Lsi03G015310 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGCCTCAAAGAAGGAGCGGAGCCACCGGCGGTGACGATCAACTTCACGCCGCCGCCAGAAACGGCGACTTGAGTTCCGTCATTTCTATTTTGGCATCTAACCCTTCGTCTGTCAATTACAGAGATAAGCACTCCCGGACTCCGTATCCTTATGTTTCATTCTGTTAATTGTTATTTCCAGACTCAATTTTTTAGAATTTTGTGCGAATCATCATGCCTTCTTTCTGCTTAGCTCAAATCTTTGGGATGTGTTAATTATAGCTTTGTTTGATTCAGTTTGAGTTCAATTAAATTGAAGTTGCTTAGGTTAGATTGGTTTAGGTAGCTTCTAATGGTTGTTTCTAGGTTGAATCAACCGAACAAATCCAAGTAAATTAATTTCTAAAAGCTATCTTAATATGAGGATATTTTATTATCCACCCAAGTACTCTTTCTTAAGTCTTGTATCCTTCAATAATTTTTGGAAAATAATATGGCTATTTCTGTTTTATTTTTTTATTTTTTTGGATAATAAATTTTAGGGTAAATGAATCAAACAATCTAAATCCATCTAATGCTGCATGGTGATTGGTGATTGAATTGAGTTTTGTCACATAATTAGAGTCATTTGAGGAGTGAGTTTGAGTATATTCATTGAATCCAAAAGACATCTTGCATAAATATTTTGATGAATCTAGAGTTGTCGATGAAGTAAAGTTGCACCATTACTTTTTATCTATGAAGGAAGAGAAACCAATATGTAATTATAATTTTTCATTAAAAAAAATTTCCTTCAAAAGTTCTTTTTCAAGCCTGTCACTGGCTTAATGAGAAGAGTCTTATAACTTTTAATTTGTTTCTTGTTGAGTGATTTTTAAGCTTTCATTGTGAGACTTTGGATGGATTTTTGCCTTCGCGGCTACTATGAAATCTAGGCTTCGTGAAGTAATAGGGGGAGTAGATAATATCTAAACTGTCAAGAGATTGATAAACAGGGCATACAGATCATTCTGAAAATATTGGATAACTGGTTGTCTTCAAATTTTGCTGTTGCTCTACAACACTGCATCTTATCATGCATTATTTCTTTTTCTGTTGATAGAATAGGTCGTTGGCTTGTTATATCATAAAGAGAGGGAGGGGGTGTACTGGTTCTCCTATTATTTGATAGCTTATCCTGAAAAAGCATGTTAGGACATTAATTCTAAAGATTAGAAAATTAGGAATTATATGCCTGCTTGCAAACTAACGAGCAGAAATCTTGGAATTAATCCTCAATGATCTGCCTTTTATTGACTAATTACTAAATAAATGAAGGAAAATTTTCACCTATATGCCTGCTGCTTCCATGAAGCACAGCAAGACGTTTTGCTGTAACTTAAATCCAGTTCTTTGGGAAGATTTCCGTTTTTCACCTTGTATTTAGCTTAGGGAGTTAATTTTAACATTTCAACTTTTAGTTTCATCAATTTAAATTCTAAACTGAAGCAGGGCATTTGATGCCCTCAATGAGTTAAATTTTCATTTCTTTTTAACAAGTTTTAGCTTATTGCAAGTGTTCTTAGGGCTGTACCAGACTATTTTGTGGGTACTAGTTCTACAAATCATGCTTCAGCTAGGATTGTGCATTCCATTGCTGAATTTGGTTTTTTTTTTTTACCTACTTATTTGTGGCTTGGTTCGGGCATTTTCATGGTTGAGTTTTACTTCTGTTTGTGGCTTTGTTGGTTGAATTTTTTGGGGATGTGGTTTGGTTGATTCACGAGCGATTTTCACATATAGTTTTAAGAAGGTATTTCATTTCTTCAAGTTTAAGGTTTGACTTGATTAAATTGAAAATTGTATAGGAGTAAAAAATGAAATATTATCAAATTTTTTCCAAGAAACCCTGCTTGTAGAGTTTCTGCTTCAGTGGGGCTCCTGGTGTACTAATGCTGATTAATTTCATACCAGAGATGCTCGATCAATCCTCCTGCCCAGCATCTTTTACTATCTCAGTTAAGGGTTGTATTCAAGTTCTTGAAAGTCTTGTTTACCTTGCGCCTTGAACTTTATCACAATCTATGATGCTTGACAGATTGTTAAGTTGCTTTTATCTTTTCAATCTCAGGATTTCAGCTGGCTCGACCAGCTAGCTGTCACTTATTTTTGTTATTTTTCGCCAATAGGTTAATTCTAGCATCTTAGCACTTTGATTGTATTTCCTTGACTATAGCAAACTTTGGAATATAGACTGCATTTAGCAGCATGGTCTGGACAAGCAGAGGTTATAAACTATCTATGCAAGAACAAGGCCGATGTTGGCGCTGCTGCCATGGATGATATGGCCGCAATACATTTTGCATCTCAGAAGGGACATTTGGAAGTAGTTCGTACTTTGATCTCATGTGGCGGATCGGTAAAAGCTTCTACTCGAAAGGGTATGACCCCACTGCACTATGCCGTGCAAGGTTCGTATTTGGAGCTTGTTAAATACTTAGCAAAGAAAGGTGCAAGTTTGAGTGCTAGAACGAAGGCAGGACAAACCCCTCTTGATTTGGCTAGTAATGACGAAATCCGCTTGTTCTTGGAAGAACACGAAAAATCATCTAAGAAAGGAGAGTTAAAAGATAAAGGGAAAGCCGGGACAACTCATTTGCAGCAACCAGTGTCGGGAGAAGATGAGGCACCCACTGCAAAGGCAAACAAAACCGAAAATGAAGAAGATTCGGGGGTTGAGCAGTCAAAGAAGCAGAGTGATGAAGAAGACCAGGTGGACGAGCAATCGAAGAGGAAGAGTGATGGGGCTGTTGGTGAGGAAGCCTTATCAAAACGGAAGAAGGCGAAAGTTGCCCTTGGCCATCTTCTAACATCGGATGACACACATGAGGACGATGAAGACTCATAA ATGGGAAGGCCTCAAAGAAGGAGCGGAGCCACCGGCGGTGACGATCAACTTCACGCCGCCGCCAGAAACGGCGACTTGAGTTCCGTCATTTCTATTTTGGCATCTAACCCTTCGTCTGTCAATTACAGAGATAAGCACTCCCGGACTCCGTATCCTTATCAAACTTTGGAATATAGACTGCATTTAGCAGCATGGTCTGGACAAGCAGAGGTTATAAACTATCTATGCAAGAACAAGGCCGATGTTGGCGCTGCTGCCATGGATGATATGGCCGCAATACATTTTGCATCTCAGAAGGGACATTTGGAAGTAGTTCGTACTTTGATCTCATGTGGCGGATCGGTAAAAGCTTCTACTCGAAAGGGTATGACCCCACTGCACTATGCCGTGCAAGGTTCGTATTTGGAGCTTGTTAAATACTTAGCAAAGAAAGGTGCAAGTTTGAGTGCTAGAACGAAGGCAGGACAAACCCCTCTTGATTTGGCTAGTAATGACGAAATCCGCTTGTTCTTGGAAGAACACGAAAAATCATCTAAGAAAGGAGAGTTAAAAGATAAAGGGAAAGCCGGGACAACTCATTTGCAGCAACCAGTGTCGGGAGAAGATGAGGCACCCACTGCAAAGGCAAACAAAACCGAAAATGAAGAAGATTCGGGGGTTGAGCAGTCAAAGAAGCAGAGTGATGAAGAAGACCAGGTGGACGAGCAATCGAAGAGGAAGAGTGATGGGGCTGTTGGTGAGGAAGCCTTATCAAAACGGAAGAAGGCGAAAGTTGCCCTTGGCCATCTTCTAACATCGGATGACACACATGAGGACGATGAAGACTCATAA ATGGGAAGGCCTCAAAGAAGGAGCGGAGCCACCGGCGGTGACGATCAACTTCACGCCGCCGCCAGAAACGGCGACTTGAGTTCCGTCATTTCTATTTTGGCATCTAACCCTTCGTCTGTCAATTACAGAGATAAGCACTCCCGGACTCCGTATCCTTATCAAACTTTGGAATATAGACTGCATTTAGCAGCATGGTCTGGACAAGCAGAGGTTATAAACTATCTATGCAAGAACAAGGCCGATGTTGGCGCTGCTGCCATGGATGATATGGCCGCAATACATTTTGCATCTCAGAAGGGACATTTGGAAGTAGTTCGTACTTTGATCTCATGTGGCGGATCGGTAAAAGCTTCTACTCGAAAGGGTATGACCCCACTGCACTATGCCGTGCAAGGTTCGTATTTGGAGCTTGTTAAATACTTAGCAAAGAAAGGTGCAAGTTTGAGTGCTAGAACGAAGGCAGGACAAACCCCTCTTGATTTGGCTAGTAATGACGAAATCCGCTTGTTCTTGGAAGAACACGAAAAATCATCTAAGAAAGGAGAGTTAAAAGATAAAGGGAAAGCCGGGACAACTCATTTGCAGCAACCAGTGTCGGGAGAAGATGAGGCACCCACTGCAAAGGCAAACAAAACCGAAAATGAAGAAGATTCGGGGGTTGAGCAGTCAAAGAAGCAGAGTGATGAAGAAGACCAGGTGGACGAGCAATCGAAGAGGAAGAGTGATGGGGCTGTTGGTGAGGAAGCCTTATCAAAACGGAAGAAGGCGAAAGTTGCCCTTGGCCATCTTCTAACATCGGATGACACACATGAGGACGATGAAGACTCATAA MGRPQRRSGATGGDDQLHAAARNGDLSSVISILASNPSSVNYRDKHSRTPYPYQTLEYRLHLAAWSGQAEVINYLCKNKADVGAAAMDDMAAIHFASQKGHLEVVRTLISCGGSVKASTRKGMTPLHYAVQGSYLELVKYLAKKGASLSARTKAGQTPLDLASNDEIRLFLEEHEKSSKKGELKDKGKAGTTHLQQPVSGEDEAPTAKANKTENEEDSGVEQSKKQSDEEDQVDEQSKRKSDGAVGEEALSKRKKAKVALGHLLTSDDTHEDDEDS
