Lsi03G011090 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G011090
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionRING/FYVE/PHD zinc finger-containing protein, putative
Locationchr03 : 21235701 .. 21240361 (+)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGAAGTGTTTGTATATGTGGAACAGTTTCAATTTCAAACGTCCTACGATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATCAAGGTAACACCAAATTTTCTAAACCCATCAATTTTTTCTTCTTCTTCTTCTTCGAGTTTTGAATTTGATTTGGTTTTTTATTTCTGGGTTTTTCTTTTTCAGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGGTTCGATTACTTTTTTCTTTTAATAATTATTTTTCTTTCTGATTTTTGAGTTTCTGGGTCGATTTTTTTGTACGAAATCGGAAGTGGGTCTTCGTTGATTTTGAATTTTGGAGTCTCTAAACTTGTGTTCTGGGGCTCTGTAATCGGTTTCTTCTCTGCTCTGTTTTTTAGGATATGATTTTAATCTATGAAGATTTAATAAAATTAAAAAAAAAAAAAAAAAAATTGGGAAAGGGGAAAGAAGTTTTGGGTATGTAATCCTATGGGATTCTTAGACAGTGGAATTCCTCTTTTTCTTTGAGTTCAAGTCTCTCTCTGTTCCTAAAGTTGACCTTTCAAACTCCCATAAAGTTGAGTTATTTTGCTTCTATAACATTTTATTTTATTTACAATTTTAATCTTAATACTACTCTTTATTTTTTCCCCCCCTAAAGATTACTGTTTCAATTTAATGAAAGATTTTAATGCGTTATTTAATGGAAACTGGACATTAACAGGTATTTTGTTAAAAGGAAAACAATTCAACTTTAAGAACAGTAAATTGGAAATTTCAGTTTAGAGTTGTAATACTTGGGGAAAAAATACATTAAATACTAAATGTTTTTTTTTTATTATTATTATTAATTTGCGTTTAGAAATTTTAAATAAATAAGAGTCTATCGAATAAACAATATTTAAATCTTTTATGTTGGTCACAAGTCTTCTGACTACTCCACGTACTGTTTTGAATTTATTATATATATATTTTAATTTTCAAAATGAAGAAAGAAATCAAGAATATAAAAAGATATATTTTCTTAATTCTCTCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGTATTTCTTTTATTTTCCCTGTTACTTTATATATATATATATTGAGAGAGAGAGAAAACATACGTTGTTTCTATCTTCTCATTTGGTTTATTCATTTTAAAATATTACACTTTTACTTATAGATTTATTTTGATTTTGATTTTATTTTTAATTTTTAAAATGTTATATTATATCTTAAATTTTAAATTAGGTTAATATTTCTATTTGGCTCCTAAATTTCAAATTTTCAAAATTTACAACTTACAATTTGATTTTGCTCACTATATTAATTAATTTAAAAGAATTATAATTAATTAATTTTCATTAATTTTCTTCCATCACTATTAATAAAATATCAATTTGTAGTTATTTTTATTTAATTAACTTGAATTTAACGTTAAAAAGCAAAGTAAATTTGCTTTAAAAAAAATAGTAAACATTAGCAAAACTTCGGATTTTAAAGGTAAATTATTGAAACCAAATGAATTCATGGGCGAAAATGTAAACATTTTAAAATTCAGGACTAAACTTATGTTAAAATTAAAACTTATAATAAATAGAAATTAGGTCCAAAACACACTAAAAAGGTTTTTTTTTCTTTTCTTTTTTTTCAAAATTTTTTAATTTCAATGTGCTCCCCAGACTGTACTGCGATGAAAATTGCGAAATTTCTTAAAGCACGAGCCGGACATGCTTTACAGCCAATTCATCGGCTCTGAGGAATTAAAATAAAATAAAATAGAATTGAATTAATAAACGGAGATGGAAAATAAAAATATATATACACGATTTGGTTGACAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGGACTCCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCGTAAGTTATTTTTTAATCAAGTCAATGAATCTCCTCTGCCCTTTTTCTCGCTTTCTTCTAATAGATTCTAACAAATGCGATTAGGGAATGTACCTGAAAATATTTAATTTTAAGTTACATCTTAGGTTCATGTTTAATAAATTCTCTTTAAATTTTTGAAAAATGTGGAGTAAGAACTTTGAATTTTATGTTTAATGTATGAATGGGTGTAACTGATCATAGACTAGATCTAGTACAGAAAATTGAATAAGCTCAAAGGCTTACACAACATTAAAAATCATCCTTTGCAAATAAATAAATAAAAACATTAAAAATCACACCTAACCTAATTTGAACTTTTGCTCTGTTTTTTTCTTTTTAAAAAATTAATAATTCACTCGTCAAATTGATTTTTGACTTATGAGTAGTGTTGAAATTATATTGAAAAAGGTTAGTGTGTCCAAGCCACAAATAACCTCATCTATTATCCAAATTCCCAACTCATCACCAAAATTCATAAACCCAACCTAACAAAAACATAATAATAATAATAATAATAAGGAAAATAATAAAGAAATTTTTTTAAAAAAAAAAAAAAAAAGTCCAACTATTTATAGAAAATAGCAAAAAAAAAAAAATACTGATGGACATTGATAGACTTCTATTATTTCTATCAGGAGTAGACTTCTATCATGCTCTATTACAATTATTTAAAAATTTTGCTATTTTGTATAAATAGTTTTTCTTATTTTTTATTTTTTATTTTTAAGAATTTTCCTAATAATAGTACCTACAGAGATAATTTTATCCTACCATTTGAAATGTTCCAGTCTCACTATAATTTTTTAAATAATAATTTTCATCAAAAGTATGAGATTAAATTGTTACTTTGATGATGGAAATGTTTTTCGTTTTTTTATTTTTTTATTTTTTTGAAAAAGTAGATAAATTTAAAACTCAATTGTGATAGGATAGTTAAATAATTATGGGAGAAGAAGAATTGAACAGACGGTGAATGAAAAAGGAAGGCTTTATAATTTCCGTAAGCATTGAAATGAGTAGGGGTTGTATTGGTGCGAAGCCCATTATATGAACAAAGCCTGATTGCTACATTATATCATAAAAATAAAATCTAAGTGGGTGTAATTTACCACTACATAATTGGAAATCATTATGCCAAACACTAACTTCATTATTTTTTCTAATTCCACCCACTATTATATGTTAAATTTATTTATTTATTTAGTAATTTTAACTTAACTGGTCTTTTTTATTTAATATAAATGTCTAAAAGGTGAAATTTCTTGGTGGGGTTGGCTTGGCTATCATTGAAACCTTACTCAATTTAAAACTATATTGTAAAAATAATATTAATAATAATAATATAATGTAGCTCACCAACCCAACAAATAAGGGTTAGCCCCTAGCAGCCTACCATCACTTTCCTCAGCTACTATTTCTTTTTTCCCTAAAAATTTTCAAAAAAATAATTTTACCCTTTTGATACTAAGATTCCCTTATGACTTTATAAAAGTTCACATTTGTATTTTCATTTTATTTTATGCAGTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGAGTACTCGACTCGATTTGATTCAATTCGGTCTATGTTCGAGAGCAATATTTTGGGCAAATTACAAAAGTTACCCTTGAAAGTATGGTGGTAGTTGCAATTACACTCTCAAACTTATAATAGTTATAAAAATTGGACCCTCAAACGATAAAAATTGAATCTTCAAACTTAAACAATTGTTACAATTTCTACAAGCATGTAGGTTCGAGGGTTCAATTTTAACATTTATATAAGTTTAAAGGCTCAATTTTTATTATTAAAAGTTTGAGGGTATAATTGCAACTAACCACTCGTTGCCCTATTATTTTTAAGTCAGTTACAGGAGGAAGATATACTGTAATTAAGTGTTTTGTCGTGTGTATTTGTTTTAGGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGTGAGTTTTTTTTTTCTTTTTGTTTTGAAAGCCAAGAGAAGGGGAAAAAGTTTCCATGGTTGACTGAAAGTTTTTTGTTATTGTGTTTGAAATAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAAGCTTTATACAGACAATCATTATTTGTTACATTTTTTTTTTTTTAAAAAAAAAGAATTATTTGAACTAACTCAACACATCAAATATTCTTCGTTTTGTCAATAATTTTTCTCTTGATTCAATGTAATTTTATGTCAATAATTGAAAAAGGTCCTTTTTTTTTTCAATCTGTGTAAAAATTTACTCCAGATCAGATTGTAATATTGAAGGGAAAATTTTCAATTTTTTAATATTGTACCTAAATGAGAGTGGCAAATGTTATTCATAA

