTGGAAAGGGTGAAATTTCTATCAAGGTATGGATTTAAAAAACTCTAAATGTTTGTTCCTTTAGTGTTTCATGTGCTTTTCTACTATTTGTTTTTGGTTGATGATGGGTGAAGCCCAACCACAAAAAGGCATAATCATCTTGCATGAAGATGATGGAAAAATTTAGTATTTTTAATATGCAATTTTGATAGGTATGCCTGCCAATGACAGGTATAATTCAGAATCTCTAAACAAATAATTGCCAAGTAATAATAATAAGCATTAAGTGCCATTAGATTGCAAATGGTTGGTTGTTATCTATGGAAATGTCTTCCTTGGATGATCGATTTGGCTCATCTCATCTAAAGGTCTCTTCATGGTGTTCTCTTTCTAAAAGCTTTGCAAGATATGCTATTGAGGATATTTGTCTCAATTGGAATGCTTTTATGTTGCTCTCATAATTCATTTATGTCATGTTGTTTTATTTTATTTGCTATTATTGTTTTTGTATCCCCTTTTGAGTTTCTTATATTTTTTAGCATTAGATTGCAAAGTGATTGTTTCTTTTTTAAAAAAAAAACTTACCGGCCACATGCGACTTACCAAAGAAACGATACAATAGAGACCTGTCATCTAAAATGATTTCTCTGGTTCTGATACTAACTAATTGACTTTAGAAGATTAAACTACATGTTTTCCTTTTCCATGAGTAGCAAAGTTTAGGTGAAAAGTAAAAATGAAAGTAGTCCGATTCAACTCAGTTTATTGTTTATGCATCTCAGTTTCACAACAATATGCATTGTTTCAAATATTTTCCTTTGAGGCTTATAAATATTGTATCCATATCATTTTATGCTTTGTTGTGAAACTTGTTCATAGAGAAAAAAGAATGATACAACTATAGGAGTGGTGGGTTCTCTCAGTTTCTAAGATAACTTTTTAAAAGATAAATAACAATGAATGAATATTGTGTGCTACTGTTACATTTTACATGCAACTAAACAAATCATGAAGAAATCTACAAATCAACACTAATCAAGAGAGATCAATGCTTCTCTGTTGAATGTTGGGATATTAGAAGGGGGCAGTCATTAACCT

mRNA sequence

ATGAATGCATTATTTCTTAGCCTCGTATGTGTTCAAATGATGTGCGCATTTGAGATATCTTGCAAATACACAACGATACAGGTTTCTTCTAAACATATGTGGAATGATGAGAAAACAGTTCATCTATTAAAAGCTTGTTCAAGAACCATAGTGTCAAACCAGATTGTAATCCTAAAGATACATAACATAATAAAAACAGCAAAGAAAGTGTTGCATGTATCTAGAGCTCCAAGTGCAATCATGTGCTGTGAAGACGGAGAAAGTAGAATCTCAAGTTCTGCAGTGCTTGTGTGGAGCAGGAATAAGTTGGTAGTTTGTATGTTTCAGCGTGTCCAGGAACTGCCAAATCTTTGTCCGTGGAAAGGGTGAAATTTCTATCAAGGTATGGATTTAAAAAACTCTAAATGTTTGTTCCTTTAGTGTTTCATGTGCTTTTCTACTATTTGTTTTTGGTTGATGATGGGTGAAGCCCAACCACAAAAAGGCATAATCATCTTGCATGAAGATGATGGAAAAATTTAGTATTTTTAATATGCAATTTTGATAGGTATGCCTGCCAATGACAGGTATAATTCAGAATCTCTAAACAAATAATTGCCAAGTAATAATAATAAGCATTAAGTGCCATTAGATTGCAAATGGTTGGTTGTTATCTATGGAAATGTCTTCCTTGGATGATCGATTTGGCTCATCTCATCTAAAGGTCTCTTCATGGTGTTCTCTTTCTAAAAGCTTTGCAAGATATGCTATTGAGGATATTTGTCTCAATTGGAATGCTTTTATGTTGCTCTCATAATTCATTTATGTCATGTTGTTTTATTTTATTTGCTATTATTGTTTTTGTATCCCCTTTTGAGTTTCTTATATTTTTTAGCATTAGATTGCAAAGTGATTGTTTCTTTTTTAAAAAAAAAACTTACCGGCCACATGCGACTTACCAAAGAAACGATACAATAGAGACCTGTCATCTAAAATGATTTCTCTGGTTCTGATACTAACTAATTGACTTTAGAAGATTAAACTACATGTTTTCCTTTTCCATGAGTAGCAAAGTTTAGGTGAAAAGTAAAAATGAAAGTAGTCCGATTCAACTCAGTTTATTGTTTATGCATCTCAGTTTCACAACAATATGCATTGTTTCAAATATTTTCCTTTGAGGCTTATAAATATTGTATCCATATCATTTTATGCTTTGTTGTGAAACTTGTTCATAGAGAAAAAAGAATGATACAACTATAGGAGTGGTGGGTTCTCTCAGTTTCTAAGATAACTTTTTAAAAGATAAATAACAATGAATGAATATTGTGTGCTACTGTTACATTTTACATGCAACTAAACAAATCATGAAGAAATCTACAAATCAACACTAATCAAGAGAGATCAATGCTTCTCTGTTGAATGTTGGGATATTAGAAGGGGGCAGTCATTAACCT

Coding sequence (CDS)

ATGAATGCATTATTTCTTAGCCTCGTATGTGTTCAAATGATGTGCGCATTTGAGATATCTTGCAAATACACAACGATACAGGTTTCTTCTAAACATATGTGGAATGATGAGAAAACAGTTCATCTATTAAAAGCTTGTTCAAGAACCATAGTGTCAAACCAGATTGTAATCCTAAAGATACATAACATAATAAAAACAGCAAAGAAAGTGTTGCATGTATCTAGAGCTCCAAGTGCAATCATGTGCTGTGAAGACGGAGAAAGTAGAATCTCAAGTTCTGCAGTGCTTGTGTGGAGCAGGAATAAGTTGGTAGTTTGTATGTTTCAGCGTGTCCAGGAACTGCCAAATCTTTGTCCGTGGAAAGGGTGA

Protein sequence

MNALFLSLVCVQMMCAFEISCKYTTIQVSSKHMWNDEKTVHLLKACSRTIVSNQIVILKIHNIIKTAKKVLHVSRAPSAIMCCEDGESRISSSAVLVWSRNKLVVCMFQRVQELPNLCPWKG
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G019180.1Lsi03G019180.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G019180Cucumber (Chinese Long) v3cuclsiB203
Lsi03G019180Cucumber (Chinese Long) v3cuclsiB474
Lsi03G019180Cucumber (Chinese Long) v3cuclsiB476
Lsi03G019180Watermelon (97103) v2lsiwmbB218
Lsi03G019180Watermelon (97103) v2lsiwmbB228
Lsi03G019180Watermelon (97103) v2lsiwmbB235
Lsi03G019180Wax gourdlsiwgoB308
Lsi03G019180Wax gourdlsiwgoB332
Lsi03G019180Bottle gourd (USVL1VR-Ls)lsilsiB040
Lsi03G019180Bottle gourd (USVL1VR-Ls)lsilsiB070
Lsi03G019180Cucumber (Gy14) v1cgylsiB088
Lsi03G019180Cucumber (Gy14) v1cgylsiB612
Lsi03G019180Cucumber (Gy14) v1cgylsiB627
Lsi03G019180Cucurbita maxima (Rimu)cmalsiB242
Lsi03G019180Cucurbita maxima (Rimu)cmalsiB609
Lsi03G019180Cucurbita maxima (Rimu)cmalsiB754
Lsi03G019180Cucurbita maxima (Rimu)cmalsiB800
Lsi03G019180Cucurbita moschata (Rifu)cmolsiB230
Lsi03G019180Cucurbita moschata (Rifu)cmolsiB597
Lsi03G019180Cucurbita moschata (Rifu)cmolsiB747
Lsi03G019180Cucurbita moschata (Rifu)cmolsiB787
Lsi03G019180Cucurbita pepo (Zucchini)cpelsiB062
Lsi03G019180Cucurbita pepo (Zucchini)cpelsiB404
Lsi03G019180Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G019180Cucurbita pepo (Zucchini)cpelsiB707
Lsi03G019180Wild cucumber (PI 183967)cpilsiB185
Lsi03G019180Wild cucumber (PI 183967)cpilsiB452
Lsi03G019180Wild cucumber (PI 183967)cpilsiB453
Lsi03G019180Cucumber (Chinese Long) v2culsiB187
Lsi03G019180Cucumber (Chinese Long) v2culsiB445
Lsi03G019180Cucumber (Chinese Long) v2culsiB447
Lsi03G019180Melon (DHL92) v3.5.1lsimeB242
Lsi03G019180Melon (DHL92) v3.5.1lsimeB260
Lsi03G019180Melon (DHL92) v3.5.1lsimeB274
Lsi03G019180Watermelon (Charleston Gray)lsiwcgB219
Lsi03G019180Watermelon (Charleston Gray)lsiwcgB235
Lsi03G019180Watermelon (Charleston Gray)lsiwcgB241
Lsi03G019180Watermelon (97103) v1lsiwmB271
Lsi03G019180Watermelon (97103) v1lsiwmB240
Lsi03G019180Watermelon (97103) v1lsiwmB267
Lsi03G019180Cucumber (Gy14) v2cgyblsiB171
Lsi03G019180Cucumber (Gy14) v2cgyblsiB410
Lsi03G019180Cucumber (Gy14) v2cgyblsiB412
Lsi03G019180Melon (DHL92) v3.6.1lsimedB253
Lsi03G019180Melon (DHL92) v3.6.1lsimedB273
Lsi03G019180Melon (DHL92) v3.6.1lsimedB287
Lsi03G019180Silver-seed gourdcarlsiB136
Lsi03G019180Silver-seed gourdcarlsiB215
Lsi03G019180Silver-seed gourdcarlsiB225
Lsi03G019180Silver-seed gourdcarlsiB744
Lsi03G019180Silver-seed gourdcarlsiB745
Lsi03G019180Wax gourdlsiwgoB293