BLAST of Lsi03G015310 vs. Swiss-Prot
Match: Y381_RICFE (Putative ankyrin repeat protein RF_0381 OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2) GN=RF_0381 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.6e-18 Identity = 60/163 (36.81%), Postives = 89/163 (54.60%), Query Frame = 1
BLAST of Lsi03G015310 vs. Swiss-Prot
Match: ANK3_MOUSE (Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 2.4e-17 Identity = 54/149 (36.24%), Postives = 83/149 (55.70%), Query Frame = 1
BLAST of Lsi03G015310 vs. Swiss-Prot
Match: ANK3_RAT (Ankyrin-3 OS=Rattus norvegicus GN=Ank3 PE=1 SV=3) HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17 Identity = 53/149 (35.57%), Postives = 83/149 (55.70%), Query Frame = 1
BLAST of Lsi03G015310 vs. Swiss-Prot
Match: ANK3_HUMAN (Ankyrin-3 OS=Homo sapiens GN=ANK3 PE=1 SV=3) HSP 1 Score: 89.7 bits (221), Expect = 5.3e-17 Identity = 53/149 (35.57%), Postives = 83/149 (55.70%), Query Frame = 1
BLAST of Lsi03G015310 vs. Swiss-Prot
Match: TNKS1_MOUSE (Tankyrase-1 OS=Mus musculus GN=Tnks PE=1 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16 Identity = 57/159 (35.85%), Postives = 78/159 (49.06%), Query Frame = 1
BLAST of Lsi03G015310 vs. TrEMBL
Match: A0A0A0LFZ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G823650 PE=4 SV=1) HSP 1 Score: 441.0 bits (1133), Expect = 1.0e-120 Identity = 243/278 (87.41%), Postives = 254/278 (91.37%), Query Frame = 1
BLAST of Lsi03G015310 vs. TrEMBL
Match: B9MUD5_POPTR (Ankyrin repeat family protein OS=Populus trichocarpa GN=POPTR_0001s01270g PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 2.9e-70 Identity = 160/273 (58.61%), Postives = 196/273 (71.79%), Query Frame = 1
BLAST of Lsi03G015310 vs. TrEMBL
Match: A9PD93_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1) HSP 1 Score: 272.3 bits (695), Expect = 6.4e-70 Identity = 159/273 (58.24%), Postives = 196/273 (71.79%), Query Frame = 1
BLAST of Lsi03G015310 vs. TrEMBL
Match: I1J838_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_01G149900 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69 Identity = 164/275 (59.64%), Postives = 197/275 (71.64%), Query Frame = 1
BLAST of Lsi03G015310 vs. TrEMBL
Match: A0A0B2S9A4_GLYSO (Putative ankyrin repeat protein OS=Glycine soja GN=glysoja_003480 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 1.9e-69 Identity = 164/275 (59.64%), Postives = 197/275 (71.64%), Query Frame = 1