mRNA sequence

ATGGGAGAATTTCAATTTCAAACGTCCTACGATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATCAAGGTAACACCAAATTTTCTAAACCCATCAATTTTTTCTTCTTCTTCTTCTTCGAGTTTTGAATTTGATTTGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGGACTCCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAAGCTTTATACAGACAATCATTATTTGTTACATTTTTTTTTTTTTAAAAAAAAAGAATTATTTGAACTAACTCAACACATCAAATATTCTTCGTTTTGTCAATAATTTTTCTCTTGATTCAATGTAATTTTATGTCAATAATTGAAAAAGGTCCTTTTTTTTTTCAATCTGTGTAAAAATTTACTCCAGATCAGATTGTAATATTGAAGGGAAAATTTTCAATTTTTTAATATTGTACCTAAATGAGAGTGGCAAATGTTATTCATAA

Coding sequence (CDS)

ATGGGAGAATTTCAATTTCAAACGTCCTACGATGTCTCACGCTGTAGGATTTGCCACGAAGAAGAATTCGAAAGCCCCTTCCAACTTGAAGCCCCCTGTTCTTGTTCAGGTACCATCAAGGTAACACCAAATTTTCTAAACCCATCAATTTTTTCTTCTTCTTCTTCTTCGAGTTTTGAATTTGATTTGTTCGCTCACAGAGATTGTATTCAGAGATGGTGCAGCGAAAAAGGCAGCACAGTTTGTGAAATTTGTCTCCAGAATTACGAACCTGGATATACTGCACCTTCTAAGAAGCCTCAACACGCCGATCCAGGTGTCACCATTAGGGATAGTGTGGAAATCCCGAGAAGCGAGGACGAAGAGGCGGCAGAGCCGGCATCGCCACCCGATGACGGCGGCGCGTCGGACTCCGGCTGCTCCACCACCGCTGACCGCGGTGCCTCCTGCTGTAAATCCGTCGCTCTCACCTTTACTTTAGTGTTGTTGGTGAGACATTTCTATGAAGTGGTTGCTGTTGGCACTGCAGAGTATCCATTTACACTTGCCACTGTGCTTATTTTAAGAGCAAGTGGAATTATTTTTCCTATGTACGTGATAATTCGAATGATCACTGCCATTCAAAACAGTGTTCGTCAAAATCGGTATCAGTATCAATATCGGAATCATGAGGATTCTGATGATGATGATGATATTTCAAGCTTTGAAGATGATGATAGAAGGCTGCATCATATTGTCTAA

Protein sequence

MGEFQFQTSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRRLHHIV
Homology
[Close]
BLAST of Lsi03G011090 vs. TrEMBL
Match: A0A0A0KT99_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003640 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 6.0e-104
Identity = 203/246 (82.52%), Postives = 209/246 (84.96%), Query Frame = 1 

Query: 3   EFQFQTSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFD 62
           EF FQTSYDVSRCRICHEEEFESP QLEAPCSCSGTIK                      
Sbjct: 10  EFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIK---------------------- 69

Query: 63  LFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADP-GVTIRDSVEIPRSEDE 122
            FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP HADP  VT+RD VEIPRSEDE
Sbjct: 70  -FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDE 129

Query: 123 EAAEPASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFT 182
           E AEPAS PDD  AS S CSTTADRGASCCKSVALTFTLVLLVRHFY+VVAVGTA+YPFT
Sbjct: 130 ETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFT 189

Query: 183 LATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDS-DDDDDISSFEDDDR 242
           LATVLILRASGIIFPMYVIIR +TAIQNSVR+NRYQY+YRNHEDS DDDDDISSFEDDDR
Sbjct: 190 LATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDR 232

Query: 243 RLHHIV 247
           RLHHIV
Sbjct: 250 RLHHIV 232

[Close]
BLAST of Lsi03G011090 vs. TrEMBL
Match: A0A059AX87_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01050 PE=4 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 6.8e-55
Identity = 126/245 (51.43%), Postives = 158/245 (64.49%), Query Frame = 1 

Query: 8   TSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHR 67
           +S  V  CRICH+ EFES   LEAPC CSGT+K                       +AHR
Sbjct: 13  SSSPVPYCRICHDAEFESEQSLEAPCGCSGTVK-----------------------YAHR 72

Query: 68  DCIQRWCSEKGSTVCEICLQNYEPGYTA-PSKKPQHADPGVTIRDSVEIPRSEDE-EAAE 127
           DCIQRWC EKGST CEICLQNYEPGYTA PSKK Q  +  VTIRDS+++PR+E E ++  
Sbjct: 73  DCIQRWCDEKGSTTCEICLQNYEPGYTAAPSKKSQLIEAAVTIRDSLQVPRAEPEPQSPT 132

Query: 128 PASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATV 187
             +P     A  S C++ ADRGA+CC+++ALTFT+ LL+RH  +V++    EYPF L TV
Sbjct: 133 SLAPGAPIEAVYSECASAADRGAACCRALALTFTVFLLLRHMLDVLSGRPEEYPFALVTV 192

Query: 188 LILRASGIIFPMYVIIRMITAIQNSVRQNRY----QYQYRNHEDSDDDDDISSFEDDDRR 247
           L+LR SGI+ PMY++IR ITA+QNS+RQ  +    +      ED DDDDD    +D DRR
Sbjct: 193 LVLRMSGIVVPMYILIRTITAVQNSIRQRYHVVGDETLNDEEEDEDDDDDEDDDDDSDRR 234

[Close]
BLAST of Lsi03G011090 vs. TrEMBL
Match: W9QCY6_9ROSA (E3 ubiquitin-protein ligase MARCH2 OS=Morus notabilis GN=L484_009758 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.3e-53
Identity = 122/232 (52.59%), Postives = 153/232 (65.95%), Query Frame = 1 

Query: 9   SYDVSRCRICHEEEFESPFQ-LEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHR 68
           SY VS CRICHEEEFE   Q LEAPC+CSGT+K                       FAHR
Sbjct: 14  SYGVSYCRICHEEEFEDSHQTLEAPCACSGTVK-----------------------FAHR 73

Query: 69  DCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPA 128
           DCIQRWC+EKG+T CEICLQNYEPGYTAP K     +  VTIRDS++IPR E   +    
Sbjct: 74  DCIQRWCNEKGNTTCEICLQNYEPGYTAPPKISPLIEAAVTIRDSLQIPRREQRPSIVAL 133

Query: 129 SPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLI 188
           +  ++   S+S C++ ADR ASC +S+AL  T++LLVRH Y V+  G  +YPFTL T++I
Sbjct: 134 A--EENEYSESQCTSAADRSASCFRSLALLVTVILLVRHLYAVLTGGAEDYPFTLLTIII 193

Query: 189 LRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDD 240
           LRASGII PMY ++R ITA+QNS R        R ++DSDDDDD++S  D++
Sbjct: 194 LRASGIILPMYALVRTITALQNSAR--------RRYQDSDDDDDLASDGDEE 212

[Close]
BLAST of Lsi03G011090 vs. TrEMBL
Match: U5FTE5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11700g PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.7e-53
Identity = 125/250 (50.00%), Postives = 159/250 (63.60%), Query Frame = 1 

Query: 7   QTSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAH 66
           QTS  +  CRICHE EFES   LEAPC+CSGT+K                       FAH
Sbjct: 12  QTSCAIPHCRICHEAEFESCKSLEAPCACSGTVK-----------------------FAH 71

Query: 67  RDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSE----DEE 126
           RDCIQRWC+EKG+T CEICLQNYEPGY+APS+K +  +P +TIRDS+EIPR E    ++E
Sbjct: 72  RDCIQRWCNEKGNTTCEICLQNYEPGYSAPSRKCEMIEP-MTIRDSLEIPRREHDPENQE 131

Query: 127 AAEPASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTL 186
               A     G    S CS+ ADR ASCC+ +ALTFT+++L+RH +  +  GT +YPFTL
Sbjct: 132 LGGIAERATAGAEEYSHCSSAADRSASCCRFLALTFTVLMLLRHLFATLTGGTEDYPFTL 191

Query: 187 ATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISS------FE 246
            T+LILRASGI+FPMY++ R I A+  S+R    QYQ     DS+DD+D +S       E
Sbjct: 192 VTLLILRASGILFPMYIVFRTIAAVHKSIRS---QYQ-----DSEDDEDYTSNSDGDEGE 229

[Close]
BLAST of Lsi03G011090 vs. TrEMBL
Match: V7BH38_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G214700g PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 4.1e-52
Identity = 119/228 (52.19%), Postives = 151/228 (66.23%), Query Frame = 1 

Query: 12  VSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQ 71
           +SRCRICHEEEFES   LEAPC+CSGT+K                       FAHRDCIQ
Sbjct: 26  ISRCRICHEEEFESTKTLEAPCACSGTVK-----------------------FAHRDCIQ 85

Query: 72  RWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPD 131
            WC+EKG+T CEICLQ YEPGYTA  KK Q AD  +TIRDS++I  +E     EP +   
Sbjct: 86  TWCNEKGNTTCEICLQQYEPGYTAVQKKSQIADAAMTIRDSLQISMTE----REPLNTSI 145

Query: 132 DGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRAS 191
             G + S C+  ADR A+CC+S+AL FTL+LLVRH + +++ G  +YPFT+ TV +LRAS
Sbjct: 146 IEGNNYSECTYAADRSAACCRSLALAFTLILLVRHLFALLSDGMEDYPFTILTVFLLRAS 205

Query: 192 GIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDD 240
           GII PMY+II+ I AI N+++  RY     +H+DSDDD  IS  ED++
Sbjct: 206 GIIIPMYIIIKTIGAIHNNIK--RY-----HHQDSDDDSSISDGEDEE 219

[Close]
BLAST of Lsi03G011090 vs. TAIR10
Match: AT1G02610.1 (AT1G02610.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 176.4 bits (446), Expect = 2.2e-44
Identity = 104/231 (45.02%), Postives = 140/231 (60.61%), Query Frame = 1 

Query: 13  SRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQR 72
           +RCRICHEEE ES F  EAPCSCSGTIK                       FAHRDCIQR
Sbjct: 18  NRCRICHEEEAESYF--EAPCSCSGTIK-----------------------FAHRDCIQR 77

Query: 73  WCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPDD 132
           WC EKG+T+CEICLQ Y+PGYT  SK  +  +  VTIRD++ I R E+          + 
Sbjct: 78  WCDEKGNTICEICLQEYKPGYTTTSKPSRFIETAVTIRDNLHIMRRENGRRRRNRRLVNR 137

Query: 133 GGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRASG 192
             +    C++  DRGASCC+ +AL F+++LL++H ++ V  GT EYP+T+ TVL L+A G
Sbjct: 138 EESDFQECNSGVDRGASCCRYLALIFSVILLIKHAFDAV-YGTEEYPYTIFTVLTLKAIG 197

Query: 193 IIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRRLH 244
           I+ PM VIIR ITAIQ S+   RYQ      +    +++    E+++++ H
Sbjct: 198 ILLPMLVIIRTITAIQRSL---RYQILESEEDTLSSEEEDHGLEEEEQQQH 219

[Close]
BLAST of Lsi03G011090 vs. TAIR10
Match: AT4G02075.1 (AT4G02075.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 162.2 bits (409), Expect = 4.2e-40
Identity = 103/235 (43.83%), Postives = 143/235 (60.85%), Query Frame = 1 

Query: 12  VSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQ 71
           ++RCRICHEEE ES F  E PC+CSGT+K                       FAHR+CIQ
Sbjct: 17  ITRCRICHEEEEESFF--EVPCACSGTVK-----------------------FAHRNCIQ 76

Query: 72  RWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPD 131
           RWC+EKG+T CEICLQ Y+ GYTA  K+ +  +  VTIR +    R      +   S   
Sbjct: 77  RWCNEKGNTTCEICLQVYKDGYTAVLKQSKLIEQEVTIRVNGRRRRRSRRLVSIAES--- 136