BLAST of Lsi03G015310 vs. TAIR10
Match: AT4G19150.1 (AT4G19150.1 Ankyrin repeat family protein) HSP 1 Score: 233.0 bits (593), Expect = 2.2e-61 Identity = 143/272 (52.57%), Postives = 174/272 (63.97%), Query Frame = 1
BLAST of Lsi03G015310 vs. TAIR10
Match: AT2G03430.1 (AT2G03430.1 Ankyrin repeat family protein) HSP 1 Score: 79.0 bits (193), Expect = 5.2e-15 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 1
BLAST of Lsi03G015310 vs. TAIR10
Match: AT3G24530.1 (AT3G24530.1 AAA-type ATPase family protein / ankyrin repeat family protein) HSP 1 Score: 74.7 bits (182), Expect = 9.9e-14 Identity = 53/178 (29.78%), Postives = 82/178 (46.07%), Query Frame = 1
BLAST of Lsi03G015310 vs. TAIR10
Match: AT1G07710.1 (AT1G07710.1 Ankyrin repeat family protein) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-12 Identity = 51/157 (32.48%), Postives = 82/157 (52.23%), Query Frame = 1
BLAST of Lsi03G015310 vs. TAIR10
Match: AT3G09890.1 (AT3G09890.1 Ankyrin repeat family protein) HSP 1 Score: 68.2 bits (165), Expect = 9.3e-12 Identity = 48/165 (29.09%), Postives = 83/165 (50.30%), Query Frame = 1
BLAST of Lsi03G015310 vs. NCBI nr
Match: gi|659085304|ref|XP_008443349.1| (PREDICTED: tankyrase-2 [Cucumis melo]) HSP 1 Score: 442.6 bits (1137), Expect = 5.1e-121 Identity = 243/278 (87.41%), Postives = 254/278 (91.37%), Query Frame = 1
BLAST of Lsi03G015310 vs. NCBI nr
Match: gi|449437799|ref|XP_004136678.1| (PREDICTED: ankyrin-3 [Cucumis sativus]) HSP 1 Score: 441.0 bits (1133), Expect = 1.5e-120 Identity = 243/278 (87.41%), Postives = 254/278 (91.37%), Query Frame = 1
BLAST of Lsi03G015310 vs. NCBI nr
Match: gi|566146541|ref|XP_006368284.1| (ankyrin repeat family protein [Populus trichocarpa]) HSP 1 Score: 273.5 bits (698), Expect = 4.1e-70 Identity = 160/273 (58.61%), Postives = 196/273 (71.79%), Query Frame = 1
BLAST of Lsi03G015310 vs. NCBI nr
Match: gi|118484962|gb|ABK94346.1| (unknown [Populus trichocarpa]) HSP 1 Score: 272.3 bits (695), Expect = 9.2e-70 Identity = 159/273 (58.24%), Postives = 196/273 (71.79%), Query Frame = 1
BLAST of Lsi03G015310 vs. NCBI nr
Match: gi|356496455|ref|XP_003517083.1| (PREDICTED: putative ankyrin repeat protein RF_0381 [Glycine max]) HSP 1 Score: 270.8 bits (691), Expect = 2.7e-69 Identity = 164/275 (59.64%), Postives = 197/275 (71.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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