Query: 132 DGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRAS 191
                 S C++ ADRGAS C+S+  T ++ LL++H ++V+  GT EYPF++ TVL L+A 
Sbjct: 137 ----DISQCNSVADRGASFCRSLTFTLSVFLLMKHTFDVI-YGTEEYPFSVFTVLTLKAI 196

Query: 192 GIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHED---SDDDDDISSFEDDDRRLH 244
           GI+ PM++IIR I+ IQ ++R+ R+QY     ED   SDDDDD+   ED++++ H
Sbjct: 197 GILLPMFIIIRTISTIQKTLRR-RHQYPESEEEDRLSSDDDDDLEE-EDEEQQQH 216

[Close]
BLAST of Lsi03G011090 vs. TAIR10
Match: AT2G01275.1 (AT2G01275.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 103.6 bits (257), Expect = 1.8e-22
Identity = 73/231 (31.60%), Postives = 108/231 (46.75%), Query Frame = 1 

Query: 12  VSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQ 71
           ++ CRICH+E+ +S   +E PCSCSG++K                       +AHR C+Q
Sbjct: 56  MAECRICHDEDLDS--NMETPCSCSGSVK-----------------------YAHRRCVQ 115

Query: 72  RWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPD 131
           RWC+EKG T CEIC Q ++P YTAP    +     +  R +  I + E          P 
Sbjct: 116 RWCNEKGDTTCEICHQEFKPDYTAPPPLLELGHVPLHFRGNWGISQREHRFI---TVVPA 175

Query: 132 DGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILRAS 191
           D    D     ++     CC+S+ L F  +L++RH   +V  G+  + F L T+L LR  
Sbjct: 176 DSTFIDQPYPLSSTTSFICCRSLVLIFMALLILRHTLPLVLTGSNLHVFPLFTLLFLRIL 235

Query: 192 GIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRRL 243
           GI+ P+YV+ + +   +   R            D+   DD S  E D  RL
Sbjct: 236 GIMLPIYVVTKAVATCRRHSRT----------LDTSPSDDSSDEETDSWRL 248

[Close]
BLAST of Lsi03G011090 vs. TAIR10
Match: AT5G38070.1 (AT5G38070.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 98.6 bits (244), Expect = 5.7e-21
Identity = 70/206 (33.98%), Postives = 99/206 (48.06%), Query Frame = 1 

Query: 14  RCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQRW 73
           +CRICH+E+ ++   ++ PCSCSGT+K                       FAH +C+QRW
Sbjct: 53  QCRICHDEDEDT--NMDTPCSCSGTLK-----------------------FAHHNCVQRW 112

Query: 74  CSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPA----SP 133
           C+EKG TVCEIC Q Y+PGYTAP +   +    +       I   E  +   P       
Sbjct: 113 CNEKGDTVCEICRQQYKPGYTAPRQLFHYTGISMNFGSDWGI---EGLDLRNPYFLTWGD 172

Query: 134 PDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILR 193
            DD     S  S T+     CC+ +AL F L+L +RH   V+  G  ++  TL  + ++R
Sbjct: 173 ADDDHDLYSFHSPTS---LICCRLIALLFVLLLFLRHSLPVLLGGVDDFSITLLMLPLVR 226

Query: 194 ASGIIFPMYVIIRMITAIQNSVRQNR 216
             GI+   YV  +    IQ   RQ R
Sbjct: 233 TLGILLIAYVFFKSFIVIQR-CRQER 226

[Close]
BLAST of Lsi03G011090 vs. TAIR10
Match: AT5G62460.1 (AT5G62460.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 3.1e-19
Identity = 65/200 (32.50%), Postives = 97/200 (48.50%), Query Frame = 1 

Query: 15  CRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQRWC 74
           CRIC EE+  S   LE+PCSCSG++K                       +AHR C+QRWC
Sbjct: 78  CRICQEED--SVKNLESPCSCSGSLK-----------------------YAHRKCVQRWC 137

Query: 75  SEKGSTVCEICLQNYEPGYTAPSKKPQH---ADPGVTIRDSVEIPRSEDEEAAEPASPPD 134
           +EKG T CEIC ++Y+PGYTAP   P      D G    + V +  ++    A  A+   
Sbjct: 138 NEKGDTTCEICHKSYQPGYTAPPPPPADDTIIDIGEDWGNGVHLDLNDPRILAMAAAERH 197

Query: 135 DGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVV---AVGTAEYPFTLATVLIL 194
              A     + +   GA+ C+S AL    +LL+RH   +    +    + P     + +L
Sbjct: 198 FFDADYDEYADSNSSGAAFCRSAALILMALLLLRHALNLTNNNSDDEEDDPSAFFFLFML 252

Query: 195 RASGIIFPMYVIIRMITAIQ 209
           RA+G + P Y++   I+ +Q
Sbjct: 258 RAAGFLLPCYIMAWAISILQ 252

[Close]
BLAST of Lsi03G011090 vs. NCBI nr
Match: gi|778689411|ref|XP_011652953.1| (PREDICTED: uncharacterized protein LOC101220948 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 8.6e-104
Identity = 203/246 (82.52%), Postives = 209/246 (84.96%), Query Frame = 1 

Query: 3   EFQFQTSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFD 62
           EF FQTSYDVSRCRICHEEEFESP QLEAPCSCSGTIK                      
Sbjct: 10  EFPFQTSYDVSRCRICHEEEFESPLQLEAPCSCSGTIK---------------------- 69

Query: 63  LFAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADP-GVTIRDSVEIPRSEDE 122
            FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKP HADP  VT+RD VEIPRSEDE
Sbjct: 70  -FAHRDCIQRWCSEKGSTVCEICLQNYEPGYTAPSKKPHHADPPSVTLRDGVEIPRSEDE 129

Query: 123 EAAEPASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFT 182
           E AEPAS PDD  AS S CSTTADRGASCCKSVALTFTLVLLVRHFY+VVAVGTA+YPFT
Sbjct: 130 ETAEPASSPDDDSASVSACSTTADRGASCCKSVALTFTLVLLVRHFYDVVAVGTADYPFT 189

Query: 183 LATVLILRASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDS-DDDDDISSFEDDDR 242
           LATVLILRASGIIFPMYVIIR +TAIQNSVR+NRYQY+YRNHEDS DDDDDISSFEDDDR
Sbjct: 190 LATVLILRASGIIFPMYVIIRTVTAIQNSVRRNRYQYRYRNHEDSDDDDDDISSFEDDDR 232

Query: 243 RLHHIV 247
           RLHHIV
Sbjct: 250 RLHHIV 232

[Close]
BLAST of Lsi03G011090 vs. NCBI nr
Match: gi|645259093|ref|XP_008235196.1| (PREDICTED: uncharacterized protein LOC103334049 isoform X2 [Prunus mume])

HSP 1 Score: 226.9 bits (577), Expect = 3.9e-56
Identity = 126/237 (53.16%), Postives = 158/237 (66.67%), Query Frame = 1 

Query: 15  CRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQRWC 74
           CRICHEEEF S   +EAPC+CSGT+K                       FAHR+CIQRWC
Sbjct: 22  CRICHEEEFGSCESMEAPCACSGTVK-----------------------FAHRNCIQRWC 81

Query: 75  SEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAA-----EPASP 134
           +EKG+T CEICLQ+YEPGYTAP KK Q  D  VTIRDSV++PR + E  +     E   P
Sbjct: 82  NEKGNTTCEICLQSYEPGYTAPPKKSQVDDTAVTIRDSVQVPRRDQEPRSPRLDLERVQP 141

Query: 135 PDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILR 194
            ++  +S S CS+ ADR ASCC+S+AL FT+VLLVRH + V+     +YPFTL TVLILR
Sbjct: 142 IENVYSSQSQCSSAADRSASCCRSLALLFTVVLLVRHLFVVLTGSDEDYPFTLLTVLILR 201

Query: 195 ASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDDRRLHHIV 247
           ASGII PMY++IR ITAIQNSVRQ +Y+Y Y++ +D   D   +  E+++   HH V
Sbjct: 202 ASGIILPMYILIRTITAIQNSVRQ-QYRYHYQDSDDETSDPGDNQEEEEEEDQHHSV 234

[Close]
BLAST of Lsi03G011090 vs. NCBI nr
Match: gi|645259090|ref|XP_008235195.1| (PREDICTED: uncharacterized protein LOC103334049 isoform X1 [Prunus mume])

HSP 1 Score: 224.9 bits (572), Expect = 1.5e-55
Identity = 129/240 (53.75%), Postives = 158/240 (65.83%), Query Frame = 1 

Query: 15  CRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQRWC 74
           CRICHEEEF S   +EAPC+CSGT+K                       FAHR+CIQRWC
Sbjct: 22  CRICHEEEFGSCESMEAPCACSGTVK-----------------------FAHRNCIQRWC 81

Query: 75  SEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAA-----EPASP 134
           +EKG+T CEICLQ+YEPGYTAP KK Q  D  VTIRDSV++PR + E  +     E   P
Sbjct: 82  NEKGNTTCEICLQSYEPGYTAPPKKSQVDDTAVTIRDSVQVPRRDQEPRSPRLDLERVQP 141

Query: 135 PDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLILR 194
            ++  +S S CS+ ADR ASCC+S+AL FT+VLLVRH + V+     +YPFTL TVLILR
Sbjct: 142 IENVYSSQSQCSSAADRSASCCRSLALLFTVVLLVRHLFVVLTGSDEDYPFTLLTVLILR 201

Query: 195 ASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDD---DDDISSFEDDDRRLHHIV 247
           ASGII PMY++IR ITAIQNSVRQ   QY+Y   +DSDD   D   +  E+++   HH V
Sbjct: 202 ASGIILPMYILIRTITAIQNSVRQ---QYRYHYQQDSDDETSDPGDNQEEEEEEDQHHSV 235

[Close]
BLAST of Lsi03G011090 vs. NCBI nr
Match: gi|702435376|ref|XP_010069862.1| (PREDICTED: uncharacterized protein LOC104456706 [Eucalyptus grandis])

HSP 1 Score: 222.2 bits (565), Expect = 9.7e-55
Identity = 126/245 (51.43%), Postives = 158/245 (64.49%), Query Frame = 1 

Query: 8   TSYDVSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHR 67
           +S  V  CRICH+ EFES   LEAPC CSGT+K                       +AHR
Sbjct: 13  SSSPVPYCRICHDAEFESEQSLEAPCGCSGTVK-----------------------YAHR 72

Query: 68  DCIQRWCSEKGSTVCEICLQNYEPGYTA-PSKKPQHADPGVTIRDSVEIPRSEDE-EAAE 127
           DCIQRWC EKGST CEICLQNYEPGYTA PSKK Q  +  VTIRDS+++PR+E E ++  
Sbjct: 73  DCIQRWCDEKGSTTCEICLQNYEPGYTAAPSKKSQLIEAAVTIRDSLQVPRAEPEPQSPT 132

Query: 128 PASPPDDGGASDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATV 187
             +P     A  S C++ ADRGA+CC+++ALTFT+ LL+RH  +V++    EYPF L TV
Sbjct: 133 SLAPGAPIEAVYSECASAADRGAACCRALALTFTVFLLLRHMLDVLSGRPEEYPFALVTV 192

Query: 188 LILRASGIIFPMYVIIRMITAIQNSVRQNRY----QYQYRNHEDSDDDDDISSFEDDDRR 247
           L+LR SGI+ PMY++IR ITA+QNS+RQ  +    +      ED DDDDD    +D DRR
Sbjct: 193 LVLRMSGIVVPMYILIRTITAVQNSIRQRYHVVGDETLNDEEEDEDDDDDEDDDDDSDRR 234

[Close]
BLAST of Lsi03G011090 vs. NCBI nr
Match: gi|1009148052|ref|XP_015891739.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 219.9 bits (559), Expect = 4.8e-54
Identity = 124/242 (51.24%), Postives = 156/242 (64.46%), Query Frame = 1 

Query: 12  VSRCRICHEEEFESPFQLEAPCSCSGTIKVTPNFLNPSIFSSSSSSSFEFDLFAHRDCIQ 71
           +S CRICHE EFE+   LEAPCSCSGT+K                       FAHRDCIQ
Sbjct: 17  ISYCRICHEGEFENSNSLEAPCSCSGTVK-----------------------FAHRDCIQ 76

Query: 72  RWCSEKGSTVCEICLQNYEPGYTAPSKKPQHADPGVTIRDSVEIPRSEDEEAAEPASPPD 131
           RWC+EKG+T CEICLQNYEPGYTA  KK Q  D  VTIR+S++IPR E E  +   +   
Sbjct: 77  RWCNEKGNTTCEICLQNYEPGYTALPKKSQLIDAAVTIRESLQIPRREQEPLSPRLASLA 136

Query: 132 DGGA---SDSGCSTTADRGASCCKSVALTFTLVLLVRHFYEVVAVGTAEYPFTLATVLIL 191
           +G +    DS C++ ADR ASCC+S+AL  T++LLVRH + V   G  +YPFTL T++IL
Sbjct: 137 EGVSLENDDSECNSAADRSASCCRSLALAITVILLVRHLFAVFNGGAEDYPFTLLTIIIL 196

Query: 192 RASGIIFPMYVIIRMITAIQNSVRQNRYQYQYRNHEDSDDDDDISSFEDDD----RRLHH 247
           RASGII PMY++IR ITA+QNS+R        R+H    DD+D S+F+ D+    +R  H
Sbjct: 197 RASGIILPMYLLIRTITALQNSIR--------RHHTQDSDDEDSSTFDGDEEGERQRQQH 227

The following BLAST results are available for this feature:
BLAST of Lsi03G011090 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi03G011090 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KT99_CUCSA6.0e-10482.52Uncharacterized protein OS=Cucumis sativus GN=Csa_4G003640 PE=4 SV=1[more]
A0A059AX87_EUCGR6.8e-5551.43Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01050 PE=4 SV=1[more]
W9QCY6_9ROSA1.3e-5352.59E3 ubiquitin-protein ligase MARCH2 OS=Morus notabilis GN=L484_009758 PE=4 SV=1[more]
U5FTE5_POPTR3.7e-5350.00Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s11700g PE=4 SV=1[more]
V7BH38_PHAVU4.1e-5252.19Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_007G214700g PE=4 SV=1[more]
BLAST of Lsi03G011090 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G02610.12.2e-4445.02 RING/FYVE/PHD zinc finger superfamily protein[more]
AT4G02075.14.2e-4043.83 RING/FYVE/PHD zinc finger superfamily protein[more]
AT2G01275.11.8e-2231.60 RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G38070.15.7e-2133.98 RING/FYVE/PHD zinc finger superfamily protein[more]
AT5G62460.13.1e-1932.50 RING/FYVE/PHD zinc finger superfamily protein[more]
BLAST of Lsi03G011090 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778689411|ref|XP_011652953.1|8.6e-10482.52PREDICTED: uncharacterized protein LOC101220948 [Cucumis sativus][more]
gi|645259093|ref|XP_008235196.1|3.9e-5653.16PREDICTED: uncharacterized protein LOC103334049 isoform X2 [Prunus mume][more]
gi|645259090|ref|XP_008235195.1|1.5e-5553.75PREDICTED: uncharacterized protein LOC103334049 isoform X1 [Prunus mume][more]
gi|702435376|ref|XP_010069862.1|9.7e-5551.43PREDICTED: uncharacterized protein LOC104456706 [Eucalyptus grandis][more]
gi|1009148052|ref|XP_015891739.1|4.8e-5451.24PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR022143DUF3675
IPR013083Znf_RING/FYVE/PHD
IPR011016Znf_RING-CH
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G011090.1Lsi03G011090.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011016Zinc finger, RING-CH-typePFAMPF12906RINGvcoord: 15..41
score: 7.
IPR011016Zinc finger, RING-CH-typeSMARTSM00744ringv_2coord: 14..86
score: 3.
IPR011016Zinc finger, RING-CH-typePROFILEPS51292ZF_RING_CHcoord: 7..92
score: 13
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 12..41
score: 1.8E-5coord: 64..90
score: 2.
IPR022143Protein of unknown function DUF3675PFAMPF12428DUF3675coord: 91..204
score: 3.9
NoneNo IPR availablePANTHERPTHR23012:SF93RING/FYVE/PHD ZINC FINGER-CONTAINING PROTEINcoord: 64..246
score: 6.9E-87coord: 5..40
score: 6.9
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 64..90
score: 7.7

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G011090Csa4G003640Cucumber (Chinese Long) v2culsiB275
Lsi03G011090CSPI04G01200Wild cucumber (PI 183967)cpilsiB274
Lsi03G011090Cucsa.096750Cucumber (Gy14) v1cgylsiB111
Lsi03G011090CmaCh14G009290Cucurbita maxima (Rimu)cmalsiB240
Lsi03G011090CmaCh01G002930Cucurbita maxima (Rimu)cmalsiB422
Lsi03G011090CmoCh01G003040Cucurbita moschata (Rifu)cmolsiB409
Lsi03G011090CmoCh14G009540Cucurbita moschata (Rifu)cmolsiB228
Lsi03G011090Cla017363Watermelon (97103) v1lsiwmB240
Lsi03G011090MELO3C017920Melon (DHL92) v3.5.1lsimeB269
Lsi03G011090ClCG10G011360Watermelon (Charleston Gray)lsiwcgB219
Lsi03G011090MELO3C017920.2Melon (DHL92) v3.6.1lsimedB282
Lsi03G011090Cla97C10G194220Watermelon (97103) v2lsiwmbB218
Lsi03G011090Bhi11G001059Wax gourdlsiwgoB292
Lsi03G011090Cp4.1LG03g05160Cucurbita pepo (Zucchini)cpelsiB500
Lsi03G011090Cp4.1LG02g16220Cucurbita pepo (Zucchini)cpelsiB452
Lsi03G011090CsGy4G001090Cucumber (Gy14) v2cgyblsiB257
Lsi03G011090Carg07386Silver-seed gourdcarlsiB699
Lsi03G011090Carg11156Silver-seed gourdcarlsiB748
Lsi03G011090CsaV3_4G001190Cucumber (Chinese Long) v3cuclsiB296
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G011090Bottle gourd (USVL1VR-Ls)lsilsiB091
Lsi03G011090Cucumber (Gy14) v1cgylsiB352
Lsi03G011090Cucurbita maxima (Rimu)cmalsiB350
Lsi03G011090Cucurbita maxima (Rimu)cmalsiB351
Lsi03G011090Cucurbita maxima (Rimu)cmalsiB831
Lsi03G011090Cucurbita maxima (Rimu)cmalsiB832
Lsi03G011090Cucurbita moschata (Rifu)cmolsiB339
Lsi03G011090Cucurbita moschata (Rifu)cmolsiB340
Lsi03G011090Cucurbita moschata (Rifu)cmolsiB817
Lsi03G011090Cucurbita moschata (Rifu)cmolsiB818
Lsi03G011090Cucurbita pepo (Zucchini)cpelsiB115
Lsi03G011090Cucurbita pepo (Zucchini)cpelsiB116
Lsi03G011090Cucurbita pepo (Zucchini)cpelsiB266
Lsi03G011090Wild cucumber (PI 183967)cpilsiB530
Lsi03G011090Cucumber (Chinese Long) v2culsiB516
Lsi03G011090Melon (DHL92) v3.5.1lsimeB240
Lsi03G011090Melon (DHL92) v3.5.1lsimeB252
Lsi03G011090Watermelon (Charleston Gray)lsiwcgB217
Lsi03G011090Watermelon (Charleston Gray)lsiwcgB246
Lsi03G011090Watermelon (97103) v1lsiwmB234
Lsi03G011090Watermelon (97103) v1lsiwmB280
Lsi03G011090Cucumber (Gy14) v2cgyblsiB483
Lsi03G011090Melon (DHL92) v3.6.1lsimedB266
Lsi03G011090Silver-seed gourdcarlsiB064
Lsi03G011090Silver-seed gourdcarlsiB099
Lsi03G011090Silver-seed gourdcarlsiB410
Lsi03G011090Cucumber (Chinese Long) v3cuclsiB550
Lsi03G011090Watermelon (97103) v2lsiwmbB239
Lsi03G011090Watermelon (97103) v2lsiwmbB253
Lsi03G011090Wax gourdlsiwgoB315
Lsi03G011090Wax gourdlsiwgoB343